Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016056

Physical Location & Seq

Genomic Coordinates Reverse (-)

7263900 .. 7268750

Gene Structure 4851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G20780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGCGGGTGATGATTTAGTTGAAACGAAGAAGGGAAGCTCGAAGAACTCTAAGGACAGCAACGAGAGCAAGCTCAAGCAAAAATCTCCAGCTGAGTTTTTCGCGGAGAACAAGAACATTGCTGGATTTGATAATCCAGGGAAGTCGCTTTATACTACAGTTAGAGAGCTTGTTGAAAATGCTCTTGATTCTGCAGAGTCTATTTCAGAGCTCCCTGAGGTTGAAGTAACTATCGAAGAGATTGTAAAATCTAAGTTCAACTCCATGATTGGTCTTATCGATCGGGAACGTGTTGACACACAGCTGTATGATGATTATGAGACAGAAAAGGCCCGTGGGAAAAGGTTAGCAAAGGAAGCTCGAGCCAGTGAGATACAAGCTAAAAATTTGGCATCGGGAAAGAAAAACAAAGAGCCTGGAGTATCGAAGGTTTTAAAGGCCCGTGGGGAAGCCTCATATTACAAAGTGACATGTAAGGATAATGGTAAGGGGATGCCACATGATGACATTCCAAATATGTTTGGGAGAGTTTTATCCGGGACGAAGTATGGACTGAAGCAAACACGTGGAAAGTTTGGTCTGGGTGCAAAGATGGCCTTAATCTGGTCCAAAATGAGTACAGGTCTCCCCATAGAGATCTCGTCATCTATGAAGAGCCAAAACTATGTTACTTTCTGCAGACTGGATATTGATATTCACAGGAACATTCCTCATATTCATCTGCACGAAAAGAAGGGCAACAAAGAGAAATGGCATGGGGCTGAAATACAGGTGGTTATCGAAGGAAACTGGACAACATACAGATCAAAGATCTTGCACTATATGCGCCAAATGGCTGTCATTACTCCTTATGCGCAGTTTCTGTTTAGATTTATATCAGAGACACCAGAGAAAAATGTCACTATTAAGTTTACTCGAAGAACGGATGTGATGCCCCCTATTCCTATCGAGACAAAGCACCATCCATCGTCAGTTGACTTGCTGCTTATCAAGCGCCTTATTACAGACACTTCCAAAAAGACCCTTCTGCAGTTTCTTCAAAATGAATTTGTGAATATTAACAAAACCCTTGCAGCACGATTAATTGGGGAAATGGGACCTGATTTCGGGCCTAGCATGGCTGTCAAATCTGTGACATCTCAGCAAATGGTACGCATACATCAGTTATTCCGCCAAGCTAAATTCGACGACCCTAGTGGTGATTGTCTTAGCCCAGCAGGAGAATACAATCTTCGTCTAGGGATTATTAAGGAGCTACATCCAGATATGGTGGCAACGTATTCCGGCAGTGCTCAGGTCTTCGAAGGTCATCCTTTCATTGTTGAAGCTGGTGTTAGTTTGGGTGGAAGAGACGTGAAACAGGGGATCAACATATTCCGTTTTGCAAACCGTATTCCTCTCCTTTTTGAACAAGGAGCTGATGTTGTCACCAGGACGGCCTTAAAAAGAATCAATTGGAATAGTTATAAGATCAACCAGACGCAAGATAAAATAGGAGTATTTGTGAGCATAGTGAGTACAAAAATTCCATTCAAAGGGACAGGGAAAGAGTACATAGGAGATGACATCAGTGAGATAGCTACTGCAGTCAAGTCTGCAATTCAACAATGCTGCATCCAACTGAAATCCAAAATAGTCAAGAGACTGCAAGCCCGTGAACAACAAGAGCGAAAACGCAGTTTGAGCAGATACATCCCCGATGCAACGGGGGCAGTGTACGAGGTTCTAAAACAAATGACAGAAGAACATAAAACAAAGAGAAAACGTTACGGAGAGGAAGACATAGTTATGCTTGATAAAGTATCTAAACAGATAATCACAAAAGAAACATTGAAAGAAAAGCTAGCTGAGCATGTAGAACAGGTGGACTACGAGATGGCATTAGAGTATGCAACACAAAGTGGAGTAAGTGAAGAACCCAGAGAAAATATATATCTCCAACACTTAGATCCCAACAAATCCAACTTCATAGATCTTCATAGTCCAACTTTTGTCTTCAGGCTCATGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003735 GO:0003824 GO:0003916 GO:0003918 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007389 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009330 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010467 GO:0014070 GO:0015935 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0017111 GO:0019538 GO:0022402 GO:0022613 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0033993 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042254 GO:0042623 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044446 GO:0044464 GO:0044786 GO:0046483 GO:0046983 GO:0048856 GO:0048869 GO:0050896 GO:0061505 GO:0071704 GO:0071840 GO:0090304 GO:0090558 GO:0140097 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HATPase_c_3 Topo-VIb_trans

Protein Analysis

670

Amino Acids

75.85

Weight (kDa)

9.2

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	154 - 231	3.4e-06	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Topo-VIb_trans	PF09239	398 - 557	3.4e-56	Topoisomerase VI B subunit, transducer

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20780
fragaria_vesca	FvH4_3g43550
malus_domestica	MD03G1021100.v1.1
prunus_persica	Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1
pyrus_communis	pycom03g01820
rosa_chinensis	RchiOBHm_Chr5g0078101
rosa_laevigata	RLG00000036751
rosa_multiflora	Rmu_sc0008741.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000360 Rroxscaffold_1G00004120
rosa_rugosa	Rorug05G0458500
rosa_samantha	Rh5AG513100
rosa_wichuraiana	Rw5G047590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1467
Acc16I	TGCGCA	1 cut(s)	855
AccII	CGCG	1 cut(s)	104
AciI	CCGC	3 cut(s)	5, 104, 1171
AclI	AACGTT	1 cut(s)	1765
AclWI	GGATC	2 cut(s)	1373, 1943
AcsI	RAATTY	4 cut(s)	385, 1046, 1181, 1524
AcuI	CTGAAG	2 cut(s)	575, 1981
AcvI	CACGTG	1 cut(s)	566
AdeI	CACNNNGTG	1 cut(s)	1901
AfaI	GTAC	5 cut(s)	619, 1152, 1519, 1553, 1718
AfiI	CCNNNNNNNGG	3 cut(s)	603, 1106, 1535
AflIII	ACRYGT	3 cut(s)	289, 470, 563
AjiI	CACGTC	1 cut(s)	1354
AjnI	CCWGG	3 cut(s)	136, 415, 1430
Alw21I	GWGCWC	2 cut(s)	213, 1294
Alw26I	GTCTC	6 cut(s)	314, 629, 875, 944, 1344, 1636
AlwI	GGATC	2 cut(s)	1373, 1943
AlwNI	CAGNNNCTG	1 cut(s)	862
Ama87I	CYCGRG	1 cut(s)	360
AoxI	GGCC	5 cut(s)	330, 438, 594, 1109, 1437
ApeKI	GCWGC	3 cut(s)	982, 1073, 1611
ApoI	RAATTY	4 cut(s)	385, 1046, 1181, 1524
AseI	ATTAAT	1 cut(s)	1082
AspLEI	GCGC	3 cut(s)	828, 856, 996
AspS9I	GGNCC	5 cut(s)	331, 439, 606, 1097, 1109
AsuC2I	CCSGG	1 cut(s)	538
AsuHPI	GGTGA	3 cut(s)	20, 1211, 1420
AsuII	TTCGAA	1 cut(s)	1302
AsuNHI	GCTAGC	1 cut(s)	1843
AvaI	CYCGRG	1 cut(s)	360
AvaII	GGWCC	2 cut(s)	606, 1097
AxyI	CCTNAGG	1 cut(s)	216
BanII	GRGCYC	1 cut(s)	213
BbrPI	CACGTG	1 cut(s)	566
BbsI	GAAGAC	3 cut(s)	1291, 1785, 1987
Bbv12I	GWGCWC	2 cut(s)	213, 1294
BbvI	GCAGC	3 cut(s)	969, 1085, 1598
BccI	CCATC	4 cut(s)	586, 969, 973, 1870
BceAI	ACGGC	1 cut(s)	1452
BciT130I	CCWGG	3 cut(s)	138, 417, 1432
BcnI	CCSGG	1 cut(s)	538
BcoDI	GTCTC	6 cut(s)	314, 629, 875, 944, 1344, 1636
BfaI	CTAG	4 cut(s)	1113, 1194, 1238, 1844
BfmI	CTRYAG	5 cut(s)	156, 192, 676, 1028, 1584
BfoI	RGCGCY	1 cut(s)	997
BglII	AGATCT	3 cut(s)	636, 810, 1972
BisI	GCNGC	3 cut(s)	983, 1074, 1612
BlpI	GCTNAGC	1 cut(s)	1848
BlsI	GCNGC	3 cut(s)	984, 1075, 1613
Bme1390I	CCNGG	4 cut(s)	138, 417, 538, 1432
Bme18I	GGWCC	2 cut(s)	606, 1097
BmeT110I	CYCGRG	1 cut(s)	360
BmgBI	CACGTC	1 cut(s)	1354
BmgT120I	GGNCC	5 cut(s)	331, 439, 606, 1097, 1109
BmiI	GGNNCC	1 cut(s)	1098
BmrFI	CCNGG	4 cut(s)	138, 417, 538, 1432
BmsI	GCATC	5 cut(s)	401, 483, 921, 1623, 1690
BmtI	GCTAGC	1 cut(s)	1847
BpiI	GAAGAC	3 cut(s)	1291, 1785, 1987
BpmI	CTGGAG	2 cut(s)	72, 438
Bpu10I	CCTNAGC	1 cut(s)	1293
Bpu1102I	GCTNAGC	1 cut(s)	1848
Bpu14I	TTCGAA	1 cut(s)	1302
BpuEI	CTTGAG	1 cut(s)	59
BpuMI	CCSGG	1 cut(s)	538
Bsa29I	ATCGAT	1 cut(s)	279
BsaAI	YACGTR	1 cut(s)	566
BsaBI	GATNNNNATC	1 cut(s)	874
BsaI	GGTCTC	1 cut(s)	629
BsaJI	CCNNGG	3 cut(s)	137, 334, 442
BsaXI	ACNNNNNCTCC	4 cut(s)	1407, 1437, 1488, 1518
Bsc4I	CCNNNNNNNGG	3 cut(s)	603, 1106, 1535
Bse1I	ACTGG	3 cut(s)	366, 687, 794
Bse21I	CCTNAGG	1 cut(s)	216
Bse3DI	GCAATG	1 cut(s)	117
Bse8I	GATNNNNATC	1 cut(s)	874
BseBI	CCWGG	3 cut(s)	138, 417, 1432
BseCI	ATCGAT	1 cut(s)	279
BseDI	CCNNGG	3 cut(s)	137, 334, 442
BseGI	GGATG	7 cut(s)	498, 931, 961, 1258, 1309, 1614, 1692
BseJI	GATNNNNATC	1 cut(s)	874
BseLI	CCNNNNNNNGG	3 cut(s)	603, 1106, 1535
BseMI	GCAATG	1 cut(s)	117
BseMII	CTCAG	5 cut(s)	84, 207, 1154, 1307, 1839
BseNI	ACTGG	3 cut(s)	366, 687, 794
BseXI	GCAGC	3 cut(s)	969, 1085, 1598
BseYI	CCCAGC	1 cut(s)	1213
BsgI	GTGCAG	1 cut(s)	707
Bsh1236I	CGCG	1 cut(s)	104
Bsh1285I	CGRYCG	1 cut(s)	283
BshFI	GGCC	5 cut(s)	332, 440, 596, 1111, 1439
BshVI	ATCGAT	1 cut(s)	279
BsiEI	CGRYCG	1 cut(s)	283
BsiHKAI	GWGCWC	2 cut(s)	213, 1294
BsiHKCI	CYCGRG	1 cut(s)	360
BsiSI	CCGG	2 cut(s)	537, 1284
BslFI	GGGAC	3 cut(s)	553, 1110, 1552
BslI	CCNNNNNNNGG	3 cut(s)	603, 1106, 1535
BsmAI	GTCTC	6 cut(s)	314, 629, 875, 944, 1344, 1636
BsmBI	CGTCTC	1 cut(s)	1344
BsmFI	GGGAC	3 cut(s)	553, 1110, 1552
BsnI	GGCC	5 cut(s)	332, 440, 596, 1111, 1439
Bso31I	GGTCTC	1 cut(s)	629
BsoBI	CYCGRG	1 cut(s)	360
Bsp119I	TTCGAA	1 cut(s)	1302
Bsp1286I	GDGCHC	2 cut(s)	213, 1294
Bsp143I	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
Bsp1720I	GCTNAGC	1 cut(s)	1848
BspACI	CCGC	3 cut(s)	5, 104, 1171
BspANI	GGCC	5 cut(s)	332, 440, 596, 1111, 1439
BspCNI	CTCAG	5 cut(s)	85, 208, 1153, 1306, 1840
BspDI	ATCGAT	1 cut(s)	279
BspFNI	CGCG	1 cut(s)	104
BspLI	GGNNCC	1 cut(s)	1098
BspMAI	CTGCAG	4 cut(s)	196, 680, 1032, 1588
BspOI	GCTAGC	1 cut(s)	1847
BspPI	GGATC	2 cut(s)	1373, 1943
BspQI	GCTCTTC	1 cut(s)	647
BspT104I	TTCGAA	1 cut(s)	1302
BspTNI	GGTCTC	1 cut(s)	629
BsrDI	GCAATG	1 cut(s)	117
BsrI	ACTGG	3 cut(s)	366, 687, 794
BssECI	CCNNGG	3 cut(s)	137, 334, 442
BssMI	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
Bst2UI	CCWGG	3 cut(s)	138, 417, 1432
Bst4CI	ACNGT	2 cut(s)	160, 1391
Bst6I	CTCTTC	3 cut(s)	231, 647, 1342
BstAPI	GCANNNNNTGC	1 cut(s)	823
BstBAI	YACGTR	1 cut(s)	566
BstBI	TTCGAA	1 cut(s)	1302
BstC8I	GCNNGC	3 cut(s)	71, 1650, 1845
BstDEI	CTNAG	9 cut(s)	51, 93, 216, 252, 1140, 1208, 1293, 1848, 1945
BstDSI	CCRYGG	2 cut(s)	334, 442
BstF5I	GGATG	7 cut(s)	498, 931, 961, 1258, 1309, 1614, 1692
BstFNI	CGCG	1 cut(s)	104
BstH2I	RGCGCY	1 cut(s)	997
BstHHI	GCGC	3 cut(s)	828, 856, 996
BstKTI	GATC	8 cut(s)	283, 639, 806, 813, 1368, 1473, 1951, 1975
BstMAI	GTCTC	6 cut(s)	314, 629, 875, 944, 1344, 1636
BstMBI	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
BstMCI	CGRYCG	1 cut(s)	283
BstMWI	GCNNNNNNNGC	8 cut(s)	66, 356, 593, 823, 991, 1683, 1709, 1849
BstNI	CCWGG	3 cut(s)	138, 417, 1432
BstNSI	RCATGY	2 cut(s)	474, 1856
BstSCI	CCNGG	4 cut(s)	136, 415, 536, 1430
BstSFI	CTRYAG	5 cut(s)	156, 192, 676, 1028, 1584
BstUI	CGCG	1 cut(s)	104
BstV1I	GCAGC	3 cut(s)	969, 1085, 1598
BstV2I	GAAGAC	3 cut(s)	1291, 1785, 1987
BstX2I	RGATCY	4 cut(s)	636, 810, 1948, 1972
BstYI	RGATCY	4 cut(s)	636, 810, 1948, 1972
Bsu15I	ATCGAT	1 cut(s)	279
Bsu36I	CCTNAGG	1 cut(s)	216
BsuRI	GGCC	5 cut(s)	332, 440, 596, 1111, 1439
BsuTUI	ATCGAT	1 cut(s)	279
BtgI	CCRYGG	2 cut(s)	334, 442
BtrI	CACGTC	1 cut(s)	1354
BtsCI	GGATG	7 cut(s)	498, 931, 961, 1258, 1309, 1614, 1692
BtsI	GCAGTG	2 cut(s)	1294, 1719
BtsIMutI	CAGTG	4 cut(s)	373, 1294, 1576, 1719
Cac8I	GCNNGC	3 cut(s)	71, 1650, 1845
CaiI	CAGNNNCTG	1 cut(s)	862
CfoI	GCGC	3 cut(s)	828, 856, 996
Cfr13I	GGNCC	5 cut(s)	331, 439, 606, 1097, 1109
ClaI	ATCGAT	1 cut(s)	279
CseI	GACGC	1 cut(s)	1489
Csp6I	GTAC	5 cut(s)	618, 1151, 1518, 1552, 1717
CviAII	CATG	7 cut(s)	265, 471, 500, 755, 1117, 1853, 2005
CviQI	GTAC	5 cut(s)	618, 1151, 1518, 1552, 1717
DdeI	CTNAG	9 cut(s)	51, 93, 216, 252, 1140, 1208, 1293, 1848, 1945
DpnI	GATC	8 cut(s)	282, 638, 805, 812, 1367, 1472, 1950, 1974
DpnII	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
DraI	TTTAAA	1 cut(s)	435
DraIII	CACNNNGTG	1 cut(s)	1901
Eam1104I	CTCTTC	3 cut(s)	231, 647, 1342
EarI	CTCTTC	3 cut(s)	231, 647, 1342
EciI	GGCGGA	1 cut(s)	1160
Ecl136II	GAGCTC	1 cut(s)	211
Eco24I	GRGCYC	1 cut(s)	213
Eco31I	GGTCTC	1 cut(s)	629
Eco47I	GGWCC	2 cut(s)	606, 1097
Eco53kI	GAGCTC	1 cut(s)	211
Eco57I	CTGAAG	2 cut(s)	575, 1981
Eco72I	CACGTG	1 cut(s)	566
Eco81I	CCTNAGG	1 cut(s)	216
Eco88I	CYCGRG	1 cut(s)	360
EcoICRI	GAGCTC	1 cut(s)	211
EcoO109I	RGGNCCY	1 cut(s)	1097
EcoRII	CCWGG	3 cut(s)	136, 415, 1430
EcoT38I	GRGCYC	1 cut(s)	213
Esp3I	CGTCTC	1 cut(s)	1344
FaeI	CATG	7 cut(s)	268, 474, 503, 758, 1120, 1856, 2008
FalI	AAGNNNNNCTT	2 cut(s)	581, 613
FaqI	GGGAC	3 cut(s)	553, 1110, 1552
FatI	CATG	7 cut(s)	264, 470, 499, 754, 1116, 1852, 2004
Fnu4HI	GCNGC	3 cut(s)	983, 1074, 1612
FokI	GGATG	7 cut(s)	505, 938, 948, 1245, 1296, 1601, 1679
FriOI	GRGCYC	1 cut(s)	213
Fsp4HI	GCNGC	3 cut(s)	983, 1074, 1612
FspBI	CTAG	4 cut(s)	1113, 1194, 1238, 1844
FspI	TGCGCA	1 cut(s)	855
GlaI	GCGC	3 cut(s)	827, 855, 995
GluI	GCNGC	3 cut(s)	983, 1074, 1612
GsaI	CCCAGC	1 cut(s)	1217
GsuI	CTGGAG	2 cut(s)	72, 438
HaeII	RGCGCY	1 cut(s)	997
HaeIII	GGCC	5 cut(s)	332, 440, 596, 1111, 1439
HapII	CCGG	2 cut(s)	537, 1284
HgaI	GACGC	1 cut(s)	1489
HhaI	GCGC	3 cut(s)	828, 856, 996
Hin1II	CATG	7 cut(s)	268, 474, 503, 758, 1120, 1856, 2008
Hin6I	GCGC	3 cut(s)	826, 854, 994
HinP1I	GCGC	3 cut(s)	826, 854, 994
HincII	GTYRAC	2 cut(s)	295, 976
HindII	GTYRAC	2 cut(s)	295, 976
HinfI	GANTC	3 cut(s)	188, 197, 1449
HpaII	CCGG	2 cut(s)	537, 1284
HphI	GGTGA	3 cut(s)	20, 1211, 1420
Hpy166II	GTNNAC	6 cut(s)	295, 912, 976, 1658, 1717, 1867
Hpy188I	TCNGA	2 cut(s)	208, 880
Hpy188III	TCNNGA	6 cut(s)	185, 284, 396, 949, 1262, 1639
Hpy8I	GTNNAC	6 cut(s)	295, 912, 976, 1658, 1717, 1867
Hpy99I	CGWCG	1 cut(s)	1190
HpyAV	CCTTC	6 cut(s)	25, 421, 727, 776, 1034, 1298
HpyCH4III	ACNGT	2 cut(s)	160, 1391
HpyCH4IV	ACGT	5 cut(s)	289, 565, 1277, 1353, 1765
HpyF10VI	GCNNNNNNNGC	8 cut(s)	66, 356, 593, 823, 991, 1683, 1709, 1849
HpyF3I	CTNAG	9 cut(s)	51, 93, 216, 252, 1140, 1208, 1293, 1848, 1945
HpySE526I	ACGT	5 cut(s)	289, 565, 1277, 1353, 1765
Hsp92II	CATG	7 cut(s)	268, 474, 503, 758, 1120, 1856, 2008
HspAI	GCGC	3 cut(s)	826, 854, 994
Kzo9I	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
LguI	GCTCTTC	1 cut(s)	647
LmnI	GCTCC	3 cut(s)	216, 1252, 1415
Lsp1109I	GCAGC	3 cut(s)	969, 1085, 1598
LweI	GCATC	5 cut(s)	401, 483, 921, 1623, 1690
MaeI	CTAG	4 cut(s)	1113, 1194, 1238, 1844
MaeII	ACGT	5 cut(s)	289, 565, 1277, 1353, 1765
MaeIII	GTNAC	7 cut(s)	226, 466, 667, 898, 1132, 1426, 1766
MalI	GATC	8 cut(s)	282, 638, 805, 812, 1367, 1472, 1950, 1974
MboI	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
MfeI	CAATTG	1 cut(s)	1453
MflI	RGATCY	4 cut(s)	636, 810, 1948, 1972
MhlI	GDGCHC	2 cut(s)	213, 1294
MluCI	AATT	7 cut(s)	385, 1046, 1083, 1181, 1453, 1524, 1599
MlyI	GAGTC	1 cut(s)	206
MmeI	TCCRAC	4 cut(s)	1642, 1963, 1986, 2009
MnlI	CCTC	6 cut(s)	211, 463, 720, 1407, 1714, 1768
MseI	TTAA	7 cut(s)	434, 599, 906, 1059, 1082, 1248, 1442
MslI	CAYNNNNRTG	1 cut(s)	1787
MspA1I	CMGCKG	2 cut(s)	92, 304
MspI	CCGG	2 cut(s)	537, 1284
MspR9I	CCNGG	4 cut(s)	138, 417, 538, 1432
MunI	CAATTG	1 cut(s)	1453
MvaI	CCWGG	3 cut(s)	138, 417, 1432
MvnI	CGCG	1 cut(s)	104
MwoI	GCNNNNNNNGC	8 cut(s)	66, 356, 593, 823, 991, 1683, 1709, 1849
NciI	CCSGG	1 cut(s)	538
NdeII	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
NheI	GCTAGC	1 cut(s)	1843
NlaIII	CATG	7 cut(s)	268, 474, 503, 758, 1120, 1856, 2008
NlaIV	GGNNCC	1 cut(s)	1098
NmuCI	GTSAC	4 cut(s)	466, 898, 1132, 1426
NsbI	TGCGCA	1 cut(s)	855
NspI	RCATGY	2 cut(s)	474, 1856
NspV	TTCGAA	1 cut(s)	1302
PaeR7I	CTCGAG	1 cut(s)	360
PciI	ACATGT	1 cut(s)	470
PciSI	GCTCTTC	1 cut(s)	647
PfeI	GAWTC	2 cut(s)	188, 1449
PfoI	TCCNGGA	1 cut(s)	536
PkrI	GCNGC	3 cut(s)	984, 1075, 1613
Ple19I	CGATCG	1 cut(s)	283
PleI	GAGTC	1 cut(s)	205
PmaCI	CACGTG	1 cut(s)	566
PmlI	CACGTG	1 cut(s)	566
PpsI	GAGTC	1 cut(s)	205
Ppu21I	YACGTR	1 cut(s)	566
PpuMI	RGGWCCY	1 cut(s)	1097
PscI	ACATGT	1 cut(s)	470
PshBI	ATTAAT	1 cut(s)	1082
PsiI	TTATAA	1 cut(s)	1467
Psp124BI	GAGCTC	1 cut(s)	213
Psp1406I	AACGTT	1 cut(s)	1765
Psp5II	RGGWCCY	1 cut(s)	1097
Psp6I	CCWGG	3 cut(s)	136, 415, 1430
PspCI	CACGTG	1 cut(s)	566
PspFI	CCCAGC	1 cut(s)	1213
PspGI	CCWGG	3 cut(s)	136, 415, 1430
PspN4I	GGNNCC	1 cut(s)	1098
PspPI	GGNCC	5 cut(s)	331, 439, 606, 1097, 1109
PspPPI	RGGWCCY	1 cut(s)	1097
PspXI	VCTCGAGB	1 cut(s)	360
PstI	CTGCAG	4 cut(s)	196, 680, 1032, 1588
PstNI	CAGNNNCTG	1 cut(s)	862
PsuI	RGATCY	4 cut(s)	636, 810, 1948, 1972
PvuI	CGATCG	1 cut(s)	283
PvuII	CAGCTG	2 cut(s)	92, 304
RsaI	GTAC	5 cut(s)	619, 1152, 1519, 1553, 1718
RsaNI	GTAC	5 cut(s)	618, 1151, 1518, 1552, 1717
RseI	CAYNNNNRTG	1 cut(s)	1787
SacI	GAGCTC	1 cut(s)	213
SapI	GCTCTTC	1 cut(s)	647
SaqAI	TTAA	7 cut(s)	434, 599, 906, 1059, 1082, 1248, 1442
SatI	GCNGC	3 cut(s)	983, 1074, 1612
Sau3AI	GATC	8 cut(s)	280, 636, 803, 810, 1365, 1470, 1948, 1972
Sau96I	GGNCC	5 cut(s)	331, 439, 606, 1097, 1109
SchI	GAGTC	1 cut(s)	206
ScrFI	CCNGG	4 cut(s)	138, 417, 538, 1432
SduI	GDGCHC	2 cut(s)	213, 1294
SfaNI	GCATC	5 cut(s)	401, 483, 921, 1623, 1690
SfcI	CTRYAG	5 cut(s)	156, 192, 676, 1028, 1584
Sfr274I	CTCGAG	1 cut(s)	360
SfuI	TTCGAA	1 cut(s)	1302
SinI	GGWCC	2 cut(s)	606, 1097
SlaI	CTCGAG	1 cut(s)	360
SmiMI	CAYNNNNRTG	1 cut(s)	1787
SmlI	CTYRAG	2 cut(s)	74, 360
SmoI	CTYRAG	2 cut(s)	74, 360
Sse9I	AATT	7 cut(s)	385, 1046, 1083, 1181, 1453, 1524, 1599
SsiI	CCGC	3 cut(s)	5, 104, 1171
SspI	AATATT	1 cut(s)	1057
SspMI	CTAG	4 cut(s)	1113, 1194, 1238, 1844
SstI	GAGCTC	1 cut(s)	213
StyD4I	CCNGG	4 cut(s)	136, 415, 536, 1430
TaaI	ACNGT	2 cut(s)	160, 1391
TaiI	ACGT	5 cut(s)	292, 568, 1280, 1356, 1768
TasI	AATT	7 cut(s)	385, 1046, 1083, 1181, 1453, 1524, 1599
TatI	WGTACW	3 cut(s)	617, 1517, 1551
TfiI	GAWTC	2 cut(s)	188, 1449
Tru1I	TTAA	7 cut(s)	434, 599, 906, 1059, 1082, 1248, 1442
Tru9I	TTAA	7 cut(s)	434, 599, 906, 1059, 1082, 1248, 1442
TscAI	CASTG	4 cut(s)	373, 1294, 1576, 1719
TseFI	GTSAC	4 cut(s)	466, 898, 1132, 1426
TseI	GCWGC	3 cut(s)	982, 1073, 1611
Tsp45I	GTSAC	4 cut(s)	466, 898, 1132, 1426
TspDTI	ATGAA	6 cut(s)	665, 707, 1059, 1306, 1957, 1967
TspGWI	ACGGA	3 cut(s)	938, 1367, 1785
TspRI	CASTG	4 cut(s)	373, 1294, 1576, 1719
VpaK11BI	GGWCC	2 cut(s)	606, 1097
VspI	ATTAAT	1 cut(s)	1082
XapI	RAATTY	4 cut(s)	385, 1046, 1181, 1524
XceI	RCATGY	2 cut(s)	474, 1856
XhoI	CTCGAG	1 cut(s)	360
XspI	CTAG	4 cut(s)	1113, 1194, 1238, 1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.