Prupe.1G024000_v2.0.a1

Guanine nucleotide-binding protein subunit gamma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012824
Physical Location & Seq
Forward (+)
1680766 .. 1684414
3649 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G024000.1

Sequence Viewer

Length: 318 bp
ATGCAATCGGATGGGTCAGAATCAGTAAGCCCAACAACCCAAAGGCTACAGTCTTTGTCAGCCGCTGATACCAGAGGGAAGCATAGGATACAGGCCGAGTTGAAACGGCTCGAGCAAGAAGCTAGATTCTTAGAGGAAGAGTTGGAACAACTGGAAAAGATGGACAAGGCCTCAGCTGCATGCAAGGAAATACTGAACAATGCAGAAACGAGGCCTGATCCATTACTCCCAGTAACACATGGCCCTCTTAATCCATTCTGGGATCGATGGTTTGAAGGCCCCAAAGATTCAAAAGGTTGCAGATGCTGGATACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04011 map04011
Pfam Domains
Protein Families
G-gamma

Protein Analysis

106

Amino Acids

11.99

Weight (kDa)

5.41

Isoelectric Point (pI)

62.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012824)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22942
fragaria_vesca FvH4_4g01800
malus_domestica MD13G1202200.v1.1 MD16G1202400.v1.1
prunus_persica Prupe.1G024000_v2.0.a1 Prupe.1G024000_v2.0.a1
pyrus_communis pycom13g17560
rosa_chinensis RchiOBHm_Chr4g0388841
rosa_laevigata RLG00000010021
rosa_multiflora Rmu_sc0016023.1_g000005
rosa_roxburghii Rroxscaffold_5G00335120
rosa_rugosa Rorug03G0320300 Rorug03G0320400
rosa_samantha Rh4AG025000 Rh4BG018100 Rh4CG027900 Rh4DG018700
rosa_wichuraiana Rw4G001790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 63
AclWI GGATC 2 cut(s) 212, 270
AgsI TTSAA 3 cut(s) 103, 275, 291
AluBI AGCT 2 cut(s) 122, 176
AluI AGCT 2 cut(s) 122, 176
AlwI GGATC 2 cut(s) 212, 270
AlwNI CAGNNNCTG 2 cut(s) 65, 306
Ama87I CYCGRG 1 cut(s) 110
AoxI GGCC 5 cut(s) 93, 168, 212, 241, 277
ApeKI GCWGC 1 cut(s) 176
AspS9I GGNCC 2 cut(s) 242, 278
AvaI CYCGRG 1 cut(s) 110
BbvCI CCTCAGC 1 cut(s) 172
BbvI GCAGC 1 cut(s) 163
BccI CCATC 3 cut(s) 5, 154, 261
BceAI ACGGC 1 cut(s) 122
BciVI GTATCC 2 cut(s) 81, 303
BfaI CTAG 1 cut(s) 123
BfmI CTRYAG 1 cut(s) 47
BfuI GTATCC 2 cut(s) 81, 303
BisI GCNGC 2 cut(s) 63, 177
BlsI GCNGC 2 cut(s) 64, 178
BmeT110I CYCGRG 1 cut(s) 110
BmgT120I GGNCC 2 cut(s) 242, 278
BmiI GGNNCC 1 cut(s) 280
BmrI ACTGGG 1 cut(s) 224
BmsI GCATC 1 cut(s) 293
BmuI ACTGGG 1 cut(s) 224
Bpu10I CCTNAGC 1 cut(s) 172
Bsa29I ATCGAT 1 cut(s) 265
Bse1I ACTGG 2 cut(s) 156, 230
BseCI ATCGAT 1 cut(s) 265
BseGI GGATG 1 cut(s) 16
BseMII CTCAG 1 cut(s) 186
BseNI ACTGG 2 cut(s) 156, 230
BseXI GCAGC 1 cut(s) 163
BshFI GGCC 5 cut(s) 95, 170, 214, 243, 279
BshVI ATCGAT 1 cut(s) 265
BsiHKCI CYCGRG 1 cut(s) 110
BsnI GGCC 5 cut(s) 95, 170, 214, 243, 279
BsoBI CYCGRG 1 cut(s) 110
Bsp143I GATC 2 cut(s) 217, 262
BspACI CCGC 1 cut(s) 63
BspANI GGCC 5 cut(s) 95, 170, 214, 243, 279
BspCNI CTCAG 1 cut(s) 185
BspDI ATCGAT 1 cut(s) 265
BspLI GGNNCC 1 cut(s) 280
BspPI GGATC 2 cut(s) 212, 270
BsrI ACTGG 2 cut(s) 156, 230
BssMI GATC 2 cut(s) 217, 262
Bst4CI ACNGT 2 cut(s) 51, 315
Bst6I CTCTTC 1 cut(s) 132
BstC8I GCNNGC 1 cut(s) 181
BstDEI CTNAG 2 cut(s) 130, 172
BstF5I GGATG 1 cut(s) 16
BstKTI GATC 2 cut(s) 220, 265
BstMBI GATC 2 cut(s) 217, 262
BstMWI GCNNNNNNNGC 1 cut(s) 176
BstNSI RCATGY 1 cut(s) 183
BstSFI CTRYAG 1 cut(s) 47
BstV1I GCAGC 1 cut(s) 163
Bsu15I ATCGAT 1 cut(s) 265
BsuI GTATCC 2 cut(s) 81, 303
BsuRI GGCC 5 cut(s) 95, 170, 214, 243, 279
BsuTUI ATCGAT 1 cut(s) 265
BtsCI GGATG 1 cut(s) 16
Cac8I GCNNGC 1 cut(s) 181
CaiI CAGNNNCTG 2 cut(s) 65, 306
Cfr13I GGNCC 2 cut(s) 242, 278
ClaI ATCGAT 1 cut(s) 265
CviAII CATG 2 cut(s) 180, 239
DdeI CTNAG 2 cut(s) 130, 172
DpnI GATC 2 cut(s) 219, 264
DpnII GATC 2 cut(s) 217, 262
Eam1104I CTCTTC 1 cut(s) 132
EarI CTCTTC 1 cut(s) 132
Eco147I AGGCCT 2 cut(s) 170, 214
Eco88I CYCGRG 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 278
FaeI CATG 2 cut(s) 183, 242
FaiI YATR 3 cut(s) 84, 181, 240
FatI CATG 2 cut(s) 179, 238
Fnu4HI GCNGC 2 cut(s) 63, 177
FokI GGATG 1 cut(s) 23
Fsp4HI GCNGC 2 cut(s) 63, 177
FspBI CTAG 1 cut(s) 123
GluI GCNGC 2 cut(s) 63, 177
HaeIII GGCC 5 cut(s) 95, 170, 214, 243, 279
Hin1II CATG 2 cut(s) 183, 242
HinfI GANTC 3 cut(s) 20, 126, 287
Hpy188I TCNGA 2 cut(s) 10, 19
HpyAV CCTTC 1 cut(s) 269
HpyCH4III ACNGT 2 cut(s) 51, 315
HpyCH4V TGCA 5 cut(s) 4, 179, 183, 203, 300
HpyF10VI GCNNNNNNNGC 1 cut(s) 176
HpyF3I CTNAG 2 cut(s) 130, 172
Hsp92II CATG 2 cut(s) 183, 242
Kzo9I GATC 2 cut(s) 217, 262
LpnPI CCDG 7 cut(s) 77, 85, 137, 228, 243, 244, 292
Lsp1109I GCAGC 1 cut(s) 163
LweI GCATC 1 cut(s) 293
MaeI CTAG 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 232
MalI GATC 2 cut(s) 219, 264
MboI GATC 2 cut(s) 217, 262
MboII GAAGA 1 cut(s) 149
MmeI TCCRAC 1 cut(s) 123
MnlI CCTC 5 cut(s) 68, 127, 181, 204, 255
MseI TTAA 1 cut(s) 249
MspA1I CMGCKG 2 cut(s) 65, 176
MwoI GCNNNNNNNGC 1 cut(s) 176
NdeII GATC 2 cut(s) 217, 262
NlaIII CATG 2 cut(s) 183, 242
NlaIV GGNNCC 1 cut(s) 280
NmeAIII GCCGAG 1 cut(s) 121
NspI RCATGY 1 cut(s) 183
PaeI GCATGC 1 cut(s) 183
PaeR7I CTCGAG 1 cut(s) 110
PceI AGGCCT 2 cut(s) 170, 214
PfeI GAWTC 3 cut(s) 20, 126, 287
PkrI GCNGC 2 cut(s) 64, 178
PspN4I GGNNCC 1 cut(s) 280
PspPI GGNCC 2 cut(s) 242, 278
PspXI VCTCGAGB 1 cut(s) 110
PstNI CAGNNNCTG 2 cut(s) 65, 306
PvuII CAGCTG 1 cut(s) 176
SaqAI TTAA 1 cut(s) 249
SatI GCNGC 2 cut(s) 63, 177
Sau3AI GATC 2 cut(s) 217, 262
Sau96I GGNCC 2 cut(s) 242, 278
SetI ASST 3 cut(s) 124, 178, 298
SfaNI GCATC 1 cut(s) 293
SfcI CTRYAG 1 cut(s) 47
Sfr274I CTCGAG 1 cut(s) 110
SlaI CTCGAG 1 cut(s) 110
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
SphI GCATGC 1 cut(s) 183
SseBI AGGCCT 2 cut(s) 170, 214
SsiI CCGC 1 cut(s) 63
SspMI CTAG 1 cut(s) 123
StuI AGGCCT 2 cut(s) 170, 214
TaaI ACNGT 2 cut(s) 51, 315
TaqI TCGA 2 cut(s) 111, 265
TauI GCSGC 1 cut(s) 65
TfiI GAWTC 3 cut(s) 20, 126, 287
Tru1I TTAA 1 cut(s) 249
Tru9I TTAA 1 cut(s) 249
TseI GCWGC 1 cut(s) 176
XceI RCATGY 1 cut(s) 183
XhoI CTCGAG 1 cut(s) 110
XspI CTAG 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.