AT3G18850

Acyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009022
Physical Location & Seq
Reverse (-)
6499332 .. 6501432
2101 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G18850.6

Sequence Viewer

Length: 1128 bp
ATGGAAAAAAAGAGTGTACCAAATTCTGATAAGTTGTCTCTGATTAGAGTGTTAAGAGGTATAATATGTCTGATGGTGTTAGTTTCAACAGCTTTTATGATGTTGATATTCTGGGGGTTCTTATCAGCTGTAGTGTTGAGGCTTTTCAGCATTCGCTATAGCCGTAAATGTGTTTCCTTCTTCTTTGGCTCGTGGCTCGCCTTGTGGCCTTTCCTCTTTGAGAAGATTAACAAAACCAAAGTTATCTTCTCTGGTGATAAGGTTCCTTGCGAGGATCGAGTATTGCTCATTGCAAACCACCGAACAGAAGTTGATTGGATGTACTTCTGGGATCTTGCACTGCGTAAAGGCCAGATTGGGAATATCAAATATGTGCTTAAGAGTAGTTTGATGAAATTACCTCTCTTTGGTTGGGCGTTTCACCTCTTTGAGTTTATTCCAGTTGAGAGGAGATGGGAAGTCGATGAAGCAAACTTGAGACAGATAGTTTCGAGTTTTAAGGATCCCCGAGACGCTTTATGGCTTGCTCTTTTCCCCGAGGGCACAGATTACACAGAGGCTAAATGCCAAAGGAGTAAGAAATTTGCTGCTGAAAATGGCCTTCCGATACTGAACAACGTGCTGCTTCCCAGGACAAAAGGTTTCGTCTCCTGCTTGCAAGAACTGAGTTGCTCACTTGACGCAGTTTATGATGTGACCATCGGTTATAAAACCCGCTGCCCATCTTTCTTAGACAACGTTTATGGAATTGAGCCATCAGAAGTTCACATCCACATCCGTCGTATCAACCTGACCCAAATCCCAAATCAAGAAAAGGACATCAATGCTTGGTTAATGAACACATTCCAGCTCAAAGACCAGCTGCTCAATGACTTTTACTCCAATGGTCATTTCCCTAACGAAGGAACAGAGAAAGAGTTCAACACAAAGAAGTACCTCATAAACTGTTTGGCAGTGATTGCCTTCACCACCATCTGTACACATCTCACCTTCTTCTCATCAATGATTTGGTTCAGGATTTATGTCTCTTTGGCCTGTGTCTACTTGACCTCTGCTACGCATTTCAATCTTCGTTCTGTTCCACTTGTTGAGACTGCAAAAAATTCCCTCAAATTAGTAAACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110
Pfam Domains
Protein Families
Acyltransf_C Acyltransferase

Protein Analysis

375

Amino Acids

43.49

Weight (kDa)

9.12

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransf_C PF16076 116 - 186 5.3e-19 Acyltransferase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009022)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18850 AT3G18850 AT3G18850 AT3G18850 AT3G18850 AT3G18850
fragaria_vesca FvH4_2g08140
malus_domestica MD10G1081700.v1.1
prunus_persica Prupe.8G103400_v2.0.a1 Prupe.8G103400_v2.0.a1
pyrus_communis pycom10g06460
rosa_chinensis RchiOBHm_Chr6g0262951
rosa_laevigata RLG00000014390 RLG00000014405
rosa_multiflora Rmu_co8164910.1_g000001
rosa_roxburghii Rroxscaffold_7G00204850
rosa_rugosa Rorug06G0001800
rosa_samantha Rh6AG121200 Rh6BG114800 Rh6CG113200 Rh6DG102500
rosa_wichuraiana Rw6G010400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 708
AccI GTMKAC 1 cut(s) 1041
AciI CCGC 1 cut(s) 715
AclI AACGTT 1 cut(s) 738
AclWI GGATC 4 cut(s) 282, 339, 497, 510
AcsI RAATTY 3 cut(s) 22, 581, 1102
AfaI GTAC 4 cut(s) 18, 323, 935, 979
AfiI CCNNNNNNNGG 2 cut(s) 407, 902
AflII CTTAAG 1 cut(s) 377
AgsI TTSAA 3 cut(s) 87, 922, 1066
AjnI CCWGG 1 cut(s) 629
AjuI GAANNNNNNNTTGG 4 cut(s) 230, 262, 875, 907
AluBI AGCT 4 cut(s) 92, 128, 850, 862
AluI AGCT 4 cut(s) 92, 128, 850, 862
Alw26I GTCTC 6 cut(s) 42, 472, 504, 652, 1030, 1085
AlwI GGATC 4 cut(s) 282, 339, 497, 510
Ama87I CYCGRG 2 cut(s) 507, 536
AoxI GGCC 4 cut(s) 206, 349, 598, 1032
ApeKI GCWGC 4 cut(s) 587, 622, 717, 862
ApoI RAATTY 3 cut(s) 22, 581, 1102
Asp700I GAANNNNTTC 2 cut(s) 842, 917
AsuHPI GGTGA 4 cut(s) 266, 413, 958, 979
AvaI CYCGRG 2 cut(s) 507, 536
BaeGI GKGCMC 1 cut(s) 545
BamHI GGATCC 1 cut(s) 502
BauI CACGAG 1 cut(s) 190
BbvI GCAGC 4 cut(s) 574, 609, 704, 849
BccI CCATC 6 cut(s) 67, 447, 707, 730, 763, 980
BceAI ACGGC 1 cut(s) 147
BciT130I CCWGG 1 cut(s) 631
BcoDI GTCTC 6 cut(s) 42, 472, 504, 652, 1030, 1085
BfmI CTRYAG 2 cut(s) 129, 157
BfrI CTTAAG 1 cut(s) 377
BisI GCNGC 4 cut(s) 588, 623, 718, 863
BlsI GCNGC 4 cut(s) 589, 624, 719, 864
Bme1390I CCNGG 1 cut(s) 631
BmeT110I CYCGRG 2 cut(s) 507, 536
BmiI GGNNCC 2 cut(s) 264, 504
BmrFI CCNGG 1 cut(s) 631
BplI GAGNNNNNCTC 2 cut(s) 270, 302
BpuEI CTTGAG 1 cut(s) 496
BsaJI CCNNGG 2 cut(s) 537, 629
BsaXI ACNNNNNCTCC 2 cut(s) 863, 893
Bsc4I CCNNNNNNNGG 2 cut(s) 407, 902
Bse1I ACTGG 1 cut(s) 440
Bse3DI GCAATG 1 cut(s) 288
BseBI CCWGG 1 cut(s) 631
BseDI CCNNGG 2 cut(s) 537, 629
BseGI GGATG 3 cut(s) 324, 768, 774
BseLI CCNNNNNNNGG 2 cut(s) 407, 902
BseMI GCAATG 1 cut(s) 288
BseMII CTCAG 1 cut(s) 656
BseNI ACTGG 1 cut(s) 440
BseRI GAGGAG 1 cut(s) 463
BseSI GKGCMC 1 cut(s) 545
BseXI GCAGC 4 cut(s) 574, 609, 704, 849
BshFI GGCC 4 cut(s) 208, 351, 600, 1034
BsiHKCI CYCGRG 2 cut(s) 507, 536
BslI CCNNNNNNNGG 2 cut(s) 407, 902
BsmAI GTCTC 6 cut(s) 42, 472, 504, 652, 1030, 1085
BsmBI CGTCTC 2 cut(s) 504, 652
BsmI GAATGC 1 cut(s) 150
BsnI GGCC 4 cut(s) 208, 351, 600, 1034
BsoBI CYCGRG 2 cut(s) 507, 536
Bsp1286I GDGCHC 1 cut(s) 545
Bsp1407I TGTACA 1 cut(s) 977
Bsp143I GATC 3 cut(s) 274, 331, 502
BspACI CCGC 1 cut(s) 715
BspANI GGCC 4 cut(s) 208, 351, 600, 1034
BspCNI CTCAG 1 cut(s) 657
BspLI GGNNCC 2 cut(s) 264, 504
BspPI GGATC 4 cut(s) 282, 339, 497, 510
BspTI CTTAAG 1 cut(s) 377
BsrDI GCAATG 1 cut(s) 288
BsrGI TGTACA 1 cut(s) 977
BsrI ACTGG 1 cut(s) 440
BssECI CCNNGG 2 cut(s) 537, 629
BssMI GATC 3 cut(s) 274, 331, 502
BssSI CACGAG 1 cut(s) 190
Bst2BI CACGAG 1 cut(s) 190
Bst2UI CCWGG 1 cut(s) 631
Bst4CI ACNGT 1 cut(s) 947
BstAFI CTTAAG 1 cut(s) 377
BstAPI GCANNNNNTGC 1 cut(s) 959
BstAUI TGTACA 1 cut(s) 977
BstC8I GCNNGC 3 cut(s) 198, 525, 656
BstDEI CTNAG 2 cut(s) 665, 730
BstENI CCTNNNNNAGG 1 cut(s) 900
BstF5I GGATG 3 cut(s) 324, 768, 774
BstKTI GATC 3 cut(s) 277, 334, 505
BstMAI GTCTC 6 cut(s) 42, 472, 504, 652, 1030, 1085
BstMBI GATC 3 cut(s) 274, 331, 502
BstMWI GCNNNNNNNGC 1 cut(s) 959
BstNI CCWGG 1 cut(s) 631
BstSCI CCNGG 1 cut(s) 629
BstSFI CTRYAG 2 cut(s) 129, 157
BstSLI GKGCMC 1 cut(s) 545
BstV1I GCAGC 4 cut(s) 574, 609, 704, 849
BstX2I RGATCY 2 cut(s) 331, 502
BstYI RGATCY 2 cut(s) 331, 502
BsuRI GGCC 4 cut(s) 208, 351, 600, 1034
BtsCI GGATG 3 cut(s) 324, 768, 774
BtsI GCAGTG 2 cut(s) 338, 960
BtsIMutI CAGTG 2 cut(s) 338, 960
Cac8I GCNNGC 3 cut(s) 198, 525, 656
CseI GACGC 2 cut(s) 521, 689
Csp6I GTAC 4 cut(s) 17, 322, 934, 978
CviQI GTAC 4 cut(s) 17, 322, 934, 978
DdeI CTNAG 2 cut(s) 665, 730
DpnI GATC 3 cut(s) 276, 333, 504
DpnII GATC 3 cut(s) 274, 331, 502
Eco88I CYCGRG 2 cut(s) 507, 536
EcoNI CCTNNNNNAGG 1 cut(s) 900
EcoRII CCWGG 1 cut(s) 629
Esp3I CGTCTC 2 cut(s) 504, 652
FauI CCCGC 1 cut(s) 722
FblI GTMKAC 1 cut(s) 1041
Fnu4HI GCNGC 4 cut(s) 588, 623, 718, 863
FokI GGATG 3 cut(s) 331, 755, 761
Fsp4HI GCNGC 4 cut(s) 588, 623, 718, 863
GluI GCNGC 4 cut(s) 588, 623, 718, 863
HaeIII GGCC 4 cut(s) 208, 351, 600, 1034
HgaI GACGC 2 cut(s) 521, 689
HphI GGTGA 4 cut(s) 266, 413, 958, 979
Hpy166II GTNNAC 5 cut(s) 17, 766, 980, 1042, 1120
Hpy188I TCNGA 5 cut(s) 28, 42, 72, 606, 760
Hpy188III TCNNGA 2 cut(s) 809, 1015
Hpy8I GTNNAC 5 cut(s) 17, 766, 980, 1042, 1120
Hpy99I CGWCG 1 cut(s) 783
HpyAV CCTTC 5 cut(s) 187, 611, 896, 973, 1000
HpyCH4III ACNGT 1 cut(s) 947
HpyCH4IV ACGT 2 cut(s) 618, 738
HpyCH4V TGCA 4 cut(s) 293, 338, 658, 1097
HpyF10VI GCNNNNNNNGC 1 cut(s) 959
HpyF3I CTNAG 2 cut(s) 665, 730
HpySE526I ACGT 2 cut(s) 618, 738
Kzo9I GATC 3 cut(s) 274, 331, 502
Lsp1109I GCAGC 4 cut(s) 574, 609, 704, 849
MaeII ACGT 2 cut(s) 618, 738
MaeIII GTNAC 1 cut(s) 694
MalI GATC 3 cut(s) 276, 333, 504
MboI GATC 3 cut(s) 274, 331, 502
MboII GAAGA 5 cut(s) 172, 235, 238, 985, 1061
MflI RGATCY 2 cut(s) 331, 502
MhlI GDGCHC 1 cut(s) 545
MluCI AATT 6 cut(s) 22, 395, 581, 747, 1102, 1112
MroXI GAANNNNTTC 2 cut(s) 842, 917
MseI TTAA 5 cut(s) 53, 228, 378, 498, 833
MspA1I CMGCKG 3 cut(s) 128, 717, 862
MspCI CTTAAG 1 cut(s) 377
MspR9I CCNGG 1 cut(s) 631
Mva1269I GAATGC 1 cut(s) 150
MvaI CCWGG 1 cut(s) 631
MwoI GCNNNNNNNGC 1 cut(s) 959
NdeII GATC 3 cut(s) 274, 331, 502
NlaIV GGNNCC 2 cut(s) 264, 504
NmuCI GTSAC 1 cut(s) 694
PcsI WCGNNNNNNNCGW 1 cut(s) 160
PctI GAATGC 1 cut(s) 150
PdmI GAANNNNTTC 2 cut(s) 842, 917
PkrI GCNGC 4 cut(s) 589, 624, 719, 864
PsiI TTATAA 1 cut(s) 708
Psp1406I AACGTT 1 cut(s) 738
Psp6I CCWGG 1 cut(s) 629
PspGI CCWGG 1 cut(s) 629
PspN4I GGNNCC 2 cut(s) 264, 504
PsuI RGATCY 2 cut(s) 331, 502
PvuII CAGCTG 2 cut(s) 128, 862
RsaI GTAC 4 cut(s) 18, 323, 935, 979
RsaNI GTAC 4 cut(s) 17, 322, 934, 978
SaqAI TTAA 5 cut(s) 53, 228, 378, 498, 833
SatI GCNGC 4 cut(s) 588, 623, 718, 863
Sau3AI GATC 3 cut(s) 274, 331, 502
ScrFI CCNGG 1 cut(s) 631
SduI GDGCHC 1 cut(s) 545
SfcI CTRYAG 2 cut(s) 129, 157
SmlI CTYRAG 2 cut(s) 377, 475
SmoI CTYRAG 2 cut(s) 377, 475
Sse9I AATT 6 cut(s) 22, 395, 581, 747, 1102, 1112
SsiI CCGC 1 cut(s) 715
StyD4I CCNGG 1 cut(s) 629
TaaI ACNGT 1 cut(s) 947
TaiI ACGT 2 cut(s) 621, 741
TaqI TCGA 3 cut(s) 277, 462, 491
TasI AATT 6 cut(s) 22, 395, 581, 747, 1102, 1112
TatI WGTACW 2 cut(s) 321, 977
Tru1I TTAA 5 cut(s) 53, 228, 378, 498, 833
Tru9I TTAA 5 cut(s) 53, 228, 378, 498, 833
TscAI CASTG 2 cut(s) 345, 960
TseFI GTSAC 1 cut(s) 694
TseI GCWGC 4 cut(s) 587, 622, 717, 862
Tsp45I GTSAC 1 cut(s) 694
TspDTI ATGAA 3 cut(s) 407, 480, 851
TspGWI ACGGA 1 cut(s) 767
TspRI CASTG 2 cut(s) 345, 960
Vha464I CTTAAG 1 cut(s) 377
XagI CCTNNNNNAGG 1 cut(s) 900
XapI RAATTY 3 cut(s) 22, 581, 1102
XmiI GTMKAC 1 cut(s) 1041
XmnI GAANNNNTTC 2 cut(s) 842, 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.