AT3G23900

Serine arginine repetitive matrix protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
8631482 .. 8636066
4585 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G23900.4

Sequence Viewer

Length: 2964 bp
ATGGCTTCAGATCGTGGTTCTGCAGCTTCTGGTGGTAAGCCCATTTGGATGAAACATGCGGAAGATGCAAAAATCAAAGACGAAGGAGAGAAAGACGCTGCGGCAAAAGCAGCTTTTGAAGCTACATTCAAAGGTGTAGACCAAACTACACATTTGATTGAACCTGTTGCACCGGTACCGGAATCCGCACCGGAATCTGATAGTGATTCAGATGATGATGATGATGATGAATCTGATTACTTGTCTAGGAAACCAATTGGTCCTGTGGATCCGAGTAAGTCTACAGCTTCTGGTGCTGGTATTGGTGGTGGAACGGCTTGTGTTCCGTCTACGTTTGTTGTTGTAACTAAGGATTCTGATGGGAGGAAAGTTCCAAATGGTGGAGCTTTGATTAGAGTTAAAGTGTCTCCTGGTGTTGGTGTTGGTGGTACTGATCAAGAAGGTGTGGTTAAAGATGTTGGTGATGGGAGTTATGCTGTTACTTATGTTGTGCCTAAGAGAGGAAACTATATGGTTAATATTGAATGCAATGGGAATGCTATCATGGGAAGTCCCTTTCCTGTCTTCTTTAGCCAAGGGTCTTCTTCTACTGGACTGATGGGTTCTGCTCCAGCTTCATACTCGAATCTTATAAATCAAACAATGCCAAACATGCCTAATTACACTGGTTCTGTTTCGGGTGCTTTCCCGGGGTTGTTGGGGATGGTTCCAGGGATTGCATCTGGTCCTTCAGGTGGTGCTATTTTGCCTGGAGTTGGAGCTTCACTTGGGGAAGTTTGTCGAGAATATCTTAATGGTAGATGTGTGAACTCTATGTGCAAGTTAAACCACCCTCCTCAGAATTTGCTGATGACTGCTATAGCTGCAACGACAAGTATGGGTAACCTTAGTCAGGTGCCTATGGCTCCTTCTGCTGCTGCAATGGCTGCTGCGCAGGCTATTGTTGCTGCACAGGCTCTTCAAGCTCATGCTTCTCAGATGCAAGCACAGGCTCAATCAAACAAGGGATCTTTAGGTTCCCCAGAAAAAGGAGAAAACGGGGATTTGAAGAAATTTCTCCAAGTTAGCAACCTAAGTCCATCGCTTACAACTGAACAACTTAGGCAGCTATTTAGCTTCTGTGGCACAGTAGTTGACTGTAGTATAACTGATTCAAAGCATATCGCCTACATAGAATACTCGAATTCCGAAGAAGCAACAGCTGCTTTGGCATTAAACAATACGGAAGTCTTTGGTAGAGCATTGAATGTTGAGATTGCAAAATCGCTACCTCACAAACCATCTTCAAATAATTCTTCGTCCTCACTACCACTGATGATGCAACAGGCCGTCGCGATGCAGCAGATGCAATTCCAGCAGGCTATACTAATGCAACAAGCCGTGGCTACTCAGCAGGCAGCAAATAGAGCTGCCACAATGAAGTCTGCCACTGAGCTTGCAGCAGCTAGAGCTGCAGAGATAAGTAGGAAACTGAGACCTGATGGAGTTGGAAATGATGAAAAAGAAGCTGATCAGAAGTCTAGGTCACCATCTAAGTCTCCTGCAAGGTCGAGATCAAAGTCAAAATCACCAATAAGTTACAGGCGAAGACGGAGATCTCCAACCTATTCACCACCGTTTCGTCGCCCAAGAAGTCACAGATCGAGATCACCATTAAGATATCAACGGCGATCAACTTATGAAGGGAGAAGGCGGTCATATAGAGATTCTAGGGATATTTCTGAAAGTAGGAGATACGGTAGATCAGATGAACACCATTCTTCTAGTTCAAGGAGAAGTAGGAGTGTAAGCCCTAAAAAGAGAAAATCTGGACAAGAAGATTCAGAGCTGTCAAGACTTCGACGAGATAGCTCATCACGTGGAGAGAAGAAATCATCTCGTGCTGGTTCACGATCACCAAGGCGACGTAAGGAAGTTAAGTCAACCCCAAGAGATGATGAGGAAAACAAAGTGAAACGTAGAACACGTTCAAGATCTAGATCAGTGGAAGATTCTGCAGATATAAAGGATAAATCTAGAGATGAGGAATTGAAACATCACAAAAAGCGGTCGAGGTCAAGATCTCGTGAAGATAGGAGTAAAACCAGAGACACATCTCGAAATTCTGATGAAGCTAAACAGAAACACCGGCAGAGGTCTAGGTCCAGATCATTGGAAAATGACAATGGATCTCATGAGAATGTTGATGTTGCTCAAGACAATGATCTAAATTCCCGTCACAGTAAGCGCAGGTCAAAATCATTGGACGAGGACTATGATATGAAAGAGAGGAGGGGAAGGTCCAGGTCCAGATCATTGGAAACGAAAAACAGGTCTTCTAGGAAGAATAAGCTGGATGAAGACAGAAACACAGGATCACGTCGAAGGAGGTCCAGGTCAAAATCAGTGGAAGGTAAGCGCAGTTATAACAAGGAGACTCGAAGCAGGGACAAAAAGTCCAAGCGTCGTAGTGGAAGACGGTCGAGGTCACCATCATCTGAGGGTAAGCAAGGGAGAGATATCAGGTCATCCCCTGGATATTCTGATGAAAAGAAATCAAGACATAAACGGCACTCCAGGTCAAGATCAATAGAGAAAAAGAACAGTTCAAGAGATAAAAGGTCAAAACGTCATGAAAGATTGCGGTCATCATCTCCTGGACGTGACAAAAGACGGGGCGATAGATCATTATCTCCTGTTAGTTCAGAGGATCATAAGATCAAGAAAAGACACTCTGGATCAAAATCTGTGAAAGAGAAACCCCACTCAGATTATGAGAAAGTTGACGATGGAGATGCAAATTCAGATTCTAGTCAGCAGGAAAGGAATCTTGAAGGTCATTTATTGTCATTGGATTCGATGTCATCACAGGATGTGGAGAAGTCAAAAGAGAATCCACCATCTAGCAGCTCAGTGGAAAGAGGTGATGCAAATGATGATGAGAAGTTTAAGATTGAGGAGAAAAGGATTATTCTTAAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

987

Amino Acids

108.79

Weight (kDa)

10.1

Isoelectric Point (pI)

86.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Filamin PF00630 88 - 186 8.6e-19 Filamin/ABP280 repeat
RRM_1 PF00076 355 - 415 1.5e-13 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 632, 2406
Acc16I TGCGCA 1 cut(s) 933
Acc36I ACCTGC 1 cut(s) 2220
Acc65I GGTACC 1 cut(s) 175
AccB1I GGYRCC 2 cut(s) 175, 895
AccB7I CCANNNNNTGG 1 cut(s) 380
AccI GTMKAC 3 cut(s) 138, 281, 329
AccII CGCG 1 cut(s) 1334
AciI CCGC 6 cut(s) 59, 101, 186, 1693, 2047, 2623
AclWI GGATC 7 cut(s) 263, 276, 1015, 2176, 2362, 2697, 2725
AcsI RAATTY 6 cut(s) 841, 1052, 1183, 2101, 2209, 2779
AcuI CTGAAG 1 cut(s) 714
AcvI CACGTG 1 cut(s) 1859
AfaI GTAC 2 cut(s) 177, 430
AfiI CCNNNNNNNGG 7 cut(s) 380, 416, 500, 734, 755, 892, 1028
AflII CTTAAG 1 cut(s) 2954
AflIII ACRYGT 1 cut(s) 1964
AgeI ACCGGT 1 cut(s) 172
AhdI GACNNNNNGTC 1 cut(s) 2434
AjiI CACGTC 2 cut(s) 2360, 2642
AjnI CCWGG 8 cut(s) 409, 709, 748, 2282, 2372, 2512, 2555, 2635
Alw26I GTCTC 5 cut(s) 411, 1468, 1542, 2082, 2408
AlwI GGATC 7 cut(s) 263, 276, 1015, 2176, 2362, 2697, 2725
AlwNI CAGNNNCTG 2 cut(s) 29, 290
Ama87I CYCGRG 1 cut(s) 688
AoxI GGCC 1 cut(s) 1326
ApoI RAATTY 6 cut(s) 841, 1052, 1183, 2101, 2209, 2779
ArsI GACNNNNNNTTYG 2 cut(s) 2297, 2329
AsiGI ACCGGT 1 cut(s) 172
Asp700I GAANNNNTTC 1 cut(s) 1966
Asp718I GGTACC 1 cut(s) 175
AspLEI GCGC 3 cut(s) 934, 2229, 2400
AspS9I GGNCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
AsuC2I CCSGG 2 cut(s) 689, 690
AsuHPI GGTGA 8 cut(s) 473, 1518, 1560, 1602, 1641, 1887, 2460, 2915
AvaI CYCGRG 1 cut(s) 688
AvaII GGWCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
BamHI GGATCC 1 cut(s) 268
BanI GGYRCC 2 cut(s) 175, 895
BauI CACGAG 2 cut(s) 1878, 2064
BbrPI CACGTG 1 cut(s) 1859
BbsI GAAGAC 6 cut(s) 556, 573, 1594, 2307, 2346, 2461
BceAI ACGGC 5 cut(s) 330, 1313, 1364, 1682, 2564
BcgI CGANNNNNNTGC 2 cut(s) 2756, 2790
BciT130I CCWGG 8 cut(s) 411, 711, 750, 2284, 2374, 2514, 2557, 2637
BclI TGATCA 2 cut(s) 433, 1510
BcnI CCSGG 2 cut(s) 689, 690
BcoDI GTCTC 5 cut(s) 411, 1468, 1542, 2082, 2408
BfmI CTRYAG 6 cut(s) 21, 282, 858, 1138, 1452, 1995
BfrI CTTAAG 1 cut(s) 2954
BfuAI ACCTGC 1 cut(s) 2220
BglII AGATCT 3 cut(s) 1595, 1973, 2060
Bme18I GGWCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
BmeRI GACNNNNNGTC 1 cut(s) 2434
BmeT110I CYCGRG 1 cut(s) 688
BmgBI CACGTC 2 cut(s) 2360, 2642
BmgT120I GGNCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
BmiI GGNNCC 6 cut(s) 177, 270, 708, 897, 906, 1018
BmsI GCATC 8 cut(s) 55, 728, 969, 1308, 1326, 1335, 2764, 2896
BpiI GAAGAC 6 cut(s) 556, 573, 1594, 2307, 2346, 2461
BpmI CTGGAG 3 cut(s) 594, 771, 2539
BpuEI CTTGAG 1 cut(s) 2178
BpuMI CCSGG 2 cut(s) 689, 690
BsaAI YACGTR 1 cut(s) 1859
BsaBI GATNNNNATC 4 cut(s) 1645, 1978, 2668, 2722
BsaI GGTCTC 1 cut(s) 1468
BsaJI CCNNGG 7 cut(s) 574, 688, 689, 710, 1380, 1898, 2512
BsaWI WCCGGW 3 cut(s) 172, 178, 190
BsaXI ACNNNNNCTCC 2 cut(s) 1723, 1753
Bsc4I CCNNNNNNNGG 7 cut(s) 380, 416, 500, 734, 755, 892, 1028
Bse118I RCCGGY 2 cut(s) 172, 2127
Bse1I ACTGG 2 cut(s) 595, 670
Bse3DI GCAATG 2 cut(s) 535, 927
Bse8I GATNNNNATC 4 cut(s) 1645, 1978, 2668, 2722
BseBI CCWGG 8 cut(s) 411, 711, 750, 2284, 2374, 2514, 2557, 2637
BseDI CCNNGG 7 cut(s) 574, 688, 689, 710, 1380, 1898, 2512
BseGI GGATG 5 cut(s) 54, 708, 2341, 2507, 2857
BseJI GATNNNNATC 4 cut(s) 1645, 1978, 2668, 2722
BseLI CCNNNNNNNGG 7 cut(s) 380, 416, 500, 734, 755, 892, 1028
BseMI GCAATG 2 cut(s) 535, 927
BseMII CTCAG 8 cut(s) 851, 989, 1403, 1422, 1463, 2469, 2760, 2904
BseNI ACTGG 2 cut(s) 595, 670
BseRI GAGGAG 3 cut(s) 825, 2284, 2951
BsgI GTGCAG 1 cut(s) 933
Bsh1236I CGCG 1 cut(s) 1334
Bsh1285I CGRYCG 2 cut(s) 2051, 2462
BshFI GGCC 1 cut(s) 1328
BshNI GGYRCC 2 cut(s) 175, 895
BshTI ACCGGT 1 cut(s) 172
BsiEI CGRYCG 2 cut(s) 2051, 2462
BsiHKCI CYCGRG 1 cut(s) 688
BsiSI CCGG 5 cut(s) 173, 179, 191, 689, 2128
BslFI GGGAC 2 cut(s) 537, 2441
BslI CCNNNNNNNGG 7 cut(s) 380, 416, 500, 734, 755, 892, 1028
BsmAI GTCTC 5 cut(s) 411, 1468, 1542, 2082, 2408
BsmFI GGGAC 2 cut(s) 537, 2441
BsmI GAATGC 2 cut(s) 530, 541
BsnI GGCC 1 cut(s) 1328
Bso31I GGTCTC 1 cut(s) 1468
BsoBI CYCGRG 1 cut(s) 688
Bsp68I TCGCGA 1 cut(s) 1334
BspACI CCGC 6 cut(s) 59, 101, 186, 1693, 2047, 2623
BspANI GGCC 1 cut(s) 1328
BspCNI CTCAG 8 cut(s) 850, 988, 1402, 1423, 1464, 2470, 2759, 2903
BspFNI CGCG 1 cut(s) 1334
BspHI TCATGA 2 cut(s) 2173, 2611
BspLI GGNNCC 6 cut(s) 177, 270, 708, 897, 906, 1018
BspMAI CTGCAG 3 cut(s) 25, 1456, 1999
BspMI ACCTGC 1 cut(s) 2220
BspPI GGATC 7 cut(s) 263, 276, 1015, 2176, 2362, 2697, 2725
BspQI GCTCTTC 1 cut(s) 963
BspT107I GGYRCC 2 cut(s) 175, 895
BspTI CTTAAG 1 cut(s) 2954
BspTNI GGTCTC 1 cut(s) 1468
BsrDI GCAATG 2 cut(s) 535, 927
BsrFI RCCGGY 2 cut(s) 172, 2127
BsrI ACTGG 2 cut(s) 595, 670
BssAI RCCGGY 2 cut(s) 172, 2127
BssECI CCNNGG 7 cut(s) 574, 688, 689, 710, 1380, 1898, 2512
BssSI CACGAG 2 cut(s) 1878, 2064
BssT1I CCWWGG 2 cut(s) 574, 1898
Bst2BI CACGAG 2 cut(s) 1878, 2064
Bst2UI CCWGG 8 cut(s) 411, 711, 750, 2284, 2374, 2514, 2557, 2637
Bst4CI ACNGT 7 cut(s) 1129, 1139, 1617, 1739, 2222, 2460, 2585
Bst6I CTCTTC 1 cut(s) 963
BstAFI CTTAAG 1 cut(s) 2954
BstAPI GCANNNNNTGC 3 cut(s) 926, 1202, 1345
BstBAI YACGTR 1 cut(s) 1859
BstC8I GCNNGC 5 cut(s) 936, 984, 1359, 1395, 1437
BstDSI CCRYGG 1 cut(s) 1380
BstEII GGTNACC 3 cut(s) 881, 1524, 2466
BstENI CCTNNNNNAGG 2 cut(s) 498, 890
BstF5I GGATG 5 cut(s) 54, 708, 2341, 2507, 2857
BstFNI CGCG 1 cut(s) 1334
BstHHI GCGC 3 cut(s) 934, 2229, 2400
BstMAI GTCTC 5 cut(s) 411, 1468, 1542, 2082, 2408
BstMCI CGRYCG 2 cut(s) 2051, 2462
BstNI CCWGG 8 cut(s) 411, 711, 750, 2284, 2374, 2514, 2557, 2637
BstNSI RCATGY 2 cut(s) 59, 655
BstPI GGTNACC 3 cut(s) 881, 1524, 2466
BstSFI CTRYAG 6 cut(s) 21, 282, 858, 1138, 1452, 1995
BstUI CGCG 1 cut(s) 1334
BstV2I GAAGAC 6 cut(s) 556, 573, 1594, 2307, 2346, 2461
BstX2I RGATCY 6 cut(s) 268, 1007, 1595, 1973, 2060, 2168
BstXI CCANNNNNNTGG 2 cut(s) 2152, 2296
BstYI RGATCY 6 cut(s) 268, 1007, 1595, 1973, 2060, 2168
BsuRI GGCC 1 cut(s) 1328
BtgI CCRYGG 1 cut(s) 1380
BtgZI GCGATG 2 cut(s) 1065, 1349
BtrI CACGTC 2 cut(s) 2360, 2642
BtsCI GGATG 5 cut(s) 54, 708, 2341, 2507, 2857
BtsIMutI CAGTG 6 cut(s) 663, 1310, 1428, 1989, 2391, 2898
BtuMI TCGCGA 1 cut(s) 1334
BveI ACCTGC 1 cut(s) 2220
Cac8I GCNNGC 5 cut(s) 936, 984, 1359, 1395, 1437
CaiI CAGNNNCTG 2 cut(s) 29, 290
CciI TCATGA 2 cut(s) 2173, 2611
CfoI GCGC 3 cut(s) 934, 2229, 2400
Cfr10I RCCGGY 2 cut(s) 172, 2127
Cfr13I GGNCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
Cfr9I CCCGGG 1 cut(s) 688
CseI GACGC 2 cut(s) 104, 2432
Csp6I GTAC 2 cut(s) 176, 429
CspAI ACCGGT 1 cut(s) 172
CspCI CAANNNNNGTGG 4 cut(s) 1417, 1452, 2367, 2402
CviAII CATG 6 cut(s) 56, 544, 652, 968, 2174, 2612
CviQI GTAC 2 cut(s) 176, 429
DriI GACNNNNNGTC 1 cut(s) 2434
Eam1104I CTCTTC 1 cut(s) 963
Eam1105I GACNNNNNGTC 1 cut(s) 2434
EarI CTCTTC 1 cut(s) 963
Eco130I CCWWGG 2 cut(s) 574, 1898
Eco31I GGTCTC 1 cut(s) 1468
Eco32I GATATC 2 cut(s) 1661, 2500
Eco47I GGWCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
Eco57I CTGAAG 1 cut(s) 714
Eco72I CACGTG 1 cut(s) 1859
Eco88I CYCGRG 1 cut(s) 688
Eco91I GGTNACC 3 cut(s) 881, 1524, 2466
EcoNI CCTNNNNNAGG 2 cut(s) 498, 890
EcoO65I GGTNACC 3 cut(s) 881, 1524, 2466
EcoRI GAATTC 1 cut(s) 1183
EcoRII CCWGG 8 cut(s) 409, 709, 748, 2282, 2372, 2512, 2555, 2635
EcoRV GATATC 2 cut(s) 1661, 2500
EcoT14I CCWWGG 2 cut(s) 574, 1898
ErhI CCWWGG 2 cut(s) 574, 1898
FaeI CATG 6 cut(s) 59, 547, 655, 971, 2177, 2615
FaqI GGGAC 2 cut(s) 537, 2441
FatI CATG 6 cut(s) 55, 543, 651, 967, 2173, 2611
FbaI TGATCA 2 cut(s) 433, 1510
FblI GTMKAC 3 cut(s) 138, 281, 329
FokI GGATG 5 cut(s) 61, 715, 2348, 2494, 2864
FspI TGCGCA 1 cut(s) 933
GlaI GCGC 3 cut(s) 933, 2228, 2399
GsuI CTGGAG 3 cut(s) 594, 771, 2539
HaeIII GGCC 1 cut(s) 1328
HapII CCGG 5 cut(s) 173, 179, 191, 689, 2128
HgaI GACGC 2 cut(s) 104, 2432
HhaI GCGC 3 cut(s) 934, 2229, 2400
Hin1II CATG 6 cut(s) 59, 547, 655, 971, 2177, 2615
Hin6I GCGC 3 cut(s) 932, 2227, 2398
HinP1I GCGC 3 cut(s) 932, 2227, 2398
HincII GTYRAC 3 cut(s) 1135, 1923, 2764
HindII GTYRAC 3 cut(s) 1135, 1923, 2764
HpaII CCGG 5 cut(s) 173, 179, 191, 689, 2128
HphI GGTGA 8 cut(s) 473, 1518, 1560, 1602, 1641, 1887, 2460, 2915
Hpy166II GTNNAC 8 cut(s) 139, 282, 330, 808, 1135, 1889, 1923, 2764
Hpy8I GTNNAC 8 cut(s) 139, 282, 330, 808, 1135, 1889, 1923, 2764
Hpy99I CGWCG 6 cut(s) 1334, 1626, 1845, 1908, 2364, 2448
HpyCH4III ACNGT 7 cut(s) 1129, 1139, 1617, 1739, 2222, 2460, 2585
HpyCH4IV ACGT 8 cut(s) 332, 1858, 1906, 1957, 1966, 2359, 2608, 2641
HpySE526I ACGT 8 cut(s) 332, 1858, 1906, 1957, 1966, 2359, 2608, 2641
Hsp92II CATG 6 cut(s) 59, 547, 655, 971, 2177, 2615
HspAI GCGC 3 cut(s) 932, 2227, 2398
KpnI GGTACC 1 cut(s) 179
Ksp22I TGATCA 2 cut(s) 433, 1510
LguI GCTCTTC 1 cut(s) 963
LmnI GCTCC 4 cut(s) 383, 613, 758, 910
LweI GCATC 8 cut(s) 55, 728, 969, 1308, 1326, 1335, 2764, 2896
MaeII ACGT 8 cut(s) 332, 1858, 1906, 1957, 1966, 2359, 2608, 2641
MaeIII GTNAC 9 cut(s) 343, 478, 881, 1524, 1577, 1634, 2216, 2466, 2642
MfeI CAATTG 1 cut(s) 255
MflI RGATCY 6 cut(s) 268, 1007, 1595, 1973, 2060, 2168
MlyI GAGTC 1 cut(s) 2410
MmeI TCCRAC 3 cut(s) 736, 1468, 1625
MroXI GAANNNNTTC 1 cut(s) 1966
MslI CAYNNNNRTG 2 cut(s) 47, 2178
MspA1I CMGCKG 1 cut(s) 1202
MspCI CTTAAG 1 cut(s) 2954
MspI CCGG 5 cut(s) 173, 179, 191, 689, 2128
MunI CAATTG 1 cut(s) 255
Mva1269I GAATGC 2 cut(s) 530, 541
MvaI CCWGG 8 cut(s) 411, 711, 750, 2284, 2374, 2514, 2557, 2637
MvnI CGCG 1 cut(s) 1334
NciI CCSGG 2 cut(s) 689, 690
NlaIII CATG 6 cut(s) 59, 547, 655, 971, 2177, 2615
NlaIV GGNNCC 6 cut(s) 177, 270, 708, 897, 906, 1018
NmuCI GTSAC 5 cut(s) 1524, 1634, 2216, 2466, 2642
NruI TCGCGA 1 cut(s) 1334
NsbI TGCGCA 1 cut(s) 933
NspI RCATGY 2 cut(s) 59, 655
PagI TCATGA 2 cut(s) 2173, 2611
PciSI GCTCTTC 1 cut(s) 963
PcsI WCGNNNNNNNCGW 1 cut(s) 1963
PctI GAATGC 2 cut(s) 530, 541
PdmI GAANNNNTTC 1 cut(s) 1966
PflMI CCANNNNNTGG 1 cut(s) 380
PfoI TCCNGGA 1 cut(s) 2635
PinAI ACCGGT 1 cut(s) 172
PleI GAGTC 1 cut(s) 2410
PmaCI CACGTG 1 cut(s) 1859
PmlI CACGTG 1 cut(s) 1859
PpsI GAGTC 1 cut(s) 2410
Ppu21I YACGTR 1 cut(s) 1859
PsiI TTATAA 2 cut(s) 632, 2406
Psp6I CCWGG 8 cut(s) 409, 709, 748, 2282, 2372, 2512, 2555, 2635
PspCI CACGTG 1 cut(s) 1859
PspEI GGTNACC 3 cut(s) 881, 1524, 2466
PspGI CCWGG 8 cut(s) 409, 709, 748, 2282, 2372, 2512, 2555, 2635
PspN4I GGNNCC 6 cut(s) 177, 270, 708, 897, 906, 1018
PspPI GGNCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
PsrI GAACNNNNNNTAC 2 cut(s) 1951, 1983
PstI CTGCAG 3 cut(s) 25, 1456, 1999
PstNI CAGNNNCTG 2 cut(s) 29, 290
PsuI RGATCY 6 cut(s) 268, 1007, 1595, 1973, 2060, 2168
PvuII CAGCTG 1 cut(s) 1202
RruI TCGCGA 1 cut(s) 1334
RsaI GTAC 2 cut(s) 177, 430
RsaNI GTAC 2 cut(s) 176, 429
RseI CAYNNNNRTG 2 cut(s) 47, 2178
SapI GCTCTTC 1 cut(s) 963
Sau96I GGNCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
SchI GAGTC 1 cut(s) 2410
SfaNI GCATC 8 cut(s) 55, 728, 969, 1308, 1326, 1335, 2764, 2896
SfcI CTRYAG 6 cut(s) 21, 282, 858, 1138, 1452, 1995
SinI GGWCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
SmaI CCCGGG 1 cut(s) 690
SmiMI CAYNNNNRTG 2 cut(s) 47, 2178
SmlI CTYRAG 2 cut(s) 2193, 2954
SmoI CTYRAG 2 cut(s) 2193, 2954
SsiI CCGC 6 cut(s) 59, 101, 186, 1693, 2047, 2623
SspI AATATT 1 cut(s) 520
StyI CCWWGG 2 cut(s) 574, 1898
TaaI ACNGT 7 cut(s) 1129, 1139, 1617, 1739, 2222, 2460, 2585
TaiI ACGT 8 cut(s) 335, 1861, 1909, 1960, 1969, 2362, 2611, 2644
TauI GCSGC 1 cut(s) 104
TscAI CASTG 6 cut(s) 670, 1317, 1435, 1989, 2391, 2898
TseFI GTSAC 5 cut(s) 1524, 1634, 2216, 2466, 2642
Tsp45I GTSAC 5 cut(s) 1524, 1634, 2216, 2466, 2642
TspGWI ACGGA 3 cut(s) 315, 1238, 1606
TspMI CCCGGG 1 cut(s) 688
TspRI CASTG 6 cut(s) 670, 1317, 1435, 1989, 2391, 2898
Van91I CCANNNNNTGG 1 cut(s) 380
Vha464I CTTAAG 1 cut(s) 2954
VpaK11BI GGWCC 6 cut(s) 260, 725, 2142, 2280, 2286, 2370
XagI CCTNNNNNAGG 2 cut(s) 498, 890
XapI RAATTY 6 cut(s) 841, 1052, 1183, 2101, 2209, 2779
XbaI TCTAGA 2 cut(s) 1976, 2015
XceI RCATGY 2 cut(s) 59, 655
XmaI CCCGGG 1 cut(s) 688
XmiI GTMKAC 3 cut(s) 138, 281, 329
XmnI GAANNNNTTC 1 cut(s) 1966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.