RNA pol II accessory factor, Cdc73 family, C-terminal
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22590 |
| fragaria_vesca | FvH4_4g16100 FvH4_4g16100 |
| malus_domestica | MD13G1196100.v1.1 MD16G1196600.v1.1 |
| prunus_persica | Prupe.1G016800_v2.0.a1 |
| pyrus_communis | pycom13g16820 pycom16g16540 |
| rosa_chinensis | RchiOBHm_Chr4g0415641 |
| rosa_laevigata | RLG00000008053 |
| rosa_multiflora | Rmu_sc0001194.1_g000007 Rmu_sc0004599.1_g000013 |
| rosa_roxburghii | Rroxscaffold_5G00359440 |
| rosa_rugosa | Rorug04G0136100 |
| rosa_samantha | Rh4AG196800 Rh4BG195400 Rh4CG207600 Rh4DG194700 |
| rosa_wichuraiana | Rw4G016740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 5 cut(s) | 110, 400, 402, 410, 512 |
| AciI | CCGC | 4 cut(s) | 239, 998, 1090, 1171 |
| AclI | AACGTT | 1 cut(s) | 807 |
| AclWI | GGATC | 5 cut(s) | 12, 94, 474, 993, 1056 |
| AcsI | RAATTY | 2 cut(s) | 26, 556 |
| AcuI | CTGAAG | 3 cut(s) | 282, 503, 666 |
| AdeI | CACNNNGTG | 1 cut(s) | 175 |
| AfaI | GTAC | 2 cut(s) | 125, 168 |
| AgsI | TTSAA | 8 cut(s) | 326, 431, 499, 824, 877, 970, 1066, 1097 |
| AluBI | AGCT | 6 cut(s) | 71, 389, 644, 721, 734, 1187 |
| AluI | AGCT | 6 cut(s) | 71, 389, 644, 721, 734, 1187 |
| Alw26I | GTCTC | 5 cut(s) | 36, 110, 149, 574, 600 |
| AlwI | GGATC | 5 cut(s) | 12, 94, 474, 993, 1056 |
| Ama87I | CYCGRG | 2 cut(s) | 772, 1214 |
| AoxI | GGCC | 1 cut(s) | 1037 |
| ApeKI | GCWGC | 2 cut(s) | 1187, 1190 |
| ApoI | RAATTY | 2 cut(s) | 26, 556 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 216, 248 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 26 |
| AspLEI | GCGC | 2 cut(s) | 110, 402 |
| AsuC2I | CCSGG | 1 cut(s) | 236 |
| AsuHPI | GGTGA | 6 cut(s) | 271, 461, 565, 695, 758, 1138 |
| AvaI | CYCGRG | 2 cut(s) | 772, 1214 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 150, 182 |
| BbvI | GCAGC | 2 cut(s) | 1174, 1177 |
| BccI | CCATC | 2 cut(s) | 605, 821 |
| BceAI | ACGGC | 1 cut(s) | 489 |
| BcnI | CCSGG | 1 cut(s) | 236 |
| BcoDI | GTCTC | 5 cut(s) | 36, 110, 149, 574, 600 |
| BfaI | CTAG | 1 cut(s) | 155 |
| BfmI | CTRYAG | 1 cut(s) | 541 |
| BisI | GCNGC | 3 cut(s) | 1172, 1188, 1191 |
| BlsI | GCNGC | 3 cut(s) | 1173, 1189, 1192 |
| Bme1390I | CCNGG | 1 cut(s) | 236 |
| BmeT110I | CYCGRG | 2 cut(s) | 772, 1214 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 236 |
| BmsI | GCATC | 2 cut(s) | 691, 1183 |
| Bpu10I | CCTNAGC | 1 cut(s) | 858 |
| BpuMI | CCSGG | 1 cut(s) | 236 |
| BsaAI | YACGTR | 1 cut(s) | 175 |
| BsaBI | GATNNNNATC | 3 cut(s) | 85, 705, 984 |
| BsaJI | CCNNGG | 1 cut(s) | 37 |
| BsaWI | WCCGGW | 2 cut(s) | 281, 446 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 107, 137 |
| Bse8I | GATNNNNATC | 3 cut(s) | 85, 705, 984 |
| BseDI | CCNNGG | 1 cut(s) | 37 |
| BseJI | GATNNNNATC | 3 cut(s) | 85, 705, 984 |
| BseMII | CTCAG | 1 cut(s) | 243 |
| BseRI | GAGGAG | 3 cut(s) | 54, 257, 1232 |
| BseXI | GCAGC | 2 cut(s) | 1174, 1177 |
| BseYI | CCCAGC | 1 cut(s) | 734 |
| Bsh1236I | CGCG | 5 cut(s) | 110, 400, 402, 410, 512 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1238 |
| BshFI | GGCC | 1 cut(s) | 1039 |
| BsiEI | CGRYCG | 1 cut(s) | 1238 |
| BsiHKCI | CYCGRG | 2 cut(s) | 772, 1214 |
| BsiSI | CCGG | 3 cut(s) | 236, 282, 447 |
| BslFI | GGGAC | 2 cut(s) | 218, 755 |
| BsmAI | GTCTC | 5 cut(s) | 36, 110, 149, 574, 600 |
| BsmFI | GGGAC | 2 cut(s) | 218, 755 |
| BsmI | GAATGC | 1 cut(s) | 1240 |
| BsnI | GGCC | 1 cut(s) | 1039 |
| BsoBI | CYCGRG | 2 cut(s) | 772, 1214 |
| BspACI | CCGC | 4 cut(s) | 239, 998, 1090, 1171 |
| BspANI | GGCC | 1 cut(s) | 1039 |
| BspCNI | CTCAG | 1 cut(s) | 242 |
| BspFNI | CGCG | 5 cut(s) | 110, 400, 402, 410, 512 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 5 cut(s) | 12, 94, 474, 993, 1056 |
| BspQI | GCTCTTC | 1 cut(s) | 494 |
| BssECI | CCNNGG | 1 cut(s) | 37 |
| Bst4CI | ACNGT | 3 cut(s) | 220, 895, 1126 |
| Bst6I | CTCTTC | 4 cut(s) | 280, 354, 494, 570 |
| BstBAI | YACGTR | 1 cut(s) | 175 |
| BstDEI | CTNAG | 5 cut(s) | 229, 624, 717, 858, 1245 |
| BstFNI | CGCG | 5 cut(s) | 110, 400, 402, 410, 512 |
| BstHHI | GCGC | 2 cut(s) | 110, 402 |
| BstMAI | GTCTC | 5 cut(s) | 36, 110, 149, 574, 600 |
| BstMCI | CGRYCG | 1 cut(s) | 1238 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 328 |
| BstSCI | CCNGG | 1 cut(s) | 234 |
| BstSFI | CTRYAG | 1 cut(s) | 541 |
| BstUI | CGCG | 5 cut(s) | 110, 400, 402, 410, 512 |
| BstV1I | GCAGC | 2 cut(s) | 1174, 1177 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| BsuRI | GGCC | 1 cut(s) | 1039 |
| BtsI | GCAGTG | 1 cut(s) | 1139 |
| BtsIMutI | CAGTG | 2 cut(s) | 527, 1139 |
| CfoI | GCGC | 2 cut(s) | 110, 402 |
| CseI | GACGC | 1 cut(s) | 518 |
| Csp6I | GTAC | 2 cut(s) | 124, 167 |
| CviAII | CATG | 3 cut(s) | 105, 197, 1052 |
| CviQI | GTAC | 2 cut(s) | 124, 167 |
| DdeI | CTNAG | 5 cut(s) | 229, 624, 717, 858, 1245 |
| DraI | TTTAAA | 2 cut(s) | 730, 1030 |
| DraIII | CACNNNGTG | 1 cut(s) | 175 |
| Eam1104I | CTCTTC | 4 cut(s) | 280, 354, 494, 570 |
| EarI | CTCTTC | 4 cut(s) | 280, 354, 494, 570 |
| Eco57I | CTGAAG | 3 cut(s) | 282, 503, 666 |
| Eco88I | CYCGRG | 2 cut(s) | 772, 1214 |
| EcoRI | GAATTC | 2 cut(s) | 26, 556 |
| FaeI | CATG | 3 cut(s) | 108, 200, 1055 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 277, 309, 804, 836 |
| FaqI | GGGAC | 2 cut(s) | 218, 755 |
| FatI | CATG | 3 cut(s) | 104, 196, 1051 |
| Fnu4HI | GCNGC | 3 cut(s) | 1172, 1188, 1191 |
| Fsp4HI | GCNGC | 3 cut(s) | 1172, 1188, 1191 |
| FspBI | CTAG | 1 cut(s) | 155 |
| GlaI | GCGC | 2 cut(s) | 109, 401 |
| GluI | GCNGC | 3 cut(s) | 1172, 1188, 1191 |
| GsaI | CCCAGC | 1 cut(s) | 738 |
| HaeIII | GGCC | 1 cut(s) | 1039 |
| HapII | CCGG | 3 cut(s) | 236, 282, 447 |
| HgaI | GACGC | 1 cut(s) | 518 |
| HhaI | GCGC | 2 cut(s) | 110, 402 |
| Hin1II | CATG | 3 cut(s) | 108, 200, 1055 |
| Hin6I | GCGC | 2 cut(s) | 108, 400 |
| HinP1I | GCGC | 2 cut(s) | 108, 400 |
| HindIII | AAGCTT | 1 cut(s) | 719 |
| HpaII | CCGG | 3 cut(s) | 236, 282, 447 |
| HphI | GGTGA | 6 cut(s) | 271, 461, 565, 695, 758, 1138 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 9 cut(s) | 38, 86, 91, 258, 301, 348, 603, 786, 900 |
| Hpy188III | TCNNGA | 8 cut(s) | 19, 58, 377, 533, 772, 821, 1153, 1178 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| Hpy99I | CGWCG | 1 cut(s) | 115 |
| HpyAV | CCTTC | 4 cut(s) | 743, 862, 969, 1009 |
| HpyCH4III | ACNGT | 3 cut(s) | 220, 895, 1126 |
| HpyCH4IV | ACGT | 3 cut(s) | 174, 490, 807 |
| HpyCH4V | TGCA | 3 cut(s) | 211, 416, 1193 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 328 |
| HpyF3I | CTNAG | 5 cut(s) | 229, 624, 717, 858, 1245 |
| HpySE526I | ACGT | 3 cut(s) | 174, 490, 807 |
| Hsp92II | CATG | 3 cut(s) | 108, 200, 1055 |
| HspAI | GCGC | 2 cut(s) | 108, 400 |
| LguI | GCTCTTC | 1 cut(s) | 494 |
| LmnI | GCTCC | 2 cut(s) | 68, 641 |
| Lsp1109I | GCAGC | 2 cut(s) | 1174, 1177 |
| LweI | GCATC | 2 cut(s) | 691, 1183 |
| MaeI | CTAG | 1 cut(s) | 155 |
| MaeII | ACGT | 3 cut(s) | 174, 490, 807 |
| MaeIII | GTNAC | 3 cut(s) | 241, 506, 931 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MluCI | AATT | 4 cut(s) | 26, 73, 382, 556 |
| MlyI | GAGTC | 3 cut(s) | 297, 352, 602 |
| MmeI | TCCRAC | 2 cut(s) | 46, 507 |
| MroXI | GAANNNNTTC | 1 cut(s) | 26 |
| MseI | TTAA | 6 cut(s) | 635, 729, 810, 852, 1029, 1044 |
| MspI | CCGG | 3 cut(s) | 236, 282, 447 |
| MspR9I | CCNGG | 1 cut(s) | 236 |
| Mva1269I | GAATGC | 1 cut(s) | 1240 |
| MvnI | CGCG | 5 cut(s) | 110, 400, 402, 410, 512 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 328 |
| NciI | CCSGG | 1 cut(s) | 236 |
| NlaIII | CATG | 3 cut(s) | 108, 200, 1055 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 2 cut(s) | 506, 931 |
| PaeR7I | CTCGAG | 1 cut(s) | 1214 |
| PciSI | GCTCTTC | 1 cut(s) | 494 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 95, 119 |
| PctI | GAATGC | 1 cut(s) | 1240 |
| PdmI | GAANNNNTTC | 1 cut(s) | 26 |
| PfeI | GAWTC | 8 cut(s) | 81, 181, 302, 475, 514, 529, 1080, 1112 |
| PkrI | GCNGC | 3 cut(s) | 1173, 1189, 1192 |
| PleI | GAGTC | 3 cut(s) | 296, 351, 601 |
| PpsI | GAGTC | 3 cut(s) | 296, 351, 601 |
| Ppu21I | YACGTR | 1 cut(s) | 175 |
| Psp1406I | AACGTT | 1 cut(s) | 807 |
| PspFI | CCCAGC | 1 cut(s) | 734 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspXI | VCTCGAGB | 1 cut(s) | 1214 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| RsaI | GTAC | 2 cut(s) | 125, 168 |
| RsaNI | GTAC | 2 cut(s) | 124, 167 |
| SapI | GCTCTTC | 1 cut(s) | 494 |
| SaqAI | TTAA | 6 cut(s) | 635, 729, 810, 852, 1029, 1044 |
| SatI | GCNGC | 3 cut(s) | 1172, 1188, 1191 |
| SchI | GAGTC | 3 cut(s) | 297, 352, 602 |
| ScrFI | CCNGG | 1 cut(s) | 236 |
| SfaNI | GCATC | 2 cut(s) | 691, 1183 |
| SfcI | CTRYAG | 1 cut(s) | 541 |
| Sfr274I | CTCGAG | 1 cut(s) | 1214 |
| SlaI | CTCGAG | 1 cut(s) | 1214 |
| SmlI | CTYRAG | 1 cut(s) | 1214 |
| SmoI | CTYRAG | 1 cut(s) | 1214 |
| Sse9I | AATT | 4 cut(s) | 26, 73, 382, 556 |
| SsiI | CCGC | 4 cut(s) | 239, 998, 1090, 1171 |
| SspI | AATATT | 1 cut(s) | 95 |
| SspMI | CTAG | 1 cut(s) | 155 |
| StyD4I | CCNGG | 1 cut(s) | 234 |
| TaaI | ACNGT | 3 cut(s) | 220, 895, 1126 |
| TaiI | ACGT | 3 cut(s) | 177, 493, 810 |
| TaqI | TCGA | 8 cut(s) | 57, 270, 367, 478, 532, 1110, 1154, 1215 |
| TaqII | GACCGA | 2 cut(s) | 1197, 1224 |
| TasI | AATT | 4 cut(s) | 26, 73, 382, 556 |
| TatI | WGTACW | 1 cut(s) | 166 |
| TauI | GCSGC | 1 cut(s) | 1174 |
| TfiI | GAWTC | 8 cut(s) | 81, 181, 302, 475, 514, 529, 1080, 1112 |
| Tru1I | TTAA | 6 cut(s) | 635, 729, 810, 852, 1029, 1044 |
| Tru9I | TTAA | 6 cut(s) | 635, 729, 810, 852, 1029, 1044 |
| TscAI | CASTG | 2 cut(s) | 527, 1139 |
| TseFI | GTSAC | 2 cut(s) | 506, 931 |
| TseI | GCWGC | 2 cut(s) | 1187, 1190 |
| Tsp45I | GTSAC | 2 cut(s) | 506, 931 |
| TspDTI | ATGAA | 3 cut(s) | 713, 881, 957 |
| TspGWI | ACGGA | 1 cut(s) | 128 |
| TspRI | CASTG | 2 cut(s) | 527, 1139 |
| XapI | RAATTY | 2 cut(s) | 26, 556 |
| XhoI | CTCGAG | 1 cut(s) | 1214 |
| XmnI | GAANNNNTTC | 1 cut(s) | 26 |
| XspI | CTAG | 1 cut(s) | 155 |