AT3G17340

Importin-beta N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0011419
Physical Location & Seq
Reverse (-)
5920338 .. 5927037
6700 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G17340.2

Sequence Viewer

Length: 3273 bp
ATGTTCGTCGGCGACGACGACTCAGTTCAGATTGTTCGGCTTCTTGACCAGACGCTTACTTCTATTGATGGCGTTTCTGTCCGCGAGGCGACGGAGGCTCTGGATCTACTGTCTACGAAGCTCCCTCATTTCCCTTATCGTCTTCTCTCCATCGCTTCCGGAAGTGAAAATCCAAGCCTGAAAGTTGCTGCTGCAACATATCTGAAGAATTTTACCAGAAAGAGCACTGGCACTGAAGGGACAATCTCAGAAGTCAGCAAGGAGTTTAAGGATCAGCTCCTCCTAGCTTTGCTTCAGGCAGAGCCTGCAGTTCTTAAAGTCTTACTTGAACTGCTGCACATTGTTGTTGTGTCAGAATTTGTTAGGAAAAATGCATGGCCTAAACTTGTACCGGAGCTGCGCTCTGCTATCGAGAAGAGCAGTTTAATTAGCAGTTCAAACTCTAGCTGGAGTACTGTGAACGCTCTGATGGTATTGCTTACAGTTGTAAAGCCTTTTCAGTACTTCCTGCAACCAAAACTTGCAAAGGAGCCAGTGCCACAACAGCTGGAGAGTATCGCGAGAGAAATTCTAGTACCCTTGGTGTCAGTATTACATCGTCTCATTGACAAGGCTTTGACTACCCATGGATGGGATGAACTGGAATTGGAAAAGACACTCCACATTATTTGCAAATGCCTATACTTTTCAGTGAAGTCCCATATGCCATCTGCTTTGTCACCTCTGCTCGGTTCCTTCTGTCAAGATATGATCAGAATTCTGGACTCCTTGAGTTTTGACTGGAGTGTAACTCCTTCTGATGGGTACTTGATAAGATCGAAAGCTGGAAAAAGAAGTTTGCTCCTCTTTTGCACGCTTGTCAGCCGACATAGAAAATACTCTGATAAATTGGTGCCGGAAATAATAAACTGCTCAATGAAGATTGTCAAACATAGCTCAAACATCGGTAAGCTCGGATGCCTAACTGAGAGAATTATATCACTTGCTTTTGACGTAATTTCACGCGTCATGGAAATTGGCCCTGGATGGAGATTACTTTCACCCCATTTTTCCTTTTTGTTGGACTCCGCAATCTTTCCAGCCCTGGTGCTTAATGAGAGGGACATCTCTGAGTGGGAGGAAGATGCAGATGAATTCATAAGGAAAAACCTTCCATCTGAACTAGAAGAAATTTCTGGGTGGAGGGATGACTTGTTTACAGCCAGGAAAAGCGCTATGAACTTACTTTGTGTCCTTGCCATGTCAAAGGGACCACCAGTATCTACTACAAATACAGCTTCCCCAGCAGCATGTAAGCGGAAGAAAGGTGAAAAGAACAGAGGAAATAACCAAAGATGCATGGGTGATCTACTGGTGCTTCCATTTTTGTCAAAATTTCCTGTGCCTTCGAAGAGTTACAAACTGGATGCTAGTACTTCAGCAGCCTATTTCGGTGTCCTAATGGCATATGGTAGCCTGCAAGAGTTTATCCAAGAACAAAATCCTGAGTATGTGGCATCTTTTGTCCGTACCCGTGTGCTACCCATTTATTCTACACCTGATTGCTCACCTTACTTGGTTGCATCTGCAAATTGGGTACTTGGAGAGCTTGCGTCTTGCCTACCTGAGGAGATGAATGCAGATGTTTTTTCTTCCCTACTAAAGGCATTAGCAATGCCAGATCAGGTGGAGATTTCTTGTTACCCAGTGCGTTTTTCAGCTGCTGGTGGAATAGGTTCCCTACTCGAAAATGAGTACCAACCACCTGAATTGTTGCCGCTTCTTCAGTTTATTACTGGTAAGATTGGTAATGAGGAAGACGAGGACAGCATGTTGTTTCAGCTTCTCAAATCCGTGGTCGAGTCGGGAAATCAAGATATTGCAATGCATATTCCTTACATTGTCTCTTCTCTAGTAAGTAATATGTTGAAGTTTATGCATCCAAGTGAAGATCCATGGTCTCAGGCTATTCTAGGTGGCCTTGAGACATTAGCAGCGATGACTCAGACTTATGAAAGCTCTAAGCCTGAAGCGGATGAGGAGAATAATCAGGCGACTGAAATATGGCTAACTGGTCAAGGCACCATCAGCAAAGCTTTGTCAGCACTTTTACAGCATGCATGGCTGGCAACAGATGTGCCTCCGACTTCATGCATAGATCATTTGTCGACGATGTTGCGGTTCATTGTGATTGCTGCTACTAATTGCAATGTATTTGTGGAGCTCAGATTAACTGATTTACTCATAGTTTGGGCCGATATTCTTGCTAGTTGGAATGGTTGGGAAGAGTCGGAGGACTTATCAGTTTTTGACTGTATAGAAGAAGTTGTGGGTATAAACAATAAATATGGTTTTAGGAGTTTCCTTTTCAGAGATATACCATCCCCTCCAGCCATGCCAGTCCGTCCACGATCTGTTGTAGAATCCATTGGTTCATTTGTCAGCAAAGCCATACTTGAGTATCCGTCGGCCACAAGGAGGGCTTGTTCTTGTGTCCACACATTATTATATGTACCCGACTACTCATCTGACATCGAAGGGGTGGGGAAATCATTGGCGATGGTCTTCGCTGAATCAGCCTTTTCTCATTTTTTAGCATTGCGTGAGAAACCTTGTACATTGTGGAGGCCTCTATTACTGGCAATATCATCATGCTATATCTCCTATTCCGATATTGTGGAAGGCGTTTTAGAGAAAGTGATATCTGGAGGTTTCGAGTTATGGGTATCTTCATTGGCTTTTTCATACTCGCTTACGTGTGATGACAGTCCATCAGTAGTATCGGAAGTAAAACTATATGTGATGACGCTAGTAAAGGTGATCGAGCATCTTTTAGATGTAAGGCACGGGAATGCAACTGATGATTTGGCAAGGAAGTGCTTTGTTTCATTGATGGAGGCTTCTCGAAGGCTAAAGGAAGTGAACGAAGAAACAGACGATGATGAAGATGATGGAGAACCTGGAGAAGAAGAGACAGAATCTGAAGAAACTGATTCAAATGACGAGGATTCCGAGAGCGATGAGTGTGAAGAAACGGAGGAAGAGTTTCTAGAAAGGTATGCCAAAGTTGCAGCAGAATTGGAGGATAGTGAAGTTATTGAAGAGGCGGATGAAGAAGATGATGACCATGAGATTGATTTGGGTTCTCTGAATGAAATCGATCCGCAGAAACTGGTGTTATCATTAATGGAGAAGCATCACCAGAAAGTAATAAATCTCGTACCCTCTGAAGCTATCTCAACCTTTCTCAATTCTTTTCCTATATACACAAGTCTCTTCTCTAAGTGCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04013 map04013
Pfam Domains
Protein Families
IBN_N

Protein Analysis

1090

Amino Acids

121.35

Weight (kDa)

4.71

Isoelectric Point (pI)

51.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 30 - 99 1.8e-08 Importin-beta N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011419)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17340 AT3G17340
fragaria_vesca FvH4_4g21110 FvH4_4g21110 FvH4_4g21110
malus_domestica MD15G1386700.v1.1 MD16G1139700.v1.1
prunus_persica Prupe.1G109100_v2.0.a1
pyrus_communis pycom16g12390
rosa_chinensis RchiOBHm_Chr4g0426661
rosa_laevigata RLG00000007286
rosa_multiflora Rmu_sc0001821.1_g000015
rosa_roxburghii Rroxscaffold_5G00368660
rosa_rugosa Rorug04G0214000 Rorug04G0214100
rosa_samantha Rh4AG269200 Rh4BG275500 Rh4CG290000 Rh4DG272500
rosa_wichuraiana Rw4G023350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 892, 2060
AccI GTMKAC 2 cut(s) 113, 2147
AccII CGCG 3 cut(s) 84, 560, 1005
AccIII TCCGGA 1 cut(s) 158
AciI CCGC 8 cut(s) 82, 1068, 1297, 1757, 2012, 2158, 3086, 3143
AclWI GGATC 4 cut(s) 111, 279, 1925, 3134
AcoI YGGCCR 1 cut(s) 2448
AcsI RAATTY 7 cut(s) 208, 356, 567, 756, 1133, 1170, 1373
AcuI CTGAAG 8 cut(s) 224, 255, 278, 1401, 1748, 2028, 2982, 3228
AfeI AGCGCT 1 cut(s) 1213
AfiI CCNNNNNNNGG 7 cut(s) 630, 631, 728, 800, 1606, 1642, 2457
AflIII ACRYGT 2 cut(s) 1003, 2735
AgsI TTSAA 5 cut(s) 329, 438, 1909, 2976, 3080
AjnI CCWGG 4 cut(s) 1021, 1083, 1202, 2938
AloI GAACNNNNNNTCC 2 cut(s) 2449, 2481
Alw21I GWGCWC 2 cut(s) 227, 2205
Alw26I GTCTC 6 cut(s) 605, 1888, 1944, 1958, 2945, 3257
AlwI GGATC 4 cut(s) 111, 279, 1925, 3134
AlwNI CAGNNNCTG 4 cut(s) 305, 1703, 2960, 3151
Aor13HI TCCGGA 1 cut(s) 158
Aor51HI AGCGCT 1 cut(s) 1213
AoxI GGCC 6 cut(s) 377, 1018, 1957, 2232, 2448, 2606
ApoI RAATTY 7 cut(s) 208, 356, 567, 756, 1133, 1170, 1373
ArsI GACNNNNNNTTYG 2 cut(s) 1821, 1853
AseI ATTAAT 1 cut(s) 3164
Asp700I GAANNNNTTC 2 cut(s) 1714, 3024
AspLEI GCGC 2 cut(s) 402, 1214
AspS9I GGNCC 3 cut(s) 1019, 1250, 2232
AsuHPI GGTGA 7 cut(s) 711, 1032, 1319, 1355, 1539, 2809, 3170
AsuII TTCGAA 1 cut(s) 1388
AvaII GGWCC 1 cut(s) 1250
AxyI CCTNAGG 1 cut(s) 1605
BaeI ACNNNNGTAYC 2 cut(s) 2423, 2456
BanI GGYRCC 2 cut(s) 892, 2060
BanII GRGCYC 1 cut(s) 2205
BbsI GAAGAC 3 cut(s) 134, 1803, 2536
Bbv12I GWGCWC 2 cut(s) 227, 2205
BcgI CGANNNNNNTGC 4 cut(s) 2137, 2171, 2225, 2259
BciT130I CCWGG 4 cut(s) 1023, 1085, 1204, 2940
BciVI GTATCC 1 cut(s) 2451
BclI TGATCA 1 cut(s) 750
BcoDI GTCTC 6 cut(s) 605, 1888, 1944, 1958, 2945, 3257
BfmI CTRYAG 1 cut(s) 306
BfoI RGCGCY 1 cut(s) 1215
BfuI GTATCC 1 cut(s) 2451
BmcAI AGTACT 3 cut(s) 454, 503, 1414
Bme1390I CCNGG 4 cut(s) 1023, 1085, 1204, 2940
Bme18I GGWCC 1 cut(s) 1250
BmgT120I GGNCC 3 cut(s) 1019, 1250, 2232
BmiI GGNNCC 6 cut(s) 531, 733, 894, 1251, 1717, 2062
BmrFI CCNGG 4 cut(s) 1023, 1085, 1204, 2940
BmrI ACTGGG 1 cut(s) 1679
BmsI GCATC 9 cut(s) 947, 1114, 1325, 1396, 1505, 1571, 1927, 2815, 3184
BmuI ACTGGG 1 cut(s) 1679
BpiI GAAGAC 3 cut(s) 134, 1803, 2536
BplI GAGNNNNNCTC 4 cut(s) 386, 418, 775, 807
BpmI CTGGAG 6 cut(s) 469, 569, 802, 2352, 2706, 2961
Bpu14I TTCGAA 1 cut(s) 1388
BpuEI CTTGAG 3 cut(s) 790, 1982, 2456
Bsa29I ATCGAT 1 cut(s) 3138
BsaAI YACGTR 1 cut(s) 2736
BsaI GGTCTC 1 cut(s) 1944
BsaJI CCNNGG 6 cut(s) 579, 625, 1021, 1083, 1833, 1934
BsaWI WCCGGW 2 cut(s) 158, 391
BsaXI ACNNNNNCTCC 4 cut(s) 2449, 2479, 3008, 3038
Bsc4I CCNNNNNNNGG 7 cut(s) 630, 631, 728, 800, 1606, 1642, 2457
Bse21I CCTNAGG 1 cut(s) 1605
Bse3DI GCAATG 4 cut(s) 1659, 1869, 2194, 2576
BseAI TCCGGA 1 cut(s) 158
BseBI CCWGG 4 cut(s) 1023, 1085, 1204, 2940
BseCI ATCGAT 1 cut(s) 3138
BseDI CCNNGG 6 cut(s) 579, 625, 1021, 1083, 1833, 1934
BseLI CCNNNNNNNGG 7 cut(s) 630, 631, 728, 800, 1606, 1642, 2457
BseMI GCAATG 4 cut(s) 1659, 1869, 2194, 2576
BseMII CTCAG 9 cut(s) 36, 261, 957, 1101, 1476, 1596, 1955, 1997, 2218
BseRI GAGGAG 4 cut(s) 269, 833, 1622, 2033
BseYI CCCAGC 1 cut(s) 1282
BsgI GTGCAG 1 cut(s) 320
Bsh1236I CGCG 3 cut(s) 84, 560, 1005
BshFI GGCC 6 cut(s) 379, 1020, 1959, 2234, 2450, 2608
BshNI GGYRCC 2 cut(s) 892, 2060
BshVI ATCGAT 1 cut(s) 3138
BsiHKAI GWGCWC 2 cut(s) 227, 2205
BsiSI CCGG 3 cut(s) 159, 392, 896
BslFI GGGAC 4 cut(s) 253, 682, 1115, 1263
BslI CCNNNNNNNGG 7 cut(s) 630, 631, 728, 800, 1606, 1642, 2457
BsmAI GTCTC 6 cut(s) 605, 1888, 1944, 1958, 2945, 3257
BsmBI CGTCTC 1 cut(s) 605
BsmFI GGGAC 4 cut(s) 253, 682, 1115, 1263
BsmI GAATGC 2 cut(s) 1621, 2836
BsnI GGCC 6 cut(s) 379, 1020, 1959, 2234, 2450, 2608
Bso31I GGTCTC 1 cut(s) 1944
Bsp119I TTCGAA 1 cut(s) 1388
Bsp1286I GDGCHC 2 cut(s) 227, 2205
Bsp13I TCCGGA 1 cut(s) 158
Bsp1407I TGTACA 1 cut(s) 2594
Bsp19I CCATGG 2 cut(s) 625, 1934
Bsp68I TCGCGA 1 cut(s) 560
BspACI CCGC 8 cut(s) 82, 1068, 1297, 1757, 2012, 2158, 3086, 3143
BspANI GGCC 6 cut(s) 379, 1020, 1959, 2234, 2450, 2608
BspCNI CTCAG 9 cut(s) 35, 260, 958, 1102, 1477, 1597, 1954, 1996, 2217
BspDI ATCGAT 1 cut(s) 3138
BspEI TCCGGA 1 cut(s) 158
BspFNI CGCG 3 cut(s) 84, 560, 1005
BspLI GGNNCC 6 cut(s) 531, 733, 894, 1251, 1717, 2062
BspMAI CTGCAG 1 cut(s) 310
BspPI GGATC 4 cut(s) 111, 279, 1925, 3134
BspQI GCTCTTC 1 cut(s) 410
BspT104I TTCGAA 1 cut(s) 1388
BspT107I GGYRCC 2 cut(s) 892, 2060
BspTNI GGTCTC 1 cut(s) 1944
BsrDI GCAATG 4 cut(s) 1659, 1869, 2194, 2576
BsrGI TGTACA 1 cut(s) 2594
BssECI CCNNGG 6 cut(s) 579, 625, 1021, 1083, 1833, 1934
BssT1I CCWWGG 3 cut(s) 579, 625, 1934
Bst2UI CCWGG 4 cut(s) 1023, 1085, 1204, 2940
Bst4CI ACNGT 5 cut(s) 111, 457, 484, 2294, 2747
Bst6I CTCTTC 8 cut(s) 410, 1385, 1891, 2259, 2943, 3015, 3075, 3260
BstAPI GCANNNNNTGC 1 cut(s) 305
BstAUI TGTACA 1 cut(s) 2594
BstBAI YACGTR 1 cut(s) 2736
BstBI TTCGAA 1 cut(s) 1388
BstC8I GCNNGC 6 cut(s) 306, 854, 1457, 1590, 2097, 2106
BstDSI CCRYGG 3 cut(s) 625, 1833, 1934
BstENI CCTNNNNNAGG 2 cut(s) 1604, 1640
BstFNI CGCG 3 cut(s) 84, 560, 1005
BstH2I RGCGCY 1 cut(s) 1215
BstHHI GCGC 2 cut(s) 402, 1214
BstMAI GTCTC 6 cut(s) 605, 1888, 1944, 1958, 2945, 3257
BstNI CCWGG 4 cut(s) 1023, 1085, 1204, 2940
BstNSI RCATGY 3 cut(s) 1293, 1813, 2099
BstSCI CCNGG 4 cut(s) 1021, 1083, 1202, 2938
BstSFI CTRYAG 1 cut(s) 306
BstUI CGCG 3 cut(s) 84, 560, 1005
BstV2I GAAGAC 3 cut(s) 134, 1803, 2536
BstX2I RGATCY 2 cut(s) 103, 1930
BstYI RGATCY 2 cut(s) 103, 1930
Bsu15I ATCGAT 1 cut(s) 3138
Bsu36I CCTNAGG 1 cut(s) 1605
BsuI GTATCC 1 cut(s) 2451
BsuRI GGCC 6 cut(s) 379, 1020, 1959, 2234, 2450, 2608
BsuTUI ATCGAT 1 cut(s) 3138
BtgI CCRYGG 3 cut(s) 625, 1833, 1934
BtgZI GCGATG 4 cut(s) 136, 1991, 2552, 3012
BtsIMutI CAGTG 5 cut(s) 225, 231, 540, 696, 1692
BtuMI TCGCGA 1 cut(s) 560
Cac8I GCNNGC 6 cut(s) 306, 854, 1457, 1590, 2097, 2106
CaiI CAGNNNCTG 4 cut(s) 305, 1703, 2960, 3151
CfoI GCGC 2 cut(s) 402, 1214
Cfr13I GGNCC 3 cut(s) 1019, 1250, 2232
ClaI ATCGAT 1 cut(s) 3138
CseI GACGC 4 cut(s) 61, 994, 1581, 2794
CspCI CAANNNNNGTGG 4 cut(s) 650, 685, 1731, 1766
EaeI YGGCCR 1 cut(s) 2448
Eam1104I CTCTTC 8 cut(s) 410, 1385, 1891, 2259, 2943, 3015, 3075, 3260
EarI CTCTTC 8 cut(s) 410, 1385, 1891, 2259, 2943, 3015, 3075, 3260
EciI GGCGGA 1 cut(s) 3101
Ecl136II GAGCTC 1 cut(s) 2203
Eco130I CCWWGG 3 cut(s) 579, 625, 1934
Eco147I AGGCCT 1 cut(s) 2608
Eco24I GRGCYC 1 cut(s) 2205
Eco31I GGTCTC 1 cut(s) 1944
Eco32I GATATC 1 cut(s) 2682
Eco47I GGWCC 1 cut(s) 1250
Eco47III AGCGCT 1 cut(s) 1213
Eco53kI GAGCTC 1 cut(s) 2203
Eco57I CTGAAG 8 cut(s) 224, 255, 278, 1401, 1748, 2028, 2982, 3228
Eco81I CCTNAGG 1 cut(s) 1605
EcoICRI GAGCTC 1 cut(s) 2203
EcoNI CCTNNNNNAGG 2 cut(s) 1604, 1640
EcoRI GAATTC 2 cut(s) 756, 1133
EcoRII CCWGG 4 cut(s) 1021, 1083, 1202, 2938
EcoRV GATATC 1 cut(s) 2682
EcoT14I CCWWGG 3 cut(s) 579, 625, 1934
EcoT22I ATGCAT 6 cut(s) 376, 1340, 1869, 1920, 2101, 2135
EcoT38I GRGCYC 1 cut(s) 2205
ErhI CCWWGG 3 cut(s) 579, 625, 1934
Esp3I CGTCTC 1 cut(s) 605
FalI AAGNNNNNCTT 6 cut(s) 309, 341, 2418, 2450, 2446, 2478
FaqI GGGAC 4 cut(s) 253, 682, 1115, 1263
FauNDI CATATG 2 cut(s) 702, 1447
FbaI TGATCA 1 cut(s) 750
FblI GTMKAC 2 cut(s) 113, 2147
FriOI GRGCYC 1 cut(s) 2205
GlaI GCGC 2 cut(s) 401, 1213
GsaI CCCAGC 1 cut(s) 1286
GsuI CTGGAG 6 cut(s) 469, 569, 802, 2352, 2706, 2961
HaeII RGCGCY 1 cut(s) 1215
HaeIII GGCC 6 cut(s) 379, 1020, 1959, 2234, 2450, 2608
HapII CCGG 3 cut(s) 159, 392, 896
HgaI GACGC 4 cut(s) 61, 994, 1581, 2794
HhaI GCGC 2 cut(s) 402, 1214
Hin6I GCGC 2 cut(s) 400, 1212
HinP1I GCGC 2 cut(s) 400, 1212
HincII GTYRAC 1 cut(s) 2148
HindII GTYRAC 1 cut(s) 2148
HindIII AAGCTT 1 cut(s) 2073
HpaII CCGG 3 cut(s) 159, 392, 896
HphI GGTGA 7 cut(s) 711, 1032, 1319, 1355, 1539, 2809, 3170
Hpy166II GTNNAC 7 cut(s) 114, 460, 1197, 2148, 2387, 2476, 2902
Hpy8I GTNNAC 7 cut(s) 114, 460, 1197, 2148, 2387, 2476, 2902
Hpy99I CGWCG 6 cut(s) 11, 17, 20, 94, 2152, 2449
HpyAV CCTTC 8 cut(s) 230, 745, 804, 1160, 1395, 2510, 2654, 2880
HpyCH4III ACNGT 5 cut(s) 111, 457, 484, 2294, 2747
HpyCH4IV ACGT 2 cut(s) 993, 2735
HpySE526I ACGT 2 cut(s) 993, 2735
HspAI GCGC 2 cut(s) 400, 1212
Kpn2I TCCGGA 1 cut(s) 158
Ksp22I TGATCA 1 cut(s) 750
LguI GCTCTTC 1 cut(s) 410
LmnI GCTCC 6 cut(s) 126, 282, 394, 529, 846, 2200
LweI GCATC 9 cut(s) 947, 1114, 1325, 1396, 1505, 1571, 1927, 2815, 3184
MaeII ACGT 2 cut(s) 993, 2735
MaeIII GTNAC 4 cut(s) 717, 787, 1394, 1679
MflI RGATCY 2 cut(s) 103, 1930
MhlI GDGCHC 2 cut(s) 227, 2205
MluI ACGCGT 1 cut(s) 1003
MlyI GAGTC 6 cut(s) 14, 758, 1058, 1850, 1975, 2276
MmeI TCCRAC 4 cut(s) 1041, 2147, 2231, 2250
Mph1103I ATGCAT 6 cut(s) 376, 1340, 1869, 1920, 2101, 2135
MroI TCCGGA 1 cut(s) 158
MroXI GAANNNNTTC 2 cut(s) 1714, 3024
MseI TTAA 6 cut(s) 267, 315, 425, 1092, 2210, 3164
MslI CAYNNNNRTG 2 cut(s) 1923, 2829
MspA1I CMGCKG 2 cut(s) 547, 1700
MspI CCGG 3 cut(s) 159, 392, 896
MspR9I CCNGG 4 cut(s) 1023, 1085, 1204, 2940
Mva1269I GAATGC 2 cut(s) 1621, 2836
MvaI CCWGG 4 cut(s) 1023, 1085, 1204, 2940
MvnI CGCG 3 cut(s) 84, 560, 1005
NcoI CCATGG 2 cut(s) 625, 1934
NdeI CATATG 2 cut(s) 702, 1447
NlaIV GGNNCC 6 cut(s) 531, 733, 894, 1251, 1717, 2062
NmuCI GTSAC 1 cut(s) 717
NruI TCGCGA 1 cut(s) 560
NsiI ATGCAT 6 cut(s) 376, 1340, 1869, 1920, 2101, 2135
NspI RCATGY 3 cut(s) 1293, 1813, 2099
NspV TTCGAA 1 cut(s) 1388
PaeI GCATGC 1 cut(s) 2099
PceI AGGCCT 1 cut(s) 2608
PciSI GCTCTTC 1 cut(s) 410
PcsI WCGNNNNNNNCGW 3 cut(s) 12, 15, 2988
PctI GAATGC 2 cut(s) 1621, 2836
PdmI GAANNNNTTC 2 cut(s) 1714, 3024
PfeI GAWTC 5 cut(s) 2402, 2552, 2957, 2972, 2987
PleI GAGTC 6 cut(s) 14, 758, 1058, 1849, 1975, 2275
PpsI GAGTC 6 cut(s) 14, 758, 1058, 1849, 1975, 2275
Ppu21I YACGTR 1 cut(s) 2736
PshBI ATTAAT 1 cut(s) 3164
Psp124BI GAGCTC 1 cut(s) 2205
Psp6I CCWGG 4 cut(s) 1021, 1083, 1202, 2938
PspFI CCCAGC 1 cut(s) 1282
PspGI CCWGG 4 cut(s) 1021, 1083, 1202, 2938
PspN4I GGNNCC 6 cut(s) 531, 733, 894, 1251, 1717, 2062
PspPI GGNCC 3 cut(s) 1019, 1250, 2232
PstI CTGCAG 1 cut(s) 310
PstNI CAGNNNCTG 4 cut(s) 305, 1703, 2960, 3151
PsuI RGATCY 2 cut(s) 103, 1930
PvuII CAGCTG 2 cut(s) 547, 1700
RruI TCGCGA 1 cut(s) 560
RseI CAYNNNNRTG 2 cut(s) 1923, 2829
SacI GAGCTC 1 cut(s) 2205
SalI GTCGAC 1 cut(s) 2146
SapI GCTCTTC 1 cut(s) 410
SaqAI TTAA 6 cut(s) 267, 315, 425, 1092, 2210, 3164
Sau96I GGNCC 3 cut(s) 1019, 1250, 2232
ScaI AGTACT 3 cut(s) 454, 503, 1414
SchI GAGTC 6 cut(s) 14, 758, 1058, 1850, 1975, 2276
ScrFI CCNGG 4 cut(s) 1023, 1085, 1204, 2940
SduI GDGCHC 2 cut(s) 227, 2205
SfaNI GCATC 9 cut(s) 947, 1114, 1325, 1396, 1505, 1571, 1927, 2815, 3184
SfcI CTRYAG 1 cut(s) 306
SfuI TTCGAA 1 cut(s) 1388
SinI GGWCC 1 cut(s) 1250
SmiMI CAYNNNNRTG 2 cut(s) 1923, 2829
SmlI CTYRAG 3 cut(s) 769, 1961, 2435
SmoI CTYRAG 3 cut(s) 769, 1961, 2435
SphI GCATGC 1 cut(s) 2099
SseBI AGGCCT 1 cut(s) 2608
SsiI CCGC 8 cut(s) 82, 1068, 1297, 1757, 2012, 2158, 3086, 3143
SstI GAGCTC 1 cut(s) 2205
StuI AGGCCT 1 cut(s) 2608
StyD4I CCNGG 4 cut(s) 1021, 1083, 1202, 2938
StyI CCWWGG 3 cut(s) 579, 625, 1934
TaaI ACNGT 5 cut(s) 111, 457, 484, 2294, 2747
TaiI ACGT 2 cut(s) 996, 2738
TatI WGTACW 4 cut(s) 452, 501, 1412, 2594
TauI GCSGC 1 cut(s) 1759
TfiI GAWTC 5 cut(s) 2402, 2552, 2957, 2972, 2987
Tru1I TTAA 6 cut(s) 267, 315, 425, 1092, 2210, 3164
Tru9I TTAA 6 cut(s) 267, 315, 425, 1092, 2210, 3164
TscAI CASTG 5 cut(s) 232, 238, 540, 696, 1692
TseFI GTSAC 1 cut(s) 717
Tsp45I GTSAC 1 cut(s) 717
TspGWI ACGGA 6 cut(s) 107, 1496, 1822, 2372, 2433, 3029
TspRI CASTG 5 cut(s) 232, 238, 540, 696, 1692
VpaK11BI GGWCC 1 cut(s) 1250
VspI ATTAAT 1 cut(s) 3164
XagI CCTNNNNNAGG 2 cut(s) 1604, 1640
XapI RAATTY 7 cut(s) 208, 356, 567, 756, 1133, 1170, 1373
XbaI TCTAGA 1 cut(s) 3028
XceI RCATGY 3 cut(s) 1293, 1813, 2099
XmiI GTMKAC 2 cut(s) 113, 2147
XmnI GAANNNNTTC 2 cut(s) 1714, 3024
ZrmI AGTACT 3 cut(s) 454, 503, 1414
Zsp2I ATGCAT 6 cut(s) 376, 1340, 1869, 1920, 2101, 2135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.