Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0016056

Physical Location & Seq

Genomic Coordinates Forward (+)

82397522 .. 82404669

Gene Structure 7148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G047590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGCGTGCTCGTGAATCGTCACTGATCAATGATGAAAGAGATAGCAAGAAATCTCCAGCTGAGTTCTTCGCTGAGAACAAGAACATTGCTGGATTTGATAATCCAGGGAAATGTCTTTATACTACTGTGAGGGAACTTGTGGAGAACTCACTCGATTCGACAGAGTCCATATCTGAGCTTCCTTTGATAGAAATCACAATTGAAGATATTGAGAAAAGCAAGTTCAATTCTATGATTGGTCTTGTTGATCGAGACCGTGTTGATGAGGAACTGTATGATGATCATGAAACGGCTAAGGCTCGTGAGAAACGATTAGCAAAGGAAGCTCAAGCCCAAGAATTACAAGCAAAGAATGCTTCCCTTGGAAAGAAAATCAAAGAGCCTGCAGCTCCAAAGACCATGAAGGGTCGAGGTGGGGCTGCATTTTACAGGGTTACTTGCAAGGATAATGGACGAGGAATGCCACATGATGACATTCCAAATATGTTTGGACGAGTACTGTCTGGGACAAAATATGGCTTGAAGCAGACACGTGGAAAGTTTGGTCTAGGTGCAAAGATGGCATTAATTTGGTCGAAGATGAGTACAGGGCTTCCTATAGATATCTCTTCATCAATGAAGGGCCAAAGTTATAATTCTTTCTGCAGACTGGATATAGATATTCATCGGAACATTCCTCATGTTCATATACATGAAAAACGGGATAGCAAGGATAGGTGGCATGGTGCTGAAATCCAAGTTGTTATTGAGGGAAATTGGACAACTTACCGTTCCAAGATATTGCATTACATGCGACAAATGGCTGTTATCACTCCTTATGCTGAGTTCATTTTTAAATTTGTTTCAGATGTTTCTGATAAAAATGTCACCATAAGGTTTGCACGAAGAACTGATGTAATGCCTCCTGTTCCTCTTGAGACAAAGCACCATCCCTCATCTGTTGACTTATTGCTAATCAAACGCCTCATTGAAGAAACTTCAAAGCAGAACCTTTTACAGTTTCTTCAGCATGAATTCGTTAATATAGGAAAATCCTATGCTGAACGACTAATTGGGGAATTGGGTCCTGAGTTCAGTCCGAAGATGCCTGTGAAATCTCTAACTTCTCAGCAAATTGTACGCATCCATCAGTTATTTCGTCAAGCCAAGTTTAATGATCCTAGTGGTGATTGCCTGAGTCCTGCAGGGGAATACAATCTCCGTCTAGGAATTATAAAGGAGCTGCATCCGGAGTTGGTTGCTACTTATTCTGGAAGTGCTCAAGTTTTTGAAGGCCACCCATTCATTGTGGAAGCTGGTGTCAGTGTTGGTGGAAAAGATGTCAAACAAGGTTTGAATATTTTTCGATTTGCAAATCGAATTCCACTTCTTTTTGAGCAAGGTGCTGACGTTGTCACAAGGACCGCCCTTAAGAGAATCAATTGGAGTAGTTACAAGATCAACCAGACTCAGGATAAAGTTGGTGTTTTTGTGAGTATTGTAAGCACAAAGATTCCCTTTAAAGGAACTGGGAAGGAGTATATTGGAGATGATATAACTGAAATAGCTTCTGCTGTCAAGTCTGCCATTCAACACTGTTGCATTCAGCTGAAAACCAAGATAGTGAAGAATATCCAAGCTCGTGAACAAAAAGAGAGAAAACGGAATTTGAGCAAGTATGCTGAAAATGTTGCTGGTGCTGTGTGTGGAGTACTGAAACAAATGCAACAAATACAAGCATCAAAGAAGAGACGTTATGATGGCAAGGAAGCAGAAATACTTAAGAAATTGTCATCTGGGATGATTACAAAAGAAATGGTCAAGGAAAAGCTTGTACAACATGTTGAACAGAAATTTCTGCTAGGGTCATGTAAATGTCTCCCACACATGGTGCTACCAAACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0003674 GO:0003735 GO:0003824 GO:0003916 GO:0003918 GO:0005198 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0007389 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009330 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009888 GO:0009987 GO:0010026 GO:0010033 GO:0010467 GO:0014070 GO:0015935 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0017111 GO:0019538 GO:0022402 GO:0022613 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0033993 GO:0034641 GO:0034645 GO:0042023 GO:0042221 GO:0042254 GO:0042623 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044446 GO:0044464 GO:0044786 GO:0046483 GO:0046983 GO:0048856 GO:0048869 GO:0050896 GO:0061505 GO:0071704 GO:0071840 GO:0090304 GO:0090558 GO:0140097 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HATPase_c_3 Topo-VIb_trans

Protein Analysis

628

Amino Acids

70.88

Weight (kDa)

9.38

Isoelectric Point (pI)

46.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Topo-VIb_trans	PF09239	387 - 546	8.3e-56	Topoisomerase VI B subunit, transducer

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20780
fragaria_vesca	FvH4_3g43550
malus_domestica	MD03G1021100.v1.1
prunus_persica	Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1 Prupe.6G018600_v2.0.a1
pyrus_communis	pycom03g01820
rosa_chinensis	RchiOBHm_Chr5g0078101
rosa_laevigata	RLG00000036751
rosa_multiflora	Rmu_sc0008741.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000360 Rroxscaffold_1G00004120
rosa_rugosa	Rorug05G0458500
rosa_samantha	Rh5AG513100
rosa_wichuraiana	Rw5G047590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	633, 1214
AccIII	TCCGGA	1 cut(s)	1228
AciI	CCGC	1 cut(s)	1404
AclWI	GGATC	1 cut(s)	1151
AcsI	RAATTY	5 cut(s)	836, 1013, 1359, 1645, 1832
AcuI	CTGAAG	1 cut(s)	989
AcvI	CACGTG	1 cut(s)	533
AdeI	CACNNNGTG	1 cut(s)	1870
AfaI	GTAC	5 cut(s)	498, 586, 1119, 1692, 1815
AfiI	CCNNNNNNNGG	3 cut(s)	1450, 1502, 1867
AflII	CTTAAG	2 cut(s)	1409, 1760
AflIII	ACRYGT	2 cut(s)	530, 1819
AgsI	TTSAA	9 cut(s)	203, 226, 523, 971, 981, 1271, 1336, 1571, 1826
AjnI	CCWGG	1 cut(s)	103
AjuI	GAANNNNNNNTTGG	2 cut(s)	1035, 1067
Alw21I	GWGCWC	2 cut(s)	10, 1261
Alw26I	GTCTC	4 cut(s)	246, 911, 1723, 1862
AlwI	GGATC	1 cut(s)	1151
Aor13HI	TCCGGA	1 cut(s)	1228
AoxI	GGCC	2 cut(s)	622, 1273
ApeKI	GCWGC	3 cut(s)	386, 419, 1222
ApoI	RAATTY	5 cut(s)	836, 1013, 1359, 1645, 1832
AseI	ATTAAT	1 cut(s)	566
AspS9I	GGNCC	3 cut(s)	622, 1064, 1401
AsuHPI	GGTGA	2 cut(s)	859, 1178
AvaII	GGWCC	2 cut(s)	1064, 1401
BarI	GAAGNNNNNNTAC	2 cut(s)	1740, 1772
BauI	CACGAG	3 cut(s)	9, 300, 1620
BbrPI	CACGTG	1 cut(s)	533
Bbv12I	GWGCWC	2 cut(s)	10, 1261
BbvI	GCAGC	3 cut(s)	398, 406, 1209
BccI	CCATC	4 cut(s)	553, 936, 1134, 1733
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	1 cut(s)	105
BclI	TGATCA	2 cut(s)	24, 280
BcoDI	GTCTC	4 cut(s)	246, 911, 1723, 1862
BfaI	CTAG	4 cut(s)	548, 1161, 1205, 1841
BfmI	CTRYAG	4 cut(s)	384, 597, 643, 1182
BfrI	CTTAAG	2 cut(s)	1409, 1760
BisI	GCNGC	3 cut(s)	387, 420, 1223
BlsI	GCNGC	3 cut(s)	388, 421, 1224
BmcAI	AGTACT	2 cut(s)	498, 1692
Bme1390I	CCNGG	1 cut(s)	105
Bme18I	GGWCC	2 cut(s)	1064, 1401
BmgT120I	GGNCC	3 cut(s)	622, 1064, 1401
BmiI	GGNNCC	1 cut(s)	1065
BmrFI	CCNGG	1 cut(s)	105
BmrI	ACTGGG	1 cut(s)	1518
BmsI	GCATC	4 cut(s)	1074, 1131, 1234, 1727
BmuI	ACTGGG	1 cut(s)	1518
BpmI	CTGGAG	1 cut(s)	39
Bpu10I	CCTNAGC	1 cut(s)	294
BpuEI	CTTGAG	3 cut(s)	312, 935, 1245
BsaAI	YACGTR	1 cut(s)	533
BsaBI	GATNNNNATC	2 cut(s)	191, 663
BsaI	GGTCTC	1 cut(s)	246
BsaJI	CCNNGG	2 cut(s)	104, 361
BsaWI	WCCGGW	1 cut(s)	1228
Bsc4I	CCNNNNNNNGG	3 cut(s)	1450, 1502, 1867
Bse1I	ACTGG	2 cut(s)	654, 1513
Bse3DI	GCAATG	1 cut(s)	84
Bse8I	GATNNNNATC	2 cut(s)	191, 663
BseAI	TCCGGA	1 cut(s)	1228
BseBI	CCWGG	1 cut(s)	105
BseDI	CCNNGG	2 cut(s)	104, 361
BseGI	GGATG	4 cut(s)	928, 1122, 1225, 1785
BseJI	GATNNNNATC	2 cut(s)	191, 663
BseLI	CCNNNNNNNGG	3 cut(s)	1450, 1502, 1867
BseMI	GCAATG	1 cut(s)	84
BseMII	CTCAG	8 cut(s)	51, 63, 165, 813, 1059, 1121, 1166, 1463
BseNI	ACTGG	2 cut(s)	654, 1513
BseXI	GCAGC	3 cut(s)	398, 406, 1209
BshFI	GGCC	2 cut(s)	624, 1275
BsiHKAI	GWGCWC	2 cut(s)	10, 1261
BsiSI	CCGG	1 cut(s)	1229
BslFI	GGGAC	1 cut(s)	520
BslI	CCNNNNNNNGG	3 cut(s)	1450, 1502, 1867
BsmAI	GTCTC	4 cut(s)	246, 911, 1723, 1862
BsmBI	CGTCTC	1 cut(s)	1723
BsmFI	GGGAC	1 cut(s)	520
BsmI	GAATGC	3 cut(s)	358, 465, 1581
BsnI	GGCC	2 cut(s)	624, 1275
Bso31I	GGTCTC	1 cut(s)	246
Bsp1286I	GDGCHC	2 cut(s)	10, 1261
Bsp13I	TCCGGA	1 cut(s)	1228
Bsp1407I	TGTACA	1 cut(s)	1813
Bsp143I	GATC	5 cut(s)	24, 247, 280, 1156, 1437
BspACI	CCGC	1 cut(s)	1404
BspANI	GGCC	2 cut(s)	624, 1275
BspCNI	CTCAG	8 cut(s)	52, 64, 166, 814, 1060, 1120, 1167, 1462
BspEI	TCCGGA	1 cut(s)	1228
BspHI	TCATGA	1 cut(s)	283
BspLI	GGNNCC	1 cut(s)	1065
BspMAI	CTGCAG	3 cut(s)	388, 647, 1186
BspPI	GGATC	1 cut(s)	1151
BspTI	CTTAAG	2 cut(s)	1409, 1760
BspTNI	GGTCTC	1 cut(s)	246
BsrDI	GCAATG	1 cut(s)	84
BsrGI	TGTACA	1 cut(s)	1813
BsrI	ACTGG	2 cut(s)	654, 1513
BssECI	CCNNGG	2 cut(s)	104, 361
BssMI	GATC	5 cut(s)	24, 247, 280, 1156, 1437
BssSI	CACGAG	3 cut(s)	9, 300, 1620
BssT1I	CCWWGG	1 cut(s)	361
Bst2BI	CACGAG	3 cut(s)	9, 300, 1620
Bst2UI	CCWGG	1 cut(s)	105
Bst4CI	ACNGT	7 cut(s)	127, 257, 273, 501, 770, 999, 1577
Bst6I	CTCTTC	2 cut(s)	613, 1721
BstAFI	CTTAAG	2 cut(s)	1409, 1760
BstAPI	GCANNNNNTGC	2 cut(s)	353, 790
BstAUI	TGTACA	1 cut(s)	1813
BstBAI	YACGTR	1 cut(s)	533
BstC8I	GCNNGC	2 cut(s)	6, 384
BstDEI	CTNAG	9 cut(s)	60, 72, 174, 294, 822, 1068, 1107, 1175, 1449
BstF5I	GGATG	4 cut(s)	928, 1122, 1225, 1785
BstKTI	GATC	5 cut(s)	27, 250, 283, 1159, 1440
BstMAI	GTCTC	4 cut(s)	246, 911, 1723, 1862
BstMBI	GATC	5 cut(s)	24, 247, 280, 1156, 1437
BstMWI	GCNNNNNNNGC	4 cut(s)	323, 353, 560, 790
BstNI	CCWGG	1 cut(s)	105
BstNSI	RCATGY	2 cut(s)	793, 1823
BstSCI	CCNGG	1 cut(s)	103
BstSFI	CTRYAG	4 cut(s)	384, 597, 643, 1182
BstV1I	GCAGC	3 cut(s)	398, 406, 1209
BsuRI	GGCC	2 cut(s)	624, 1275
BtsCI	GGATG	4 cut(s)	928, 1122, 1225, 1785
BtsIMutI	CAGTG	3 cut(s)	20, 1309, 1573
Cac8I	GCNNGC	2 cut(s)	6, 384
CciI	TCATGA	1 cut(s)	283
Cfr13I	GGNCC	3 cut(s)	622, 1064, 1401
Csp6I	GTAC	5 cut(s)	497, 585, 1118, 1691, 1814
CviQI	GTAC	5 cut(s)	497, 585, 1118, 1691, 1814
DdeI	CTNAG	9 cut(s)	60, 72, 174, 294, 822, 1068, 1107, 1175, 1449
DpnI	GATC	5 cut(s)	26, 249, 282, 1158, 1439
DpnII	GATC	5 cut(s)	24, 247, 280, 1156, 1437
DraI	TTTAAA	2 cut(s)	835, 1501
DraIII	CACNNNGTG	1 cut(s)	1870
Eam1104I	CTCTTC	2 cut(s)	613, 1721
EarI	CTCTTC	2 cut(s)	613, 1721
Eco130I	CCWWGG	1 cut(s)	361
Eco31I	GGTCTC	1 cut(s)	246
Eco32I	GATATC	1 cut(s)	604
Eco47I	GGWCC	2 cut(s)	1064, 1401
Eco57I	CTGAAG	1 cut(s)	989
Eco72I	CACGTG	1 cut(s)	533
EcoO109I	RGGNCCY	1 cut(s)	1064
EcoRI	GAATTC	2 cut(s)	1013, 1359
EcoRII	CCWGG	1 cut(s)	103
EcoRV	GATATC	1 cut(s)	604
EcoT14I	CCWWGG	1 cut(s)	361
ErhI	CCWWGG	1 cut(s)	361
Esp3I	CGTCTC	1 cut(s)	1723
FalI	AAGNNNNNCTT	2 cut(s)	1481, 1513
FaqI	GGGAC	1 cut(s)	520
FbaI	TGATCA	2 cut(s)	24, 280
Fnu4HI	GCNGC	3 cut(s)	387, 420, 1223
FokI	GGATG	4 cut(s)	915, 1109, 1212, 1792
Fsp4HI	GCNGC	3 cut(s)	387, 420, 1223
FspBI	CTAG	4 cut(s)	548, 1161, 1205, 1841
GluI	GCNGC	3 cut(s)	387, 420, 1223
GsuI	CTGGAG	1 cut(s)	39
HaeIII	GGCC	2 cut(s)	624, 1275
HapII	CCGG	1 cut(s)	1229
HincII	GTYRAC	1 cut(s)	943
HindII	GTYRAC	1 cut(s)	943
HindIII	AAGCTT	1 cut(s)	1808
HinfI	GANTC	7 cut(s)	14, 155, 164, 1177, 1416, 1447, 1492
HpaII	CCGG	1 cut(s)	1229
HphI	GGTGA	2 cut(s)	859, 1178
Hpy166II	GTNNAC	2 cut(s)	943, 1625
Hpy188I	TCNGA	5 cut(s)	175, 669, 847, 856, 1080
Hpy8I	GTNNAC	2 cut(s)	943, 1625
HpyAV	CCTTC	4 cut(s)	397, 613, 1265, 1507
HpyCH4III	ACNGT	7 cut(s)	127, 257, 273, 501, 770, 999, 1577
HpyCH4IV	ACGT	3 cut(s)	532, 1389, 1732
HpyF10VI	GCNNNNNNNGC	4 cut(s)	323, 353, 560, 790
HpyF3I	CTNAG	9 cut(s)	60, 72, 174, 294, 822, 1068, 1107, 1175, 1449
HpySE526I	ACGT	3 cut(s)	532, 1389, 1732
Kpn2I	TCCGGA	1 cut(s)	1228
Ksp22I	TGATCA	2 cut(s)	24, 280
Kzo9I	GATC	5 cut(s)	24, 247, 280, 1156, 1437
LmnI	GCTCC	2 cut(s)	394, 1219
Lsp1109I	GCAGC	3 cut(s)	398, 406, 1209
LweI	GCATC	4 cut(s)	1074, 1131, 1234, 1727
MaeI	CTAG	4 cut(s)	548, 1161, 1205, 1841
MaeII	ACGT	3 cut(s)	532, 1389, 1732
MaeIII	GTNAC	5 cut(s)	18, 433, 865, 1393, 1430
MalI	GATC	5 cut(s)	26, 249, 282, 1158, 1439
MboI	GATC	5 cut(s)	24, 247, 280, 1156, 1437
MfeI	CAATTG	2 cut(s)	198, 1420
MhlI	GDGCHC	2 cut(s)	10, 1261
MlyI	GAGTC	3 cut(s)	173, 1186, 1441
MroI	TCCGGA	1 cut(s)	1228
MseI	TTAA	7 cut(s)	566, 834, 1020, 1152, 1410, 1500, 1761
MslI	CAYNNNNRTG	2 cut(s)	690, 1852
MspA1I	CMGCKG	2 cut(s)	59, 1588
MspCI	CTTAAG	2 cut(s)	1409, 1760
MspI	CCGG	1 cut(s)	1229
MspR9I	CCNGG	1 cut(s)	105
MunI	CAATTG	2 cut(s)	198, 1420
Mva1269I	GAATGC	3 cut(s)	358, 465, 1581
MvaI	CCWGG	1 cut(s)	105
MwoI	GCNNNNNNNGC	4 cut(s)	323, 353, 560, 790
NdeII	GATC	5 cut(s)	24, 247, 280, 1156, 1437
NlaIV	GGNNCC	1 cut(s)	1065
NmuCI	GTSAC	3 cut(s)	18, 865, 1393
NspI	RCATGY	2 cut(s)	793, 1823
PagI	TCATGA	1 cut(s)	283
PciI	ACATGT	1 cut(s)	1819
PcsI	WCGNNNNNNNCGW	1 cut(s)	307
PctI	GAATGC	3 cut(s)	358, 465, 1581
PfeI	GAWTC	4 cut(s)	14, 155, 1416, 1492
PflFI	GACNNNGTC	2 cut(s)	163, 1391
PkrI	GCNGC	3 cut(s)	388, 421, 1224
PleI	GAGTC	3 cut(s)	172, 1185, 1441
PmaCI	CACGTG	1 cut(s)	533
PmlI	CACGTG	1 cut(s)	533
PpsI	GAGTC	3 cut(s)	172, 1185, 1441
Ppu21I	YACGTR	1 cut(s)	533
PpuMI	RGGWCCY	1 cut(s)	1064
PscI	ACATGT	1 cut(s)	1819
PshBI	ATTAAT	1 cut(s)	566
PsiI	TTATAA	2 cut(s)	633, 1214
Psp5II	RGGWCCY	1 cut(s)	1064
Psp6I	CCWGG	1 cut(s)	103
PspCI	CACGTG	1 cut(s)	533
PspGI	CCWGG	1 cut(s)	103
PspN4I	GGNNCC	1 cut(s)	1065
PspPI	GGNCC	3 cut(s)	622, 1064, 1401
PspPPI	RGGWCCY	1 cut(s)	1064
PstI	CTGCAG	3 cut(s)	388, 647, 1186
PsyI	GACNNNGTC	2 cut(s)	163, 1391
PvuII	CAGCTG	2 cut(s)	59, 1588
RsaI	GTAC	5 cut(s)	498, 586, 1119, 1692, 1815
RsaNI	GTAC	5 cut(s)	497, 585, 1118, 1691, 1814
RseI	CAYNNNNRTG	2 cut(s)	690, 1852
SaqAI	TTAA	7 cut(s)	566, 834, 1020, 1152, 1410, 1500, 1761
SatI	GCNGC	3 cut(s)	387, 420, 1223
Sau3AI	GATC	5 cut(s)	24, 247, 280, 1156, 1437
Sau96I	GGNCC	3 cut(s)	622, 1064, 1401
SbfI	CCTGCAGG	1 cut(s)	1186
ScaI	AGTACT	2 cut(s)	498, 1692
SchI	GAGTC	3 cut(s)	173, 1186, 1441
ScrFI	CCNGG	1 cut(s)	105
SdaI	CCTGCAGG	1 cut(s)	1186
SduI	GDGCHC	2 cut(s)	10, 1261
SfaNI	GCATC	4 cut(s)	1074, 1131, 1234, 1727
SfcI	CTRYAG	4 cut(s)	384, 597, 643, 1182
SinI	GGWCC	2 cut(s)	1064, 1401
SmiMI	CAYNNNNRTG	2 cut(s)	690, 1852
SmlI	CTYRAG	5 cut(s)	327, 914, 1260, 1409, 1760
SmoI	CTYRAG	5 cut(s)	327, 914, 1260, 1409, 1760
Sse8387I	CCTGCAGG	1 cut(s)	1186
SsiI	CCGC	1 cut(s)	1404
SspI	AATATT	1 cut(s)	1339
SspMI	CTAG	4 cut(s)	548, 1161, 1205, 1841
StyD4I	CCNGG	1 cut(s)	103
StyI	CCWWGG	1 cut(s)	361
TaaI	ACNGT	7 cut(s)	127, 257, 273, 501, 770, 999, 1577
TaiI	ACGT	3 cut(s)	535, 1392, 1735
TaqI	TCGA	7 cut(s)	153, 158, 250, 409, 575, 1345, 1357
TatI	WGTACW	4 cut(s)	496, 584, 1690, 1813
TfiI	GAWTC	4 cut(s)	14, 155, 1416, 1492
Tru1I	TTAA	7 cut(s)	566, 834, 1020, 1152, 1410, 1500, 1761
Tru9I	TTAA	7 cut(s)	566, 834, 1020, 1152, 1410, 1500, 1761
TscAI	CASTG	3 cut(s)	27, 1309, 1580
TseFI	GTSAC	3 cut(s)	18, 865, 1393
TseI	GCWGC	3 cut(s)	386, 419, 1222
Tsp45I	GTSAC	3 cut(s)	18, 865, 1393
TspGWI	ACGGA	2 cut(s)	1190, 1657
TspRI	CASTG	3 cut(s)	27, 1309, 1580
Tth111I	GACNNNGTC	2 cut(s)	163, 1391
Vha464I	CTTAAG	2 cut(s)	1409, 1760
VpaK11BI	GGWCC	2 cut(s)	1064, 1401
VspI	ATTAAT	1 cut(s)	566
XapI	RAATTY	5 cut(s)	836, 1013, 1359, 1645, 1832
XceI	RCATGY	2 cut(s)	793, 1823
XspI	CTAG	4 cut(s)	548, 1161, 1205, 1841
ZrmI	AGTACT	2 cut(s)	498, 1692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.