Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0016056

Physical Location & Seq

Genomic Coordinates Forward (+)

36287834 .. 36293071

Gene Structure 5238 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g43550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGAGAGCAGTAAGAAACCCAAATCAAAGGCATCGGCAAAGAAGCCCAAAGATAGTGTTCTCGAGCAGAAATCTCCAGCTGAGTTTTTCGCTGAGAACAAGAACATTGCTGGGTTTGATAATCCAGGGAAATGTCTTTATACTACTGTGAGGGAACTTGTGGAGAACTCACTTGATTCGACGGAGTCGATATCGGAGCTTCCTTTGATAGAAATCACAATTGAAGATATTAAGAAAAGCAAGTTCAATTCTATGATTGGTCTTGTTGATCGAGATCGTGTTGATCAAGAATTGTATGATGATCATGAGACAGAGAAGGCTCGTGAGAAACGATTAGCAAAAGAAGCTCAAGCCCAGGAATTACAAGCAAAGAATGCTTCCCTCGGAAAGAAAACTAAAGAGCCTGCAGCTCCAAAGACCATGAAGGGTCGAGGTGGGGCTGCATTTTACCGGGTTACTTGCAAGGATAATGGAAGAGGAATGCCACATGATGACATTCCAAACATGTTTGGACGAGTACTGTCTGGGACAAAATATGGCTTGAAGCAGACACGCGGAAAGTTCGGTCTAGGTGCAAAGATGGCATTAATTTGGTCAAAGATGAGTACAGGGCTTCCTATAGATATCTCTTCATCAATGAAGGGCCAAAATTATAATTCTTTCTGCAGGCTGGATATAGATATTCATCGGAACATACCTCATGTTCATATACATGAAAAACGGGATAGCAAGGATAGGTGGCACGGTGCTGAAATCCAAGTTGTTATTGAGGGAAATTGGACAACTTACCGTTCCAAGATATTGCATTACATGCGACAAATGGCTGTTATCACTCCTTATGCTGAGTTCATTTTTAAATTTGTATCAGATGTTCCCGATAAAAACGTTACCATAAGGTTTGCACGGAGAACTGATGTGATGCCTCCTGTTCCTCTTGAGACAAAGCACCATCCCTCATCTGTTGACTTGTTGCTAATCAAACGCCTCATTGAAGAAACTTCAAAGCAGAACCTTTTACAGTTTCTTCAGCATGAATTCGTTAATATAGGAAAGTCCTATGCTGAACGACTAATTGGGGAATTGGGTCCTGAGTTCAGTCCGAAGATGCCTGTGAAATCTCTAACTTCTCAGCAAATTGTACGCATCCATCAGTTATTTCGGCAAGCCAAGTTTAATGATCCAAGTGGTGATTGCCTGAGTCCTGCAGGGGAATACAATCTCCGTCTAGGGATTATAAAGGAGCTGCATCCAGAGTTGGTTGCTACTTATTCTGGAAGCGCTCAAGTTTTTGAAGGTCACCCTTTCATTGTGGAAGCTGGGGTCAGCGTTGGTGGAAAAGATGTCAAACAAGGTTTAAATATTTTCCGGTTTGCAAACCGGATTCCACTCCTTTTTGAGCAAGGTGCTGATGTGGTCACAAGGACTGCCCTTAAGAGAATCAATTGGAGTAGTTACAAGATCAACCAGACTCAGGATAAAGTTGGTGTTTTTGTGAGCGTTGTAAGCACAAAGATTCCCTTTAAAGGAACTGGGAAGGAGTATATTGGAGATGATATAACTGAAATAGCTTCTGCTGTCAAGTCTGCCATTCAGCACTGTTGCATTCAGCTGAAAACCAAGATAGTGAAGAACATACAAGCTCGTGAACAAAAAGAGAGAAAACGGAATTTGAGCAAGTATGCTGAAAATGTTGCTGGTGCTGTATGTGGTGTACTGAAGCAAATGCAACAAATACAAGCATCAAAGAAGAGACGTTATGATGATAAGGAAGCAGAAGTACTTAAGAAACTGTCAACTGGGATGATCACAAAAGAAATGGTCAAGGAAAAGCTTGTACAACATGTTGAACAGGTGGACTCGGAGATGGCAATGGAATTTGCTGCAAACAGTGGAGTGAGTGAGGAACCCAGAGAATGTATATATCTACAATCATTAGAAGCTGCTGAAGATAACTTTATCGACTTGCATAGTCCCCTATTTGTCTTTCGGCTGTTTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003735 GO:0003824 GO:0003916 GO:0003918 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007389 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009330 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010467 GO:0014070 GO:0015935 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0017111 GO:0019538 GO:0022402 GO:0022613 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0033993 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042254 GO:0042623 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044446 GO:0044464 GO:0044786 GO:0046483 GO:0046983 GO:0048856 GO:0048869 GO:0050896 GO:0061505 GO:0071704 GO:0071840 GO:0090304 GO:0090558 GO:0140097 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HATPase_c_3 Topo-VIb_trans

Protein Analysis

667

Amino Acids

75.16

Weight (kDa)

9.17

Isoelectric Point (pI)

45.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Topo-VIb_trans	PF09239	394 - 553	9.4e-56	Topoisomerase VI B subunit, transducer

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20780
fragaria_vesca	FvH4_3g43550
malus_domestica	MD03G1021100.v1.1
prunus_persica	Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1
pyrus_communis	pycom03g01820
rosa_chinensis	RchiOBHm_Chr5g0078101
rosa_laevigata	RLG00000036751
rosa_multiflora	Rmu_sc0008741.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000360 Rroxscaffold_1G00004120
rosa_rugosa	Rorug05G0458500
rosa_samantha	Rh5AG513100
rosa_wichuraiana	Rw5G047590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	654, 1235
AccII	CGCG	1 cut(s)	555
AciI	CCGC	1 cut(s)	555
AclI	AACGTT	1 cut(s)	885
AclWI	GGATC	1 cut(s)	1172
AcsI	RAATTY	4 cut(s)	857, 1034, 1666, 1874
AcuI	CTGAAG	3 cut(s)	1010, 1736, 1965
AfaI	GTAC	6 cut(s)	519, 607, 1140, 1713, 1779, 1836
AfeI	AGCGCT	1 cut(s)	1279
AfiI	CCNNNNNNNGG	2 cut(s)	1471, 1523
AflII	CTTAAG	2 cut(s)	1430, 1781
AflIII	ACRYGT	2 cut(s)	504, 1840
AgsI	TTSAA	7 cut(s)	224, 247, 544, 992, 1002, 1292, 1847
AjnI	CCWGG	2 cut(s)	124, 354
AjuI	GAANNNNNNNTTGG	2 cut(s)	1056, 1088
Alw26I	GTCTC	3 cut(s)	302, 932, 1744
AlwI	GGATC	1 cut(s)	1172
Ama87I	CYCGRG	1 cut(s)	62
Aor51HI	AGCGCT	1 cut(s)	1279
AoxI	GGCC	1 cut(s)	643
ApeKI	GCWGC	5 cut(s)	407, 440, 1243, 1880, 1940
ApoI	RAATTY	4 cut(s)	857, 1034, 1666, 1874
AseI	ATTAAT	1 cut(s)	587
AspLEI	GCGC	1 cut(s)	1280
AspS9I	GGNCC	2 cut(s)	643, 1085
AsuC2I	CCSGG	1 cut(s)	452
AsuHPI	GGTGA	2 cut(s)	1199, 1289
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	1 cut(s)	1085
BarI	GAAGNNNNNNTAC	2 cut(s)	1761, 1793
BauI	CACGAG	2 cut(s)	321, 1641
BbvI	GCAGC	5 cut(s)	419, 427, 1230, 1867, 1927
BccI	CCATC	4 cut(s)	574, 957, 1155, 1858
BciT130I	CCWGG	2 cut(s)	126, 356
BclI	TGATCA	3 cut(s)	283, 301, 1803
BcnI	CCSGG	1 cut(s)	452
BcoDI	GTCTC	3 cut(s)	302, 932, 1744
BfaI	CTAG	3 cut(s)	569, 1226, 1999
BfmI	CTRYAG	4 cut(s)	405, 618, 664, 1203
BfoI	RGCGCY	1 cut(s)	1281
BfrI	CTTAAG	2 cut(s)	1430, 1781
BisI	GCNGC	5 cut(s)	408, 441, 1244, 1881, 1941
BlsI	GCNGC	5 cut(s)	409, 442, 1245, 1882, 1942
BmcAI	AGTACT	2 cut(s)	519, 1779
Bme1390I	CCNGG	3 cut(s)	126, 356, 452
Bme18I	GGWCC	1 cut(s)	1085
BmeT110I	CYCGRG	1 cut(s)	62
BmgT120I	GGNCC	2 cut(s)	643, 1085
BmiI	GGNNCC	2 cut(s)	1086, 1905
BmrFI	CCNGG	3 cut(s)	126, 356, 452
BmrI	ACTGGG	2 cut(s)	1539, 1806
BmsI	GCATC	6 cut(s)	41, 909, 1095, 1152, 1255, 1748
BmuI	ACTGGG	2 cut(s)	1539, 1806
BpmI	CTGGAG	1 cut(s)	60
BpuEI	CTTGAG	3 cut(s)	333, 956, 1266
BpuMI	CCSGG	1 cut(s)	452
BsaBI	GATNNNNATC	3 cut(s)	212, 273, 684
BsaJI	CCNNGG	3 cut(s)	125, 354, 382
BsaWI	WCCGGW	2 cut(s)	1365, 1377
Bsc4I	CCNNNNNNNGG	2 cut(s)	1471, 1523
Bse1I	ACTGG	2 cut(s)	1534, 1801
Bse3DI	GCAATG	2 cut(s)	105, 1875
Bse8I	GATNNNNATC	3 cut(s)	212, 273, 684
BseBI	CCWGG	2 cut(s)	126, 356
BseDI	CCNNGG	3 cut(s)	125, 354, 382
BseGI	GGATG	4 cut(s)	949, 1143, 1246, 1806
BseJI	GATNNNNATC	3 cut(s)	212, 273, 684
BseLI	CCNNNNNNNGG	2 cut(s)	1471, 1523
BseMI	GCAATG	2 cut(s)	105, 1875
BseMII	CTCAG	7 cut(s)	72, 84, 834, 1080, 1142, 1187, 1484
BseNI	ACTGG	2 cut(s)	1534, 1801
BseXI	GCAGC	5 cut(s)	419, 427, 1230, 1867, 1927
BseYI	CCCAGC	2 cut(s)	110, 1316
Bsh1236I	CGCG	1 cut(s)	555
BshFI	GGCC	1 cut(s)	645
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	3 cut(s)	451, 1366, 1378
BslFI	GGGAC	2 cut(s)	541, 1956
BslI	CCNNNNNNNGG	2 cut(s)	1471, 1523
BsmAI	GTCTC	3 cut(s)	302, 932, 1744
BsmBI	CGTCTC	1 cut(s)	1744
BsmFI	GGGAC	2 cut(s)	541, 1956
BsmI	GAATGC	3 cut(s)	379, 486, 1602
BsnI	GGCC	1 cut(s)	645
BsoBI	CYCGRG	1 cut(s)	62
Bsp1407I	TGTACA	1 cut(s)	1834
Bsp143I	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
BspACI	CCGC	1 cut(s)	555
BspANI	GGCC	1 cut(s)	645
BspCNI	CTCAG	7 cut(s)	73, 85, 835, 1081, 1141, 1188, 1483
BspFNI	CGCG	1 cut(s)	555
BspHI	TCATGA	1 cut(s)	304
BspLI	GGNNCC	2 cut(s)	1086, 1905
BspMAI	CTGCAG	3 cut(s)	409, 668, 1207
BspPI	GGATC	1 cut(s)	1172
BspTI	CTTAAG	2 cut(s)	1430, 1781
BsrDI	GCAATG	2 cut(s)	105, 1875
BsrGI	TGTACA	1 cut(s)	1834
BsrI	ACTGG	2 cut(s)	1534, 1801
BssECI	CCNNGG	3 cut(s)	125, 354, 382
BssMI	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
BssSI	CACGAG	2 cut(s)	321, 1641
Bst2BI	CACGAG	2 cut(s)	321, 1641
Bst2UI	CCWGG	2 cut(s)	126, 356
Bst4CI	ACNGT	8 cut(s)	148, 522, 746, 791, 1020, 1598, 1791, 1889
Bst6I	CTCTTC	3 cut(s)	469, 634, 1742
BstAFI	CTTAAG	2 cut(s)	1430, 1781
BstAPI	GCANNNNNTGC	2 cut(s)	374, 811
BstAUI	TGTACA	1 cut(s)	1834
BstC8I	GCNNGC	3 cut(s)	405, 668, 1164
BstDEI	CTNAG	7 cut(s)	81, 93, 843, 1089, 1128, 1196, 1470
BstEII	GGTNACC	1 cut(s)	1295
BstF5I	GGATG	4 cut(s)	949, 1143, 1246, 1806
BstFNI	CGCG	1 cut(s)	555
BstH2I	RGCGCY	1 cut(s)	1281
BstHHI	GCGC	1 cut(s)	1280
BstKTI	GATC	7 cut(s)	271, 277, 286, 304, 1180, 1461, 1806
BstMAI	GTCTC	3 cut(s)	302, 932, 1744
BstMBI	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
BstMWI	GCNNNNNNNGC	5 cut(s)	344, 374, 581, 811, 1503
BstNI	CCWGG	2 cut(s)	126, 356
BstNSI	RCATGY	3 cut(s)	508, 814, 1844
BstPI	GGTNACC	1 cut(s)	1295
BstSCI	CCNGG	3 cut(s)	124, 354, 450
BstSFI	CTRYAG	4 cut(s)	405, 618, 664, 1203
BstUI	CGCG	1 cut(s)	555
BstV1I	GCAGC	5 cut(s)	419, 427, 1230, 1867, 1927
BsuRI	GGCC	1 cut(s)	645
BtsCI	GGATG	4 cut(s)	949, 1143, 1246, 1806
BtsIMutI	CAGTG	2 cut(s)	1594, 1894
Cac8I	GCNNGC	3 cut(s)	405, 668, 1164
CciI	TCATGA	1 cut(s)	304
CfoI	GCGC	1 cut(s)	1280
Cfr13I	GGNCC	2 cut(s)	643, 1085
Csp6I	GTAC	6 cut(s)	518, 606, 1139, 1712, 1778, 1835
CviAII	CATG	9 cut(s)	305, 421, 488, 505, 701, 713, 811, 1031, 1841
CviQI	GTAC	6 cut(s)	518, 606, 1139, 1712, 1778, 1835
DdeI	CTNAG	7 cut(s)	81, 93, 843, 1089, 1128, 1196, 1470
DpnI	GATC	7 cut(s)	270, 276, 285, 303, 1179, 1460, 1805
DpnII	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
DraI	TTTAAA	3 cut(s)	856, 1356, 1522
Eam1104I	CTCTTC	3 cut(s)	469, 634, 1742
EarI	CTCTTC	3 cut(s)	469, 634, 1742
Eco32I	GATATC	2 cut(s)	192, 625
Eco47I	GGWCC	1 cut(s)	1085
Eco47III	AGCGCT	1 cut(s)	1279
Eco57I	CTGAAG	3 cut(s)	1010, 1736, 1965
Eco88I	CYCGRG	1 cut(s)	62
Eco91I	GGTNACC	1 cut(s)	1295
EcoO109I	RGGNCCY	1 cut(s)	1085
EcoO65I	GGTNACC	1 cut(s)	1295
EcoRI	GAATTC	1 cut(s)	1034
EcoRII	CCWGG	2 cut(s)	124, 354
EcoRV	GATATC	2 cut(s)	192, 625
Esp3I	CGTCTC	1 cut(s)	1744
FaeI	CATG	9 cut(s)	308, 424, 491, 508, 704, 716, 814, 1034, 1844
FalI	AAGNNNNNCTT	2 cut(s)	1502, 1534
FaqI	GGGAC	2 cut(s)	541, 1956
FatI	CATG	9 cut(s)	304, 420, 487, 504, 700, 712, 810, 1030, 1840
FbaI	TGATCA	3 cut(s)	283, 301, 1803
Fnu4HI	GCNGC	5 cut(s)	408, 441, 1244, 1881, 1941
FokI	GGATG	4 cut(s)	936, 1130, 1233, 1813
Fsp4HI	GCNGC	5 cut(s)	408, 441, 1244, 1881, 1941
FspBI	CTAG	3 cut(s)	569, 1226, 1999
GlaI	GCGC	1 cut(s)	1279
GluI	GCNGC	5 cut(s)	408, 441, 1244, 1881, 1941
GsaI	CCCAGC	2 cut(s)	114, 1320
GsuI	CTGGAG	1 cut(s)	60
HaeII	RGCGCY	1 cut(s)	1281
HaeIII	GGCC	1 cut(s)	645
HapII	CCGG	3 cut(s)	451, 1366, 1378
HhaI	GCGC	1 cut(s)	1280
Hin1II	CATG	9 cut(s)	308, 424, 491, 508, 704, 716, 814, 1034, 1844
Hin6I	GCGC	1 cut(s)	1278
HinP1I	GCGC	1 cut(s)	1278
HincII	GTYRAC	2 cut(s)	964, 1794
HindII	GTYRAC	2 cut(s)	964, 1794
HindIII	AAGCTT	1 cut(s)	1829
HinfI	GANTC	8 cut(s)	176, 185, 1198, 1381, 1437, 1468, 1513, 1856
HpaII	CCGG	3 cut(s)	451, 1366, 1378
HphI	GGTGA	2 cut(s)	1199, 1289
Hpy166II	GTNNAC	5 cut(s)	964, 1646, 1712, 1794, 1855
Hpy188I	TCNGA	6 cut(s)	196, 386, 690, 868, 1101, 1861
Hpy8I	GTNNAC	5 cut(s)	964, 1646, 1712, 1794, 1855
Hpy99I	CGWCG	1 cut(s)	184
HpyAV	CCTTC	5 cut(s)	310, 418, 634, 1286, 1528
HpyCH4III	ACNGT	8 cut(s)	148, 522, 746, 791, 1020, 1598, 1791, 1889
HpyCH4IV	ACGT	2 cut(s)	885, 1753
HpyF10VI	GCNNNNNNNGC	5 cut(s)	344, 374, 581, 811, 1503
HpyF3I	CTNAG	7 cut(s)	81, 93, 843, 1089, 1128, 1196, 1470
HpySE526I	ACGT	2 cut(s)	885, 1753
Hsp92II	CATG	9 cut(s)	308, 424, 491, 508, 704, 716, 814, 1034, 1844
HspAI	GCGC	1 cut(s)	1278
Ksp22I	TGATCA	3 cut(s)	283, 301, 1803
Kzo9I	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
LmnI	GCTCC	3 cut(s)	196, 415, 1240
Lsp1109I	GCAGC	5 cut(s)	419, 427, 1230, 1867, 1927
LweI	GCATC	6 cut(s)	41, 909, 1095, 1152, 1255, 1748
MaeI	CTAG	3 cut(s)	569, 1226, 1999
MaeII	ACGT	2 cut(s)	885, 1753
MaeIII	GTNAC	5 cut(s)	454, 886, 1295, 1414, 1451
MalI	GATC	7 cut(s)	270, 276, 285, 303, 1179, 1460, 1805
MboI	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
MboII	GAAGA	9 cut(s)	236, 486, 621, 1004, 1016, 1114, 1639, 1759, 1958
MfeI	CAATTG	2 cut(s)	219, 1441
MlyI	GAGTC	4 cut(s)	194, 1207, 1462, 1850
MseI	TTAA	9 cut(s)	231, 587, 855, 1041, 1173, 1355, 1431, 1521, 1782
MslI	CAYNNNNRTG	1 cut(s)	711
MspA1I	CMGCKG	2 cut(s)	80, 1609
MspCI	CTTAAG	2 cut(s)	1430, 1781
MspI	CCGG	3 cut(s)	451, 1366, 1378
MspR9I	CCNGG	3 cut(s)	126, 356, 452
MunI	CAATTG	2 cut(s)	219, 1441
Mva1269I	GAATGC	3 cut(s)	379, 486, 1602
MvaI	CCWGG	2 cut(s)	126, 356
MvnI	CGCG	1 cut(s)	555
MwoI	GCNNNNNNNGC	5 cut(s)	344, 374, 581, 811, 1503
NciI	CCSGG	1 cut(s)	452
NdeII	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
NlaIII	CATG	9 cut(s)	308, 424, 491, 508, 704, 716, 814, 1034, 1844
NlaIV	GGNNCC	2 cut(s)	1086, 1905
NmuCI	GTSAC	2 cut(s)	1295, 1414
NspI	RCATGY	3 cut(s)	508, 814, 1844
PaeR7I	CTCGAG	1 cut(s)	62
PagI	TCATGA	1 cut(s)	304
PciI	ACATGT	2 cut(s)	504, 1840
PcsI	WCGNNNNNNNCGW	2 cut(s)	185, 328
PctI	GAATGC	3 cut(s)	379, 486, 1602
PfeI	GAWTC	4 cut(s)	176, 1381, 1437, 1513
PflFI	GACNNNGTC	1 cut(s)	184
PkrI	GCNGC	5 cut(s)	409, 442, 1245, 1882, 1942
PleI	GAGTC	4 cut(s)	193, 1206, 1462, 1850
PpsI	GAGTC	4 cut(s)	193, 1206, 1462, 1850
PpuMI	RGGWCCY	1 cut(s)	1085
PscI	ACATGT	2 cut(s)	504, 1840
PshBI	ATTAAT	1 cut(s)	587
PsiI	TTATAA	2 cut(s)	654, 1235
Psp1406I	AACGTT	1 cut(s)	885
Psp5II	RGGWCCY	1 cut(s)	1085
Psp6I	CCWGG	2 cut(s)	124, 354
PspEI	GGTNACC	1 cut(s)	1295
PspFI	CCCAGC	2 cut(s)	110, 1316
PspGI	CCWGG	2 cut(s)	124, 354
PspN4I	GGNNCC	2 cut(s)	1086, 1905
PspPI	GGNCC	2 cut(s)	643, 1085
PspPPI	RGGWCCY	1 cut(s)	1085
PsrI	GAACNNNNNNTAC	2 cut(s)	855, 887
PstI	CTGCAG	3 cut(s)	409, 668, 1207
PsyI	GACNNNGTC	1 cut(s)	184
PvuII	CAGCTG	2 cut(s)	80, 1609
RsaI	GTAC	6 cut(s)	519, 607, 1140, 1713, 1779, 1836
RsaNI	GTAC	6 cut(s)	518, 606, 1139, 1712, 1778, 1835
RseI	CAYNNNNRTG	1 cut(s)	711
SaqAI	TTAA	9 cut(s)	231, 587, 855, 1041, 1173, 1355, 1431, 1521, 1782
SatI	GCNGC	5 cut(s)	408, 441, 1244, 1881, 1941
Sau3AI	GATC	7 cut(s)	268, 274, 283, 301, 1177, 1458, 1803
Sau96I	GGNCC	2 cut(s)	643, 1085
SbfI	CCTGCAGG	1 cut(s)	1207
ScaI	AGTACT	2 cut(s)	519, 1779
SchI	GAGTC	4 cut(s)	194, 1207, 1462, 1850
ScrFI	CCNGG	3 cut(s)	126, 356, 452
SdaI	CCTGCAGG	1 cut(s)	1207
SfaNI	GCATC	6 cut(s)	41, 909, 1095, 1152, 1255, 1748
SfcI	CTRYAG	4 cut(s)	405, 618, 664, 1203
Sfr274I	CTCGAG	1 cut(s)	62
SinI	GGWCC	1 cut(s)	1085
SlaI	CTCGAG	1 cut(s)	62
SmiMI	CAYNNNNRTG	1 cut(s)	711
SmlI	CTYRAG	6 cut(s)	62, 348, 935, 1281, 1430, 1781
SmoI	CTYRAG	6 cut(s)	62, 348, 935, 1281, 1430, 1781
Sse8387I	CCTGCAGG	1 cut(s)	1207
SsiI	CCGC	1 cut(s)	555
SspI	AATATT	1 cut(s)	1360
SspMI	CTAG	3 cut(s)	569, 1226, 1999
StyD4I	CCNGG	3 cut(s)	124, 354, 450
TaaI	ACNGT	8 cut(s)	148, 522, 746, 791, 1020, 1598, 1791, 1889
TaiI	ACGT	2 cut(s)	888, 1756
TaqI	TCGA	6 cut(s)	63, 179, 188, 271, 430, 1959
TaqII	GACCGA	1 cut(s)	554
TatI	WGTACW	5 cut(s)	517, 605, 1711, 1777, 1834
TfiI	GAWTC	4 cut(s)	176, 1381, 1437, 1513
Tru1I	TTAA	9 cut(s)	231, 587, 855, 1041, 1173, 1355, 1431, 1521, 1782
Tru9I	TTAA	9 cut(s)	231, 587, 855, 1041, 1173, 1355, 1431, 1521, 1782
TscAI	CASTG	2 cut(s)	1601, 1894
TseFI	GTSAC	2 cut(s)	1295, 1414
TseI	GCWGC	5 cut(s)	407, 440, 1243, 1880, 1940
Tsp45I	GTSAC	2 cut(s)	1295, 1414
TspDTI	ATGAA	9 cut(s)	437, 621, 653, 674, 695, 729, 838, 1047, 1294
TspGWI	ACGGA	4 cut(s)	197, 919, 1211, 1678
TspRI	CASTG	2 cut(s)	1601, 1894
Tth111I	GACNNNGTC	1 cut(s)	184
Vha464I	CTTAAG	2 cut(s)	1430, 1781
VpaK11BI	GGWCC	1 cut(s)	1085
VspI	ATTAAT	1 cut(s)	587
XapI	RAATTY	4 cut(s)	857, 1034, 1666, 1874
XceI	RCATGY	3 cut(s)	508, 814, 1844
XhoI	CTCGAG	1 cut(s)	62
XspI	CTAG	3 cut(s)	569, 1226, 1999
ZrmI	AGTACT	2 cut(s)	519, 1779

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.