Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0016056

Physical Location & Seq

Genomic Coordinates Forward (+)

623676 .. 629630

Gene Structure 5955 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00000360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGAGAGTAGTAAGAAACCCAAATCAAAGACTCCAGCAAAGAAGCCCAAAGACAGTGTTCTTGAGCAGAAATCTCCAGCTGAGTTCTTCGCTGAGAACAAGAACATTGCTGGATTTGATAATCCAGGGAAATGTCTTTATACTACTGTGAGGGAACTTGTGGAGAACTCACTCGATTCGACAGAGTCCATATCAGAGCTTCCTCTGATTGAAATCACAATTGAAGATATTGAGAAAAGCAAGTTCAATTCTATGATTGGTCTTGTTGATCGAGACCGTGTTGATGAGGAACTGTATGATGATCATGAAACGGCTAAGGCTCGTGAGAAACGATTAGCAAAGGAAGCTCAAGCCCAAGAATTACAAGCAAAGAATGCTTCCCTCGGAAAGAAAATCAAAGAGCCTGCAGCTCCAAAGACCATGAAGGTTCGAGGTGGGGCTGCATTTTACAGGGTTACTTGCAAGGATAATGGACGAGGAATGCCACATGATGACATTCCAAATATGTTTGGACGAGTACTGTCTGGGACAAAATATGGCTTGAAGCAGACACGTGGAAAGTTTGGTCTAGGTGCAAAGATGGCATTAATTTGGTCGAAGATGAGTACAGGGCTTCCTATAGATATCTCTTCATCAATGAAGGGCCAAAGTTATAATTCTTTCTGCAGACTGGATATAGATATTCATCGGAACGTTCCTCATGTTCATATACATGAAAAACGGGATAACAAGGATAGGTGGCATGGTGCTGAGATCCAAGTTGTTATTGAGGGAAATTGGACAACTTACCGTTCCAAAATATTGCATTACATGCGACAAATGGCTGTTATCACTCCTTATGCTGATAAAAATGTCACCATAAGGTTTGCACGAAGAACTGATGTAATGCCTCCTGTTCCTCTTGAGACAAAGCACCATCCCTCATCTGTTGACTTATTGCTAATCAAACGCCTCATTGAAGAAACTTCAAAGCAGAACCTTTTACAGTTTCTTCAGCATGAATTCGTTAATATAGGAAAATCCTACGCTGAACGACTAATTGGGGAATTGGGTCCTGAGTTCAGTCCGAAGATGCCTGTGAAATCTCTAACTTCTCAGCAAATTGTACGCATCCATCAGTTATTTCGTCAAGCCAAGTTTAGTGATCCTAGTGGTGATTGCCTGAGTCCTGCAGGGGAATACAATCTCCGTCTAGGAATTATAAAGGAGCTGCATCCGGAGTTGGTTGCTACTTATTCTGGAAGTGCTCAAGTTTTTGAAGGCCACCCATTCATTGTGGAAGCTGGTGTCAGTGTTGGTGGAAAAGATGTCAAACAAGGTTTGAATATTTTTCGATTTGCAAACCGGATTCCACTTCTTTTTGAGCAAGGTGCTGATGTTGTCACAAGGACCGCCCTTAAGAGAATCAATTGGAGTAGTTACAAGATCAACCAGACTCAGGACAAAGTTGGTGTTTTTGTGAGTATTGTAAGCACAAAGATTCCCTTTAAAGGAACTGGGAAGGAGTATATTGGAGATGATATAACTGAAATAGCTTCTGCTGTCAAGCTGAAAACCAAGATAGTGAAGAATATCCAAGCTCGTGAACAAAAAGAGAGAAAACGGAATTTGAGCAAGTATGCTGAAAATGTTGCTGGTGCTGTGTGTGGTGTACTGAAGCAAATGCAACAAATACAAGCATCAAAGAAGAGACGTTATGATGGCAAGGAAGCAGAAATACTTAAGAAATTGTCATCTGGGATGATTACAAAAGAAATGGTCAAGGAAAAGCTTGTACAACATGTTGAACAGGTGGACTCGGAGATGGCAATGGAGTTTGCGGCAAATAGTGGAGTGAGCGAGGAACCCAGAGAATGTATATATCTTCAATCATTAGAAGCTGCTGAAGACAACTTTATCGACTTGCATAGTCCGCTATTTGTCTTTCGACTGTTCTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003735 GO:0003824 GO:0003916 GO:0003918 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007389 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009330 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010467 GO:0014070 GO:0015935 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0017111 GO:0019538 GO:0022402 GO:0022613 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0033993 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042254 GO:0042623 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044446 GO:0044464 GO:0044786 GO:0046483 GO:0046983 GO:0048856 GO:0048869 GO:0050896 GO:0061505 GO:0071704 GO:0071840 GO:0090304 GO:0090558 GO:0140097 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HATPase_c_3 Topo-VIb_trans

Protein Analysis

646

Amino Acids

72.82

Weight (kDa)

9.23

Isoelectric Point (pI)

48.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Topo-VIb_trans	PF09239	383 - 533	3.1e-49	Topoisomerase VI B subunit, transducer

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20780
fragaria_vesca	FvH4_3g43550
malus_domestica	MD03G1021100.v1.1
prunus_persica	Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1
pyrus_communis	pycom03g01820
rosa_chinensis	RchiOBHm_Chr5g0078101
rosa_laevigata	RLG00000036751
rosa_multiflora	Rmu_sc0008741.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000360 Rroxscaffold_1G00004120
rosa_rugosa	Rorug05G0458500
rosa_samantha	Rh5AG513100
rosa_wichuraiana	Rw5G047590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	654, 1202
AccIII	TCCGGA	1 cut(s)	1216
AciI	CCGC	3 cut(s)	1392, 1820, 1913
AclI	AACGTT	1 cut(s)	693
AclWI	GGATC	2 cut(s)	748, 1139
AcsI	RAATTY	2 cut(s)	1001, 1606
AcuI	CTGAAG	3 cut(s)	977, 1676, 1905
AcvI	CACGTG	1 cut(s)	554
AfaI	GTAC	5 cut(s)	519, 607, 1107, 1653, 1776
AfiI	CCNNNNNNNGG	2 cut(s)	1438, 1490
AflII	CTTAAG	2 cut(s)	1397, 1721
AflIII	ACRYGT	2 cut(s)	551, 1780
AjnI	CCWGG	1 cut(s)	124
AjuI	GAANNNNNNNTTGG	2 cut(s)	1023, 1055
Alw21I	GWGCWC	1 cut(s)	1249
Alw26I	GTCTC	3 cut(s)	267, 899, 1684
AlwI	GGATC	2 cut(s)	748, 1139
Aor13HI	TCCGGA	1 cut(s)	1216
AoxI	GGCC	2 cut(s)	643, 1261
ApeKI	GCWGC	4 cut(s)	407, 440, 1210, 1880
ApoI	RAATTY	2 cut(s)	1001, 1606
AseI	ATTAAT	1 cut(s)	587
AspS9I	GGNCC	3 cut(s)	643, 1052, 1389
AsuHPI	GGTGA	2 cut(s)	847, 1166
AvaII	GGWCC	2 cut(s)	1052, 1389
BarI	GAAGNNNNNNTAC	2 cut(s)	1701, 1733
BauI	CACGAG	2 cut(s)	321, 1581
BbrPI	CACGTG	1 cut(s)	554
BbsI	GAAGAC	1 cut(s)	1893
Bbv12I	GWGCWC	1 cut(s)	1249
BbvI	GCAGC	4 cut(s)	419, 427, 1197, 1867
BccI	CCATC	5 cut(s)	574, 924, 1122, 1694, 1798
BceAI	ACGGC	1 cut(s)	327
BcgI	CGANNNNNNTGC	1 cut(s)	1917
BciT130I	CCWGG	1 cut(s)	126
BclI	TGATCA	1 cut(s)	301
BcoDI	GTCTC	3 cut(s)	267, 899, 1684
BfaI	CTAG	4 cut(s)	569, 1149, 1193, 1939
BfmI	CTRYAG	4 cut(s)	405, 618, 664, 1170
BfrI	CTTAAG	2 cut(s)	1397, 1721
BisI	GCNGC	5 cut(s)	408, 441, 1211, 1821, 1881
BlsI	GCNGC	5 cut(s)	409, 442, 1212, 1822, 1882
BmcAI	AGTACT	1 cut(s)	519
Bme1390I	CCNGG	1 cut(s)	126
Bme18I	GGWCC	2 cut(s)	1052, 1389
BmgT120I	GGNCC	3 cut(s)	643, 1052, 1389
BmiI	GGNNCC	2 cut(s)	1053, 1845
BmrFI	CCNGG	1 cut(s)	126
BmrI	ACTGGG	1 cut(s)	1506
BmsI	GCATC	4 cut(s)	1062, 1119, 1222, 1688
BmuI	ACTGGG	1 cut(s)	1506
BpiI	GAAGAC	1 cut(s)	1893
BpmI	CTGGAG	2 cut(s)	18, 60
Bpu10I	CCTNAGC	1 cut(s)	315
BpuEI	CTTGAG	4 cut(s)	83, 333, 923, 1233
BsaAI	YACGTR	1 cut(s)	554
BsaBI	GATNNNNATC	2 cut(s)	212, 684
BsaI	GGTCTC	1 cut(s)	267
BsaJI	CCNNGG	2 cut(s)	125, 382
BsaWI	WCCGGW	2 cut(s)	1216, 1344
Bsc4I	CCNNNNNNNGG	2 cut(s)	1438, 1490
Bse1I	ACTGG	2 cut(s)	675, 1501
Bse3DI	GCAATG	2 cut(s)	105, 1815
Bse8I	GATNNNNATC	2 cut(s)	212, 684
BseAI	TCCGGA	1 cut(s)	1216
BseBI	CCWGG	1 cut(s)	126
BseDI	CCNNGG	2 cut(s)	125, 382
BseGI	GGATG	4 cut(s)	916, 1110, 1213, 1746
BseJI	GATNNNNATC	2 cut(s)	212, 684
BseLI	CCNNNNNNNGG	2 cut(s)	1438, 1490
BseMI	GCAATG	2 cut(s)	105, 1815
BseMII	CTCAG	7 cut(s)	72, 84, 741, 1047, 1109, 1154, 1451
BseNI	ACTGG	2 cut(s)	675, 1501
BseXI	GCAGC	4 cut(s)	419, 427, 1197, 1867
BshFI	GGCC	2 cut(s)	645, 1263
BsiHKAI	GWGCWC	1 cut(s)	1249
BsiSI	CCGG	2 cut(s)	1217, 1345
BslFI	GGGAC	1 cut(s)	541
BslI	CCNNNNNNNGG	2 cut(s)	1438, 1490
BsmAI	GTCTC	3 cut(s)	267, 899, 1684
BsmBI	CGTCTC	1 cut(s)	1684
BsmFI	GGGAC	1 cut(s)	541
BsmI	GAATGC	2 cut(s)	379, 486
BsnI	GGCC	2 cut(s)	645, 1263
Bso31I	GGTCTC	1 cut(s)	267
Bsp1286I	GDGCHC	1 cut(s)	1249
Bsp13I	TCCGGA	1 cut(s)	1216
Bsp1407I	TGTACA	1 cut(s)	1774
Bsp143I	GATC	5 cut(s)	268, 301, 753, 1144, 1425
BspACI	CCGC	3 cut(s)	1392, 1820, 1913
BspANI	GGCC	2 cut(s)	645, 1263
BspCNI	CTCAG	7 cut(s)	73, 85, 742, 1048, 1108, 1155, 1450
BspEI	TCCGGA	1 cut(s)	1216
BspHI	TCATGA	1 cut(s)	304
BspLI	GGNNCC	2 cut(s)	1053, 1845
BspMAI	CTGCAG	3 cut(s)	409, 668, 1174
BspPI	GGATC	2 cut(s)	748, 1139
BspTI	CTTAAG	2 cut(s)	1397, 1721
BspTNI	GGTCTC	1 cut(s)	267
BsrDI	GCAATG	2 cut(s)	105, 1815
BsrGI	TGTACA	1 cut(s)	1774
BsrI	ACTGG	2 cut(s)	675, 1501
BssECI	CCNNGG	2 cut(s)	125, 382
BssMI	GATC	5 cut(s)	268, 301, 753, 1144, 1425
BssSI	CACGAG	2 cut(s)	321, 1581
Bst2BI	CACGAG	2 cut(s)	321, 1581
Bst2UI	CCWGG	1 cut(s)	126
Bst4CI	ACNGT	8 cut(s)	56, 148, 278, 294, 522, 791, 987, 1932
Bst6I	CTCTTC	2 cut(s)	634, 1682
BstAFI	CTTAAG	2 cut(s)	1397, 1721
BstAPI	GCANNNNNTGC	2 cut(s)	374, 811
BstAUI	TGTACA	1 cut(s)	1774
BstBAI	YACGTR	1 cut(s)	554
BstC8I	GCNNGC	1 cut(s)	405
BstDEI	CTNAG	8 cut(s)	81, 93, 315, 750, 1056, 1095, 1163, 1437
BstF5I	GGATG	4 cut(s)	916, 1110, 1213, 1746
BstKTI	GATC	5 cut(s)	271, 304, 756, 1147, 1428
BstMAI	GTCTC	3 cut(s)	267, 899, 1684
BstMBI	GATC	5 cut(s)	268, 301, 753, 1144, 1425
BstMWI	GCNNNNNNNGC	5 cut(s)	344, 374, 581, 811, 1912
BstNI	CCWGG	1 cut(s)	126
BstNSI	RCATGY	2 cut(s)	814, 1784
BstSCI	CCNGG	1 cut(s)	124
BstSFI	CTRYAG	4 cut(s)	405, 618, 664, 1170
BstV1I	GCAGC	4 cut(s)	419, 427, 1197, 1867
BstV2I	GAAGAC	1 cut(s)	1893
BstX2I	RGATCY	1 cut(s)	753
BstYI	RGATCY	1 cut(s)	753
BsuRI	GGCC	2 cut(s)	645, 1263
BtsCI	GGATG	4 cut(s)	916, 1110, 1213, 1746
BtsIMutI	CAGTG	2 cut(s)	61, 1297
Cac8I	GCNNGC	1 cut(s)	405
CciI	TCATGA	1 cut(s)	304
Cfr13I	GGNCC	3 cut(s)	643, 1052, 1389
Csp6I	GTAC	5 cut(s)	518, 606, 1106, 1652, 1775
CviAII	CATG	9 cut(s)	305, 421, 488, 701, 713, 743, 811, 998, 1781
CviQI	GTAC	5 cut(s)	518, 606, 1106, 1652, 1775
DdeI	CTNAG	8 cut(s)	81, 93, 315, 750, 1056, 1095, 1163, 1437
DpnI	GATC	5 cut(s)	270, 303, 755, 1146, 1427
DpnII	GATC	5 cut(s)	268, 301, 753, 1144, 1425
DraI	TTTAAA	1 cut(s)	1489
Eam1104I	CTCTTC	2 cut(s)	634, 1682
EarI	CTCTTC	2 cut(s)	634, 1682
Eco31I	GGTCTC	1 cut(s)	267
Eco32I	GATATC	1 cut(s)	625
Eco47I	GGWCC	2 cut(s)	1052, 1389
Eco57I	CTGAAG	3 cut(s)	977, 1676, 1905
Eco72I	CACGTG	1 cut(s)	554
EcoO109I	RGGNCCY	1 cut(s)	1052
EcoRI	GAATTC	1 cut(s)	1001
EcoRII	CCWGG	1 cut(s)	124
EcoRV	GATATC	1 cut(s)	625
Esp3I	CGTCTC	1 cut(s)	1684
FaeI	CATG	9 cut(s)	308, 424, 491, 704, 716, 746, 814, 1001, 1784
FalI	AAGNNNNNCTT	2 cut(s)	1469, 1501
FaqI	GGGAC	1 cut(s)	541
FatI	CATG	9 cut(s)	304, 420, 487, 700, 712, 742, 810, 997, 1780
FbaI	TGATCA	1 cut(s)	301
Fnu4HI	GCNGC	5 cut(s)	408, 441, 1211, 1821, 1881
FokI	GGATG	4 cut(s)	903, 1097, 1200, 1753
Fsp4HI	GCNGC	5 cut(s)	408, 441, 1211, 1821, 1881
FspBI	CTAG	4 cut(s)	569, 1149, 1193, 1939
GluI	GCNGC	5 cut(s)	408, 441, 1211, 1821, 1881
GsuI	CTGGAG	2 cut(s)	18, 60
HaeIII	GGCC	2 cut(s)	645, 1263
HapII	CCGG	2 cut(s)	1217, 1345
Hin1II	CATG	9 cut(s)	308, 424, 491, 704, 716, 746, 814, 1001, 1784
HincII	GTYRAC	1 cut(s)	931
HindII	GTYRAC	1 cut(s)	931
HindIII	AAGCTT	1 cut(s)	1769
HinfI	GANTC	9 cut(s)	31, 176, 185, 1165, 1348, 1404, 1435, 1480, 1796
HpaII	CCGG	2 cut(s)	1217, 1345
HphI	GGTGA	2 cut(s)	847, 1166
Hpy166II	GTNNAC	4 cut(s)	931, 1586, 1652, 1795
Hpy188I	TCNGA	6 cut(s)	196, 207, 386, 690, 1068, 1801
Hpy8I	GTNNAC	4 cut(s)	931, 1586, 1652, 1795
HpyAV	CCTTC	4 cut(s)	418, 634, 1253, 1495
HpyCH4III	ACNGT	8 cut(s)	56, 148, 278, 294, 522, 791, 987, 1932
HpyCH4IV	ACGT	3 cut(s)	553, 693, 1693
HpyF10VI	GCNNNNNNNGC	5 cut(s)	344, 374, 581, 811, 1912
HpyF3I	CTNAG	8 cut(s)	81, 93, 315, 750, 1056, 1095, 1163, 1437
HpySE526I	ACGT	3 cut(s)	553, 693, 1693
Hsp92II	CATG	9 cut(s)	308, 424, 491, 704, 716, 746, 814, 1001, 1784
Kpn2I	TCCGGA	1 cut(s)	1216
Ksp22I	TGATCA	1 cut(s)	301
Kzo9I	GATC	5 cut(s)	268, 301, 753, 1144, 1425
LmnI	GCTCC	2 cut(s)	415, 1207
Lsp1109I	GCAGC	4 cut(s)	419, 427, 1197, 1867
LweI	GCATC	4 cut(s)	1062, 1119, 1222, 1688
MaeI	CTAG	4 cut(s)	569, 1149, 1193, 1939
MaeII	ACGT	3 cut(s)	553, 693, 1693
MaeIII	GTNAC	4 cut(s)	454, 853, 1381, 1418
MalI	GATC	5 cut(s)	270, 303, 755, 1146, 1427
MboI	GATC	5 cut(s)	268, 301, 753, 1144, 1425
MfeI	CAATTG	2 cut(s)	219, 1408
MflI	RGATCY	1 cut(s)	753
MhlI	GDGCHC	1 cut(s)	1249
MlyI	GAGTC	5 cut(s)	25, 194, 1174, 1429, 1790
MroI	TCCGGA	1 cut(s)	1216
MseI	TTAA	5 cut(s)	587, 1008, 1398, 1488, 1722
MslI	CAYNNNNRTG	1 cut(s)	711
MspA1I	CMGCKG	1 cut(s)	80
MspCI	CTTAAG	2 cut(s)	1397, 1721
MspI	CCGG	2 cut(s)	1217, 1345
MspR9I	CCNGG	1 cut(s)	126
MunI	CAATTG	2 cut(s)	219, 1408
Mva1269I	GAATGC	2 cut(s)	379, 486
MvaI	CCWGG	1 cut(s)	126
MwoI	GCNNNNNNNGC	5 cut(s)	344, 374, 581, 811, 1912
NdeII	GATC	5 cut(s)	268, 301, 753, 1144, 1425
NlaIII	CATG	9 cut(s)	308, 424, 491, 704, 716, 746, 814, 1001, 1784
NlaIV	GGNNCC	2 cut(s)	1053, 1845
NmuCI	GTSAC	2 cut(s)	853, 1381
NspI	RCATGY	2 cut(s)	814, 1784
PagI	TCATGA	1 cut(s)	304
PciI	ACATGT	1 cut(s)	1780
PcsI	WCGNNNNNNNCGW	1 cut(s)	328
PctI	GAATGC	2 cut(s)	379, 486
PfeI	GAWTC	4 cut(s)	176, 1348, 1404, 1480
PflFI	GACNNNGTC	1 cut(s)	184
PkrI	GCNGC	5 cut(s)	409, 442, 1212, 1822, 1882
PleI	GAGTC	5 cut(s)	25, 193, 1173, 1429, 1790
PmaCI	CACGTG	1 cut(s)	554
PmlI	CACGTG	1 cut(s)	554
PpsI	GAGTC	5 cut(s)	25, 193, 1173, 1429, 1790
Ppu21I	YACGTR	1 cut(s)	554
PpuMI	RGGWCCY	1 cut(s)	1052
PscI	ACATGT	1 cut(s)	1780
PshBI	ATTAAT	1 cut(s)	587
PsiI	TTATAA	2 cut(s)	654, 1202
Psp1406I	AACGTT	1 cut(s)	693
Psp5II	RGGWCCY	1 cut(s)	1052
Psp6I	CCWGG	1 cut(s)	124
PspCI	CACGTG	1 cut(s)	554
PspGI	CCWGG	1 cut(s)	124
PspN4I	GGNNCC	2 cut(s)	1053, 1845
PspPI	GGNCC	3 cut(s)	643, 1052, 1389
PspPPI	RGGWCCY	1 cut(s)	1052
PstI	CTGCAG	3 cut(s)	409, 668, 1174
PsuI	RGATCY	1 cut(s)	753
PsyI	GACNNNGTC	1 cut(s)	184
PvuII	CAGCTG	1 cut(s)	80
RsaI	GTAC	5 cut(s)	519, 607, 1107, 1653, 1776
RsaNI	GTAC	5 cut(s)	518, 606, 1106, 1652, 1775
RseI	CAYNNNNRTG	1 cut(s)	711
SaqAI	TTAA	5 cut(s)	587, 1008, 1398, 1488, 1722
SatI	GCNGC	5 cut(s)	408, 441, 1211, 1821, 1881
Sau3AI	GATC	5 cut(s)	268, 301, 753, 1144, 1425
Sau96I	GGNCC	3 cut(s)	643, 1052, 1389
SbfI	CCTGCAGG	1 cut(s)	1174
ScaI	AGTACT	1 cut(s)	519
SchI	GAGTC	5 cut(s)	25, 194, 1174, 1429, 1790
ScrFI	CCNGG	1 cut(s)	126
SdaI	CCTGCAGG	1 cut(s)	1174
SduI	GDGCHC	1 cut(s)	1249
SfaNI	GCATC	4 cut(s)	1062, 1119, 1222, 1688
SfcI	CTRYAG	4 cut(s)	405, 618, 664, 1170
SinI	GGWCC	2 cut(s)	1052, 1389
SmiMI	CAYNNNNRTG	1 cut(s)	711
SmlI	CTYRAG	6 cut(s)	62, 348, 902, 1248, 1397, 1721
SmoI	CTYRAG	6 cut(s)	62, 348, 902, 1248, 1397, 1721
Sse8387I	CCTGCAGG	1 cut(s)	1174
SsiI	CCGC	3 cut(s)	1392, 1820, 1913
SspI	AATATT	2 cut(s)	801, 1327
SspMI	CTAG	4 cut(s)	569, 1149, 1193, 1939
StyD4I	CCNGG	1 cut(s)	124
TaaI	ACNGT	8 cut(s)	56, 148, 278, 294, 522, 791, 987, 1932
TaiI	ACGT	3 cut(s)	556, 696, 1696
TaqI	TCGA	8 cut(s)	174, 179, 271, 430, 596, 1333, 1899, 1927
TatI	WGTACW	4 cut(s)	517, 605, 1651, 1774
TauI	GCSGC	1 cut(s)	1823
TfiI	GAWTC	4 cut(s)	176, 1348, 1404, 1480
Tru1I	TTAA	5 cut(s)	587, 1008, 1398, 1488, 1722
Tru9I	TTAA	5 cut(s)	587, 1008, 1398, 1488, 1722
TscAI	CASTG	2 cut(s)	61, 1297
TseFI	GTSAC	2 cut(s)	853, 1381
TseI	GCWGC	4 cut(s)	407, 440, 1210, 1880
Tsp45I	GTSAC	2 cut(s)	853, 1381
TspDTI	ATGAA	9 cut(s)	321, 437, 621, 653, 674, 695, 729, 1014, 1261
TspGWI	ACGGA	2 cut(s)	1178, 1618
TspRI	CASTG	2 cut(s)	61, 1297
Tth111I	GACNNNGTC	1 cut(s)	184
Vha464I	CTTAAG	2 cut(s)	1397, 1721
VpaK11BI	GGWCC	2 cut(s)	1052, 1389
VspI	ATTAAT	1 cut(s)	587
XapI	RAATTY	2 cut(s)	1001, 1606
XceI	RCATGY	2 cut(s)	814, 1784
XspI	CTAG	4 cut(s)	569, 1149, 1193, 1939
ZrmI	AGTACT	1 cut(s)	519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.