MD16G1139700.v1.1
ERF Family

ARM repeat superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0011419
Physical Location & Seq
Forward (+)
10748983 .. 10755998
7016 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1139700.v1.1.491

Sequence Viewer

Length: 3294 bp
ATGGAGGTCGCAGCTCAAATCGCTCAGCTGCTGAACGAGACTCTAAACCCAGACTGCGCCGCCGTCCACACGGCGACCGAAGCACTCGATCGCCTCTCGCAGCTCCCCCAATTCCCTTACTATCTCCTCTCCATCTCCACCGGAGGTGAAGATCGAGGTCAGAAAGTCGCTGCGGCAGCGTACCTTAAAAACTTTACCAGGCGAAATGTGGACTGCGAGAATCCGAATTCGAAATCAAACGTTAGCAAGGAGTTCAAGGACCAGCTTTTGCGGGCATTGCTGCAAGCCGAACAATCGGTTGTCAAAATTTTGGTTGAAGTGTTCCGGATCATTGTTGTTGCCGAGTTTGTTAAGCAGAACTCGTGGCCGGAACTTGTACCCGAATTGCGATCTGCTATTCAAAATAGCAACCTTATTAGCAATGGTGCAAACTCGCAATGGACCACAGCCAATGCCCTTACGATTCTTCACGCGCTCCTTAGGCCCTTTCAGTATTTTTTAAATCCTAAAGTTGCCAAGGAGCCAATACCGCCACAGCTAGAGCTAATTGCGAAAGACATTCTTGTGCCCTTGTTAATTGTTTTCCATCAATTTGTCGAAAAGGCTTTGGGTGCTCATGGTACAACAGATGTGGAAGCAGAGAATATCCTTCTGGTTGTCAGCAAATGCATGTATTTTACTGTGAGGTCGCATATGCCATCTGCTTTAGTGCCTCTTCTACCTTCATTTTGTCATGATCTAATTGCCATTCTTAGTTCTTTGAGTTTTGAATCCGTGGTTACTCCACAAAATGGGTACCTGATGAGATTGAAGACTGGGAAAAGAAGTTTGCTCATTTTCTGTACTCTCATTACTCGACACCGGAAGCATTCTGATAAGTTGATGCCAGACATGATAAAATGCGTTCTGAACATAGTAAAATATACCAAAAATGTTGGTAGGCTTGATTTTTTATCGGAGAGGATTCTTTCATTAGCTTTTGATGTGATTTCACGTGTTCTTGAAACAGGGCCTGGATGGAGAATAGTTTCTCCACATTTTTCATCTCTGTTGGACTCTGCAATCTTTCAAGCATTGGTAATGAACGAGAAGGATATCGTAGAGTGGGATGAAGATGCAGATGAGTACATACGAAAGAATCTTCCATCTGACATTGAAGAAATTTCTGGCTGGAGGGAGGATCTATTTACGGCCAGAAAAAGTGCTATCAATTTAATTGGTGTTATGTCAGTGTCAAAGGGACCTCCGGTAGGAACTTCTACTAATAGCTTATCAGCATCATCAAAACGTAAAAAGAATGAAAAGAACAAGAGAAGCAATCAACATGCTTCAATTGGAGAACTATTGGTGCTTCCATTTCTGTCGAAGTTTCCAATTCCTTCTGATGCTAATACATCCCAAACTAGAATTCAGAACGATTATTTTGGTGTTTTGATGGCATATGGTGGCTTGTTAGATTTTCTAAGAGAGCAGCAACCTGCATATGCGACAACTCTGGTTCAAACTCGGTTGCTACCATTGTATAAATTATCAGTCTCCTTACCGTACTTAGTTGCCACTGCAAACTGGGTTCTTGGAGAGCTTGCTTCCTGCCTACCTGAAGAGATGAGTGCAGATGTGTATACCTCATTGCTCAAGGCATTGGTTATGCCTGATAATGGGGATATTTCTTGTTATCCTGTGCGGGTTTCTGCTGCTGCGGCAATTGTGGGACTTCTTGATAATGACTACCCACCACCTGAGTGGCTTCCTCTCCTTCAAGTTGTGATTGGTAGGATTGGCAATAACGAGGAAGAAAGCTCAATTTTATTTCGTCTTCTCAGTTCTGTGGTGGAGGTGGGACATGAAAATGTTGTAGTTCATATCCCTTACATTGTTTCAACATTAGTTGTTGGAATCTCAAAATGCATTCCCACTGATCTGGAGCCATGGCCTCAGATGGTTGAAAAGGGCTTTGAAGCATTAGCAGCAATAGATCAATCTTGGGAAAGTTTTACGGCTGAACAATCTGAGGAGAATGAATCGAGTGAAAAGTGGGTATCAAGCCGAGCTACCATCGGTAGAGCTTTCTCTTCTCTCTTGCAACAGGCTTGGCTTGCACCAGCGCATCACTTGGGACGGGAAGACGAGGTTTTGCCCCCTTCTTCTTGCTTAGATTATGCATCAACATTGCTCCGATCCATCATGCTGTCTGTTACTGAAAGTAATGCAATTCTAGAGCTTAAAGTATCAGAGTTATTATTAGTTTGGGCTGATCTGATTGCCAACTGGCATGCTTGGGAAGAATCAGAGGATATGTCAATCTTTGAGTGCATTAAGGAAGCGGTCAGTCTACACAAAAAATATGGGTTGAAGAATTTTATTGTAGGACAAATGCCATCTCCTCCAGCTCCACCTGTTCCTCAGCATTCCATAATACAAGGCATTGGTACTTTTATAAGCGAGGCTGCCTTACAATATCCATCTGCAATGTGGAAGATTTGCTCTTGTATCCATATACTACTACATGCCCCAATTTACTCATCCGAGACAGAAGGTGTGAAGCAGTCGTTGGCAGTTGCATTTTGTCAGGCAACATATACCCGTTTCAGAGAAATTAAAAGCAAGCCTGGTCCTCTCTGGAAGCCTTTGCTGCTCGCTATATCATCATGCTATTTATGCTGTCCCGAAGTTGTAGAGGGTATATTGGAGAAGGATGGAGATGGAGGATTTCAAACCTGGATGTCTGCACTTGGATCCGTTTCCTCTAGCTCTTTCAAACCGGGGCTACCTACAGAGTCAGAGATAAAGTTGATTGTGCTGGCACTGGCAAAAGTGGTTGAACGGGTGGTGGTAGTTGGAAAGTCATCTGGTGCTTTGTTACGGGAATGCTTTACCTCTCTGATGGAAGCATCTATACGATGGAAAGAACTGCAGGAAGAAGAGGAAGCAGGTGGAGAAGAAGAGACCGAGGATGATGATGAAATTGAAGATGATGATGATGATGACGACGATGATGAGGATTCGGAGGATGATGAATATGAAGAGACTGAGGAAGAGTTTCTGAATAGGTATGCTGAAGCAGCTCTTGCTTTGGAAAACGGTACAGTTATCGAAGAGGGGGAACTAGAAGATGAAGACCAGGAAATGGATTTTGAGCAAGGCTGCTTAGACGAAATTGATCTGGAAAGAGTTGTATCGTCACTTCTGGAGAGATACCATCCTGTAGTCATACAAGGACAGGCATTTCCACCGGAGCTGATTTCGAGTTTCCTAGAAGTTTTCCCTCAATGTAGGTCGTTCTTCCAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04013 map04013
Pfam Domains
Protein Families
IBN_N

Protein Analysis

1098

Amino Acids

122.14

Weight (kDa)

4.7

Isoelectric Point (pI)

52.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011419)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17340 AT3G17340
fragaria_vesca FvH4_4g21110 FvH4_4g21110 FvH4_4g21110
malus_domestica MD15G1386700.v1.1 MD16G1139700.v1.1
prunus_persica Prupe.1G109100_v2.0.a1
pyrus_communis pycom16g12390
rosa_chinensis RchiOBHm_Chr4g0426661
rosa_laevigata RLG00000007286
rosa_multiflora Rmu_sc0001821.1_g000015
rosa_roxburghii Rroxscaffold_5G00368660
rosa_rugosa Rorug04G0214000 Rorug04G0214100
rosa_samantha Rh4AG269200 Rh4BG275500 Rh4CG290000 Rh4DG272500
rosa_wichuraiana Rw4G023350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2438
AarI CACCTGC 1 cut(s) 2921
Acc36I ACCTGC 2 cut(s) 1486, 2921
Acc65I GGTACC 1 cut(s) 795
AccB1I GGYRCC 1 cut(s) 795
AccB7I CCANNNNNTGG 2 cut(s) 791, 3127
AccI GTMKAC 2 cut(s) 1622, 2332
AccII CGCG 1 cut(s) 473
AccIII TCCGGA 1 cut(s) 324
AciI CCGC 7 cut(s) 60, 173, 271, 530, 1684, 1700, 2324
AclI AACGTT 1 cut(s) 240
AclWI GGATC 5 cut(s) 335, 1188, 2172, 2730, 2743
AcoI YGGCCR 2 cut(s) 365, 1191
AcsI RAATTY 5 cut(s) 226, 306, 1161, 1407, 2356
AcuI CTGAAG 2 cut(s) 1620, 3078
AcvI CACGTG 1 cut(s) 995
AfaI GTAC 9 cut(s) 182, 378, 622, 797, 844, 1127, 1547, 2431, 3085
AfiI CCNNNNNNNGG 4 cut(s) 791, 1250, 1658, 3127
AflIII ACRYGT 1 cut(s) 994
AjnI CCWGG 5 cut(s) 197, 1012, 2608, 2717, 3120
AjuI GAANNNNNNNTTGG 4 cut(s) 1392, 1424, 2534, 2566
AleI CACNNNNGTG 1 cut(s) 1741
Alw21I GWGCWC 1 cut(s) 616
Alw26I GTCTC 5 cut(s) 32, 1540, 2522, 2939, 3020
AlwI GGATC 5 cut(s) 335, 1188, 2172, 2730, 2743
AlwNI CAGNNNCTG 2 cut(s) 31, 1013
Aor13HI TCCGGA 1 cut(s) 324
AoxI GGCC 5 cut(s) 365, 482, 1010, 1191, 1931
ApoI RAATTY 5 cut(s) 226, 306, 1161, 1407, 2356
Asp700I GAANNNNTTC 2 cut(s) 1027, 3039
Asp718I GGTACC 1 cut(s) 795
AspLEI GCGC 3 cut(s) 59, 475, 2107
AspS9I GGNCC 6 cut(s) 259, 441, 483, 1010, 1241, 2612
AsuC2I CCSGG 1 cut(s) 2763
AsuHPI GGTGA 1 cut(s) 158
AsuII TTCGAA 1 cut(s) 230
AvaII GGWCC 4 cut(s) 259, 441, 1241, 2612
AxyI CCTNAGG 1 cut(s) 479
BaeGI GKGCMC 1 cut(s) 570
BamHI GGATCC 1 cut(s) 2735
BanI GGYRCC 1 cut(s) 795
BarI GAAGNNNNNNTAC 4 cut(s) 2880, 2912, 3168, 3200
BauI CACGAG 1 cut(s) 361
BbrPI CACGTG 1 cut(s) 995
BbsI GAAGAC 4 cut(s) 818, 1808, 2130, 3123
Bbv12I GWGCWC 1 cut(s) 616
BbvCI CCTCAGC 1 cut(s) 2403
BceAI ACGGC 4 cut(s) 47, 87, 1206, 2013
BciT130I CCWGG 5 cut(s) 199, 1014, 2610, 2719, 3122
BciVI GTATCC 1 cut(s) 2501
BcnI CCSGG 1 cut(s) 2763
BcoDI GTCTC 5 cut(s) 32, 1540, 2522, 2939, 3020
BfaI CTAG 6 cut(s) 539, 1404, 2216, 2748, 3107, 3254
BfmI CTRYAG 3 cut(s) 2772, 2912, 3204
BfuAI ACCTGC 2 cut(s) 1486, 2921
BfuI GTATCC 1 cut(s) 2501
BlpI GCTNAGC 1 cut(s) 24
Bme1390I CCNGG 6 cut(s) 199, 1014, 2610, 2719, 2763, 3122
Bme18I GGWCC 4 cut(s) 259, 441, 1241, 2612
BmgT120I GGNCC 6 cut(s) 259, 441, 483, 1010, 1241, 2612
BmiI GGNNCC 5 cut(s) 522, 797, 1242, 1926, 2737
BmrFI CCNGG 6 cut(s) 199, 1014, 2610, 2719, 2763, 3122
BmrI ACTGGG 2 cut(s) 825, 1576
BmsI GCATC 7 cut(s) 873, 1105, 1286, 1375, 2116, 2171, 2900
BmuI ACTGGG 2 cut(s) 825, 1576
BpiI GAAGAC 4 cut(s) 818, 1808, 2130, 3123
BpmI CTGGAG 4 cut(s) 1192, 1943, 2370, 3209
Bpu10I CCTNAGC 1 cut(s) 2403
Bpu1102I GCTNAGC 1 cut(s) 24
Bpu14I TTCGAA 1 cut(s) 230
BpuEI CTTGAG 1 cut(s) 1619
BpuMI CCSGG 1 cut(s) 2763
BsaAI YACGTR 1 cut(s) 995
BsaI GGTCTC 1 cut(s) 2939
BsaJI CCNNGG 5 cut(s) 516, 774, 1928, 2762, 2949
BsaWI WCCGGW 5 cut(s) 140, 324, 861, 1246, 3232
Bsc4I CCNNNNNNNGG 4 cut(s) 791, 1250, 1658, 3127
Bse1I ACTGG 4 cut(s) 820, 1571, 2273, 2811
Bse21I CCTNAGG 1 cut(s) 479
Bse3DI GCAATG 6 cut(s) 275, 427, 443, 1628, 2168, 2475
BseAI TCCGGA 1 cut(s) 324
BseBI CCWGG 5 cut(s) 199, 1014, 2610, 2719, 3122
BseDI CCNNGG 5 cut(s) 516, 774, 1928, 2762, 2949
BseGI GGATG 9 cut(s) 1022, 1114, 1394, 2522, 2701, 2727, 2959, 3016, 3199
BseLI CCNNNNNNNGG 4 cut(s) 791, 1250, 1658, 3127
BseMI GCAATG 6 cut(s) 275, 427, 443, 1628, 2168, 2475
BseMII CTCAG 7 cut(s) 38, 1731, 1834, 1949, 2001, 2417, 3021
BseNI ACTGG 4 cut(s) 820, 1571, 2273, 2811
BseRI GAGGAG 3 cut(s) 116, 2027, 2373
BseSI GKGCMC 1 cut(s) 570
BsgI GTGCAG 2 cut(s) 1632, 2712
Bsh1236I CGCG 1 cut(s) 473
Bsh1285I CGRYCG 2 cut(s) 78, 91
BshFI GGCC 5 cut(s) 367, 484, 1012, 1193, 1933
BshNI GGYRCC 1 cut(s) 795
BsiEI CGRYCG 2 cut(s) 78, 91
BsiHKAI GWGCWC 1 cut(s) 616
BsiSI CCGG 7 cut(s) 141, 325, 368, 862, 1247, 2762, 3233
BslFI GGGAC 5 cut(s) 1254, 1725, 1854, 2130, 2649
BslI CCNNNNNNNGG 4 cut(s) 791, 1250, 1658, 3127
BsmAI GTCTC 5 cut(s) 32, 1540, 2522, 2939, 3020
BsmFI GGGAC 5 cut(s) 1254, 1725, 1854, 2130, 2649
BsmI GAATGC 4 cut(s) 868, 1908, 2407, 2873
BsnI GGCC 5 cut(s) 367, 484, 1012, 1193, 1933
Bso31I GGTCTC 1 cut(s) 2939
Bsp119I TTCGAA 1 cut(s) 230
Bsp1286I GDGCHC 2 cut(s) 570, 616
Bsp13I TCCGGA 1 cut(s) 324
Bsp1720I GCTNAGC 1 cut(s) 24
Bsp19I CCATGG 1 cut(s) 1928
BspACI CCGC 7 cut(s) 60, 173, 271, 530, 1684, 1700, 2324
BspANI GGCC 5 cut(s) 367, 484, 1012, 1193, 1933
BspCNI CTCAG 7 cut(s) 37, 1732, 1833, 1948, 2002, 2416, 3022
BspEI TCCGGA 1 cut(s) 324
BspFNI CGCG 1 cut(s) 473
BspHI TCATGA 1 cut(s) 733
BspLI GGNNCC 5 cut(s) 522, 797, 1242, 1926, 2737
BspMAI CTGCAG 1 cut(s) 2916
BspMI ACCTGC 2 cut(s) 1486, 2921
BspPI GGATC 5 cut(s) 335, 1188, 2172, 2730, 2743
BspT104I TTCGAA 1 cut(s) 230
BspT107I GGYRCC 1 cut(s) 795
BspTNI GGTCTC 1 cut(s) 2939
BsrDI GCAATG 6 cut(s) 275, 427, 443, 1628, 2168, 2475
BsrI ACTGG 4 cut(s) 820, 1571, 2273, 2811
BssECI CCNNGG 5 cut(s) 516, 774, 1928, 2762, 2949
BssNAI GTATAC 1 cut(s) 1623
BssSI CACGAG 1 cut(s) 361
BssT1I CCWWGG 2 cut(s) 516, 1928
Bst1107I GTATAC 1 cut(s) 1623
Bst2BI CACGAG 1 cut(s) 361
Bst2UI CCWGG 5 cut(s) 199, 1014, 2610, 2719, 3122
Bst4CI ACNGT 4 cut(s) 682, 1545, 3083, 3088
Bst6I CTCTTC 8 cut(s) 720, 1596, 2077, 2916, 2937, 3018, 3030, 3090
BstAPI GCANNNNNTGC 1 cut(s) 3068
BstBAI YACGTR 1 cut(s) 995
BstBI TTCGAA 1 cut(s) 230
BstC8I GCNNGC 8 cut(s) 273, 285, 1584, 2097, 2274, 2606, 2637, 2802
BstDSI CCRYGG 2 cut(s) 774, 1928
BstENI CCTNNNNNAGG 1 cut(s) 1248
BstF5I GGATG 9 cut(s) 1022, 1114, 1394, 2522, 2701, 2727, 2959, 3016, 3199
BstFNI CGCG 1 cut(s) 473
BstHHI GCGC 3 cut(s) 59, 475, 2107
BstMAI GTCTC 5 cut(s) 32, 1540, 2522, 2939, 3020
BstMCI CGRYCG 2 cut(s) 78, 91
BstNI CCWGG 5 cut(s) 199, 1014, 2610, 2719, 3122
BstNSI RCATGY 4 cut(s) 673, 1328, 2276, 2510
BstSCI CCNGG 6 cut(s) 197, 1012, 2608, 2717, 2761, 3120
BstSFI CTRYAG 3 cut(s) 2772, 2912, 3204
BstSLI GKGCMC 1 cut(s) 570
BstUI CGCG 1 cut(s) 473
BstV2I GAAGAC 4 cut(s) 818, 1808, 2130, 3123
BstX2I RGATCY 2 cut(s) 1180, 2735
BstXI CCANNNNNNTGG 2 cut(s) 1743, 1921
BstYI RGATCY 2 cut(s) 1180, 2735
BstZ17I GTATAC 1 cut(s) 1623
Bsu36I CCTNAGG 1 cut(s) 479
BsuI GTATCC 1 cut(s) 2501
BsuRI GGCC 5 cut(s) 367, 484, 1012, 1193, 1933
BtgI CCRYGG 2 cut(s) 774, 1928
BtsCI GGATG 9 cut(s) 1022, 1114, 1394, 2522, 2701, 2727, 2959, 3016, 3199
BtsI GCAGTG 1 cut(s) 1557
BtsIMutI CAGTG 4 cut(s) 1236, 1557, 1914, 2804
BveI ACCTGC 2 cut(s) 1486, 2921
Cac8I GCNNGC 8 cut(s) 273, 285, 1584, 2097, 2274, 2606, 2637, 2802
CaiI CAGNNNCTG 2 cut(s) 31, 1013
CciI TCATGA 1 cut(s) 733
CfoI GCGC 3 cut(s) 59, 475, 2107
Cfr13I GGNCC 6 cut(s) 259, 441, 483, 1010, 1241, 2612
Csp6I GTAC 9 cut(s) 181, 377, 621, 796, 843, 1126, 1546, 2430, 3084
CspCI CAANNNNNGTGG 2 cut(s) 612, 647
CviQI GTAC 9 cut(s) 181, 377, 621, 796, 843, 1126, 1546, 2430, 3084
DraI TTTAAA 1 cut(s) 501
EaeI YGGCCR 2 cut(s) 365, 1191
Eam1104I CTCTTC 8 cut(s) 720, 1596, 2077, 2916, 2937, 3018, 3030, 3090
EarI CTCTTC 8 cut(s) 720, 1596, 2077, 2916, 2937, 3018, 3030, 3090
Eco130I CCWWGG 2 cut(s) 516, 1928
Eco31I GGTCTC 1 cut(s) 2939
Eco32I GATATC 1 cut(s) 1096
Eco47I GGWCC 4 cut(s) 259, 441, 1241, 2612
Eco57I CTGAAG 2 cut(s) 1620, 3078
Eco72I CACGTG 1 cut(s) 995
Eco81I CCTNAGG 1 cut(s) 479
EcoNI CCTNNNNNAGG 1 cut(s) 1248
EcoO109I RGGNCCY 3 cut(s) 483, 1010, 1241
EcoRI GAATTC 2 cut(s) 226, 1407
EcoRII CCWGG 5 cut(s) 197, 1012, 2608, 2717, 3120
EcoRV GATATC 1 cut(s) 1096
EcoT14I CCWWGG 2 cut(s) 516, 1928
EcoT22I ATGCAT 3 cut(s) 671, 1910, 2164
ErhI CCWWGG 2 cut(s) 516, 1928
FalI AAGNNNNNCTT 4 cut(s) 546, 578, 3051, 3083
FaqI GGGAC 5 cut(s) 1254, 1725, 1854, 2130, 2649
FauI CCCGC 2 cut(s) 264, 1677
FauNDI CATATG 3 cut(s) 693, 1441, 1483
FblI GTMKAC 2 cut(s) 1622, 2332
FokI GGATG 9 cut(s) 1029, 1121, 1381, 2509, 2708, 2734, 2966, 3023, 3186
FspBI CTAG 6 cut(s) 539, 1404, 2216, 2748, 3107, 3254
GlaI GCGC 3 cut(s) 58, 474, 2106
GsuI CTGGAG 4 cut(s) 1192, 1943, 2370, 3209
HaeIII GGCC 5 cut(s) 367, 484, 1012, 1193, 1933
HapII CCGG 7 cut(s) 141, 325, 368, 862, 1247, 2762, 3233
HhaI GCGC 3 cut(s) 59, 475, 2107
Hin6I GCGC 3 cut(s) 57, 473, 2105
HinP1I GCGC 3 cut(s) 57, 473, 2105
HpaII CCGG 7 cut(s) 141, 325, 368, 862, 1247, 2762, 3233
HphI GGTGA 1 cut(s) 158
Hpy166II GTNNAC 4 cut(s) 67, 211, 1623, 2333
Hpy8I GTNNAC 4 cut(s) 67, 211, 1623, 2333
Hpy99I CGWCG 1 cut(s) 2993
HpyAV CCTTC 8 cut(s) 659, 732, 1084, 1389, 1766, 2151, 2528, 2686
HpyCH4III ACNGT 4 cut(s) 682, 1545, 3083, 3088
HpyCH4IV ACGT 3 cut(s) 240, 994, 1288
HpySE526I ACGT 3 cut(s) 240, 994, 1288
HspAI GCGC 3 cut(s) 57, 473, 2105
Kpn2I TCCGGA 1 cut(s) 324
KpnI GGTACC 1 cut(s) 799
LmnI GCTCC 7 cut(s) 108, 480, 520, 1924, 2178, 2395, 3235
LweI GCATC 7 cut(s) 873, 1105, 1286, 1375, 2116, 2171, 2900
MaeI CTAG 6 cut(s) 539, 1404, 2216, 2748, 3107, 3254
MaeII ACGT 3 cut(s) 240, 994, 1288
MaeIII GTNAC 4 cut(s) 778, 2194, 2859, 3180
MfeI CAATTG 2 cut(s) 1332, 1704
MflI RGATCY 2 cut(s) 1180, 2735
MhlI GDGCHC 2 cut(s) 570, 616
MlyI GAGTC 3 cut(s) 34, 1049, 2786
MmeI TCCRAC 3 cut(s) 1032, 1873, 2818
Mph1103I ATGCAT 3 cut(s) 671, 1910, 2164
MroI TCCGGA 1 cut(s) 324
MroXI GAANNNNTTC 2 cut(s) 1027, 3039
MseI TTAA 8 cut(s) 186, 351, 500, 575, 1214, 2223, 2316, 2598
MslI CAYNNNNRTG 3 cut(s) 563, 1741, 1848
MspA1I CMGCKG 1 cut(s) 28
MspI CCGG 7 cut(s) 141, 325, 368, 862, 1247, 2762, 3233
MspR9I CCNGG 6 cut(s) 199, 1014, 2610, 2719, 2763, 3122
MunI CAATTG 2 cut(s) 1332, 1704
Mva1269I GAATGC 4 cut(s) 868, 1908, 2407, 2873
MvaI CCWGG 5 cut(s) 199, 1014, 2610, 2719, 3122
MvnI CGCG 1 cut(s) 473
NciI CCSGG 1 cut(s) 2763
NcoI CCATGG 1 cut(s) 1928
NdeI CATATG 3 cut(s) 693, 1441, 1483
NlaIV GGNNCC 5 cut(s) 522, 797, 1242, 1926, 2737
NmeAIII GCCGAG 2 cut(s) 367, 2072
NmuCI GTSAC 1 cut(s) 3180
NsiI ATGCAT 3 cut(s) 671, 1910, 2164
NspI RCATGY 4 cut(s) 673, 1328, 2276, 2510
NspV TTCGAA 1 cut(s) 230
OliI CACNNNNGTG 1 cut(s) 1741
PaeI GCATGC 1 cut(s) 2276
PagI TCATGA 1 cut(s) 733
PaqCI CACCTGC 1 cut(s) 2921
PctI GAATGC 4 cut(s) 868, 1908, 2407, 2873
PdmI GAANNNNTTC 2 cut(s) 1027, 3039
PfeI GAWTC 9 cut(s) 220, 463, 770, 964, 1138, 1896, 2021, 2285, 3002
PflMI CCANNNNNTGG 2 cut(s) 791, 3127
Ple19I CGATCG 1 cut(s) 91
PleI GAGTC 3 cut(s) 34, 1049, 2785
PmaCI CACGTG 1 cut(s) 995
PmlI CACGTG 1 cut(s) 995
PpsI GAGTC 3 cut(s) 34, 1049, 2785
Ppu21I YACGTR 1 cut(s) 995
PpuMI RGGWCCY 1 cut(s) 1241
PsiI TTATAA 1 cut(s) 2438
Psp1406I AACGTT 1 cut(s) 240
Psp5II RGGWCCY 1 cut(s) 1241
Psp6I CCWGG 5 cut(s) 197, 1012, 2608, 2717, 3120
PspCI CACGTG 1 cut(s) 995
PspGI CCWGG 5 cut(s) 197, 1012, 2608, 2717, 3120
PspN4I GGNNCC 5 cut(s) 522, 797, 1242, 1926, 2737
PspPI GGNCC 6 cut(s) 259, 441, 483, 1010, 1241, 2612
PspPPI RGGWCCY 1 cut(s) 1241
PstI CTGCAG 1 cut(s) 2916
PstNI CAGNNNCTG 2 cut(s) 31, 1013
PsuI RGATCY 2 cut(s) 1180, 2735
PvuI CGATCG 1 cut(s) 91
PvuII CAGCTG 1 cut(s) 28
RsaI GTAC 9 cut(s) 182, 378, 622, 797, 844, 1127, 1547, 2431, 3085
RsaNI GTAC 9 cut(s) 181, 377, 621, 796, 843, 1126, 1546, 2430, 3084
RseI CAYNNNNRTG 3 cut(s) 563, 1741, 1848
SaqAI TTAA 8 cut(s) 186, 351, 500, 575, 1214, 2223, 2316, 2598
Sau96I GGNCC 6 cut(s) 259, 441, 483, 1010, 1241, 2612
SchI GAGTC 3 cut(s) 34, 1049, 2786
ScrFI CCNGG 6 cut(s) 199, 1014, 2610, 2719, 2763, 3122
SduI GDGCHC 2 cut(s) 570, 616
SfaNI GCATC 7 cut(s) 873, 1105, 1286, 1375, 2116, 2171, 2900
SfcI CTRYAG 3 cut(s) 2772, 2912, 3204
SfuI TTCGAA 1 cut(s) 230
SinI GGWCC 4 cut(s) 259, 441, 1241, 2612
SmiMI CAYNNNNRTG 3 cut(s) 563, 1741, 1848
SmlI CTYRAG 1 cut(s) 1634
SmoI CTYRAG 1 cut(s) 1634
SphI GCATGC 1 cut(s) 2276
SsiI CCGC 7 cut(s) 60, 173, 271, 530, 1684, 1700, 2324
SspMI CTAG 6 cut(s) 539, 1404, 2216, 2748, 3107, 3254
StyD4I CCNGG 6 cut(s) 197, 1012, 2608, 2717, 2761, 3120
StyI CCWWGG 2 cut(s) 516, 1928
TaaI ACNGT 4 cut(s) 682, 1545, 3083, 3088
TaiI ACGT 3 cut(s) 243, 997, 1291
TaqI TCGA 9 cut(s) 87, 154, 230, 597, 856, 1364, 2024, 3093, 3245
TaqII GACCGA 2 cut(s) 92, 2963
TatI WGTACW 2 cut(s) 842, 1125
TauI GCSGC 3 cut(s) 62, 176, 1703
TfiI GAWTC 9 cut(s) 220, 463, 770, 964, 1138, 1896, 2021, 2285, 3002
Tru1I TTAA 8 cut(s) 186, 351, 500, 575, 1214, 2223, 2316, 2598
Tru9I TTAA 8 cut(s) 186, 351, 500, 575, 1214, 2223, 2316, 2598
TscAI CASTG 4 cut(s) 1236, 1564, 1921, 2811
TseFI GTSAC 1 cut(s) 3180
Tsp45I GTSAC 1 cut(s) 3180
TspGWI ACGGA 2 cut(s) 763, 2728
TspRI CASTG 4 cut(s) 1236, 1564, 1921, 2811
Van91I CCANNNNNTGG 2 cut(s) 791, 3127
VpaK11BI GGWCC 4 cut(s) 259, 441, 1241, 2612
XagI CCTNNNNNAGG 1 cut(s) 1248
XapI RAATTY 5 cut(s) 226, 306, 1161, 1407, 2356
XbaI TCTAGA 1 cut(s) 2215
XceI RCATGY 4 cut(s) 673, 1328, 2276, 2510
XcmI CCANNNNNNNNNTGG 3 cut(s) 205, 1740, 2469
XmiI GTMKAC 2 cut(s) 1622, 2332
XmnI GAANNNNTTC 2 cut(s) 1027, 3039
XspI CTAG 6 cut(s) 539, 1404, 2216, 2748, 3107, 3254
Zsp2I ATGCAT 3 cut(s) 671, 1910, 2164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.