pycom04g01250

Filamin-type immunoglobulin domains

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
1115500 .. 1118451
2952 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g01250.4

Sequence Viewer

Length: 1611 bp
ATGGCTGATCGAAATCTTGCACTTGTTAAGCCAATATGGATGAAGCAAGCCGAAGAGGCGAGGAGCAAGAGTGAGGCTGAGAAAGCCGCAGCGGCAAAAGCTGCTTTTGAAGCCACATTCAAAGATGTGGATAAGAATCGAGAGAAAGAAGTGGTGGCTGGATCAGATAGTGAATCTGAAGAAGCTGAGGACTTGGCGAACAAGCCCATTGGGCCGGTGGACCCTGCAAAGTGCACTGCAGCCGGGGCTGGGATCGCGGGTGGTACAGCATGTGCACCGTCTTCGTTTATGGTAGTGACTAAAGACTCTGATGGAAGGAAGGTTCCAAATGGTGGGGTGCAGATTAAGGTGAAAGTTGTGCCTGGAGTGGGAGTTGGGGGATCAGAGCAAGAAGGGATGGTGAAGGATATGGGTGATGGGACGTACACAGTTACTTATGTGGTGCCAAAACGAGGGAATTATATGGTGAGTGTGGAGTGCAGTGGTAAACCCATCATGGGTAGCCCATTCCCAGTGTTCTTCAGTGCAGGTTCCAGTGCTGGAGGACTGCTGGGATTGGCTCCGCCATCCACATTTCCTAATCTAGTTAACCAAACCATGCCTAACATGCCAAATTATTCAGCTTCTGTTTCAGGGGCATTCCCTGGACTGTTGGGAATGATTCCAGGCATTGTTCCTGGTGCTTCAGGAGGGGCTATATTGCCAGGAATTGGAGCATCTCTTGGGGAGGTTTGTAGAGACTACCTTAGTGGTAGGTGCGCCAAAATTGATTGTAAGCTGAACCACCCGCCTCACAATCTGCTAATGACTGCGTTAGCTGCAACCACCTCTATGGGAAATGTTAGCCAAGTGCCTATGGCACCTTCTGCAGCTGCAATGGCTGCTGCTCAGGCAATTGTTGCTGCCCAGGCTCTTCAAGCCCATGCTGCTCAGGTGCAAGCACAAGCTCAGTCAAACAAAGACTCTTCTGGTTCACTTGACAAAGCTGGAAAGGCTGATGTGCTGAAGAAGACGCTTCAAGTTAGCAATCTTAGCCCACTTCTCACTGTGGAACAGCTGAAAGAACTTTTTAGCTATTGTGGCACCGTTGTAGAATGTACCATCACTGACTCAAAGCATTTTGCATATATAGAATACTCAAAACCTGAAGAAGCAACTGCTGCTTTGCAATTGAATAGTATGGATGTTGGAGGCCGTCCTATGAATGTTGAGATGGCAAAATCACTTCCTCAGCAACCAGCTGCTATGAATTCCTCAATGGCTTCATCATCTCTTCCCATGGTGATGCAGCAAGCTGTTGCTATGCAACAGATGCAATTCCAGCAGGCTTTGCTTATGCAACAAACTATGACCGCCCAACAGGCAGCCAACCGAGCTGCAACCATGAAGACAGCAACAGAGTTAGCTGCAGCCAGAGCAGCAGAAATAAGTAAGAAATTTAAAGCTGATGGAGTAGAAATTGAAGAGAAGGAAACAAAAGAGAAATCTAGGTATGTCTCCATCACCATCTCGTGCAAGGTCAAAATCCAGATCCAGATCACCTATAAATTATCGCCGAAGGCGGAAGTCTCCTTCTTACTCTCCTCCATATCGCTATCCAAGAGATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

537

Amino Acids

56.0

Weight (kDa)

8.4

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 518
AccB1I GGYRCC 3 cut(s) 442, 859, 1082
AccB7I CCANNNNNTGG 2 cut(s) 332, 710
AccII CGCG 1 cut(s) 257
AciI CCGC 7 cut(s) 87, 92, 257, 563, 788, 1353, 1562
AclWI GGATC 4 cut(s) 169, 260, 388, 1525
AcsI RAATTY 2 cut(s) 1249, 1436
AcuI CTGAAG 5 cut(s) 198, 505, 669, 1025, 1167
AfaI GTAC 3 cut(s) 265, 425, 1099
AfiI CCNNNNNNNGG 6 cut(s) 249, 332, 368, 452, 497, 710
AgsI TTSAA 6 cut(s) 110, 121, 917, 1019, 1174, 1463
AjnI CCWGG 6 cut(s) 361, 643, 664, 676, 703, 906
AloI GAACNNNNNNTCC 2 cut(s) 306, 338
Alw21I GWGCWC 2 cut(s) 236, 277
Alw26I GTCTC 3 cut(s) 732, 1501, 1573
Alw44I GTGCAC 2 cut(s) 232, 273
AlwI GGATC 4 cut(s) 169, 260, 388, 1525
AlwNI CAGNNNCTG 1 cut(s) 626
AoxI GGCC 2 cut(s) 212, 1192
ApaLI GTGCAC 2 cut(s) 232, 273
ApoI RAATTY 2 cut(s) 1249, 1436
AspLEI GCGC 1 cut(s) 761
AspS9I GGNCC 2 cut(s) 212, 220
AsuC2I CCSGG 1 cut(s) 244
AsuHPI GGTGA 7 cut(s) 361, 412, 425, 478, 1294, 1495, 1531
AvaII GGWCC 1 cut(s) 220
BaeGI GKGCMC 2 cut(s) 236, 277
BanI GGYRCC 3 cut(s) 442, 859, 1082
BauI CACGAG 1 cut(s) 1510
BbsI GAAGAC 3 cut(s) 273, 1016, 1394
Bbv12I GWGCWC 2 cut(s) 236, 277
BbvCI CCTCAGC 2 cut(s) 186, 1230
BceAI ACGGC 1 cut(s) 1179
BcgI CGANNNNNNTGC 2 cut(s) 264, 298
BciT130I CCWGG 6 cut(s) 363, 645, 666, 678, 705, 908
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 3 cut(s) 732, 1501, 1573
BfaI CTAG 2 cut(s) 584, 1488
BfmI CTRYAG 3 cut(s) 237, 867, 1407
BfuAI ACCTGC 1 cut(s) 518
BglI GCCNNNNNGGC 4 cut(s) 56, 92, 211, 1361
Bme1390I CCNGG 7 cut(s) 244, 363, 645, 666, 678, 705, 908
Bme18I GGWCC 1 cut(s) 220
BmgT120I GGNCC 2 cut(s) 212, 220
BmiI GGNNCC 7 cut(s) 222, 324, 444, 532, 561, 861, 1084
BmrFI CCNGG 7 cut(s) 244, 363, 645, 666, 678, 705, 908
BmrI ACTGGG 1 cut(s) 506
BmsI GCATC 3 cut(s) 725, 1275, 1302
BmuI ACTGGG 1 cut(s) 506
BpiI GAAGAC 3 cut(s) 273, 1016, 1394
BpmI CTGGAG 2 cut(s) 384, 561
Bpu10I CCTNAGC 4 cut(s) 186, 888, 930, 1230
BpuMI CCSGG 1 cut(s) 244
BsaBI GATNNNNATC 3 cut(s) 12, 135, 1535
BsaJI CCNNGG 4 cut(s) 243, 643, 906, 1278
BsaXI ACNNNNNCTCC 4 cut(s) 55, 85, 357, 387
Bsc4I CCNNNNNNNGG 6 cut(s) 249, 332, 368, 452, 497, 710
Bse118I RCCGGY 1 cut(s) 214
Bse1I ACTGG 2 cut(s) 512, 534
Bse3DI GCAATG 1 cut(s) 882
Bse8I GATNNNNATC 3 cut(s) 12, 135, 1535
BseBI CCWGG 6 cut(s) 363, 645, 666, 678, 705, 908
BseDI CCNNGG 4 cut(s) 243, 643, 906, 1278
BseGI GGATG 4 cut(s) 45, 402, 566, 1189
BseJI GATNNNNATC 3 cut(s) 12, 135, 1535
BseLI CCNNNNNNNGG 6 cut(s) 249, 332, 368, 452, 497, 710
BseMI GCAATG 1 cut(s) 882
BseMII CTCAG 6 cut(s) 69, 177, 902, 944, 962, 1244
BseNI ACTGG 2 cut(s) 512, 534
BseRI GAGGAG 2 cut(s) 76, 1573
BseSI GKGCMC 2 cut(s) 236, 277
BseYI CCCAGC 2 cut(s) 248, 550
BsgI GTGCAG 3 cut(s) 359, 499, 546
Bsh1236I CGCG 1 cut(s) 257
BshFI GGCC 2 cut(s) 214, 1194
BshNI GGYRCC 3 cut(s) 442, 859, 1082
BsiHKAI GWGCWC 2 cut(s) 236, 277
BsiSI CCGG 2 cut(s) 215, 243
BslFI GGGAC 1 cut(s) 433
BslI CCNNNNNNNGG 6 cut(s) 249, 332, 368, 452, 497, 710
BsmAI GTCTC 3 cut(s) 732, 1501, 1573
BsmFI GGGAC 1 cut(s) 433
BsmI GAATGC 1 cut(s) 638
BsnI GGCC 2 cut(s) 214, 1194
Bsp1286I GDGCHC 2 cut(s) 236, 277
Bsp143I GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
Bsp19I CCATGG 1 cut(s) 1278
BspACI CCGC 7 cut(s) 87, 92, 257, 563, 788, 1353, 1562
BspANI GGCC 2 cut(s) 214, 1194
BspCNI CTCAG 6 cut(s) 70, 178, 901, 943, 961, 1243
BspFNI CGCG 1 cut(s) 257
BspLI GGNNCC 7 cut(s) 222, 324, 444, 532, 561, 861, 1084
BspMAI CTGCAG 3 cut(s) 241, 871, 1411
BspMI ACCTGC 1 cut(s) 518
BspPI GGATC 4 cut(s) 169, 260, 388, 1525
BspQI GCTCTTC 1 cut(s) 918
BspT107I GGYRCC 3 cut(s) 442, 859, 1082
BsrDI GCAATG 1 cut(s) 882
BsrFI RCCGGY 1 cut(s) 214
BsrI ACTGG 2 cut(s) 512, 534
BssAI RCCGGY 1 cut(s) 214
BssECI CCNNGG 4 cut(s) 243, 643, 906, 1278
BssMI GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
BssSI CACGAG 1 cut(s) 1510
BssT1I CCWWGG 1 cut(s) 1278
Bst2BI CACGAG 1 cut(s) 1510
Bst2UI CCWGG 6 cut(s) 363, 645, 666, 678, 705, 908
Bst4CI ACNGT 5 cut(s) 279, 430, 651, 1048, 1087
Bst6I CTCTTC 5 cut(s) 48, 918, 970, 1278, 1458
BstAPI GCANNNNNTGC 7 cut(s) 101, 866, 881, 899, 1160, 1312, 1330
BstC8I GCNNGC 4 cut(s) 48, 939, 1293, 1326
BstDEI CTNAG 8 cut(s) 78, 186, 746, 888, 930, 948, 1031, 1230
BstDSI CCRYGG 1 cut(s) 1278
BstF5I GGATG 4 cut(s) 45, 402, 566, 1189
BstFNI CGCG 1 cut(s) 257
BstHHI GCGC 1 cut(s) 761
BstKTI GATC 7 cut(s) 10, 164, 255, 383, 1533, 1539, 1607
BstMAI GTCTC 3 cut(s) 732, 1501, 1573
BstMBI GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
BstNI CCWGG 6 cut(s) 363, 645, 666, 678, 705, 908
BstNSI RCATGY 2 cut(s) 273, 610
BstSCI CCNGG 7 cut(s) 242, 361, 643, 664, 676, 703, 906
BstSFI CTRYAG 3 cut(s) 237, 867, 1407
BstSLI GKGCMC 2 cut(s) 236, 277
BstUI CGCG 1 cut(s) 257
BstV2I GAAGAC 3 cut(s) 273, 1016, 1394
BstX2I RGATCY 1 cut(s) 1530
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 1 cut(s) 1530
BsuRI GGCC 2 cut(s) 214, 1194
BtgI CCRYGG 1 cut(s) 1278
BtsCI GGATG 4 cut(s) 45, 402, 566, 1189
BtsI GCAGTG 2 cut(s) 234, 487
BtsIMutI CAGTG 7 cut(s) 234, 487, 519, 529, 541, 1044, 1104
BveI ACCTGC 1 cut(s) 518
Cac8I GCNNGC 4 cut(s) 48, 939, 1293, 1326
CaiI CAGNNNCTG 1 cut(s) 626
CfoI GCGC 1 cut(s) 761
Cfr10I RCCGGY 1 cut(s) 214
Cfr13I GGNCC 2 cut(s) 212, 220
CseI GACGC 1 cut(s) 1021
Csp6I GTAC 3 cut(s) 264, 424, 1098
CviAII CATG 7 cut(s) 270, 496, 598, 607, 923, 1279, 1384
CviQI GTAC 3 cut(s) 264, 424, 1098
DdeI CTNAG 8 cut(s) 78, 186, 746, 888, 930, 948, 1031, 1230
DpnI GATC 7 cut(s) 9, 163, 254, 382, 1532, 1538, 1606
DpnII GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
DraI TTTAAA 1 cut(s) 1441
Eam1104I CTCTTC 5 cut(s) 48, 918, 970, 1278, 1458
EarI CTCTTC 5 cut(s) 48, 918, 970, 1278, 1458
EciI GGCGGA 2 cut(s) 552, 1577
Eco130I CCWWGG 1 cut(s) 1278
Eco47I GGWCC 1 cut(s) 220
Eco57I CTGAAG 5 cut(s) 198, 505, 669, 1025, 1167
EcoRI GAATTC 1 cut(s) 1249
EcoRII CCWGG 6 cut(s) 361, 643, 664, 676, 703, 906
EcoT14I CCWWGG 1 cut(s) 1278
ErhI CCWWGG 1 cut(s) 1278
FaeI CATG 7 cut(s) 273, 499, 601, 610, 926, 1282, 1387
FaqI GGGAC 1 cut(s) 433
FatI CATG 7 cut(s) 269, 495, 597, 606, 922, 1278, 1383
FauI CCCGC 2 cut(s) 250, 795
FokI GGATG 4 cut(s) 52, 409, 553, 1196
FspBI CTAG 2 cut(s) 584, 1488
GlaI GCGC 1 cut(s) 760
GsaI CCCAGC 2 cut(s) 252, 554
GsuI CTGGAG 2 cut(s) 384, 561
HaeIII GGCC 2 cut(s) 214, 1194
HapII CCGG 2 cut(s) 215, 243
HgaI GACGC 1 cut(s) 1021
HhaI GCGC 1 cut(s) 761
Hin1II CATG 7 cut(s) 273, 499, 601, 610, 926, 1282, 1387
Hin6I GCGC 1 cut(s) 759
HinP1I GCGC 1 cut(s) 759
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HinfI GANTC 6 cut(s) 136, 173, 305, 661, 962, 1109
HpaI GTTAAC 1 cut(s) 589
HpaII CCGG 2 cut(s) 215, 243
HphI GGTGA 7 cut(s) 361, 412, 425, 478, 1294, 1495, 1531
Hpy166II GTNNAC 7 cut(s) 220, 234, 275, 426, 488, 589, 974
Hpy188I TCNGA 4 cut(s) 166, 178, 310, 385
Hpy188III TCNNGA 4 cut(s) 140, 687, 1528, 1534
Hpy8I GTNNAC 7 cut(s) 220, 234, 275, 426, 488, 589, 974
HpyAV CCTTC 8 cut(s) 309, 313, 386, 397, 873, 1462, 1552, 1582
HpyCH4III ACNGT 5 cut(s) 279, 430, 651, 1048, 1087
HpyCH4IV ACGT 1 cut(s) 422
HpyF3I CTNAG 8 cut(s) 78, 186, 746, 888, 930, 948, 1031, 1230
HpySE526I ACGT 1 cut(s) 422
Hsp92II CATG 7 cut(s) 273, 499, 601, 610, 926, 1282, 1387
HspAI GCGC 1 cut(s) 759
KspAI GTTAAC 1 cut(s) 589
Kzo9I GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
LguI GCTCTTC 1 cut(s) 918
LmnI GCTCC 3 cut(s) 63, 565, 713
LweI GCATC 3 cut(s) 725, 1275, 1302
MaeI CTAG 2 cut(s) 584, 1488
MaeII ACGT 1 cut(s) 422
MaeIII GTNAC 2 cut(s) 295, 430
MalI GATC 7 cut(s) 9, 163, 254, 382, 1532, 1538, 1606
MboI GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
MfeI CAATTG 2 cut(s) 894, 1169
MflI RGATCY 1 cut(s) 1530
MhlI GDGCHC 2 cut(s) 236, 277
MlyI GAGTC 3 cut(s) 299, 956, 1103
MmeI TCCRAC 1 cut(s) 1168
MseI TTAA 4 cut(s) 27, 345, 588, 1440
MslI CAYNNNNRTG 2 cut(s) 830, 1283
MspA1I CMGCKG 4 cut(s) 92, 872, 1057, 1241
MspI CCGG 2 cut(s) 215, 243
MspR9I CCNGG 7 cut(s) 244, 363, 645, 666, 678, 705, 908
MunI CAATTG 2 cut(s) 894, 1169
Mva1269I GAATGC 1 cut(s) 638
MvaI CCWGG 6 cut(s) 363, 645, 666, 678, 705, 908
MvnI CGCG 1 cut(s) 257
NciI CCSGG 1 cut(s) 244
NcoI CCATGG 1 cut(s) 1278
NdeII GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
NlaIII CATG 7 cut(s) 273, 499, 601, 610, 926, 1282, 1387
NlaIV GGNNCC 7 cut(s) 222, 324, 444, 532, 561, 861, 1084
NmuCI GTSAC 1 cut(s) 295
NspI RCATGY 2 cut(s) 273, 610
PciSI GCTCTTC 1 cut(s) 918
PctI GAATGC 1 cut(s) 638
PfeI GAWTC 3 cut(s) 136, 173, 661
PflMI CCANNNNNTGG 2 cut(s) 332, 710
PleI GAGTC 3 cut(s) 299, 956, 1103
PpsI GAGTC 3 cut(s) 299, 956, 1103
Psp6I CCWGG 6 cut(s) 361, 643, 664, 676, 703, 906
PspFI CCCAGC 2 cut(s) 248, 550
PspGI CCWGG 6 cut(s) 361, 643, 664, 676, 703, 906
PspN4I GGNNCC 7 cut(s) 222, 324, 444, 532, 561, 861, 1084
PspPI GGNCC 2 cut(s) 212, 220
PstI CTGCAG 3 cut(s) 241, 871, 1411
PstNI CAGNNNCTG 1 cut(s) 626
PsuI RGATCY 1 cut(s) 1530
PvuII CAGCTG 3 cut(s) 872, 1057, 1241
RsaI GTAC 3 cut(s) 265, 425, 1099
RsaNI GTAC 3 cut(s) 264, 424, 1098
RseI CAYNNNNRTG 2 cut(s) 830, 1283
SapI GCTCTTC 1 cut(s) 918
SaqAI TTAA 4 cut(s) 27, 345, 588, 1440
Sau3AI GATC 7 cut(s) 7, 161, 252, 380, 1530, 1536, 1604
Sau96I GGNCC 2 cut(s) 212, 220
SchI GAGTC 3 cut(s) 299, 956, 1103
ScrFI CCNGG 7 cut(s) 244, 363, 645, 666, 678, 705, 908
SduI GDGCHC 2 cut(s) 236, 277
SfaNI GCATC 3 cut(s) 725, 1275, 1302
SfcI CTRYAG 3 cut(s) 237, 867, 1407
SinI GGWCC 1 cut(s) 220
SmiMI CAYNNNNRTG 2 cut(s) 830, 1283
SsiI CCGC 7 cut(s) 87, 92, 257, 563, 788, 1353, 1562
SspMI CTAG 2 cut(s) 584, 1488
StyD4I CCNGG 7 cut(s) 242, 361, 643, 664, 676, 703, 906
StyI CCWWGG 1 cut(s) 1278
TaaI ACNGT 5 cut(s) 279, 430, 651, 1048, 1087
TaiI ACGT 1 cut(s) 425
TaqI TCGA 2 cut(s) 10, 139
TauI GCSGC 2 cut(s) 89, 95
TfiI GAWTC 3 cut(s) 136, 173, 661
Tru1I TTAA 4 cut(s) 27, 345, 588, 1440
Tru9I TTAA 4 cut(s) 27, 345, 588, 1440
TscAI CASTG 7 cut(s) 241, 487, 519, 529, 541, 1051, 1111
TseFI GTSAC 1 cut(s) 295
Tsp45I GTSAC 1 cut(s) 295
TspDTI ATGAA 5 cut(s) 56, 1217, 1254, 1262, 1400
TspRI CASTG 7 cut(s) 241, 487, 519, 529, 541, 1051, 1111
Van91I CCANNNNNTGG 2 cut(s) 332, 710
VneI GTGCAC 2 cut(s) 232, 273
VpaK11BI GGWCC 1 cut(s) 220
XapI RAATTY 2 cut(s) 1249, 1436
XceI RCATGY 2 cut(s) 273, 610
XcmI CCANNNNNNNNNTGG 1 cut(s) 214
XspI CTAG 2 cut(s) 584, 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.