Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0005033

Physical Location & Seq

Genomic Coordinates Reverse (-)

16991001 .. 16998360

Gene Structure 7360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g13380.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3123 bp

ATGGCTGATCGAAACCTGGCTGTGGTGAAGCCGATATGGATGAAGCAAGCGGAGGAGGCTAGGGTGAAGAGTGAGGCTGAGAAAGACGCTGCGGCGAAAGCCGCTTTCGAAGCCACATTCAAGGATGTGGACAAAAGCAAGGAGAAAGGGGCCGCGGCGGCCGGGTCTGATAGTGAATCAGAAGAGGCTGAGAACTTGGCCAACAAGCCGATCGGCCCGGTGGATGCTACAAAGTGCACTGCGGCCGGGGCCGGCATTGCGGGCGGGACTGCCTGTGCACCGTCTTCGTTTACGGTGGCGACTAAGGACTCTGATGGGAGGAAGGTTCCGAATGGCGGCGCGCAGATTAAGGTGAAGATTATGCCGGGATTGGGTGTTGGGGGTTCAGAGCAGGAAGGAATGGTGAAGGATATGGGTGACGGGACGTATACAGTAACTTATGTGGTTCCGAAACGAGGGAATTACATGGTGACCATTGAGTGTAATGGGAGAGCTATCATGGGTAGCCCCTTCCCTGTGTTCTTCAGTGCAGGTAGTACTAGTACTGGAGGGCTACTGGGATTGGCTCCTACGTCCACATTTCCAAATTTAGTCAACCAAACAATGCCTAACATGCCAAATTATTCAGGTTCTGTCTCAGGGGCATTTCCTGGATTATTGGGAATGATTCCTGGCATTGTTCCTGGTGCGTTAGGTGGGGCTATTTTACCAGGAATTGGAGCATCTCTTGGGGAAGTTTGTAGAGAATACCTTAATGGTCGGTGTGCCAAAGCCGATTGTAAGTTGAATCACCCACCTCACCAGCTGCTAATGACTGCATTGGCTGCAACAACCAATATGGGAAATGTTAGTCAAGTGCCAATGGCACCTTCTGCAGCTGCAATGGCTGCTGCTCAGGCAATTGTTGCTGCCCAGGCTCTTCAAGCCCATGCAGCTCAGCATGCACAGGCTCAGTCAAACAAAGACTCCTCTGGTTCACCTGACAAAGCTGGGAAGGCTGATGTTTTAAAGAGAACGCTTCAAGTTAGCAATCTTAGCCCACTTCTCACTGTGGAGCAGCTGAAACAACTTTTTAGCTTTTGTGGTACAGTTGTTGAATGTACCATCACTGATTCAAAGCATTTTGCTTATATAGAATACACCAAACCCGAAGAAGCAACTGCTGCTCTGGCATTGAATAGTATGGATGTTGGAGGCCGTCCTTTGAATGTTGAGATGGCAAAATCACTTCCTCAGAAATCTGCTATGAATTCTCAGATGGCTTCCTCGTCTTTGCCCATGGTGATGCAACAAGCTGTTGCAATGCAACAGATGCAGTTCCAGCAGGCTTTGCTTATGCAGCAAACTATGACTGCCCAACAGGCAGCTAACCGAGCTGCAACCATGAAGACAGCAACAGAGTTAGCTGCAGCCAGAGCAGCAGAAATAAGTAAGAAACTAAAAGCTGATGGAGTTGAAATTGAAGAGACTGAAACAAAAGAGAAAACTAGGTCTCCTTCACCTCGTGCAAGGTCAAAATCGAGATCGAGATCACCTATCAACTATCGCCGTAGGTGGAAGTCTCCCTCTTACTCTCCTCCACCTCGCTATGCAAGAGGACGTAGATCCAGATCCCCGTTCAGGTCACGCCATCATTCAATCTATGACAATGGCCGGCGGTCATACAGAGATTTTAGGAATGGCAGTGACAGAGGTAGAAGGCGGGATTCAGATGATTTTCAGTCATATGCCTCAAGGAGAAGGAGTAGGAGTGTTTCTCCTCGAAGAAAATCACATCGAGTTGATTCGTCATCACCCAAACATCGACGAGAACGTTCTCCACGTAGAGCGACCCGTGATGCATCTAGATCACCAGGTCATTATACGGGGAGTAAGTTATCTCCAAGAGGCGATGAAGACAAATCCAAGCACAGAAAACGTTCTAGGTCCAATTCTCCAGAGGATAAACATCTCTTAAATGACAAAAAAGATGAAACCCGCTATGAAACATCAAAGCATCGAGAAAGAAGGCGATCCAGGTCAGTTTCAGTGGAAGGTAAGCACCATAGAAAGCGGTCATCTCCAAGAAGTCTGGATGAAAACAAATCCAAACACCGGAGGCGGTCTAGGTCAAAATCTGTGGAAGTAAAGCCACGTGGCGCGGATGAAACTAGAGATCGTAAATTAAAACACCGTAGTGGAAGGCAGTCCAGGTCAAAATCTTTGGAAAGCAAGCGTCACTCTGATGAGAAAACTAGTGAACTGAGAGATGAAAAATCAAAACATCGTGATAGAAGACGTTCAAGGTCAAAATCTGTGGAAGGGAGGCGTCACTCGAAGGAGGTTGATGGAGGTAGGGATAAAAAATCCAAGCGTCGTGATAGAAGGCAATCGAGGTCAAGGTCCAGGTCATCATCTTTGGAACCTAAGCTTGACACAAGAGGGGAGTCATCCCCAAGAAGACTTGATGAACACAAATCGAAGCACAGAAGGCGGTCAAGGTCAAAATCTGCTGAAGGAAAGCAGCACCTCAATGATAGAGCAGATAAAAGTAGAAATGAAAAAGCAAAGCGGCATAGGAGAAGAAGATCCAGATCAATATCACTAGAACGTGAGCGTCATAGAGGAAGTAGGTTATCCCCAAGAAGTTCAGATGAAAATGATTCTAAGCAGAGGAGGCGACGCTCTAGGTCAGAATCTTCTGAAGGCAAACATCAAAGGTCTGAAAGAGATGAGAATGGTGATGATGAACTAAAGCATTATGAAGATGGCAATGAGGAATCAGGTTTTCTCACTAATTATTCAACCAAGAAACATAATGATCAGATGGTCATTTCAAATAAAGAGGAATTTGCATTGAATGGATCGCTGGGTAGGCTAGACGGTCGGGGTGTCTATGATGTTGACAGTGAAGGAGGCCCTGCGCTACAAACTTGTAGAGATGAATTGAGTAGACATGAAAATCTTGGAAAATCTGGTCTGGAATATCACAGTGATCATGACAAGTCAGCTAACGAGGATGATGTTTACAGAGCAGGCTCCAGGAAGGATTACAACAAGATGAAGTCTCGAGATAGAAGCTCTCTGATGTCTAAGGCGGATATGTTTTCTGATGACCCCAGTGCAGAAGAGGAAAACTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Filamin RRM_1

Protein Analysis

1041

Amino Acids

115.61

Weight (kDa)

10.17

Isoelectric Point (pI)

78.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Filamin	PF00630	73 - 171	3.2e-20	Filamin/ABP280 repeat
RRM_1	PF00076	342 - 402	9.3e-13	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23900 AT3G23900 AT3G23900 AT3G23900
fragaria_vesca	FvH4_4g13380 FvH4_4g13380
malus_domestica	MD04G1016500.v1.1
prunus_persica	Prupe.1G163200_v2.0.a1 Prupe.1G163200_v2.0.a1 Prupe.1G163200_v2.0.a1 Prupe.1G163200_v2.0.a1
pyrus_communis	pycom04g01250 pycom04g01260
rosa_chinensis	RchiOBHm_Chr4g0413751
rosa_laevigata	RLG00000008196
rosa_multiflora	Rmu_co7987260.1_g000001 Rmu_co8411523.1_g000001 Rmu_sc0004133.1_g000004 Rmu_sc0008092.1_g000014
rosa_roxburghii	Rroxscaffold_5G00357670
rosa_rugosa	Rorug04G0122900 Rorug04G0123000 Rorug04G0123100 Rorug04G0123100 Rorug04G0123100
rosa_samantha	Rh4AG182400 Rh4BG181500 Rh4CG193600 Rh4DG178000
rosa_wichuraiana	Rw4G015260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	521
AccB1I	GGYRCC	1 cut(s)	865
AccB7I	CCANNNNNTGG	1 cut(s)	716
AccI	GTMKAC	2 cut(s)	428, 2932
AccII	CGCG	3 cut(s)	155, 341, 2141
AclI	AACGTT	2 cut(s)	1813, 1918
AclWI	GGATC	5 cut(s)	1599, 1605, 2007, 2562, 2851
AcoI	YGGCCR	4 cut(s)	159, 198, 243, 1651
AcsI	RAATTY	3 cut(s)	586, 1249, 2828
AcuI	CTGAAG	3 cut(s)	508, 2514, 2703
AcvI	CACGTG	1 cut(s)	2135
AcyI	GRCGYC	1 cut(s)	2308
AdeI	CACNNNGTG	1 cut(s)	1505
AfaI	GTAC	4 cut(s)	538, 544, 1087, 1102
AfiI	CCNNNNNNNGG	7 cut(s)	22, 335, 371, 455, 716, 1620, 2094
AhlI	ACTAGT	2 cut(s)	539, 2234
AjuI	GAANNNNNNNTTGG	2 cut(s)	853, 885
AleI	CACNNNNGTG	1 cut(s)	2175
Alw21I	GWGCWC	2 cut(s)	239, 280
Alw26I	GTCTC	5 cut(s)	640, 1460, 1497, 1566, 3051
Alw44I	GTGCAC	2 cut(s)	235, 276
AlwI	GGATC	5 cut(s)	1599, 1605, 2007, 2562, 2851
AlwNI	CAGNNNCTG	1 cut(s)	632
Ama87I	CYCGRG	1 cut(s)	3048
AoxI	GGCC	9 cut(s)	150, 159, 198, 214, 243, 249, 1195, 1651, 2896
ApaLI	GTGCAC	2 cut(s)	235, 276
ApoI	RAATTY	3 cut(s)	586, 1249, 2828
Asp700I	GAANNNNTTC	2 cut(s)	1918, 2278
AspLEI	GCGC	4 cut(s)	341, 343, 2141, 2905
AspS9I	GGNCC	6 cut(s)	150, 215, 249, 1926, 2382, 2897
AsuC2I	CCSGG	4 cut(s)	163, 218, 247, 366
AsuII	TTCGAA	1 cut(s)	108
AvaI	CYCGRG	1 cut(s)	3048
AvaII	GGWCC	2 cut(s)	1926, 2382
BaeGI	GKGCMC	2 cut(s)	239, 280
BaeI	ACNNNNGTAYC	2 cut(s)	1077, 1110
BalI	TGGCCA	1 cut(s)	200
BanI	GGYRCC	1 cut(s)	865
BauI	CACGAG	1 cut(s)	1503
BbrPI	CACGTG	1 cut(s)	2135
BbsI	GAAGAC	5 cut(s)	276, 1394, 1902, 2281, 2446
Bbv12I	GWGCWC	2 cut(s)	239, 280
BccI	CCATC	9 cut(s)	308, 1112, 1210, 1252, 1442, 1638, 2321, 2741, 2800
BceAI	ACGGC	2 cut(s)	1182, 1533
BcgI	CGANNNNNNTGC	2 cut(s)	267, 301
BclI	TGATCA	2 cut(s)	2800, 2974
BcnI	CCSGG	4 cut(s)	163, 218, 247, 366
BcoDI	GTCTC	5 cut(s)	640, 1460, 1497, 1566, 3051
BcuI	ACTAGT	2 cut(s)	539, 2234
BfmI	CTRYAG	2 cut(s)	873, 1407
BfuAI	ACCTGC	1 cut(s)	521
BglI	GCCNNNNNGGC	2 cut(s)	158, 1361
BlpI	GCTNAGC	1 cut(s)	936
BmcAI	AGTACT	2 cut(s)	538, 544
Bme18I	GGWCC	2 cut(s)	1926, 2382
BmeT110I	CYCGRG	1 cut(s)	3048
BmgT120I	GGNCC	6 cut(s)	150, 215, 249, 1926, 2382, 2897
BmiI	GGNNCC	8 cut(s)	151, 250, 327, 447, 567, 867, 2403, 3019
BmrI	ACTGGG	2 cut(s)	566, 3093
BmsI	GCATC	7 cut(s)	214, 731, 1275, 1302, 1828, 1850, 2005
BmuI	ACTGGG	2 cut(s)	566, 3093
BpiI	GAAGAC	5 cut(s)	276, 1394, 1902, 2281, 2446
BplI	GAGNNNNNCTC	2 cut(s)	1741, 1773
BpmI	CTGGAG	3 cut(s)	567, 1920, 3004
Bpu10I	CCTNAGC	2 cut(s)	894, 2406
Bpu1102I	GCTNAGC	1 cut(s)	936
Bpu14I	TTCGAA	1 cut(s)	108
BpuEI	CTTGAG	1 cut(s)	1717
BpuMI	CCSGG	4 cut(s)	163, 218, 247, 366
BsaAI	YACGTR	2 cut(s)	1823, 2135
BsaBI	GATNNNNATC	5 cut(s)	1528, 1609, 1947, 2572, 2578
BsaHI	GRCGYC	1 cut(s)	2308
BsaI	GGTCTC	1 cut(s)	1497
BsaJI	CCNNGG	4 cut(s)	153, 246, 912, 1278
BsaWI	WCCGGW	1 cut(s)	2094
BsaXI	ACNNNNNCTCC	8 cut(s)	950, 980, 1477, 1507, 1729, 1735, 1759, 1765
Bsc4I	CCNNNNNNNGG	7 cut(s)	22, 335, 371, 455, 716, 1620, 2094
Bse118I	RCCGGY	2 cut(s)	251, 1653
Bse1I	ACTGG	3 cut(s)	550, 561, 3099
Bse3DI	GCAATG	4 cut(s)	255, 888, 1308, 2758
Bse8I	GATNNNNATC	5 cut(s)	1528, 1609, 1947, 2572, 2578
BseDI	CCNNGG	4 cut(s)	153, 246, 912, 1278
BseGI	GGATG	8 cut(s)	45, 130, 229, 1192, 2080, 2149, 2429, 3004
BseJI	GATNNNNATC	5 cut(s)	1528, 1609, 1947, 2572, 2578
BseLI	CCNNNNNNNGG	7 cut(s)	22, 335, 371, 455, 716, 1620, 2094
BseMI	GCAATG	4 cut(s)	255, 888, 1308, 2758
BseMII	CTCAG	9 cut(s)	69, 180, 651, 908, 950, 965, 1247, 1268, 2234
BseNI	ACTGG	3 cut(s)	550, 561, 3099
BsePI	GCGCGC	1 cut(s)	339
BseRI	GAGGAG	5 cut(s)	68, 958, 1566, 1749, 2668
BseSI	GKGCMC	2 cut(s)	239, 280
BseX3I	CGGCCG	2 cut(s)	159, 243
BseYI	CCCAGC	2 cut(s)	989, 2848
BsgI	GTGCAG	2 cut(s)	549, 3123
Bsh1236I	CGCG	3 cut(s)	155, 341, 2141
Bsh1285I	CGRYCG	4 cut(s)	162, 213, 246, 2866
BshFI	GGCC	9 cut(s)	152, 161, 200, 216, 245, 251, 1197, 1653, 2898
BshNI	GGYRCC	1 cut(s)	865
BsiEI	CGRYCG	4 cut(s)	162, 213, 246, 2866
BsiHKAI	GWGCWC	2 cut(s)	239, 280
BsiHKCI	CYCGRG	1 cut(s)	3048
BsiSI	CCGG	7 cut(s)	162, 218, 246, 252, 365, 1654, 2095
BslFI	GGGAC	2 cut(s)	280, 436
BslI	CCNNNNNNNGG	7 cut(s)	22, 335, 371, 455, 716, 1620, 2094
BsmAI	GTCTC	5 cut(s)	640, 1460, 1497, 1566, 3051
BsmFI	GGGAC	2 cut(s)	280, 436
BsnI	GGCC	9 cut(s)	152, 161, 200, 216, 245, 251, 1197, 1653, 2898
Bso31I	GGTCTC	1 cut(s)	1497
BsoBI	CYCGRG	1 cut(s)	3048
Bsp119I	TTCGAA	1 cut(s)	108
Bsp1286I	GDGCHC	2 cut(s)	239, 280
Bsp1720I	GCTNAGC	1 cut(s)	936
Bsp19I	CCATGG	1 cut(s)	1278
BspANI	GGCC	9 cut(s)	152, 161, 200, 216, 245, 251, 1197, 1653, 2898
BspCNI	CTCAG	9 cut(s)	70, 181, 650, 907, 949, 964, 1246, 1267, 2235
BspFNI	CGCG	3 cut(s)	155, 341, 2141
BspHI	TCATGA	1 cut(s)	2977
BspLI	GGNNCC	8 cut(s)	151, 250, 327, 447, 567, 867, 2403, 3019
BspMAI	CTGCAG	2 cut(s)	877, 1411
BspMI	ACCTGC	1 cut(s)	521
BspPI	GGATC	5 cut(s)	1599, 1605, 2007, 2562, 2851
BspQI	GCTCTTC	1 cut(s)	924
BspT104I	TTCGAA	1 cut(s)	108
BspT107I	GGYRCC	1 cut(s)	865
BspTNI	GGTCTC	1 cut(s)	1497
BsrDI	GCAATG	4 cut(s)	255, 888, 1308, 2758
BsrFI	RCCGGY	2 cut(s)	251, 1653
BsrI	ACTGG	3 cut(s)	550, 561, 3099
BssAI	RCCGGY	2 cut(s)	251, 1653
BssECI	CCNNGG	4 cut(s)	153, 246, 912, 1278
BssHII	GCGCGC	1 cut(s)	339
BssNAI	GTATAC	1 cut(s)	429
BssNI	GRCGYC	1 cut(s)	2308
BssSI	CACGAG	1 cut(s)	1503
BssT1I	CCWWGG	1 cut(s)	1278
Bst1107I	GTATAC	1 cut(s)	429
Bst2BI	CACGAG	1 cut(s)	1503
Bst4CI	ACNGT	9 cut(s)	282, 295, 433, 1051, 1090, 2174, 2864, 2888, 2972
Bst6I	CTCTTC	5 cut(s)	62, 177, 924, 1458, 3102
BstACI	GRCGYC	1 cut(s)	2308
BstAPI	GCANNNNNTGC	7 cut(s)	824, 872, 887, 905, 1163, 1312, 1330
BstBAI	YACGTR	2 cut(s)	1823, 2135
BstBI	TTCGAA	1 cut(s)	108
BstC8I	GCNNGC	9 cut(s)	48, 253, 262, 341, 942, 1326, 1655, 2213, 3016
BstDSI	CCRYGG	2 cut(s)	153, 1278
BstEII	GGTNACC	1 cut(s)	469
BstF5I	GGATG	8 cut(s)	45, 130, 229, 1192, 2080, 2149, 2429, 3004
BstFNI	CGCG	3 cut(s)	155, 341, 2141
BstHHI	GCGC	4 cut(s)	341, 343, 2141, 2905
BstMAI	GTCTC	5 cut(s)	640, 1460, 1497, 1566, 3051
BstMCI	CGRYCG	4 cut(s)	162, 213, 246, 2866
BstNSI	RCATGY	2 cut(s)	616, 944
BstPI	GGTNACC	1 cut(s)	469
BstSFI	CTRYAG	2 cut(s)	873, 1407
BstSLI	GKGCMC	2 cut(s)	239, 280
BstUI	CGCG	3 cut(s)	155, 341, 2141
BstV2I	GAAGAC	5 cut(s)	276, 1394, 1902, 2281, 2446
BstX2I	RGATCY	3 cut(s)	1604, 1610, 2567
BstYI	RGATCY	3 cut(s)	1604, 1610, 2567
BstZ17I	GTATAC	1 cut(s)	429
BstZI	CGGCCG	2 cut(s)	159, 243
BsuRI	GGCC	9 cut(s)	152, 161, 200, 216, 245, 251, 1197, 1653, 2898
BtgI	CCRYGG	2 cut(s)	153, 1278
BtgZI	GCGATG	1 cut(s)	1905
BtsCI	GGATG	8 cut(s)	45, 130, 229, 1192, 2080, 2149, 2429, 3004
BtsI	GCAGTG	2 cut(s)	237, 1690
BtsIMutI	CAGTG	9 cut(s)	237, 532, 1047, 1107, 1690, 2034, 2893, 2977, 3106
BveI	ACCTGC	1 cut(s)	521
Cac8I	GCNNGC	9 cut(s)	48, 253, 262, 341, 942, 1326, 1655, 2213, 3016
CaiI	CAGNNNCTG	1 cut(s)	632
CciI	TCATGA	1 cut(s)	2977
CfoI	GCGC	4 cut(s)	341, 343, 2141, 2905
Cfr10I	RCCGGY	2 cut(s)	251, 1653
Cfr13I	GGNCC	6 cut(s)	150, 215, 249, 1926, 2382, 2897
Cfr42I	CCGCGG	1 cut(s)	156
CseI	GACGC	6 cut(s)	95, 2204, 2297, 2342, 2585, 2670
CsiI	ACCWGGT	1 cut(s)	1852
Csp6I	GTAC	4 cut(s)	537, 543, 1086, 1101
CspCI	CAANNNNNGTGG	4 cut(s)	2100, 2135, 2277, 2312
CviAII	CATG	9 cut(s)	466, 499, 613, 929, 941, 1279, 1384, 2936, 2978
CviQI	GTAC	4 cut(s)	537, 543, 1086, 1101
DraI	TTTAAA	1 cut(s)	1008
DraIII	CACNNNGTG	1 cut(s)	1505
EaeI	YGGCCR	4 cut(s)	159, 198, 243, 1651
EagI	CGGCCG	2 cut(s)	159, 243
Eam1104I	CTCTTC	5 cut(s)	62, 177, 924, 1458, 3102
EarI	CTCTTC	5 cut(s)	62, 177, 924, 1458, 3102
EciI	GGCGGA	1 cut(s)	3092
EclXI	CGGCCG	2 cut(s)	159, 243
Eco130I	CCWWGG	1 cut(s)	1278
Eco31I	GGTCTC	1 cut(s)	1497
Eco47I	GGWCC	2 cut(s)	1926, 2382
Eco52I	CGGCCG	2 cut(s)	159, 243
Eco57I	CTGAAG	3 cut(s)	508, 2514, 2703
Eco72I	CACGTG	1 cut(s)	2135
Eco88I	CYCGRG	1 cut(s)	3048
Eco91I	GGTNACC	1 cut(s)	469
EcoO109I	RGGNCCY	1 cut(s)	2897
EcoO65I	GGTNACC	1 cut(s)	469
EcoRI	GAATTC	1 cut(s)	1249
EcoT14I	CCWWGG	1 cut(s)	1278
EcoT22I	ATGCAT	1 cut(s)	1843
ErhI	CCWWGG	1 cut(s)	1278
FaeI	CATG	9 cut(s)	469, 502, 616, 932, 944, 1282, 1387, 2939, 2981
FaqI	GGGAC	2 cut(s)	280, 436
FatI	CATG	9 cut(s)	465, 498, 612, 928, 940, 1278, 1383, 2935, 2977
FauI	CCCGC	4 cut(s)	253, 257, 1695, 1985
FauNDI	CATATG	1 cut(s)	1726
FbaI	TGATCA	2 cut(s)	2800, 2974
FblI	GTMKAC	2 cut(s)	428, 2932
FokI	GGATG	8 cut(s)	52, 137, 236, 1199, 2087, 2156, 2416, 3011
GlaI	GCGC	4 cut(s)	340, 342, 2140, 2904
GsaI	CCCAGC	2 cut(s)	993, 2852
GsuI	CTGGAG	3 cut(s)	567, 1920, 3004
HaeIII	GGCC	9 cut(s)	152, 161, 200, 216, 245, 251, 1197, 1653, 2898
HapII	CCGG	7 cut(s)	162, 218, 246, 252, 365, 1654, 2095
HgaI	GACGC	6 cut(s)	95, 2204, 2297, 2342, 2585, 2670
HhaI	GCGC	4 cut(s)	341, 343, 2141, 2905
Hin1I	GRCGYC	1 cut(s)	2308
Hin1II	CATG	9 cut(s)	469, 502, 616, 932, 944, 1282, 1387, 2939, 2981
Hin6I	GCGC	4 cut(s)	339, 341, 2139, 2903
HinP1I	GCGC	4 cut(s)	339, 341, 2139, 2903
HincII	GTYRAC	2 cut(s)	595, 2884
HindII	GTYRAC	2 cut(s)	595, 2884
HindIII	AAGCTT	1 cut(s)	2408
HpaII	CCGG	7 cut(s)	162, 218, 246, 252, 365, 1654, 2095
Hpy99I	CGWCG	3 cut(s)	1809, 2358, 2664
HpyCH4III	ACNGT	9 cut(s)	282, 295, 433, 1051, 1090, 2174, 2864, 2888, 2972
HpyCH4IV	ACGT	9 cut(s)	425, 572, 1600, 1813, 1822, 1918, 2134, 2278, 2590
HpySE526I	ACGT	9 cut(s)	425, 572, 1600, 1813, 1822, 1918, 2134, 2278, 2590
Hsp92I	GRCGYC	1 cut(s)	2308
Hsp92II	CATG	9 cut(s)	469, 502, 616, 932, 944, 1282, 1387, 2939, 2981
HspAI	GCGC	4 cut(s)	339, 341, 2139, 2903
KroI	GCCGGC	2 cut(s)	251, 1653
KroNI	GCCGGC	2 cut(s)	253, 1655
Ksp22I	TGATCA	2 cut(s)	2800, 2974
KspI	CCGCGG	1 cut(s)	156
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	4 cut(s)	571, 719, 1054, 3023
LweI	GCATC	7 cut(s)	214, 731, 1275, 1302, 1828, 1850, 2005
MabI	ACCWGGT	1 cut(s)	1852
MaeII	ACGT	9 cut(s)	425, 572, 1600, 1813, 1822, 1918, 2134, 2278, 2590
MaeIII	GTNAC	7 cut(s)	416, 433, 469, 1623, 1685, 2216, 2309
MfeI	CAATTG	1 cut(s)	900
MflI	RGATCY	3 cut(s)	1604, 1610, 2567
MhlI	GDGCHC	2 cut(s)	239, 280
MlsI	TGGCCA	1 cut(s)	200
MluNI	TGGCCA	1 cut(s)	200
MlyI	GAGTC	3 cut(s)	302, 959, 2435
MmeI	TCCRAC	1 cut(s)	1171
Mox20I	TGGCCA	1 cut(s)	200
Mph1103I	ATGCAT	1 cut(s)	1843
MroNI	GCCGGC	2 cut(s)	251, 1653
MroXI	GAANNNNTTC	2 cut(s)	1918, 2278
MscI	TGGCCA	1 cut(s)	200
MseI	TTAA	5 cut(s)	348, 753, 1007, 1955, 2165
MslI	CAYNNNNRTG	4 cut(s)	1283, 2175, 2223, 2511
Msp20I	TGGCCA	1 cut(s)	200
MspA1I	CMGCKG	4 cut(s)	155, 805, 878, 1060
MspI	CCGG	7 cut(s)	162, 218, 246, 252, 365, 1654, 2095
MunI	CAATTG	1 cut(s)	900
MvnI	CGCG	3 cut(s)	155, 341, 2141
NaeI	GCCGGC	2 cut(s)	253, 1655
NciI	CCSGG	4 cut(s)	163, 218, 247, 366
NcoI	CCATGG	1 cut(s)	1278
NdeI	CATATG	1 cut(s)	1726
NgoMIV	GCCGGC	2 cut(s)	251, 1653
NlaIII	CATG	9 cut(s)	469, 502, 616, 932, 944, 1282, 1387, 2939, 2981
NlaIV	GGNNCC	8 cut(s)	151, 250, 327, 447, 567, 867, 2403, 3019
NmuCI	GTSAC	6 cut(s)	416, 469, 1623, 1685, 2216, 2309
NsiI	ATGCAT	1 cut(s)	1843
NspI	RCATGY	2 cut(s)	616, 944
NspV	TTCGAA	1 cut(s)	108
OliI	CACNNNNGTG	1 cut(s)	2175
PaeI	GCATGC	1 cut(s)	944
PaeR7I	CTCGAG	1 cut(s)	3048
PagI	TCATGA	1 cut(s)	2977
PauI	GCGCGC	1 cut(s)	339
PciSI	GCTCTTC	1 cut(s)	924
PcsI	WCGNNNNNNNCGW	2 cut(s)	1810, 1819
PdiI	GCCGGC	2 cut(s)	253, 1655
PdmI	GAANNNNTTC	2 cut(s)	1918, 2278
PfeI	GAWTC	9 cut(s)	176, 667, 787, 1112, 1706, 1784, 2642, 2675, 2759
PflMI	CCANNNNNTGG	1 cut(s)	716
PfoI	TCCNGGA	2 cut(s)	649, 3020
Ple19I	CGATCG	1 cut(s)	213
PleI	GAGTC	3 cut(s)	302, 959, 2434
PmaCI	CACGTG	1 cut(s)	2135
PmlI	CACGTG	1 cut(s)	2135
PpsI	GAGTC	3 cut(s)	302, 959, 2434
Ppu21I	YACGTR	2 cut(s)	1823, 2135
Psp1406I	AACGTT	2 cut(s)	1813, 1918
PspCI	CACGTG	1 cut(s)	2135
PspEI	GGTNACC	1 cut(s)	469
PspFI	CCCAGC	2 cut(s)	989, 2848
PspN4I	GGNNCC	8 cut(s)	151, 250, 327, 447, 567, 867, 2403, 3019
PspPI	GGNCC	6 cut(s)	150, 215, 249, 1926, 2382, 2897
PstI	CTGCAG	2 cut(s)	877, 1411
PstNI	CAGNNNCTG	1 cut(s)	632
PsuI	RGATCY	3 cut(s)	1604, 1610, 2567
PteI	GCGCGC	1 cut(s)	339
PvuI	CGATCG	1 cut(s)	213
PvuII	CAGCTG	3 cut(s)	805, 878, 1060
RsaI	GTAC	4 cut(s)	538, 544, 1087, 1102
RsaNI	GTAC	4 cut(s)	537, 543, 1086, 1101
RseI	CAYNNNNRTG	4 cut(s)	1283, 2175, 2223, 2511
SacII	CCGCGG	1 cut(s)	156
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	5 cut(s)	348, 753, 1007, 1955, 2165
Sau96I	GGNCC	6 cut(s)	150, 215, 249, 1926, 2382, 2897
ScaI	AGTACT	2 cut(s)	538, 544
SchI	GAGTC	3 cut(s)	302, 959, 2435
SduI	GDGCHC	2 cut(s)	239, 280
SexAI	ACCWGGT	1 cut(s)	1852
SfaNI	GCATC	7 cut(s)	214, 731, 1275, 1302, 1828, 1850, 2005
SfcI	CTRYAG	2 cut(s)	873, 1407
SfiI	GGCCNNNNNGGCC	1 cut(s)	158
Sfr274I	CTCGAG	1 cut(s)	3048
Sfr303I	CCGCGG	1 cut(s)	156
SfuI	TTCGAA	1 cut(s)	108
SgrBI	CCGCGG	1 cut(s)	156
SinI	GGWCC	2 cut(s)	1926, 2382
SlaI	CTCGAG	1 cut(s)	3048
SmiMI	CAYNNNNRTG	4 cut(s)	1283, 2175, 2223, 2511
SmlI	CTYRAG	2 cut(s)	1732, 3048
SmoI	CTYRAG	2 cut(s)	1732, 3048
SpeI	ACTAGT	2 cut(s)	539, 2234
SphI	GCATGC	1 cut(s)	944
StyI	CCWWGG	1 cut(s)	1278
TaaI	ACNGT	9 cut(s)	282, 295, 433, 1051, 1090, 2174, 2864, 2888, 2972
TaiI	ACGT	9 cut(s)	428, 575, 1603, 1816, 1825, 1921, 2137, 2281, 2593
TatI	WGTACW	2 cut(s)	536, 542
TauI	GCSGC	8 cut(s)	95, 104, 155, 158, 161, 245, 339, 2554
TfiI	GAWTC	9 cut(s)	176, 667, 787, 1112, 1706, 1784, 2642, 2675, 2759
Tru1I	TTAA	5 cut(s)	348, 753, 1007, 1955, 2165
Tru9I	TTAA	5 cut(s)	348, 753, 1007, 1955, 2165
TscAI	CASTG	9 cut(s)	244, 532, 1054, 1114, 1690, 2034, 2893, 2977, 3106
TseFI	GTSAC	6 cut(s)	416, 469, 1623, 1685, 2216, 2309
Tsp45I	GTSAC	6 cut(s)	416, 469, 1623, 1685, 2216, 2309
TspRI	CASTG	9 cut(s)	244, 532, 1054, 1114, 1690, 2034, 2893, 2977, 3106
Van91I	CCANNNNNTGG	1 cut(s)	716
VneI	GTGCAC	2 cut(s)	235, 276
VpaK11BI	GGWCC	2 cut(s)	1926, 2382
XapI	RAATTY	3 cut(s)	586, 1249, 2828
XbaI	TCTAGA	1 cut(s)	1844
XceI	RCATGY	2 cut(s)	616, 944
XhoI	CTCGAG	1 cut(s)	3048
XmiI	GTMKAC	2 cut(s)	428, 2932
XmnI	GAANNNNTTC	2 cut(s)	1918, 2278
ZrmI	AGTACT	2 cut(s)	538, 544
Zsp2I	ATGCAT	1 cut(s)	1843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.