MD13G1196100.v1.1

RNA pol II accessory factor, Cdc73 family, C-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0011953
Physical Location & Seq
Forward (+)
17062951 .. 17065483
2533 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1196100.v1.1.491

Sequence Viewer

Length: 1239 bp
ATGGACCCGCTCTCCACCCTCCGCGACTTCACAATCCGCGGCGAGCTCGACAAGATCGTCCGGGTCAACGACGAGTTCCGGTTCGGTTCCGAGTACAGCTTCCCCTGCCACGCCGAGACCGCCTACCGCTCCAAGCAAGGCAATCTCTACACCCTCGAAACCCTCCTTTATTACGTCAACAACCACCAAATCAAGCACACCGACTACATCCAGTGCGCCCGCACCCAGGGGATCCCCTCCGTCACTTTCCCCGACCGCAAGCCCCTCCTCGACTACCTCACCGGAAAGATCTCTTCCTCCGACTCCATCGAGTTCATCCTCCCTCCCCAGAACGACGCCATACACCACCCCAAAATCCCTACCGCCCTCGATTCCGCCAGCAACGGTAACCACATCAGCAACGACAACGGCGATTACGCCGCTTTGGATTCTAGGGTTTTCACTCAAATTGAGACGCCGGTGGACTACATGTCTTTGATTTGCTCCAGCGAGCGGCCGTTGAAGGACCGCGAGGGGTTGCTGGAGTGTAAAGGCAGGAACTTTTACGCTGTTTTGACTTCGGCGACGAAGAGGGAAGAGGAACGGCAGCGTATCGAGTCGCAGCAGAGGAAAGACGGGCTGGTGGCGAAGAGCAGGCTAATGGGTTCGGACGAGAGGGGCTTGACCGGGTTCGGAGATGAATCGGGTTACGACCCGAATACGAAGCCCAAATTGCACTTGAAAGGAGGAAAAGTTGGGGAAGGGGTGCCCATAATTTTGGTGCCCAGTGCGTTTCAGACGCTGATTACGATTTACAATGTGAAGGAGTTTTTGGAAGATGGGGTTTATATACCCACTGATGTGAAGGTGAAGCAGATGAATGGGGCGAAGCCGGACTGCGTGACGGTGCAGAAGAAGTTTAGTAGGGATAGGGATCGGGTGGTGACGGCTTATGAAGTTAGGGATAAGCCCTCAGCATTGAAGGCGGAGGATTGGGACCGTGTTGTGGCGGTTTTTGTGTTGGGGAAGGAATGGCAGTTCAAGGATTGGCCTTTCAAGGACCATGTTGAGATTTTCAATAAGATTATGGGCTTTTTCATGCGGTTCGAAGATGATAGCGTGGAGTCGGCAAAGATTGTGAAGCAGTGGAATGTGAAGATCATCTCAATTAGCAAAAATAAACGACATCAAGATAGAGCTGCGGCATTGGAGGTGTGGGACAGATTAGAAGAATTTGTGCGGTCAAGATCACATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000428 GO:0000988 GO:0000989 GO:0000993 GO:0001076 GO:0001098 GO:0001099 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016071 GO:0016569 GO:0016570 GO:0016571 GO:0016591 GO:0016593 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0030880 GO:0031123 GO:0031124 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034402 GO:0034622 GO:0034641 GO:0034968 GO:0036211 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0055029 GO:0060255 GO:0061458 GO:0061695 GO:0065003 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0140110 GO:1901360 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC73_C CDC73_N

Protein Analysis

413

Amino Acids

47.16

Weight (kDa)

6.81

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC73_N PF16050 2 - 104 4.5e-20 Paf1 complex subunit CDC73 N-terminal
CDC73_C PF05179 249 - 405 4.2e-51 RNA pol II accessory factor, Cdc73 family, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011953)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22590
fragaria_vesca FvH4_4g16100 FvH4_4g16100
malus_domestica MD13G1196100.v1.1 MD16G1196600.v1.1
prunus_persica Prupe.1G016800_v2.0.a1
pyrus_communis pycom13g16820 pycom16g16540
rosa_chinensis RchiOBHm_Chr4g0415641
rosa_laevigata RLG00000008053
rosa_multiflora Rmu_sc0001194.1_g000007 Rmu_sc0004599.1_g000013
rosa_roxburghii Rroxscaffold_5G00359440
rosa_rugosa Rorug04G0136100
rosa_samantha Rh4AG196800 Rh4BG195400 Rh4CG207600 Rh4DG194700
rosa_wichuraiana Rw4G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 56
AccB1I GGYRCC 2 cut(s) 745, 760
AccBSI CCGCTC 3 cut(s) 10, 129, 493
AccII CGCG 3 cut(s) 24, 39, 510
AclWI GGATC 3 cut(s) 226, 239, 921
AcoI YGGCCR 1 cut(s) 494
AcsI RAATTY 1 cut(s) 1211
AcyI GRCGYC 2 cut(s) 336, 455
AfaI GTAC 1 cut(s) 95
AfiI CCNNNNNNNGG 3 cut(s) 226, 492, 985
AflIII ACRYGT 1 cut(s) 468
AgsI TTSAA 6 cut(s) 502, 721, 961, 1021, 1036, 1057
AhdI GACNNNNNGTC 1 cut(s) 469
AjnI CCWGG 1 cut(s) 225
AjuI GAANNNNNNNTTGG 2 cut(s) 794, 826
AleI CACNNNNGTG 1 cut(s) 839
AloI GAACNNNNNNTCC 2 cut(s) 1001, 1033
AluBI AGCT 3 cut(s) 46, 99, 1178
AluI AGCT 3 cut(s) 46, 99, 1178
Alw21I GWGCWC 1 cut(s) 48
Alw26I GTCTC 2 cut(s) 110, 446
AlwI GGATC 3 cut(s) 226, 239, 921
AlwNI CAGNNNCTG 1 cut(s) 781
AoxI GGCC 2 cut(s) 494, 1028
ApeKI GCWGC 3 cut(s) 586, 601, 1178
ApoI RAATTY 1 cut(s) 1211
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 4 cut(s) 4, 505, 976, 1039
AsuC2I CCSGG 2 cut(s) 62, 667
AsuHPI GGTGA 3 cut(s) 271, 859, 934
AsuII TTCGAA 1 cut(s) 1086
AvaII GGWCC 4 cut(s) 4, 505, 976, 1039
BaeGI GKGCMC 2 cut(s) 750, 765
BamHI GGATCC 1 cut(s) 231
BanI GGYRCC 2 cut(s) 745, 760
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 48
BbvCI CCTCAGC 1 cut(s) 952
BbvI GCAGC 3 cut(s) 598, 613, 1165
BccI CCATC 2 cut(s) 314, 812
BceAI ACGGC 4 cut(s) 424, 481, 599, 942
BciT130I CCWGG 1 cut(s) 227
BcnI CCSGG 2 cut(s) 62, 667
BcoDI GTCTC 2 cut(s) 110, 446
BfaI CTAG 1 cut(s) 432
BglII AGATCT 1 cut(s) 288
BisI GCNGC 7 cut(s) 40, 420, 494, 587, 602, 1179, 1182
BlsI GCNGC 7 cut(s) 41, 421, 495, 588, 603, 1180, 1183
Bme1390I CCNGG 3 cut(s) 62, 227, 667
Bme18I GGWCC 4 cut(s) 4, 505, 976, 1039
BmeRI GACNNNNNGTC 1 cut(s) 469
BmgT120I GGNCC 4 cut(s) 4, 505, 976, 1039
BmiI GGNNCC 6 cut(s) 6, 88, 233, 747, 762, 977
BmrFI CCNGG 3 cut(s) 62, 227, 667
BmrI ACTGGG 1 cut(s) 759
BmuI ACTGGG 1 cut(s) 759
BpmI CTGGAG 2 cut(s) 469, 542
Bpu10I CCTNAGC 1 cut(s) 952
Bpu14I TTCGAA 1 cut(s) 1086
BpuMI CCSGG 2 cut(s) 62, 667
BsaBI GATNNNNATC 1 cut(s) 912
BsaHI GRCGYC 2 cut(s) 336, 455
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 3 cut(s) 37, 225, 226
BsaWI WCCGGW 2 cut(s) 78, 281
BsaXI ACNNNNNCTCC 3 cut(s) 26, 717, 747
Bsc4I CCNNNNNNNGG 3 cut(s) 226, 492, 985
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 2 cut(s) 211, 765
Bse8I GATNNNNATC 1 cut(s) 912
BseBI CCWGG 1 cut(s) 227
BseDI CCNNGG 3 cut(s) 37, 225, 226
BseGI GGATG 2 cut(s) 207, 315
BseJI GATNNNNATC 1 cut(s) 912
BseLI CCNNNNNNNGG 3 cut(s) 226, 492, 985
BseMII CTCAG 1 cut(s) 966
BseNI ACTGG 2 cut(s) 211, 765
BseRI GAGGAG 1 cut(s) 257
BseSI GKGCMC 2 cut(s) 750, 765
BseX3I CGGCCG 1 cut(s) 494
BseXI GCAGC 3 cut(s) 598, 613, 1165
BsgI GTGCAG 1 cut(s) 908
Bsh1236I CGCG 3 cut(s) 24, 39, 510
Bsh1285I CGRYCG 2 cut(s) 256, 497
BshFI GGCC 2 cut(s) 496, 1030
BshNI GGYRCC 2 cut(s) 745, 760
BsiEI CGRYCG 2 cut(s) 256, 497
BsiHKAI GWGCWC 1 cut(s) 48
BsiSI CCGG 6 cut(s) 61, 79, 282, 458, 666, 872
BslFI GGGAC 2 cut(s) 989, 1211
BslI CCNNNNNNNGG 3 cut(s) 226, 492, 985
BsmAI GTCTC 2 cut(s) 110, 446
BsmBI CGTCTC 1 cut(s) 446
BsmFI GGGAC 2 cut(s) 989, 1211
BsnI GGCC 2 cut(s) 496, 1030
Bso31I GGTCTC 1 cut(s) 110
Bsp119I TTCGAA 1 cut(s) 1086
Bsp1286I GDGCHC 3 cut(s) 48, 750, 765
Bsp143I GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
BspANI GGCC 2 cut(s) 496, 1030
BspCNI CTCAG 1 cut(s) 965
BspFNI CGCG 3 cut(s) 24, 39, 510
BspLI GGNNCC 6 cut(s) 6, 88, 233, 747, 762, 977
BspPI GGATC 3 cut(s) 226, 239, 921
BspQI GCTCTTC 1 cut(s) 623
BspT104I TTCGAA 1 cut(s) 1086
BspT107I GGYRCC 2 cut(s) 745, 760
BspTNI GGTCTC 1 cut(s) 110
BsrBI CCGCTC 3 cut(s) 10, 129, 493
BsrFI RCCGGY 1 cut(s) 457
BsrI ACTGG 2 cut(s) 211, 765
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 3 cut(s) 37, 225, 226
BssMI GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
BssNI GRCGYC 2 cut(s) 336, 455
Bst2UI CCWGG 1 cut(s) 227
Bst4CI ACNGT 3 cut(s) 386, 886, 980
Bst6I CTCTTC 4 cut(s) 298, 563, 570, 623
BstACI GRCGYC 2 cut(s) 336, 455
BstBI TTCGAA 1 cut(s) 1086
BstC8I GCNNGC 6 cut(s) 44, 220, 260, 379, 491, 635
BstDEI CTNAG 1 cut(s) 952
BstDSI CCRYGG 1 cut(s) 37
BstEII GGTNACC 1 cut(s) 386
BstF5I GGATG 2 cut(s) 207, 315
BstFNI CGCG 3 cut(s) 24, 39, 510
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 6 cut(s) 57, 234, 291, 916, 1140, 1229
BstMAI GTCTC 2 cut(s) 110, 446
BstMBI GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
BstMCI CGRYCG 2 cut(s) 256, 497
BstMWI GCNNNNNNNGC 4 cut(s) 105, 119, 712, 962
BstNI CCWGG 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 472
BstPI GGTNACC 1 cut(s) 386
BstSCI CCNGG 3 cut(s) 60, 225, 665
BstSLI GKGCMC 2 cut(s) 750, 765
BstUI CGCG 3 cut(s) 24, 39, 510
BstV1I GCAGC 3 cut(s) 598, 613, 1165
BstX2I RGATCY 2 cut(s) 231, 288
BstXI CCANNNNNNTGG 1 cut(s) 757
BstYI RGATCY 2 cut(s) 231, 288
BstZI CGGCCG 1 cut(s) 494
BsuRI GGCC 2 cut(s) 496, 1030
BtgI CCRYGG 1 cut(s) 37
BtsCI GGATG 2 cut(s) 207, 315
BtsI GCAGTG 1 cut(s) 1130
BtsIMutI CAGTG 4 cut(s) 218, 772, 834, 1130
Cac8I GCNNGC 6 cut(s) 44, 220, 260, 379, 491, 635
CaiI CAGNNNCTG 1 cut(s) 781
CfoI GCGC 1 cut(s) 218
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 4 cut(s) 4, 505, 976, 1039
Cfr42I CCGCGG 1 cut(s) 40
CseI GACGC 3 cut(s) 344, 463, 787
Csp6I GTAC 1 cut(s) 94
CviAII CATG 3 cut(s) 469, 1043, 1078
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 1 cut(s) 952
DpnI GATC 6 cut(s) 56, 233, 290, 915, 1139, 1228
DpnII GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
DrdI GACNNNNNNGTC 1 cut(s) 56
DriI GACNNNNNGTC 1 cut(s) 469
DseDI GACNNNNNNGTC 1 cut(s) 56
EaeI YGGCCR 1 cut(s) 494
EagI CGGCCG 1 cut(s) 494
Eam1104I CTCTTC 4 cut(s) 298, 563, 570, 623
Eam1105I GACNNNNNGTC 1 cut(s) 469
EarI CTCTTC 4 cut(s) 298, 563, 570, 623
EciI GGCGGA 2 cut(s) 364, 980
Ecl136II GAGCTC 1 cut(s) 46
EclXI CGGCCG 1 cut(s) 494
Eco24I GRGCYC 1 cut(s) 48
Eco31I GGTCTC 1 cut(s) 110
Eco47I GGWCC 4 cut(s) 4, 505, 976, 1039
Eco52I CGGCCG 1 cut(s) 494
Eco53kI GAGCTC 1 cut(s) 46
Eco91I GGTNACC 1 cut(s) 386
EcoICRI GAGCTC 1 cut(s) 46
EcoO65I GGTNACC 1 cut(s) 386
EcoRII CCWGG 1 cut(s) 225
EcoT38I GRGCYC 1 cut(s) 48
Esp3I CGTCTC 1 cut(s) 446
FaeI CATG 3 cut(s) 472, 1046, 1081
FaiI YATR 9 cut(s) 341, 470, 752, 828, 830, 933, 1044, 1067, 1079
FaqI GGGAC 2 cut(s) 989, 1211
FatI CATG 3 cut(s) 468, 1042, 1077
FauI CCCGC 2 cut(s) 15, 227
Fnu4HI GCNGC 7 cut(s) 40, 420, 494, 587, 602, 1179, 1182
FokI GGATG 2 cut(s) 194, 302
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 7 cut(s) 40, 420, 494, 587, 602, 1179, 1182
FspBI CTAG 1 cut(s) 432
GlaI GCGC 1 cut(s) 217
GluI GCNGC 7 cut(s) 40, 420, 494, 587, 602, 1179, 1182
GsuI CTGGAG 2 cut(s) 469, 542
HaeIII GGCC 2 cut(s) 496, 1030
HapII CCGG 6 cut(s) 61, 79, 282, 458, 666, 872
HgaI GACGC 3 cut(s) 344, 463, 787
HhaI GCGC 1 cut(s) 218
Hin1I GRCGYC 2 cut(s) 336, 455
Hin1II CATG 3 cut(s) 472, 1046, 1081
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HincII GTYRAC 2 cut(s) 67, 178
HindII GTYRAC 2 cut(s) 67, 178
HinfI GANTC 6 cut(s) 302, 371, 428, 596, 680, 1103
HpaII CCGG 6 cut(s) 61, 79, 282, 458, 666, 872
HphI GGTGA 3 cut(s) 271, 859, 934
Hpy166II GTNNAC 3 cut(s) 67, 178, 463
Hpy188I TCNGA 5 cut(s) 91, 301, 649, 674, 777
Hpy188III TCNNGA 3 cut(s) 1169, 1224, 1236
Hpy8I GTNNAC 3 cut(s) 67, 178, 463
Hpy99I CGWCG 3 cut(s) 74, 338, 568
HpyAV CCTTC 6 cut(s) 496, 734, 796, 838, 955, 1000
HpyCH4III ACNGT 3 cut(s) 386, 886, 980
HpyCH4IV ACGT 1 cut(s) 174
HpyCH4V TGCA 2 cut(s) 715, 889
HpyF10VI GCNNNNNNNGC 4 cut(s) 105, 119, 712, 962
HpyF3I CTNAG 1 cut(s) 952
HpySE526I ACGT 1 cut(s) 174
Hsp92I GRCGYC 2 cut(s) 336, 455
Hsp92II CATG 3 cut(s) 472, 1046, 1081
HspAI GCGC 1 cut(s) 216
KspI CCGCGG 1 cut(s) 40
Kzo9I GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
LguI GCTCTTC 1 cut(s) 623
LmnI GCTCC 2 cut(s) 134, 488
Lsp1109I GCAGC 3 cut(s) 598, 613, 1165
MaeI CTAG 1 cut(s) 432
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 5 cut(s) 241, 386, 686, 880, 922
MalI GATC 6 cut(s) 56, 233, 290, 915, 1139, 1228
MbiI CCGCTC 3 cut(s) 10, 129, 493
MboI GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
MboII GAAGA 9 cut(s) 285, 580, 587, 640, 827, 904, 1100, 1147, 1220
MflI RGATCY 2 cut(s) 231, 288
MhlI GDGCHC 3 cut(s) 48, 750, 765
MluCI AATT 5 cut(s) 447, 710, 753, 1146, 1211
MlyI GAGTC 3 cut(s) 296, 605, 1112
MmeI TCCRAC 1 cut(s) 324
MslI CAYNNNNRTG 1 cut(s) 839
MspA1I CMGCKG 1 cut(s) 39
MspI CCGG 6 cut(s) 61, 79, 282, 458, 666, 872
MspR9I CCNGG 3 cut(s) 62, 227, 667
MvaI CCWGG 1 cut(s) 227
MvnI CGCG 3 cut(s) 24, 39, 510
MwoI GCNNNNNNNGC 4 cut(s) 105, 119, 712, 962
NciI CCSGG 2 cut(s) 62, 667
NdeII GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
NlaIII CATG 3 cut(s) 472, 1046, 1081
NlaIV GGNNCC 6 cut(s) 6, 88, 233, 747, 762, 977
NmeAIII GCCGAG 1 cut(s) 139
NmuCI GTSAC 3 cut(s) 241, 880, 922
NspI RCATGY 1 cut(s) 472
NspV TTCGAA 1 cut(s) 1086
OliI CACNNNNGTG 1 cut(s) 839
PasI CCCWGGG 1 cut(s) 226
PciI ACATGT 1 cut(s) 468
PciSI GCTCTTC 1 cut(s) 623
PcsI WCGNNNNNNNCGW 3 cut(s) 54, 408, 785
PfeI GAWTC 3 cut(s) 371, 428, 680
PkrI GCNGC 7 cut(s) 41, 421, 495, 588, 603, 1180, 1183
PleI GAGTC 3 cut(s) 296, 604, 1111
PpsI GAGTC 3 cut(s) 296, 604, 1111
PscI ACATGT 1 cut(s) 468
Psp124BI GAGCTC 1 cut(s) 48
Psp6I CCWGG 1 cut(s) 225
PspEI GGTNACC 1 cut(s) 386
PspGI CCWGG 1 cut(s) 225
PspN4I GGNNCC 6 cut(s) 6, 88, 233, 747, 762, 977
PspPI GGNCC 4 cut(s) 4, 505, 976, 1039
PstNI CAGNNNCTG 1 cut(s) 781
PsuI RGATCY 2 cut(s) 231, 288
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
RseI CAYNNNNRTG 1 cut(s) 839
SacI GAGCTC 1 cut(s) 48
SacII CCGCGG 1 cut(s) 40
SapI GCTCTTC 1 cut(s) 623
SatI GCNGC 7 cut(s) 40, 420, 494, 587, 602, 1179, 1182
Sau3AI GATC 6 cut(s) 54, 231, 288, 913, 1137, 1226
Sau96I GGNCC 4 cut(s) 4, 505, 976, 1039
SchI GAGTC 3 cut(s) 296, 605, 1112
ScrFI CCNGG 3 cut(s) 62, 227, 667
SduI GDGCHC 3 cut(s) 48, 750, 765
SetI ASST 7 cut(s) 48, 101, 177, 279, 849, 1180, 1194
Sfr303I CCGCGG 1 cut(s) 40
SfuI TTCGAA 1 cut(s) 1086
SgrAI CRCCGGYG 1 cut(s) 457
SgrBI CCGCGG 1 cut(s) 40
SinI GGWCC 4 cut(s) 4, 505, 976, 1039
SmiMI CAYNNNNRTG 1 cut(s) 839
Sse9I AATT 5 cut(s) 447, 710, 753, 1146, 1211
SspMI CTAG 1 cut(s) 432
SstI GAGCTC 1 cut(s) 48
StyD4I CCNGG 3 cut(s) 60, 225, 665
TaaI ACNGT 3 cut(s) 386, 886, 980
TaiI ACGT 1 cut(s) 177
TaqI TCGA 7 cut(s) 48, 156, 270, 309, 369, 594, 1086
TasI AATT 5 cut(s) 447, 710, 753, 1146, 1211
TatI WGTACW 1 cut(s) 93
TauI GCSGC 4 cut(s) 42, 422, 496, 1184
TfiI GAWTC 3 cut(s) 371, 428, 680
TscAI CASTG 4 cut(s) 218, 772, 841, 1130
TseFI GTSAC 3 cut(s) 241, 880, 922
TseI GCWGC 3 cut(s) 586, 601, 1178
Tsp45I GTSAC 3 cut(s) 241, 880, 922
TspDTI ATGAA 5 cut(s) 304, 693, 872, 948, 1066
TspGWI ACGGA 1 cut(s) 229
TspRI CASTG 4 cut(s) 218, 772, 841, 1130
VpaK11BI GGWCC 4 cut(s) 4, 505, 976, 1039
XapI RAATTY 1 cut(s) 1211
XceI RCATGY 1 cut(s) 472
XspI CTAG 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.