AT3G22942

Guanine nucleotide-binding protein subunit gamma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0012824
Physical Location & Seq
Forward (+)
8134077 .. 8136204
2128 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G22942.1

Sequence Viewer

Length: 303 bp
ATGGAAGCGGGTAGCTCCAATTCGTCGGGTCAGCTATCCGGGCGGGTCGTTGATACAAGAGGCAAACACAGGATTCAAGCTGAACTCAAAAGGCTTGAACAAGAAGCTCGATTCTTAGAGGAAGAGCTGGAGCAGCTTGAGAAGATGGACAATGCATCAGCATCCTGCAAAGAGTTCTTAGACAGTGTTGACAGCAAACCCGATCCTCTTCTTCCCGAAACAACAGGTCCGGTGAATGCGACATGGGATCAATGGTTCGAAGGCCCTAAAGAAGCAAAACGATGTGGCTGCTCCATTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000139 GO:0000166 GO:0001882 GO:0001883 GO:0002376 GO:0003674 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005834 GO:0005886 GO:0006464 GO:0006497 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009791 GO:0009814 GO:0009817 GO:0009845 GO:0009898 GO:0009914 GO:0009926 GO:0009987 GO:0010540 GO:0010541 GO:0010817 GO:0012505 GO:0016020 GO:0017076 GO:0018342 GO:0018345 GO:0019001 GO:0019538 GO:0019897 GO:0019898 GO:0022622 GO:0031090 GO:0031234 GO:0031984 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032588 GO:0032991 GO:0034645 GO:0035639 GO:0036094 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045087 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0090351 GO:0090696 GO:0097159 GO:0097354 GO:0097367 GO:0098542 GO:0098552 GO:0098562 GO:0098588 GO:0098791 GO:0098796 GO:0098797 GO:0099402 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1905360
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-gamma

Protein Analysis

100

Amino Acids

11.14

Weight (kDa)

4.79

Isoelectric Point (pI)

39.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-gamma PF00631 27 - 100 4e-16 GGL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012824)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22942
fragaria_vesca FvH4_4g01800
malus_domestica MD13G1202200.v1.1 MD16G1202400.v1.1
prunus_persica Prupe.1G024000_v2.0.a1 Prupe.1G024000_v2.0.a1
pyrus_communis pycom13g17560
rosa_chinensis RchiOBHm_Chr4g0388841
rosa_laevigata RLG00000010021
rosa_multiflora Rmu_sc0016023.1_g000005
rosa_roxburghii Rroxscaffold_5G00335120
rosa_rugosa Rorug03G0320300 Rorug03G0320400
rosa_samantha Rh4AG025000 Rh4BG018100 Rh4CG027900 Rh4DG018700
rosa_wichuraiana Rw4G001790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 8, 43
AclWI GGATC 2 cut(s) 197, 255
AgsI TTSAA 2 cut(s) 77, 98
AloI GAACNNNNNNTCC 2 cut(s) 239, 271
AluBI AGCT 6 cut(s) 15, 34, 80, 107, 127, 136
AluI AGCT 6 cut(s) 15, 34, 80, 107, 127, 136
AlwI GGATC 2 cut(s) 197, 255
AoxI GGCC 1 cut(s) 262
ApeKI GCWGC 2 cut(s) 133, 288
AspS9I GGNCC 2 cut(s) 227, 263
AsuC2I CCSGG 1 cut(s) 40
AsuHPI GGTGA 1 cut(s) 244
AsuII TTCGAA 1 cut(s) 258
AvaII GGWCC 1 cut(s) 227
BbvI GCAGC 2 cut(s) 145, 275
BccI CCATC 1 cut(s) 139
BcgI CGANNNNNNTGC 1 cut(s) 270
BcnI CCSGG 1 cut(s) 40
BisI GCNGC 2 cut(s) 134, 289
BlsI GCNGC 2 cut(s) 135, 290
Bme1390I CCNGG 1 cut(s) 40
Bme18I GGWCC 1 cut(s) 227
BmgT120I GGNCC 2 cut(s) 227, 263
BmrFI CCNGG 1 cut(s) 40
BmsI GCATC 2 cut(s) 164, 170
BpmI CTGGAG 1 cut(s) 149
Bpu14I TTCGAA 1 cut(s) 258
BpuEI CTTGAG 1 cut(s) 158
BpuMI CCSGG 1 cut(s) 40
BsaWI WCCGGW 1 cut(s) 229
BseGI GGATG 1 cut(s) 161
BseXI GCAGC 2 cut(s) 145, 275
BshFI GGCC 1 cut(s) 264
BsiSI CCGG 2 cut(s) 39, 230
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 1 cut(s) 264
Bsp119I TTCGAA 1 cut(s) 258
Bsp143I GATC 2 cut(s) 202, 247
BspACI CCGC 2 cut(s) 8, 43
BspANI GGCC 1 cut(s) 264
BspPI GGATC 2 cut(s) 197, 255
BspQI GCTCTTC 1 cut(s) 117
BspT104I TTCGAA 1 cut(s) 258
BssMI GATC 2 cut(s) 202, 247
Bst4CI ACNGT 1 cut(s) 185
Bst6I CTCTTC 2 cut(s) 117, 213
BstBI TTCGAA 1 cut(s) 258
BstDEI CTNAG 2 cut(s) 115, 178
BstF5I GGATG 1 cut(s) 161
BstKTI GATC 2 cut(s) 205, 250
BstMBI GATC 2 cut(s) 202, 247
BstMWI GCNNNNNNNGC 2 cut(s) 40, 133
BstSCI CCNGG 1 cut(s) 38
BstV1I GCAGC 2 cut(s) 145, 275
BsuRI GGCC 1 cut(s) 264
BtsCI GGATG 1 cut(s) 161
BtsIMutI CAGTG 1 cut(s) 190
Cfr13I GGNCC 2 cut(s) 227, 263
CviAII CATG 1 cut(s) 243
CviJI RGCY 9 cut(s) 15, 34, 80, 94, 107, 127, 136, 264, 288
CviKI_1 RGCY 9 cut(s) 15, 34, 80, 94, 107, 127, 136, 264, 288
DdeI CTNAG 2 cut(s) 115, 178
DpnI GATC 2 cut(s) 204, 249
DpnII GATC 2 cut(s) 202, 247
Eam1104I CTCTTC 2 cut(s) 117, 213
EarI CTCTTC 2 cut(s) 117, 213
Eco47I GGWCC 1 cut(s) 227
EcoO109I RGGNCCY 1 cut(s) 263
EcoT22I ATGCAT 1 cut(s) 157
FaeI CATG 1 cut(s) 246
FaiI YATR 1 cut(s) 244
FatI CATG 1 cut(s) 242
FauI CCCGC 1 cut(s) 36
Fnu4HI GCNGC 2 cut(s) 134, 289
FokI GGATG 1 cut(s) 148
Fsp4HI GCNGC 2 cut(s) 134, 289
GluI GCNGC 2 cut(s) 134, 289
GsuI CTGGAG 1 cut(s) 149
HaeIII GGCC 1 cut(s) 264
HapII CCGG 2 cut(s) 39, 230
Hin1II CATG 1 cut(s) 246
HincII GTYRAC 1 cut(s) 190
HindII GTYRAC 1 cut(s) 190
HinfI GANTC 2 cut(s) 73, 111
HpaII CCGG 2 cut(s) 39, 230
HphI GGTGA 1 cut(s) 244
Hpy166II GTNNAC 1 cut(s) 190
Hpy188III TCNNGA 1 cut(s) 215
Hpy8I GTNNAC 1 cut(s) 190
Hpy99I CGWCG 1 cut(s) 28
HpyAV CCTTC 1 cut(s) 254
HpyCH4III ACNGT 1 cut(s) 185
HpyCH4V TGCA 2 cut(s) 155, 168
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 133
HpyF3I CTNAG 2 cut(s) 115, 178
Hsp92II CATG 1 cut(s) 246
Kzo9I GATC 2 cut(s) 202, 247
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 3 cut(s) 20, 130, 296
LpnPI CCDG 6 cut(s) 52, 55, 113, 178, 210, 243
Lsp1109I GCAGC 2 cut(s) 145, 275
LweI GCATC 2 cut(s) 164, 170
MalI GATC 2 cut(s) 204, 249
MboI GATC 2 cut(s) 202, 247
MboII GAAGA 4 cut(s) 134, 154, 200, 203
MluCI AATT 1 cut(s) 19
MnlI CCTC 3 cut(s) 53, 112, 216
Mph1103I ATGCAT 1 cut(s) 157
MspI CCGG 2 cut(s) 39, 230
MspR9I CCNGG 1 cut(s) 40
Mva1269I GAATGC 1 cut(s) 241
MwoI GCNNNNNNNGC 2 cut(s) 40, 133
NciI CCSGG 1 cut(s) 40
NdeII GATC 2 cut(s) 202, 247
NlaIII CATG 1 cut(s) 246
NsiI ATGCAT 1 cut(s) 157
NspV TTCGAA 1 cut(s) 258
PciSI GCTCTTC 1 cut(s) 117
PctI GAATGC 1 cut(s) 241
PfeI GAWTC 2 cut(s) 73, 111
PkrI GCNGC 2 cut(s) 135, 290
PspPI GGNCC 2 cut(s) 227, 263
SapI GCTCTTC 1 cut(s) 117
SatI GCNGC 2 cut(s) 134, 289
Sau3AI GATC 2 cut(s) 202, 247
Sau96I GGNCC 2 cut(s) 227, 263
ScrFI CCNGG 1 cut(s) 40
SetI ASST 7 cut(s) 17, 36, 82, 109, 129, 138, 229
SfaNI GCATC 2 cut(s) 164, 170
SfuI TTCGAA 1 cut(s) 258
SinI GGWCC 1 cut(s) 227
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
Sse9I AATT 1 cut(s) 19
SsiI CCGC 2 cut(s) 8, 43
StyD4I CCNGG 1 cut(s) 38
TaaI ACNGT 1 cut(s) 185
TaqI TCGA 2 cut(s) 109, 258
TasI AATT 1 cut(s) 19
TfiI GAWTC 2 cut(s) 73, 111
TscAI CASTG 1 cut(s) 190
TseI GCWGC 2 cut(s) 133, 288
TspRI CASTG 1 cut(s) 190
VpaK11BI GGWCC 1 cut(s) 227
Zsp2I ATGCAT 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.