Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20780 |
| fragaria_vesca | FvH4_3g43550 |
| malus_domestica | MD03G1021100.v1.1 |
| prunus_persica | Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1 |
| pyrus_communis | pycom03g01820 |
| rosa_chinensis | RchiOBHm_Chr5g0078101 |
| rosa_laevigata | RLG00000036751 |
| rosa_multiflora | Rmu_sc0008741.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00000360 Rroxscaffold_1G00004120 |
| rosa_rugosa | Rorug05G0458500 |
| rosa_samantha | Rh5AG513100 |
| rosa_wichuraiana | Rw5G047590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 654, 1235 |
| AccIII | TCCGGA | 1 cut(s) | 1249 |
| AciI | CCGC | 1 cut(s) | 1425 |
| AclWI | GGATC | 1 cut(s) | 1172 |
| AcsI | RAATTY | 4 cut(s) | 857, 1034, 1380, 1666 |
| AcuI | CTGAAG | 1 cut(s) | 1010 |
| AcvI | CACGTG | 1 cut(s) | 554 |
| AfaI | GTAC | 5 cut(s) | 519, 607, 1140, 1713, 1836 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1471, 1523 |
| AflII | CTTAAG | 2 cut(s) | 1430, 1781 |
| AflIII | ACRYGT | 2 cut(s) | 551, 1840 |
| AgsI | TTSAA | 9 cut(s) | 224, 247, 544, 992, 1002, 1292, 1357, 1592, 1847 |
| AjnI | CCWGG | 1 cut(s) | 124 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1056, 1088 |
| Alw21I | GWGCWC | 1 cut(s) | 1282 |
| Alw26I | GTCTC | 3 cut(s) | 267, 932, 1744 |
| AlwI | GGATC | 1 cut(s) | 1172 |
| Aor13HI | TCCGGA | 1 cut(s) | 1249 |
| AoxI | GGCC | 3 cut(s) | 45, 643, 1294 |
| ApeKI | GCWGC | 3 cut(s) | 407, 440, 1243 |
| ApoI | RAATTY | 4 cut(s) | 857, 1034, 1380, 1666 |
| AseI | ATTAAT | 1 cut(s) | 587 |
| AspS9I | GGNCC | 3 cut(s) | 643, 1085, 1422 |
| AsuHPI | GGTGA | 2 cut(s) | 880, 1199 |
| AvaII | GGWCC | 2 cut(s) | 1085, 1422 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1761, 1793 |
| BauI | CACGAG | 2 cut(s) | 321, 1641 |
| BbrPI | CACGTG | 1 cut(s) | 554 |
| Bbv12I | GWGCWC | 1 cut(s) | 1282 |
| BbvI | GCAGC | 3 cut(s) | 419, 427, 1230 |
| BccI | CCATC | 4 cut(s) | 574, 957, 1155, 1754 |
| BceAI | ACGGC | 1 cut(s) | 327 |
| BciT130I | CCWGG | 1 cut(s) | 126 |
| BclI | TGATCA | 1 cut(s) | 301 |
| BcoDI | GTCTC | 3 cut(s) | 267, 932, 1744 |
| BfaI | CTAG | 3 cut(s) | 569, 1182, 1226 |
| BfmI | CTRYAG | 4 cut(s) | 405, 618, 664, 1203 |
| BfrI | CTTAAG | 2 cut(s) | 1430, 1781 |
| BisI | GCNGC | 3 cut(s) | 408, 441, 1244 |
| BlsI | GCNGC | 3 cut(s) | 409, 442, 1245 |
| BmcAI | AGTACT | 2 cut(s) | 519, 1713 |
| Bme1390I | CCNGG | 1 cut(s) | 126 |
| Bme18I | GGWCC | 2 cut(s) | 1085, 1422 |
| BmgT120I | GGNCC | 3 cut(s) | 643, 1085, 1422 |
| BmiI | GGNNCC | 1 cut(s) | 1086 |
| BmrFI | CCNGG | 1 cut(s) | 126 |
| BmrI | ACTGGG | 1 cut(s) | 1539 |
| BmsI | GCATC | 4 cut(s) | 1095, 1152, 1255, 1748 |
| BmuI | ACTGGG | 1 cut(s) | 1539 |
| BpmI | CTGGAG | 2 cut(s) | 18, 60 |
| Bpu10I | CCTNAGC | 1 cut(s) | 315 |
| BpuEI | CTTGAG | 4 cut(s) | 83, 333, 956, 1266 |
| BsaAI | YACGTR | 1 cut(s) | 554 |
| BsaBI | GATNNNNATC | 2 cut(s) | 212, 684 |
| BsaI | GGTCTC | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 2 cut(s) | 125, 382 |
| BsaWI | WCCGGW | 1 cut(s) | 1249 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1471, 1523 |
| Bse1I | ACTGG | 2 cut(s) | 675, 1534 |
| Bse3DI | GCAATG | 1 cut(s) | 105 |
| Bse8I | GATNNNNATC | 2 cut(s) | 212, 684 |
| BseAI | TCCGGA | 1 cut(s) | 1249 |
| BseBI | CCWGG | 1 cut(s) | 126 |
| BseDI | CCNNGG | 2 cut(s) | 125, 382 |
| BseGI | GGATG | 4 cut(s) | 949, 1143, 1246, 1806 |
| BseJI | GATNNNNATC | 2 cut(s) | 212, 684 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1471, 1523 |
| BseMI | GCAATG | 1 cut(s) | 105 |
| BseMII | CTCAG | 8 cut(s) | 72, 84, 186, 834, 1080, 1142, 1187, 1484 |
| BseNI | ACTGG | 2 cut(s) | 675, 1534 |
| BseXI | GCAGC | 3 cut(s) | 419, 427, 1230 |
| BshFI | GGCC | 3 cut(s) | 47, 645, 1296 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1282 |
| BsiSI | CCGG | 1 cut(s) | 1250 |
| BslFI | GGGAC | 1 cut(s) | 541 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1471, 1523 |
| BsmAI | GTCTC | 3 cut(s) | 267, 932, 1744 |
| BsmBI | CGTCTC | 1 cut(s) | 1744 |
| BsmFI | GGGAC | 1 cut(s) | 541 |
| BsmI | GAATGC | 3 cut(s) | 379, 486, 1602 |
| BsnI | GGCC | 3 cut(s) | 47, 645, 1296 |
| Bso31I | GGTCTC | 1 cut(s) | 267 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1282 |
| Bsp13I | TCCGGA | 1 cut(s) | 1249 |
| Bsp1407I | TGTACA | 1 cut(s) | 1834 |
| Bsp143I | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| BspACI | CCGC | 1 cut(s) | 1425 |
| BspANI | GGCC | 3 cut(s) | 47, 645, 1296 |
| BspCNI | CTCAG | 8 cut(s) | 73, 85, 187, 835, 1081, 1141, 1188, 1483 |
| BspEI | TCCGGA | 1 cut(s) | 1249 |
| BspHI | TCATGA | 1 cut(s) | 304 |
| BspLI | GGNNCC | 1 cut(s) | 1086 |
| BspMAI | CTGCAG | 3 cut(s) | 409, 668, 1207 |
| BspPI | GGATC | 1 cut(s) | 1172 |
| BspTI | CTTAAG | 2 cut(s) | 1430, 1781 |
| BspTNI | GGTCTC | 1 cut(s) | 267 |
| BsrDI | GCAATG | 1 cut(s) | 105 |
| BsrGI | TGTACA | 1 cut(s) | 1834 |
| BsrI | ACTGG | 2 cut(s) | 675, 1534 |
| BssECI | CCNNGG | 2 cut(s) | 125, 382 |
| BssMI | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| BssSI | CACGAG | 2 cut(s) | 321, 1641 |
| BssT1I | CCWWGG | 1 cut(s) | 382 |
| Bst2BI | CACGAG | 2 cut(s) | 321, 1641 |
| Bst2UI | CCWGG | 1 cut(s) | 126 |
| Bst4CI | ACNGT | 8 cut(s) | 56, 148, 278, 294, 522, 791, 1020, 1598 |
| Bst6I | CTCTTC | 2 cut(s) | 634, 1742 |
| BstAFI | CTTAAG | 2 cut(s) | 1430, 1781 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 374, 811 |
| BstAUI | TGTACA | 1 cut(s) | 1834 |
| BstBAI | YACGTR | 1 cut(s) | 554 |
| BstC8I | GCNNGC | 1 cut(s) | 405 |
| BstDEI | CTNAG | 9 cut(s) | 81, 93, 195, 315, 843, 1089, 1128, 1196, 1470 |
| BstF5I | GGATG | 4 cut(s) | 949, 1143, 1246, 1806 |
| BstKTI | GATC | 4 cut(s) | 271, 304, 1180, 1461 |
| BstMAI | GTCTC | 3 cut(s) | 267, 932, 1744 |
| BstMBI | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 44, 344, 374, 581, 811 |
| BstNI | CCWGG | 1 cut(s) | 126 |
| BstNSI | RCATGY | 2 cut(s) | 814, 1844 |
| BstSCI | CCNGG | 1 cut(s) | 124 |
| BstSFI | CTRYAG | 4 cut(s) | 405, 618, 664, 1203 |
| BstV1I | GCAGC | 3 cut(s) | 419, 427, 1230 |
| BsuRI | GGCC | 3 cut(s) | 47, 645, 1296 |
| BtsCI | GGATG | 4 cut(s) | 949, 1143, 1246, 1806 |
| BtsIMutI | CAGTG | 3 cut(s) | 61, 1330, 1594 |
| Cac8I | GCNNGC | 1 cut(s) | 405 |
| CciI | TCATGA | 1 cut(s) | 304 |
| Cfr13I | GGNCC | 3 cut(s) | 643, 1085, 1422 |
| Csp6I | GTAC | 5 cut(s) | 518, 606, 1139, 1712, 1835 |
| CviAII | CATG | 9 cut(s) | 305, 421, 488, 701, 713, 743, 811, 1031, 1841 |
| CviQI | GTAC | 5 cut(s) | 518, 606, 1139, 1712, 1835 |
| DdeI | CTNAG | 9 cut(s) | 81, 93, 195, 315, 843, 1089, 1128, 1196, 1470 |
| DpnI | GATC | 4 cut(s) | 270, 303, 1179, 1460 |
| DpnII | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| DraI | TTTAAA | 2 cut(s) | 856, 1522 |
| Eam1104I | CTCTTC | 2 cut(s) | 634, 1742 |
| EarI | CTCTTC | 2 cut(s) | 634, 1742 |
| Eco130I | CCWWGG | 1 cut(s) | 382 |
| Eco31I | GGTCTC | 1 cut(s) | 267 |
| Eco32I | GATATC | 1 cut(s) | 625 |
| Eco47I | GGWCC | 2 cut(s) | 1085, 1422 |
| Eco57I | CTGAAG | 1 cut(s) | 1010 |
| Eco72I | CACGTG | 1 cut(s) | 554 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1085 |
| EcoRI | GAATTC | 2 cut(s) | 1034, 1380 |
| EcoRII | CCWGG | 1 cut(s) | 124 |
| EcoRV | GATATC | 1 cut(s) | 625 |
| EcoT14I | CCWWGG | 1 cut(s) | 382 |
| ErhI | CCWWGG | 1 cut(s) | 382 |
| Esp3I | CGTCTC | 1 cut(s) | 1744 |
| FaeI | CATG | 9 cut(s) | 308, 424, 491, 704, 716, 746, 814, 1034, 1844 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1502, 1534 |
| FaqI | GGGAC | 1 cut(s) | 541 |
| FatI | CATG | 9 cut(s) | 304, 420, 487, 700, 712, 742, 810, 1030, 1840 |
| FbaI | TGATCA | 1 cut(s) | 301 |
| Fnu4HI | GCNGC | 3 cut(s) | 408, 441, 1244 |
| FokI | GGATG | 4 cut(s) | 936, 1130, 1233, 1813 |
| Fsp4HI | GCNGC | 3 cut(s) | 408, 441, 1244 |
| FspBI | CTAG | 3 cut(s) | 569, 1182, 1226 |
| GluI | GCNGC | 3 cut(s) | 408, 441, 1244 |
| GsuI | CTGGAG | 2 cut(s) | 18, 60 |
| HaeIII | GGCC | 3 cut(s) | 47, 645, 1296 |
| HapII | CCGG | 1 cut(s) | 1250 |
| Hin1II | CATG | 9 cut(s) | 308, 424, 491, 704, 716, 746, 814, 1034, 1844 |
| HincII | GTYRAC | 1 cut(s) | 964 |
| HindII | GTYRAC | 1 cut(s) | 964 |
| HindIII | AAGCTT | 1 cut(s) | 1829 |
| HinfI | GANTC | 7 cut(s) | 31, 176, 185, 1198, 1437, 1468, 1513 |
| HpaII | CCGG | 1 cut(s) | 1250 |
| HphI | GGTGA | 2 cut(s) | 880, 1199 |
| Hpy166II | GTNNAC | 2 cut(s) | 964, 1646 |
| Hpy188I | TCNGA | 5 cut(s) | 196, 690, 868, 877, 1101 |
| Hpy8I | GTNNAC | 2 cut(s) | 964, 1646 |
| HpyAV | CCTTC | 5 cut(s) | 37, 418, 634, 1286, 1528 |
| HpyCH4III | ACNGT | 8 cut(s) | 56, 148, 278, 294, 522, 791, 1020, 1598 |
| HpyCH4IV | ACGT | 3 cut(s) | 553, 1410, 1753 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 44, 344, 374, 581, 811 |
| HpyF3I | CTNAG | 9 cut(s) | 81, 93, 195, 315, 843, 1089, 1128, 1196, 1470 |
| HpySE526I | ACGT | 3 cut(s) | 553, 1410, 1753 |
| Hsp92II | CATG | 9 cut(s) | 308, 424, 491, 704, 716, 746, 814, 1034, 1844 |
| Kpn2I | TCCGGA | 1 cut(s) | 1249 |
| Ksp22I | TGATCA | 1 cut(s) | 301 |
| Kzo9I | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| LmnI | GCTCC | 2 cut(s) | 415, 1240 |
| Lsp1109I | GCAGC | 3 cut(s) | 419, 427, 1230 |
| LweI | GCATC | 4 cut(s) | 1095, 1152, 1255, 1748 |
| MaeI | CTAG | 3 cut(s) | 569, 1182, 1226 |
| MaeII | ACGT | 3 cut(s) | 553, 1410, 1753 |
| MaeIII | GTNAC | 4 cut(s) | 454, 886, 1414, 1451 |
| MalI | GATC | 4 cut(s) | 270, 303, 1179, 1460 |
| MboI | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| MfeI | CAATTG | 2 cut(s) | 219, 1441 |
| MhlI | GDGCHC | 1 cut(s) | 1282 |
| MlyI | GAGTC | 4 cut(s) | 25, 194, 1207, 1462 |
| MroI | TCCGGA | 1 cut(s) | 1249 |
| MseI | TTAA | 7 cut(s) | 587, 855, 1041, 1173, 1431, 1521, 1782 |
| MslI | CAYNNNNRTG | 1 cut(s) | 711 |
| MspA1I | CMGCKG | 2 cut(s) | 80, 1609 |
| MspCI | CTTAAG | 2 cut(s) | 1430, 1781 |
| MspI | CCGG | 1 cut(s) | 1250 |
| MspR9I | CCNGG | 1 cut(s) | 126 |
| MunI | CAATTG | 2 cut(s) | 219, 1441 |
| Mva1269I | GAATGC | 3 cut(s) | 379, 486, 1602 |
| MvaI | CCWGG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 44, 344, 374, 581, 811 |
| NdeII | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| NlaIII | CATG | 9 cut(s) | 308, 424, 491, 704, 716, 746, 814, 1034, 1844 |
| NlaIV | GGNNCC | 1 cut(s) | 1086 |
| NmuCI | GTSAC | 2 cut(s) | 886, 1414 |
| NspI | RCATGY | 2 cut(s) | 814, 1844 |
| PagI | TCATGA | 1 cut(s) | 304 |
| PciI | ACATGT | 1 cut(s) | 1840 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 328 |
| PctI | GAATGC | 3 cut(s) | 379, 486, 1602 |
| PfeI | GAWTC | 3 cut(s) | 176, 1437, 1513 |
| PflFI | GACNNNGTC | 2 cut(s) | 184, 1412 |
| PkrI | GCNGC | 3 cut(s) | 409, 442, 1245 |
| PleI | GAGTC | 4 cut(s) | 25, 193, 1206, 1462 |
| PmaCI | CACGTG | 1 cut(s) | 554 |
| PmlI | CACGTG | 1 cut(s) | 554 |
| PpsI | GAGTC | 4 cut(s) | 25, 193, 1206, 1462 |
| Ppu21I | YACGTR | 1 cut(s) | 554 |
| PpuMI | RGGWCCY | 1 cut(s) | 1085 |
| PscI | ACATGT | 1 cut(s) | 1840 |
| PshBI | ATTAAT | 1 cut(s) | 587 |
| PsiI | TTATAA | 2 cut(s) | 654, 1235 |
| Psp5II | RGGWCCY | 1 cut(s) | 1085 |
| Psp6I | CCWGG | 1 cut(s) | 124 |
| PspCI | CACGTG | 1 cut(s) | 554 |
| PspGI | CCWGG | 1 cut(s) | 124 |
| PspN4I | GGNNCC | 1 cut(s) | 1086 |
| PspPI | GGNCC | 3 cut(s) | 643, 1085, 1422 |
| PspPPI | RGGWCCY | 1 cut(s) | 1085 |
| PstI | CTGCAG | 3 cut(s) | 409, 668, 1207 |
| PsyI | GACNNNGTC | 2 cut(s) | 184, 1412 |
| PvuII | CAGCTG | 2 cut(s) | 80, 1609 |
| RsaI | GTAC | 5 cut(s) | 519, 607, 1140, 1713, 1836 |
| RsaNI | GTAC | 5 cut(s) | 518, 606, 1139, 1712, 1835 |
| RseI | CAYNNNNRTG | 1 cut(s) | 711 |
| SaqAI | TTAA | 7 cut(s) | 587, 855, 1041, 1173, 1431, 1521, 1782 |
| SatI | GCNGC | 3 cut(s) | 408, 441, 1244 |
| Sau3AI | GATC | 4 cut(s) | 268, 301, 1177, 1458 |
| Sau96I | GGNCC | 3 cut(s) | 643, 1085, 1422 |
| SbfI | CCTGCAGG | 1 cut(s) | 1207 |
| ScaI | AGTACT | 2 cut(s) | 519, 1713 |
| SchI | GAGTC | 4 cut(s) | 25, 194, 1207, 1462 |
| ScrFI | CCNGG | 1 cut(s) | 126 |
| SdaI | CCTGCAGG | 1 cut(s) | 1207 |
| SduI | GDGCHC | 1 cut(s) | 1282 |
| SfaNI | GCATC | 4 cut(s) | 1095, 1152, 1255, 1748 |
| SfcI | CTRYAG | 4 cut(s) | 405, 618, 664, 1203 |
| SinI | GGWCC | 2 cut(s) | 1085, 1422 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 711 |
| SmlI | CTYRAG | 6 cut(s) | 62, 348, 935, 1281, 1430, 1781 |
| SmoI | CTYRAG | 6 cut(s) | 62, 348, 935, 1281, 1430, 1781 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1207 |
| SsiI | CCGC | 1 cut(s) | 1425 |
| SspI | AATATT | 1 cut(s) | 1360 |
| SspMI | CTAG | 3 cut(s) | 569, 1182, 1226 |
| StyD4I | CCNGG | 1 cut(s) | 124 |
| StyI | CCWWGG | 1 cut(s) | 382 |
| TaaI | ACNGT | 8 cut(s) | 56, 148, 278, 294, 522, 791, 1020, 1598 |
| TaiI | ACGT | 3 cut(s) | 556, 1413, 1756 |
| TaqI | TCGA | 6 cut(s) | 179, 271, 430, 596, 1366, 1378 |
| TatI | WGTACW | 4 cut(s) | 517, 605, 1711, 1834 |
| TfiI | GAWTC | 3 cut(s) | 176, 1437, 1513 |
| Tru1I | TTAA | 7 cut(s) | 587, 855, 1041, 1173, 1431, 1521, 1782 |
| Tru9I | TTAA | 7 cut(s) | 587, 855, 1041, 1173, 1431, 1521, 1782 |
| TscAI | CASTG | 3 cut(s) | 61, 1330, 1601 |
| TseFI | GTSAC | 2 cut(s) | 886, 1414 |
| TseI | GCWGC | 3 cut(s) | 407, 440, 1243 |
| Tsp45I | GTSAC | 2 cut(s) | 886, 1414 |
| TspGWI | ACGGA | 2 cut(s) | 1211, 1678 |
| TspRI | CASTG | 3 cut(s) | 61, 1330, 1601 |
| Tth111I | GACNNNGTC | 2 cut(s) | 184, 1412 |
| Vha464I | CTTAAG | 2 cut(s) | 1430, 1781 |
| VpaK11BI | GGWCC | 2 cut(s) | 1085, 1422 |
| VspI | ATTAAT | 1 cut(s) | 587 |
| XapI | RAATTY | 4 cut(s) | 857, 1034, 1380, 1666 |
| XceI | RCATGY | 2 cut(s) | 814, 1844 |
| XspI | CTAG | 3 cut(s) | 569, 1182, 1226 |
| ZrmI | AGTACT | 2 cut(s) | 519, 1713 |