ARM repeat superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17340 AT3G17340 |
| fragaria_vesca | FvH4_4g21110 FvH4_4g21110 FvH4_4g21110 |
| malus_domestica | MD15G1386700.v1.1 MD16G1139700.v1.1 |
| prunus_persica | Prupe.1G109100_v2.0.a1 |
| pyrus_communis | pycom16g12390 |
| rosa_chinensis | RchiOBHm_Chr4g0426661 |
| rosa_laevigata | RLG00000007286 |
| rosa_multiflora | Rmu_sc0001821.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00368660 |
| rosa_rugosa | Rorug04G0214000 Rorug04G0214100 |
| rosa_samantha | Rh4AG269200 Rh4BG275500 Rh4CG290000 Rh4DG272500 |
| rosa_wichuraiana | Rw4G023350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1486 |
| Acc65I | GGTACC | 1 cut(s) | 795 |
| AccB1I | GGYRCC | 1 cut(s) | 795 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 791 |
| AccI | GTMKAC | 3 cut(s) | 210, 1594, 2332 |
| AccIII | TCCGGA | 1 cut(s) | 324 |
| AclI | AACGTT | 1 cut(s) | 2407 |
| AclWI | GGATC | 3 cut(s) | 335, 763, 1188 |
| AcsI | RAATTY | 6 cut(s) | 226, 306, 358, 1407, 2356, 3035 |
| AcuI | CTGAAG | 6 cut(s) | 452, 1620, 1943, 2688, 3048, 3075 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 791, 1104, 1250, 1658, 1984, 3124 |
| AflIII | ACRYGT | 2 cut(s) | 994, 2506 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 45 |
| AjnI | CCWGG | 4 cut(s) | 1012, 2608, 2717, 2761 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1392, 1424, 2534, 2566 |
| Alw21I | GWGCWC | 1 cut(s) | 1802 |
| Alw26I | GTCTC | 3 cut(s) | 32, 2522, 3017 |
| AlwI | GGATC | 3 cut(s) | 335, 763, 1188 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 31 |
| Ama87I | CYCGRG | 1 cut(s) | 2780 |
| Aor13HI | TCCGGA | 1 cut(s) | 324 |
| AoxI | GGCC | 4 cut(s) | 365, 1010, 1931, 2445 |
| ApoI | RAATTY | 6 cut(s) | 226, 306, 358, 1407, 2356, 3035 |
| AseI | ATTAAT | 2 cut(s) | 450, 1209 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 191, 3036 |
| Asp718I | GGTACC | 1 cut(s) | 795 |
| AspLEI | GCGC | 1 cut(s) | 62 |
| AspS9I | GGNCC | 6 cut(s) | 259, 366, 1010, 1241, 1975, 2612 |
| AsuC2I | CCSGG | 1 cut(s) | 3119 |
| AsuHPI | GGTGA | 3 cut(s) | 2012, 2138, 3110 |
| AvaI | CYCGRG | 1 cut(s) | 2780 |
| AvaII | GGWCC | 4 cut(s) | 259, 1241, 1975, 2612 |
| BaeGI | GKGCMC | 1 cut(s) | 570 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2421, 2454, 2706, 2739 |
| BanI | GGYRCC | 1 cut(s) | 795 |
| BanII | GRGCYC | 1 cut(s) | 1802 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2880, 2912, 3165, 3197 |
| BauI | CACGAG | 1 cut(s) | 1506 |
| BbsI | GAAGAC | 3 cut(s) | 818, 2937, 3120 |
| Bbv12I | GWGCWC | 1 cut(s) | 1802 |
| BceAI | ACGGC | 2 cut(s) | 47, 2840 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2255, 2289, 3070, 3104 |
| BciT130I | CCWGG | 4 cut(s) | 1014, 2610, 2719, 2763 |
| BciVI | GTATCC | 2 cut(s) | 1039, 1087 |
| BclI | TGATCA | 1 cut(s) | 2992 |
| BcnI | CCSGG | 1 cut(s) | 3119 |
| BcoDI | GTCTC | 3 cut(s) | 32, 2522, 3017 |
| BfaI | CTAG | 8 cut(s) | 198, 539, 1404, 2061, 2216, 3146, 3251, 3291 |
| BfmI | CTRYAG | 1 cut(s) | 281 |
| BfoI | RGCGCY | 1 cut(s) | 63 |
| BfuAI | ACCTGC | 1 cut(s) | 1486 |
| BfuI | GTATCC | 2 cut(s) | 1039, 1087 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1744 |
| BlpI | GCTNAGC | 1 cut(s) | 24 |
| Bme1390I | CCNGG | 5 cut(s) | 1014, 2610, 2719, 2763, 3119 |
| Bme18I | GGWCC | 4 cut(s) | 259, 1241, 1975, 2612 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 45 |
| BmeT110I | CYCGRG | 1 cut(s) | 2780 |
| BmgT120I | GGNCC | 6 cut(s) | 259, 366, 1010, 1241, 1975, 2612 |
| BmiI | GGNNCC | 3 cut(s) | 522, 797, 1242 |
| BmrFI | CCNGG | 5 cut(s) | 1014, 2610, 2719, 2763, 3119 |
| BmrI | ACTGGG | 2 cut(s) | 825, 1576 |
| BmsI | GCATC | 7 cut(s) | 873, 1105, 1595, 1917, 2171, 2900, 3244 |
| BmuI | ACTGGG | 2 cut(s) | 825, 1576 |
| BpiI | GAAGAC | 3 cut(s) | 818, 2937, 3120 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2468, 2500 |
| BpmI | CTGGAG | 3 cut(s) | 1192, 2370, 3206 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 24 |
| BpuEI | CTTGAG | 1 cut(s) | 1619 |
| BpuMI | CCSGG | 1 cut(s) | 3119 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1027, 2991 |
| BsaJI | CCNNGG | 6 cut(s) | 516, 1827, 1928, 2718, 2731, 3069 |
| BsaWI | WCCGGW | 1 cut(s) | 324 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 791, 1104, 1250, 1658, 1984, 3124 |
| Bse118I | RCCGGY | 1 cut(s) | 140 |
| Bse1I | ACTGG | 5 cut(s) | 820, 1571, 1978, 2273, 2811 |
| Bse3DI | GCAATG | 2 cut(s) | 1628, 2055 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1027, 2991 |
| BseAI | TCCGGA | 1 cut(s) | 324 |
| BseBI | CCWGG | 4 cut(s) | 1014, 2610, 2719, 2763 |
| BseDI | CCNNGG | 6 cut(s) | 516, 1827, 1928, 2718, 2731, 3069 |
| BseGI | GGATG | 9 cut(s) | 1022, 1280, 1394, 1586, 1621, 1908, 2701, 2959, 3013 |
| BseJI | GATNNNNATC | 2 cut(s) | 1027, 2991 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 791, 1104, 1250, 1658, 1984, 3124 |
| BseMI | GCAATG | 2 cut(s) | 1628, 2055 |
| BseNI | ACTGG | 5 cut(s) | 820, 1571, 1978, 2273, 2811 |
| BseRI | GAGGAG | 2 cut(s) | 116, 2027 |
| BseSI | GKGCMC | 1 cut(s) | 570 |
| BsgI | GTGCAG | 1 cut(s) | 826 |
| Bsh1285I | CGRYCG | 2 cut(s) | 78, 91 |
| BshFI | GGCC | 4 cut(s) | 367, 1012, 1933, 2447 |
| BshNI | GGYRCC | 1 cut(s) | 795 |
| BsiEI | CGRYCG | 2 cut(s) | 78, 91 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1802 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2780 |
| BsiSI | CCGG | 3 cut(s) | 141, 325, 3118 |
| BslFI | GGGAC | 5 cut(s) | 1254, 1267, 1725, 2382, 2495 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 791, 1104, 1250, 1658, 1984, 3124 |
| BsmAI | GTCTC | 3 cut(s) | 32, 2522, 3017 |
| BsmFI | GGGAC | 5 cut(s) | 1254, 1267, 1725, 2382, 2495 |
| BsmI | GAATGC | 7 cut(s) | 581, 868, 2107, 2379, 2873, 3221, 3286 |
| BsnI | GGCC | 4 cut(s) | 367, 1012, 1933, 2447 |
| BsoBI | CYCGRG | 1 cut(s) | 2780 |
| Bsp1286I | GDGCHC | 2 cut(s) | 570, 1802 |
| Bsp13I | TCCGGA | 1 cut(s) | 324 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 24 |
| Bsp19I | CCATGG | 1 cut(s) | 1928 |
| BspANI | GGCC | 4 cut(s) | 367, 1012, 1933, 2447 |
| BspEI | TCCGGA | 1 cut(s) | 324 |
| BspHI | TCATGA | 1 cut(s) | 733 |
| BspLI | GGNNCC | 3 cut(s) | 522, 797, 1242 |
| BspMAI | CTGCAG | 1 cut(s) | 285 |
| BspMI | ACCTGC | 1 cut(s) | 1486 |
| BspPI | GGATC | 3 cut(s) | 335, 763, 1188 |
| BspT107I | GGYRCC | 1 cut(s) | 795 |
| BsrDI | GCAATG | 2 cut(s) | 1628, 2055 |
| BsrFI | RCCGGY | 1 cut(s) | 140 |
| BsrI | ACTGG | 5 cut(s) | 820, 1571, 1978, 2273, 2811 |
| BssAI | RCCGGY | 1 cut(s) | 140 |
| BssECI | CCNNGG | 6 cut(s) | 516, 1827, 1928, 2718, 2731, 3069 |
| BssSI | CACGAG | 1 cut(s) | 1506 |
| BssT1I | CCWWGG | 3 cut(s) | 516, 1928, 3069 |
| Bst2BI | CACGAG | 1 cut(s) | 1506 |
| Bst2UI | CCWGG | 4 cut(s) | 1014, 2610, 2719, 2763 |
| Bst4CI | ACNGT | 3 cut(s) | 215, 682, 1545 |
| Bst6I | CTCTTC | 4 cut(s) | 1596, 1788, 3015, 3087 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3065 |
| BstC8I | GCNNGC | 7 cut(s) | 273, 1584, 2274, 2482, 2606, 2637, 2802 |
| BstDSI | CCRYGG | 2 cut(s) | 1827, 1928 |
| BstF5I | GGATG | 9 cut(s) | 1022, 1280, 1394, 1586, 1621, 1908, 2701, 2959, 3013 |
| BstH2I | RGCGCY | 1 cut(s) | 63 |
| BstHHI | GCGC | 1 cut(s) | 62 |
| BstMAI | GTCTC | 3 cut(s) | 32, 2522, 3017 |
| BstMCI | CGRYCG | 2 cut(s) | 78, 91 |
| BstNI | CCWGG | 4 cut(s) | 1014, 2610, 2719, 2763 |
| BstNSI | RCATGY | 3 cut(s) | 998, 2276, 2510 |
| BstSCI | CCNGG | 5 cut(s) | 1012, 2608, 2717, 2761, 3117 |
| BstSFI | CTRYAG | 1 cut(s) | 281 |
| BstSLI | GKGCMC | 1 cut(s) | 570 |
| BstV2I | GAAGAC | 3 cut(s) | 818, 2937, 3120 |
| BstX2I | RGATCY | 2 cut(s) | 755, 1180 |
| BstYI | RGATCY | 2 cut(s) | 755, 1180 |
| BsuI | GTATCC | 2 cut(s) | 1039, 1087 |
| BsuRI | GGCC | 4 cut(s) | 367, 1012, 1933, 2447 |
| BtgI | CCRYGG | 2 cut(s) | 1827, 1928 |
| BtsCI | GGATG | 9 cut(s) | 1022, 1280, 1394, 1586, 1621, 1908, 2701, 2959, 3013 |
| BtsI | GCAGTG | 1 cut(s) | 1557 |
| BtsIMutI | CAGTG | 6 cut(s) | 1236, 1281, 1539, 1557, 2804, 2879 |
| BveI | ACCTGC | 1 cut(s) | 1486 |
| Cac8I | GCNNGC | 7 cut(s) | 273, 1584, 2274, 2482, 2606, 2637, 2802 |
| CaiI | CAGNNNCTG | 1 cut(s) | 31 |
| CciI | TCATGA | 1 cut(s) | 733 |
| CfoI | GCGC | 1 cut(s) | 62 |
| Cfr10I | RCCGGY | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 6 cut(s) | 259, 366, 1010, 1241, 1975, 2612 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 612, 647 |
| DriI | GACNNNNNGTC | 1 cut(s) | 45 |
| Eam1104I | CTCTTC | 4 cut(s) | 1596, 1788, 3015, 3087 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 4 cut(s) | 1596, 1788, 3015, 3087 |
| EciI | GGCGGA | 1 cut(s) | 2825 |
| Ecl136II | GAGCTC | 1 cut(s) | 1800 |
| Eco130I | CCWWGG | 3 cut(s) | 516, 1928, 3069 |
| Eco24I | GRGCYC | 1 cut(s) | 1802 |
| Eco47I | GGWCC | 4 cut(s) | 259, 1241, 1975, 2612 |
| Eco53kI | GAGCTC | 1 cut(s) | 1800 |
| Eco57I | CTGAAG | 6 cut(s) | 452, 1620, 1943, 2688, 3048, 3075 |
| Eco88I | CYCGRG | 1 cut(s) | 2780 |
| EcoICRI | GAGCTC | 1 cut(s) | 1800 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1241 |
| EcoRI | GAATTC | 3 cut(s) | 226, 358, 1407 |
| EcoRII | CCWGG | 4 cut(s) | 1012, 2608, 2717, 2761 |
| EcoT14I | CCWWGG | 3 cut(s) | 516, 1928, 3069 |
| EcoT22I | ATGCAT | 3 cut(s) | 671, 1910, 2109 |
| EcoT38I | GRGCYC | 1 cut(s) | 1802 |
| ErhI | CCWWGG | 3 cut(s) | 516, 1928, 3069 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3048, 3080 |
| FaqI | GGGAC | 5 cut(s) | 1254, 1267, 1725, 2382, 2495 |
| FauI | CCCGC | 2 cut(s) | 1677, 3234 |
| FauNDI | CATATG | 2 cut(s) | 693, 1441 |
| FbaI | TGATCA | 1 cut(s) | 2992 |
| FblI | GTMKAC | 3 cut(s) | 210, 1594, 2332 |
| FokI | GGATG | 9 cut(s) | 1029, 1267, 1381, 1573, 1628, 1895, 2708, 2966, 3020 |
| FriOI | GRGCYC | 1 cut(s) | 1802 |
| FspBI | CTAG | 8 cut(s) | 198, 539, 1404, 2061, 2216, 3146, 3251, 3291 |
| GlaI | GCGC | 1 cut(s) | 61 |
| GsuI | CTGGAG | 3 cut(s) | 1192, 2370, 3206 |
| HaeII | RGCGCY | 1 cut(s) | 63 |
| HaeIII | GGCC | 4 cut(s) | 367, 1012, 1933, 2447 |
| HapII | CCGG | 3 cut(s) | 141, 325, 3118 |
| HhaI | GCGC | 1 cut(s) | 62 |
| Hin6I | GCGC | 1 cut(s) | 60 |
| HinP1I | GCGC | 1 cut(s) | 60 |
| HincII | GTYRAC | 2 cut(s) | 211, 576 |
| HindII | GTYRAC | 2 cut(s) | 211, 576 |
| HinfI | GANTC | 9 cut(s) | 40, 463, 964, 1055, 2006, 2021, 2156, 2285, 2999 |
| HpaI | GTTAAC | 1 cut(s) | 576 |
| HpaII | CCGG | 3 cut(s) | 141, 325, 3118 |
| HphI | GGTGA | 3 cut(s) | 2012, 2138, 3110 |
| Hpy166II | GTNNAC | 4 cut(s) | 211, 576, 1595, 2333 |
| Hpy8I | GTNNAC | 4 cut(s) | 211, 576, 1595, 2333 |
| HpyAV | CCTTC | 9 cut(s) | 659, 732, 1389, 1766, 2117, 2414, 2472, 2528, 2686 |
| HpyCH4III | ACNGT | 3 cut(s) | 215, 682, 1545 |
| HpyCH4IV | ACGT | 2 cut(s) | 240, 2407 |
| HpySE526I | ACGT | 2 cut(s) | 240, 2407 |
| HspAI | GCGC | 1 cut(s) | 60 |
| Kpn2I | TCCGGA | 1 cut(s) | 324 |
| KpnI | GGTACC | 1 cut(s) | 799 |
| Ksp22I | TGATCA | 1 cut(s) | 2992 |
| KspAI | GTTAAC | 1 cut(s) | 576 |
| LmnI | GCTCC | 4 cut(s) | 108, 520, 2178, 2395 |
| LweI | GCATC | 7 cut(s) | 873, 1105, 1595, 1917, 2171, 2900, 3244 |
| MaeI | CTAG | 8 cut(s) | 198, 539, 1404, 2061, 2216, 3146, 3251, 3291 |
| MaeII | ACGT | 2 cut(s) | 240, 2407 |
| MaeIII | GTNAC | 9 cut(s) | 47, 407, 778, 1512, 2050, 2194, 2516, 2859, 3177 |
| MfeI | CAATTG | 3 cut(s) | 1247, 1332, 2556 |
| MflI | RGATCY | 2 cut(s) | 755, 1180 |
| MhlI | GDGCHC | 2 cut(s) | 570, 1802 |
| MlyI | GAGTC | 2 cut(s) | 34, 1049 |
| MmeI | TCCRAC | 1 cut(s) | 1032 |
| Mph1103I | ATGCAT | 3 cut(s) | 671, 1910, 2109 |
| MroI | TCCGGA | 1 cut(s) | 324 |
| MroXI | GAANNNNTTC | 2 cut(s) | 191, 3036 |
| MslI | CAYNNNNRTG | 1 cut(s) | 563 |
| MspA1I | CMGCKG | 1 cut(s) | 28 |
| MspI | CCGG | 3 cut(s) | 141, 325, 3118 |
| MspR9I | CCNGG | 5 cut(s) | 1014, 2610, 2719, 2763, 3119 |
| MunI | CAATTG | 3 cut(s) | 1247, 1332, 2556 |
| Mva1269I | GAATGC | 7 cut(s) | 581, 868, 2107, 2379, 2873, 3221, 3286 |
| MvaI | CCWGG | 4 cut(s) | 1014, 2610, 2719, 2763 |
| NciI | CCSGG | 1 cut(s) | 3119 |
| NcoI | CCATGG | 1 cut(s) | 1928 |
| NdeI | CATATG | 2 cut(s) | 693, 1441 |
| NlaIV | GGNNCC | 3 cut(s) | 522, 797, 1242 |
| NmuCI | GTSAC | 2 cut(s) | 47, 3177 |
| NsiI | ATGCAT | 3 cut(s) | 671, 1910, 2109 |
| NspI | RCATGY | 3 cut(s) | 998, 2276, 2510 |
| PacI | TTAATTAA | 1 cut(s) | 417 |
| PaeI | GCATGC | 1 cut(s) | 2276 |
| PagI | TCATGA | 1 cut(s) | 733 |
| PciI | ACATGT | 2 cut(s) | 994, 2506 |
| PctI | GAATGC | 7 cut(s) | 581, 868, 2107, 2379, 2873, 3221, 3286 |
| PdmI | GAANNNNTTC | 2 cut(s) | 191, 3036 |
| PfeI | GAWTC | 7 cut(s) | 463, 964, 2006, 2021, 2156, 2285, 2999 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 791 |
| Ple19I | CGATCG | 1 cut(s) | 91 |
| PleI | GAGTC | 2 cut(s) | 34, 1049 |
| PpsI | GAGTC | 2 cut(s) | 34, 1049 |
| PpuMI | RGGWCCY | 1 cut(s) | 1241 |
| PscI | ACATGT | 2 cut(s) | 994, 2506 |
| PshBI | ATTAAT | 2 cut(s) | 450, 1209 |
| Psp124BI | GAGCTC | 1 cut(s) | 1802 |
| Psp1406I | AACGTT | 1 cut(s) | 2407 |
| Psp5II | RGGWCCY | 1 cut(s) | 1241 |
| Psp6I | CCWGG | 4 cut(s) | 1012, 2608, 2717, 2761 |
| PspGI | CCWGG | 4 cut(s) | 1012, 2608, 2717, 2761 |
| PspN4I | GGNNCC | 3 cut(s) | 522, 797, 1242 |
| PspPI | GGNCC | 6 cut(s) | 259, 366, 1010, 1241, 1975, 2612 |
| PspPPI | RGGWCCY | 1 cut(s) | 1241 |
| PstI | CTGCAG | 1 cut(s) | 285 |
| PstNI | CAGNNNCTG | 1 cut(s) | 31 |
| PsuI | RGATCY | 2 cut(s) | 755, 1180 |
| PvuI | CGATCG | 1 cut(s) | 91 |
| PvuII | CAGCTG | 1 cut(s) | 28 |
| RseI | CAYNNNNRTG | 1 cut(s) | 563 |
| SacI | GAGCTC | 1 cut(s) | 1802 |
| SalI | GTCGAC | 1 cut(s) | 209 |
| Sau96I | GGNCC | 6 cut(s) | 259, 366, 1010, 1241, 1975, 2612 |
| SchI | GAGTC | 2 cut(s) | 34, 1049 |
| ScrFI | CCNGG | 5 cut(s) | 1014, 2610, 2719, 2763, 3119 |
| SduI | GDGCHC | 2 cut(s) | 570, 1802 |
| SfaNI | GCATC | 7 cut(s) | 873, 1105, 1595, 1917, 2171, 2900, 3244 |
| SfcI | CTRYAG | 1 cut(s) | 281 |
| SgrAI | CRCCGGYG | 1 cut(s) | 140 |
| SinI | GGWCC | 4 cut(s) | 259, 1241, 1975, 2612 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 563 |
| SmlI | CTYRAG | 1 cut(s) | 1634 |
| SmoI | CTYRAG | 1 cut(s) | 1634 |
| SphI | GCATGC | 1 cut(s) | 2276 |
| SspMI | CTAG | 8 cut(s) | 198, 539, 1404, 2061, 2216, 3146, 3251, 3291 |
| SstI | GAGCTC | 1 cut(s) | 1802 |
| StyD4I | CCNGG | 5 cut(s) | 1012, 2608, 2717, 2761, 3117 |
| StyI | CCWWGG | 3 cut(s) | 516, 1928, 3069 |
| TaaI | ACNGT | 3 cut(s) | 215, 682, 1545 |
| TaiI | ACGT | 2 cut(s) | 243, 2410 |
| TaqI | TCGA | 7 cut(s) | 87, 210, 856, 1901, 2976, 3090, 3242 |
| TaqII | GACCGA | 1 cut(s) | 92 |
| TatI | WGTACW | 2 cut(s) | 1125, 2209 |
| TauI | GCSGC | 3 cut(s) | 176, 1703, 2450 |
| TfiI | GAWTC | 7 cut(s) | 463, 964, 2006, 2021, 2156, 2285, 2999 |
| TscAI | CASTG | 6 cut(s) | 1236, 1281, 1539, 1564, 2811, 2886 |
| TseFI | GTSAC | 2 cut(s) | 47, 3177 |
| Tsp45I | GTSAC | 2 cut(s) | 47, 3177 |
| TspGWI | ACGGA | 3 cut(s) | 1628, 1816, 2949 |
| TspRI | CASTG | 6 cut(s) | 1236, 1281, 1539, 1564, 2811, 2886 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 791 |
| VpaK11BI | GGWCC | 4 cut(s) | 259, 1241, 1975, 2612 |
| VspI | ATTAAT | 2 cut(s) | 450, 1209 |
| XapI | RAATTY | 6 cut(s) | 226, 306, 358, 1407, 2356, 3035 |
| XbaI | TCTAGA | 1 cut(s) | 2215 |
| XceI | RCATGY | 3 cut(s) | 998, 2276, 2510 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1740 |
| XmiI | GTMKAC | 3 cut(s) | 210, 1594, 2332 |
| XmnI | GAANNNNTTC | 2 cut(s) | 191, 3036 |
| XspI | CTAG | 8 cut(s) | 198, 539, 1404, 2061, 2216, 3146, 3251, 3291 |
| Zsp2I | ATGCAT | 3 cut(s) | 671, 1910, 2109 |