MD16G1196600.v1.1

RNA pol II accessory factor, Cdc73 family, C-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0011953
Physical Location & Seq
Forward (+)
17487774 .. 17489988
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1196600.v1.1.491

Sequence Viewer

Length: 1239 bp
ATGGACCCGCTCTCGGCCCTCCGCGACTTCACAGTCCGCGGTGACCTCGACAAGATCGTCCGGGTCAACGACGAGTTCCGGTTCGGCTCCGACTACAGCTTCCCCTGCCACGCAGAGACCGCCTACCGCTCCAAGCAAGGCAACCTCTACACCCTCGAAACCCTCCTTTATTACGTCAACAACCACCATATCAAGCACACCGACTACATCCAGTGCGCCCGCACCCAGGGAATCCCCTCCGTCACTTTCCCCGACCGCAAGCCCCTCCTCGACTACCTCACCGGAAAGATCTCCTCCTCCGACTCCATAGAGTTCCTCCTCCCTCCCCAAAACGACGCCGTCCACCTCACCAAAATCTCTACCACCCTCGATGCCGCCAGCAACGCCAACCTCATCAGCAGCGACAACGGCCATTACGACGCTTCGGATTCTCGGGTTTTTACTCAAATCGAGACGCCGGTGGACTACATGTCGTTGATTTGCTCCAGCGAGCGCCCGTTGAAGGACCGGGAGGGATTGCTGGAGTGTAAAGGTAGGAACTTTTACGCTGTTTTGACCTCGGCGACGAAGCGAGAAGAGGAACGACAGCGTATTGAGTCCCAGCAGAGGAAGGATGGGCTGGTGGCGAAGAGTAGGCTAATGGGTTCCGACGAGAGGGGCATGACCGGGTTCGGAGACGAATCGGGTTACGACCCGAACCCGAAGCCTAAATTGCACCTCAAGGGGGGTAAAATTGGGGAAGGTGTGCCCATAATTTTGGTGCCCAGTGCTTTTCAGACGCTGATCACGATTTACAATGTGAAGGAGTTTTTGGAAGATGGGGTTTATATACCCACTGATGTGAAGGTGAAGCAGATGAAAGGGGCGAAGCCGGACTGCGTGACTGTGCAGAAGAAGTTTAGCAGGGATAGGGATCGGGTGGTGACAGCTTATGAGGTTAGGGATAAGCCCTCGGCGTTGAAGGCGGAGGATTGGGACCGGGTTGTGGCGGTTTTCGTGTTGGGGAAGGAGTGGCAGTTCAAGGATTGGCCCTTCAAGGACCATGTTGAGATTTTCAATAAGATTATGGGGTTTTTCATGCGGTTCGAAGATGATAGCGTGGAGTCGGCAAAGATTGTGAAGCAGTGGAATGTGAAGATCATCTCGATTAGCAAGAATAAACGACATCAAGATAGAGCTGCTGCATTGGAGGTGTGGGACAGATTAGAAGAATTTGTGCGGTCAAGAGCACACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000428 GO:0000988 GO:0000989 GO:0000993 GO:0001076 GO:0001098 GO:0001099 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016071 GO:0016569 GO:0016570 GO:0016571 GO:0016591 GO:0016593 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0030880 GO:0031123 GO:0031124 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034402 GO:0034622 GO:0034641 GO:0034968 GO:0036211 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0055029 GO:0060255 GO:0061458 GO:0061695 GO:0065003 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0140110 GO:1901360 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC73_C CDC73_N

Protein Analysis

413

Amino Acids

47.09

Weight (kDa)

7.15

Isoelectric Point (pI)

35.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC73_N PF16050 2 - 104 8.9e-20 Paf1 complex subunit CDC73 N-terminal
CDC73_C PF05179 249 - 405 3.7e-51 RNA pol II accessory factor, Cdc73 family, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011953)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22590
fragaria_vesca FvH4_4g16100 FvH4_4g16100
malus_domestica MD13G1196100.v1.1 MD16G1196600.v1.1
prunus_persica Prupe.1G016800_v2.0.a1
pyrus_communis pycom13g16820 pycom16g16540
rosa_chinensis RchiOBHm_Chr4g0415641
rosa_laevigata RLG00000008053
rosa_multiflora Rmu_sc0001194.1_g000007 Rmu_sc0004599.1_g000013
rosa_roxburghii Rroxscaffold_5G00359440
rosa_rugosa Rorug04G0136100
rosa_samantha Rh4AG196800 Rh4BG195400 Rh4CG207600 Rh4DG194700
rosa_wichuraiana Rw4G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 32, 56
AccB1I GGYRCC 1 cut(s) 760
AccBSI CCGCTC 2 cut(s) 10, 129
AccII CGCG 2 cut(s) 24, 39
AclWI GGATC 1 cut(s) 921
AcoI YGGCCR 1 cut(s) 409
AcsI RAATTY 1 cut(s) 1211
AcyI GRCGYC 2 cut(s) 336, 455
AfiI CCNNNNNNNGG 7 cut(s) 13, 226, 502, 606, 654, 724, 985
AflIII ACRYGT 1 cut(s) 468
AgsI TTSAA 5 cut(s) 502, 961, 1021, 1036, 1057
AhdI GACNNNNNGTC 1 cut(s) 469
AjnI CCWGG 1 cut(s) 225
AjuI GAANNNNNNNTTGG 2 cut(s) 794, 826
AleI CACNNNNGTG 1 cut(s) 839
AloI GAACNNNNNNTCC 2 cut(s) 1001, 1033
AluBI AGCT 3 cut(s) 99, 929, 1178
AluI AGCT 3 cut(s) 99, 929, 1178
Alw21I GWGCWC 1 cut(s) 1231
Alw26I GTCTC 3 cut(s) 110, 446, 669
AlwI GGATC 1 cut(s) 921
AlwNI CAGNNNCTG 1 cut(s) 781
Ama87I CYCGRG 1 cut(s) 432
AoxI GGCC 3 cut(s) 15, 409, 1028
ApeKI GCWGC 3 cut(s) 399, 1178, 1181
ApoI RAATTY 1 cut(s) 1211
AspLEI GCGC 2 cut(s) 218, 495
AspS9I GGNCC 6 cut(s) 4, 16, 505, 976, 1029, 1039
AsuC2I CCSGG 4 cut(s) 62, 509, 667, 980
AsuHPI GGTGA 5 cut(s) 53, 271, 340, 859, 934
AsuII TTCGAA 1 cut(s) 1086
AvaI CYCGRG 1 cut(s) 432
AvaII GGWCC 4 cut(s) 4, 505, 976, 1039
BaeGI GKGCMC 2 cut(s) 750, 765
BanI GGYRCC 1 cut(s) 760
Bbv12I GWGCWC 1 cut(s) 1231
BbvI GCAGC 3 cut(s) 411, 1165, 1168
BccI CCATC 2 cut(s) 608, 812
BceAI ACGGC 2 cut(s) 323, 424
BciT130I CCWGG 1 cut(s) 227
BclI TGATCA 1 cut(s) 783
BcnI CCSGG 4 cut(s) 62, 509, 667, 980
BcoDI GTCTC 3 cut(s) 110, 446, 669
BfmI CTRYAG 1 cut(s) 94
BfoI RGCGCY 1 cut(s) 496
BglII AGATCT 1 cut(s) 288
BisI GCNGC 4 cut(s) 375, 400, 1179, 1182
BlsI GCNGC 4 cut(s) 376, 401, 1180, 1183
Bme1390I CCNGG 5 cut(s) 62, 227, 509, 667, 980
Bme18I GGWCC 4 cut(s) 4, 505, 976, 1039
BmeRI GACNNNNNGTC 1 cut(s) 469
BmeT110I CYCGRG 1 cut(s) 432
BmgT120I GGNCC 6 cut(s) 4, 16, 505, 976, 1029, 1039
BmiI GGNNCC 5 cut(s) 6, 88, 646, 762, 977
BmrFI CCNGG 5 cut(s) 62, 227, 509, 667, 980
BmrI ACTGGG 1 cut(s) 759
BmsI GCATC 1 cut(s) 361
BmuI ACTGGG 1 cut(s) 759
BpmI CTGGAG 2 cut(s) 469, 542
Bpu14I TTCGAA 1 cut(s) 1086
BpuEI CTTGAG 1 cut(s) 704
BpuMI CCSGG 4 cut(s) 62, 509, 667, 980
BsaBI GATNNNNATC 1 cut(s) 912
BsaHI GRCGYC 2 cut(s) 336, 455
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 5 cut(s) 37, 225, 226, 558, 951
BsaWI WCCGGW 2 cut(s) 78, 281
BsaXI ACNNNNNCTCC 2 cut(s) 1001, 1031
Bsc4I CCNNNNNNNGG 7 cut(s) 13, 226, 502, 606, 654, 724, 985
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 2 cut(s) 211, 765
Bse8I GATNNNNATC 1 cut(s) 912
BseBI CCWGG 1 cut(s) 227
BseDI CCNNGG 5 cut(s) 37, 225, 226, 558, 951
BseGI GGATG 2 cut(s) 207, 619
BseJI GATNNNNATC 1 cut(s) 912
BseLI CCNNNNNNNGG 7 cut(s) 13, 226, 502, 606, 654, 724, 985
BseNI ACTGG 2 cut(s) 211, 765
BseRI GAGGAG 4 cut(s) 257, 283, 286, 308
BseSI GKGCMC 2 cut(s) 750, 765
BseXI GCAGC 3 cut(s) 411, 1165, 1168
BseYI CCCAGC 1 cut(s) 600
BsgI GTGCAG 1 cut(s) 908
Bsh1236I CGCG 2 cut(s) 24, 39
Bsh1285I CGRYCG 1 cut(s) 256
BshFI GGCC 3 cut(s) 17, 411, 1030
BshNI GGYRCC 1 cut(s) 760
BsiEI CGRYCG 1 cut(s) 256
BsiHKAI GWGCWC 1 cut(s) 1231
BsiHKCI CYCGRG 1 cut(s) 432
BsiSI CCGG 8 cut(s) 61, 79, 282, 458, 508, 666, 872, 979
BslFI GGGAC 3 cut(s) 583, 989, 1211
BslI CCNNNNNNNGG 7 cut(s) 13, 226, 502, 606, 654, 724, 985
BsmAI GTCTC 3 cut(s) 110, 446, 669
BsmBI CGTCTC 2 cut(s) 446, 669
BsmFI GGGAC 3 cut(s) 583, 989, 1211
BsnI GGCC 3 cut(s) 17, 411, 1030
Bso31I GGTCTC 1 cut(s) 110
BsoBI CYCGRG 1 cut(s) 432
Bsp119I TTCGAA 1 cut(s) 1086
Bsp1286I GDGCHC 3 cut(s) 750, 765, 1231
Bsp143I GATC 5 cut(s) 54, 288, 783, 913, 1137
BspANI GGCC 3 cut(s) 17, 411, 1030
BspFNI CGCG 2 cut(s) 24, 39
BspLI GGNNCC 5 cut(s) 6, 88, 646, 762, 977
BspPI GGATC 1 cut(s) 921
BspT104I TTCGAA 1 cut(s) 1086
BspT107I GGYRCC 1 cut(s) 760
BspTNI GGTCTC 1 cut(s) 110
BsrBI CCGCTC 2 cut(s) 10, 129
BsrFI RCCGGY 1 cut(s) 457
BsrI ACTGG 2 cut(s) 211, 765
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 5 cut(s) 37, 225, 226, 558, 951
BssMI GATC 5 cut(s) 54, 288, 783, 913, 1137
BssNI GRCGYC 2 cut(s) 336, 455
Bst2UI CCWGG 1 cut(s) 227
Bst4CI ACNGT 2 cut(s) 34, 886
Bst6I CTCTTC 2 cut(s) 570, 623
BstACI GRCGYC 2 cut(s) 336, 455
BstBI TTCGAA 1 cut(s) 1086
BstC8I GCNNGC 4 cut(s) 220, 260, 379, 491
BstDSI CCRYGG 1 cut(s) 37
BstEII GGTNACC 1 cut(s) 41
BstF5I GGATG 2 cut(s) 207, 619
BstFNI CGCG 2 cut(s) 24, 39
BstH2I RGCGCY 1 cut(s) 496
BstHHI GCGC 2 cut(s) 218, 495
BstKTI GATC 5 cut(s) 57, 291, 786, 916, 1140
BstMAI GTCTC 3 cut(s) 110, 446, 669
BstMBI GATC 5 cut(s) 54, 288, 783, 913, 1137
BstMCI CGRYCG 1 cut(s) 256
BstMWI GCNNNNNNNGC 6 cut(s) 105, 119, 383, 408, 712, 962
BstNI CCWGG 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 472
BstPI GGTNACC 1 cut(s) 41
BstSCI CCNGG 5 cut(s) 60, 225, 507, 665, 978
BstSFI CTRYAG 1 cut(s) 94
BstSLI GKGCMC 2 cut(s) 750, 765
BstUI CGCG 2 cut(s) 24, 39
BstV1I GCAGC 3 cut(s) 411, 1165, 1168
BstX2I RGATCY 1 cut(s) 288
BstXI CCANNNNNNTGG 1 cut(s) 757
BstYI RGATCY 1 cut(s) 288
BsuRI GGCC 3 cut(s) 17, 411, 1030
BtgI CCRYGG 1 cut(s) 37
BtsCI GGATG 2 cut(s) 207, 619
BtsI GCAGTG 1 cut(s) 1130
BtsIMutI CAGTG 4 cut(s) 218, 772, 834, 1130
Cac8I GCNNGC 4 cut(s) 220, 260, 379, 491
CaiI CAGNNNCTG 1 cut(s) 781
CfoI GCGC 2 cut(s) 218, 495
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 6 cut(s) 4, 16, 505, 976, 1029, 1039
Cfr42I CCGCGG 1 cut(s) 40
CseI GACGC 4 cut(s) 344, 428, 463, 787
CviAII CATG 4 cut(s) 469, 661, 1043, 1078
DpnI GATC 5 cut(s) 56, 290, 785, 915, 1139
DpnII GATC 5 cut(s) 54, 288, 783, 913, 1137
DrdI GACNNNNNNGTC 2 cut(s) 32, 56
DriI GACNNNNNGTC 1 cut(s) 469
DseDI GACNNNNNNGTC 2 cut(s) 32, 56
EaeI YGGCCR 1 cut(s) 409
Eam1104I CTCTTC 2 cut(s) 570, 623
Eam1105I GACNNNNNGTC 1 cut(s) 469
EarI CTCTTC 2 cut(s) 570, 623
EciI GGCGGA 1 cut(s) 980
Eco31I GGTCTC 1 cut(s) 110
Eco47I GGWCC 4 cut(s) 4, 505, 976, 1039
Eco88I CYCGRG 1 cut(s) 432
Eco91I GGTNACC 1 cut(s) 41
EcoO65I GGTNACC 1 cut(s) 41
EcoRII CCWGG 1 cut(s) 225
Esp3I CGTCTC 2 cut(s) 446, 669
FaeI CATG 4 cut(s) 472, 664, 1046, 1081
FaqI GGGAC 3 cut(s) 583, 989, 1211
FatI CATG 4 cut(s) 468, 660, 1042, 1077
FauI CCCGC 2 cut(s) 15, 227
FbaI TGATCA 1 cut(s) 783
Fnu4HI GCNGC 4 cut(s) 375, 400, 1179, 1182
FokI GGATG 2 cut(s) 194, 626
Fsp4HI GCNGC 4 cut(s) 375, 400, 1179, 1182
GlaI GCGC 2 cut(s) 217, 494
GluI GCNGC 4 cut(s) 375, 400, 1179, 1182
GsaI CCCAGC 1 cut(s) 604
GsuI CTGGAG 2 cut(s) 469, 542
HaeII RGCGCY 1 cut(s) 496
HaeIII GGCC 3 cut(s) 17, 411, 1030
HapII CCGG 8 cut(s) 61, 79, 282, 458, 508, 666, 872, 979
HgaI GACGC 4 cut(s) 344, 428, 463, 787
HhaI GCGC 2 cut(s) 218, 495
Hin1I GRCGYC 2 cut(s) 336, 455
Hin1II CATG 4 cut(s) 472, 664, 1046, 1081
Hin6I GCGC 2 cut(s) 216, 493
HinP1I GCGC 2 cut(s) 216, 493
HincII GTYRAC 2 cut(s) 67, 178
HindII GTYRAC 2 cut(s) 67, 178
HinfI GANTC 6 cut(s) 231, 302, 428, 596, 680, 1103
HpaII CCGG 8 cut(s) 61, 79, 282, 458, 508, 666, 872, 979
HphI GGTGA 5 cut(s) 53, 271, 340, 859, 934
Hpy166II GTNNAC 4 cut(s) 67, 178, 343, 463
Hpy188I TCNGA 6 cut(s) 91, 301, 427, 649, 674, 777
Hpy188III TCNNGA 6 cut(s) 451, 787, 1144, 1169, 1224, 1236
Hpy8I GTNNAC 4 cut(s) 67, 178, 343, 463
Hpy99I CGWCG 5 cut(s) 74, 338, 422, 568, 653
HpyAV CCTTC 8 cut(s) 496, 604, 734, 796, 838, 955, 1000, 1042
HpyCH4III ACNGT 2 cut(s) 34, 886
HpyCH4IV ACGT 1 cut(s) 174
HpyCH4V TGCA 3 cut(s) 715, 889, 1184
HpyF10VI GCNNNNNNNGC 6 cut(s) 105, 119, 383, 408, 712, 962
HpySE526I ACGT 1 cut(s) 174
Hsp92I GRCGYC 2 cut(s) 336, 455
Hsp92II CATG 4 cut(s) 472, 664, 1046, 1081
HspAI GCGC 2 cut(s) 216, 493
Ksp22I TGATCA 1 cut(s) 783
KspI CCGCGG 1 cut(s) 40
Kzo9I GATC 5 cut(s) 54, 288, 783, 913, 1137
LmnI GCTCC 3 cut(s) 92, 134, 488
Lsp1109I GCAGC 3 cut(s) 411, 1165, 1168
LweI GCATC 1 cut(s) 361
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 5 cut(s) 41, 241, 686, 880, 922
MalI GATC 5 cut(s) 56, 290, 785, 915, 1139
MbiI CCGCTC 2 cut(s) 10, 129
MboI GATC 5 cut(s) 54, 288, 783, 913, 1137
MboII GAAGA 7 cut(s) 587, 640, 827, 904, 1100, 1147, 1220
MflI RGATCY 1 cut(s) 288
MhlI GDGCHC 3 cut(s) 750, 765, 1231
MluCI AATT 4 cut(s) 710, 732, 753, 1211
MlyI GAGTC 3 cut(s) 296, 605, 1112
MmeI TCCRAC 3 cut(s) 114, 324, 672
MslI CAYNNNNRTG 1 cut(s) 839
MspA1I CMGCKG 1 cut(s) 39
MspI CCGG 8 cut(s) 61, 79, 282, 458, 508, 666, 872, 979
MspR9I CCNGG 5 cut(s) 62, 227, 509, 667, 980
MvaI CCWGG 1 cut(s) 227
MvnI CGCG 2 cut(s) 24, 39
MwoI GCNNNNNNNGC 6 cut(s) 105, 119, 383, 408, 712, 962
NciI CCSGG 4 cut(s) 62, 509, 667, 980
NdeII GATC 5 cut(s) 54, 288, 783, 913, 1137
NlaIII CATG 4 cut(s) 472, 664, 1046, 1081
NlaIV GGNNCC 5 cut(s) 6, 88, 646, 762, 977
NmeAIII GCCGAG 2 cut(s) 539, 932
NmuCI GTSAC 4 cut(s) 41, 241, 880, 922
NspI RCATGY 1 cut(s) 472
NspV TTCGAA 1 cut(s) 1086
OliI CACNNNNGTG 1 cut(s) 839
PasI CCCWGGG 1 cut(s) 226
PciI ACATGT 1 cut(s) 468
PcsI WCGNNNNNNNCGW 3 cut(s) 54, 414, 785
PfeI GAWTC 3 cut(s) 231, 428, 680
PflFI GACNNNGTC 1 cut(s) 338
PkrI GCNGC 4 cut(s) 376, 401, 1180, 1183
PleI GAGTC 3 cut(s) 296, 604, 1111
PpsI GAGTC 3 cut(s) 296, 604, 1111
PscI ACATGT 1 cut(s) 468
Psp6I CCWGG 1 cut(s) 225
PspEI GGTNACC 1 cut(s) 41
PspFI CCCAGC 1 cut(s) 600
PspGI CCWGG 1 cut(s) 225
PspN4I GGNNCC 5 cut(s) 6, 88, 646, 762, 977
PspPI GGNCC 6 cut(s) 4, 16, 505, 976, 1029, 1039
PstNI CAGNNNCTG 1 cut(s) 781
PsuI RGATCY 1 cut(s) 288
PsyI GACNNNGTC 1 cut(s) 338
RseI CAYNNNNRTG 1 cut(s) 839
SacII CCGCGG 1 cut(s) 40
SatI GCNGC 4 cut(s) 375, 400, 1179, 1182
Sau3AI GATC 5 cut(s) 54, 288, 783, 913, 1137
Sau96I GGNCC 6 cut(s) 4, 16, 505, 976, 1029, 1039
SchI GAGTC 3 cut(s) 296, 605, 1112
ScrFI CCNGG 5 cut(s) 62, 227, 509, 667, 980
SduI GDGCHC 3 cut(s) 750, 765, 1231
SfaNI GCATC 1 cut(s) 361
SfcI CTRYAG 1 cut(s) 94
Sfr303I CCGCGG 1 cut(s) 40
SfuI TTCGAA 1 cut(s) 1086
SgrAI CRCCGGYG 1 cut(s) 457
SgrBI CCGCGG 1 cut(s) 40
SinI GGWCC 4 cut(s) 4, 505, 976, 1039
SmiMI CAYNNNNRTG 1 cut(s) 839
SmlI CTYRAG 1 cut(s) 719
SmoI CTYRAG 1 cut(s) 719
Sse9I AATT 4 cut(s) 710, 732, 753, 1211
StyD4I CCNGG 5 cut(s) 60, 225, 507, 665, 978
TaaI ACNGT 2 cut(s) 34, 886
TaiI ACGT 1 cut(s) 177
TaqI TCGA 7 cut(s) 48, 156, 270, 369, 450, 1086, 1145
TasI AATT 4 cut(s) 710, 732, 753, 1211
TauI GCSGC 1 cut(s) 377
TfiI GAWTC 3 cut(s) 231, 428, 680
TscAI CASTG 4 cut(s) 218, 772, 841, 1130
TseFI GTSAC 4 cut(s) 41, 241, 880, 922
TseI GCWGC 3 cut(s) 399, 1178, 1181
Tsp45I GTSAC 4 cut(s) 41, 241, 880, 922
TspDTI ATGAA 2 cut(s) 872, 1066
TspGWI ACGGA 1 cut(s) 229
TspRI CASTG 4 cut(s) 218, 772, 841, 1130
Tth111I GACNNNGTC 1 cut(s) 338
VpaK11BI GGWCC 4 cut(s) 4, 505, 976, 1039
XapI RAATTY 1 cut(s) 1211
XceI RCATGY 1 cut(s) 472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.