MD04G1016500.v1.1

Filamin-type immunoglobulin domains

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
1775075 .. 1781998
6924 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1016500.v1.1.491

Sequence Viewer

Length: 3156 bp
ATGGCTGATCGAAATCTTGCACTTGTTAAGCCAGTATGGATGAAGCAAGCCGAAGAGGCGAGGAGCAAGAGCGAGGCTGAGAAAGCCGCAGCGGCAAAAGCTGCTTTTGAAGCCACATTCAAAGATGTGGATAAGAATCGAGAGAAAGAAGTGGTGGCTGGATCAGATAGTGAATCTGAAGAAGCTGAGGACCTGGCGAACAAGCCCATTGGACCGGTGGACCCGGCAAAGTGCACTGCAGCCGGGGCTGGGATCGCGGGTGGTACAGCATGTGCGCCTTCTTCGTTTATGGTAGTGACTAAAGACTCTGATGGAAGGAAGGTTCCAAATGGTGGGGTGCAGATTAAGGTGAAAGTAGTGCCTGGAGTGGGAGTTGGGGGATCAGAGCAAGAAGGGATGGTGAAGGATATGGGTGATGGGACGTACACAGTTACTTATGTGGTGCCAAAACGAGGGAATTATATGGTGAGTGTGGAGTGCAGTGGTAAACCCATCATGGGTAGCCCATTCCCAGTGTTCTTCAGTGCAGGTTCTAGTGCTGGAGGACTGCTGGGATTGGCTCCGCCGTCCACATTTCCTAATCTAGTTAACCAAACCATGCCTAACATGCCAAATTATTCAGCTTCTGTTTCAGGGGCATTCCCTGGACTGTTGGGAATGATTCCAGGCATTGTTCCTGGTGCTTCAGGAGGGGCTATATTGCCAGGAATTGGAGCATCTCTTGGGGAAGTTTGTAGAGACTACCTTAGTGGTAGGTGCGCCAAAATTGATTGTAAGCTGAACCACCCGCCTCACAATCTGCTAATGACTGCGTTAGCTGCAACCACCTCTATGGGAAATGTTAGCCAAGTGCCTATGGCACCTTCTGCAGCTGCAATGGCTGCTGCTCAGGCAATTGTTGCTGCCCAGGCTCTTCAAGCCCATGCTGCTCAGGTGCAAGCACAAGCTCAGTCAAACAAAGACTCTTCTGGTTCACTTGACAAAGCTGGGAAGGCTGATGTGCTGAAGAAGACGGTTCAAGTCAGCAATCTTAGCCCACTTCTCACTGTGGAACAGCTGAAAGAACTTTTTAGCTATTGTGGCACCGTTGTAGAATGTACCATTGCTGACTCAAAGCATTTTGCATATATAGAATACTCAAAACCTGAAGAAGCAACTGCTGCTTTGCAATTGAATAATATGGATGTTGGAGGCCGTCCTATGAATGTTGAGATGGCAAAATCACTTCCTCAGCAACCAGCTGCTATGAATTCCTCAATGGCTTCATCATCTCTTCCTATGGTGATGCAGCAAGCTGTTGCCATGCAACAGATGCAATTCCAGCAGGCTTTGCTTATGCAACAAACTATGACCGCCCAACAGGCAGCCAACCGAGCTGCAACCATGAAGACAGCAACAGAGTTAGCTGCTGCCAGAGCAGCAGAAATAAGTAAGAAATTTAAAGCTGATGGAGTAGAAATTGAAGAGAAGGAAACAAAAGAGAAATCTAGGTCTCCATCACCATCTCGTGCAAGGTCAAAATCCAGATCCAGATCACCTATAAATTATCGCCGAAGGCGGAAGTCTCCTTCTTACTCTCCTCCATATCGCTATCCAAGAGATCGTAGATCCAGATCCCCTTTGAGATCACGCCACTATTCAAGCTATGATAATGAACGCAGGCTATATAGAGACATTAGGAATGATGGTGACAGAACTAGAAGGCGGGATTCAGATAGATCACATGATCATCATTTTTCTACGTCACGGAGAAATAGGAGTAGGAGTGTTAGTCCTAGAACAAGAAAAACACGAGTTGATTCGGTGTCACCCAAACATCGACGAGAAAGTTCTCCACGTAGAACTCGAGCTGCGTCTAGATCACCTGGTCATCATACAGGAAGTAAGTCTTCTCCAAGAAAACGCTCAAGGTCAAAGTCTTCAGAAGGAAAACATCACTTAAGTGACAAAAAAGATGACACCCACTATGAAAAAGAAAAACATGGAGAAAGAAGGCGATCAAGGTCAGTGTCTACTGAAGGTAAGGGACATAGAAGACGGTTATCACCAAGAAGTCCGGATGAAAAAAAATCCAGACAGAGAAGGCGGTCTAGGTCAAAATCTTTGGAAGTCAAGTACCGCTCTAATGAGAAATCGGACGAAACAAGAGATGAAAAATTAAAACATCGTAGTAGAAGGCGGTCCAGGTCAAAATCTTTGGAAGATAAGCACCGCTCTGATGAGAAAACAAATGAAATAGATGAAAAATCAAAGTATCGTGATAGAAGACGTTCTAGATCAAAATCTGTGGAAGGGAAGCATCACTTGAAGGAGTTGGGCGAAGGTAGGGATAAAAGATCAAAGCATTGTGATAGAAGGCGATCCCGGTCAGTATCTGTGGAGCCTAAGCACGACAGAAGACGTGGGTCATCCCCAAGAAGCTTGGATGACAATAAAGTGAAGCACAGAAGGCGGTCAAGGTCAAAGTCTGCTGAAGGGAAGCATCGCTCCAATGATAGGGCATATAAAAGTAGAGACGAAAAAGAAAAGAGTCATAGGAGAAGACGGTCCGGGTCTACATCTGTGGAACCTAAGCATCATAGAGGAAGTATGTTATCCCCAAGAAGTACGGATGGAAAGAAATCAAAACACAGAAGAAGGCGCTCTAGGTCAGAATCTTCTGAAGGCAAGCATCCAGCTAGTTGTGGAAGGGATGAGAATGGTGCTGACAAATCAGAGTATCATGAAGATGGCAATGAGAAACCAAGTTCGGTGGTGAAAGATTCAACAAAGAAAATTGATGATGGGGTGGTTATTTCAGCGGAAGAGGACTTGGACTTGAAGGAATCAATGCGAAATATGAGAACTGAAGATATTCCTCATATGAAAAAACATGGTTTTGTGCAAGATCTTGATAGTGAACGAACTTCTAGAGTCTCGTTAAATGTGGAGGAAAGCAAAGTGGAAGTGTCCATCACTGAGAATCTAGCACTTGGAACATCTGGACTGGAAAATCAAATTGGTTGTGAAAAGTTAACTGATGCAGATGATGTTTGCAGAACTGACTCCGGAAAGGATTACATCACAGTGAAGGTTCAGAAGAGAAACTCCCTGATACCTGATGCAGATAACGCAGATATGTTTTCTGATGACACCATTGCAGAAGAGAACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1052

Amino Acids

116.45

Weight (kDa)

9.94

Isoelectric Point (pI)

74.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Filamin PF00630 72 - 170 2.4e-20 Filamin/ABP280 repeat
RRM_1 PF00076 341 - 401 4.9e-13 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 518
AccB1I GGYRCC 3 cut(s) 442, 859, 1082
AccB7I CCANNNNNTGG 2 cut(s) 332, 710
AccBSI CCGCTC 2 cut(s) 2121, 2214
AccI GTMKAC 2 cut(s) 2012, 2555
AccII CGCG 1 cut(s) 257
AccIII TCCGGA 2 cut(s) 2056, 3047
AclWI GGATC 7 cut(s) 169, 260, 388, 1521, 1602, 1608, 2355
AcsI RAATTY 2 cut(s) 1249, 1436
AfaI GTAC 5 cut(s) 265, 425, 1099, 2117, 2608
AfiI CCNNNNNNNGG 7 cut(s) 249, 332, 368, 452, 497, 710, 2496
AflII CTTAAG 1 cut(s) 1939
AgeI ACCGGT 1 cut(s) 214
AjiI CACGTC 1 cut(s) 2402
AjnI CCWGG 9 cut(s) 192, 361, 643, 664, 676, 703, 906, 1864, 2183
AjuI GAANNNNNNNTTGG 2 cut(s) 2982, 3014
AleI CACNNNNGTG 1 cut(s) 1941
AloI GAACNNNNNNTCC 2 cut(s) 306, 338
Alw21I GWGCWC 1 cut(s) 236
Alw26I GTCTC 6 cut(s) 732, 1497, 1569, 1665, 2508, 2920
Alw44I GTGCAC 1 cut(s) 232
AlwI GGATC 7 cut(s) 169, 260, 388, 1521, 1602, 1608, 2355
AlwNI CAGNNNCTG 2 cut(s) 626, 2375
Ama87I CYCGRG 1 cut(s) 1845
Aor13HI TCCGGA 2 cut(s) 2056, 3047
AoxI GGCC 1 cut(s) 1192
ApaLI GTGCAC 1 cut(s) 232
ApoI RAATTY 2 cut(s) 1249, 1436
AsiGI ACCGGT 1 cut(s) 214
Asp700I GAANNNNTTC 2 cut(s) 2269, 2853
AspLEI GCGC 3 cut(s) 277, 761, 2643
AspS9I GGNCC 5 cut(s) 190, 212, 220, 2181, 2547
AsuC2I CCSGG 4 cut(s) 224, 244, 2365, 2551
AvaI CYCGRG 1 cut(s) 1845
AvaII GGWCC 5 cut(s) 190, 212, 220, 2181, 2547
BaeGI GKGCMC 1 cut(s) 236
BanI GGYRCC 3 cut(s) 442, 859, 1082
BauI CACGAG 2 cut(s) 1506, 1791
BbsI GAAGAC 8 cut(s) 1016, 1394, 1881, 1911, 2041, 2272, 2404, 2548
Bbv12I GWGCWC 1 cut(s) 236
BbvCI CCTCAGC 2 cut(s) 186, 1230
BceAI ACGGC 2 cut(s) 550, 1179
BciT130I CCWGG 9 cut(s) 194, 363, 645, 666, 678, 705, 908, 1866, 2185
BclI TGATCA 1 cut(s) 1726
BcnI CCSGG 4 cut(s) 224, 244, 2365, 2551
BcoDI GTCTC 6 cut(s) 732, 1497, 1569, 1665, 2508, 2920
BfmI CTRYAG 2 cut(s) 237, 867
BfoI RGCGCY 1 cut(s) 2644
BfrI CTTAAG 1 cut(s) 1939
BfuAI ACCTGC 1 cut(s) 518
BglI GCCNNNNNGGC 3 cut(s) 56, 92, 1361
BglII AGATCT 1 cut(s) 2887
Bme18I GGWCC 5 cut(s) 190, 212, 220, 2181, 2547
BmeT110I CYCGRG 1 cut(s) 1845
BmgBI CACGTC 1 cut(s) 2402
BmgT120I GGNCC 5 cut(s) 190, 212, 220, 2181, 2547
BmiI GGNNCC 8 cut(s) 222, 324, 444, 561, 861, 1084, 2382, 2568
BmrI ACTGGG 1 cut(s) 506
BmsI GCATC 9 cut(s) 725, 1275, 1302, 2308, 2491, 2584, 2680, 3010, 3091
BmuI ACTGGG 1 cut(s) 506
BoxI GACNNNNGTC 1 cut(s) 2404
BpiI GAAGAC 8 cut(s) 1016, 1394, 1881, 1911, 2041, 2272, 2404, 2548
BpmI CTGGAG 2 cut(s) 384, 561
Bpu10I CCTNAGC 6 cut(s) 186, 888, 930, 1230, 2385, 2571
BpuEI CTTGAG 1 cut(s) 1891
BpuMI CCSGG 4 cut(s) 224, 244, 2365, 2551
BsaAI YACGTR 1 cut(s) 1838
BsaBI GATNNNNATC 5 cut(s) 12, 135, 1531, 1612, 2281
BsaI GGTCTC 1 cut(s) 1497
BsaJI CCNNGG 3 cut(s) 243, 643, 906
BsaWI WCCGGW 3 cut(s) 214, 2056, 3047
BsaXI ACNNNNNCTCC 6 cut(s) 357, 387, 1750, 1756, 1780, 1786
Bsc4I CCNNNNNNNGG 7 cut(s) 249, 332, 368, 452, 497, 710, 2496
Bse118I RCCGGY 1 cut(s) 214
Bse1I ACTGG 3 cut(s) 32, 512, 2991
Bse3DI GCAATG 4 cut(s) 882, 1101, 2740, 3135
Bse8I GATNNNNATC 5 cut(s) 12, 135, 1531, 1612, 2281
BseAI TCCGGA 2 cut(s) 2056, 3047
BseBI CCWGG 9 cut(s) 194, 363, 645, 666, 678, 705, 908, 1866, 2185
BseDI CCNNGG 3 cut(s) 243, 643, 906
BseGI GGATG 9 cut(s) 45, 402, 1189, 2065, 2408, 2431, 2617, 2671, 2698
BseJI GATNNNNATC 5 cut(s) 12, 135, 1531, 1612, 2281
BseLI CCNNNNNNNGG 7 cut(s) 249, 332, 368, 452, 497, 710, 2496
BseMI GCAATG 4 cut(s) 882, 1101, 2740, 3135
BseMII CTCAG 7 cut(s) 69, 177, 902, 944, 962, 1244, 2949
BseNI ACTGG 3 cut(s) 32, 512, 2991
BseRI GAGGAG 2 cut(s) 76, 1569
BseSI GKGCMC 1 cut(s) 236
BseYI CCCAGC 3 cut(s) 248, 550, 986
BsgI GTGCAG 3 cut(s) 359, 499, 546
Bsh1236I CGCG 1 cut(s) 257
BshFI GGCC 1 cut(s) 1194
BshNI GGYRCC 3 cut(s) 442, 859, 1082
BshTI ACCGGT 1 cut(s) 214
BsiHKAI GWGCWC 1 cut(s) 236
BsiHKCI CYCGRG 1 cut(s) 1845
BsiSI CCGG 7 cut(s) 215, 224, 243, 2057, 2365, 2550, 3048
BslFI GGGAC 2 cut(s) 433, 2040
BslI CCNNNNNNNGG 7 cut(s) 249, 332, 368, 452, 497, 710, 2496
BsmAI GTCTC 6 cut(s) 732, 1497, 1569, 1665, 2508, 2920
BsmBI CGTCTC 1 cut(s) 2508
BsmFI GGGAC 2 cut(s) 433, 2040
BsmI GAATGC 1 cut(s) 638
BsnI GGCC 1 cut(s) 1194
Bso31I GGTCTC 1 cut(s) 1497
BsoBI CYCGRG 1 cut(s) 1845
Bsp1286I GDGCHC 1 cut(s) 236
Bsp13I TCCGGA 2 cut(s) 2056, 3047
BspANI GGCC 1 cut(s) 1194
BspCNI CTCAG 7 cut(s) 70, 178, 901, 943, 961, 1243, 2950
BspEI TCCGGA 2 cut(s) 2056, 3047
BspFNI CGCG 1 cut(s) 257
BspHI TCATGA 1 cut(s) 2722
BspLI GGNNCC 8 cut(s) 222, 324, 444, 561, 861, 1084, 2382, 2568
BspMAI CTGCAG 2 cut(s) 241, 871
BspMI ACCTGC 1 cut(s) 518
BspPI GGATC 7 cut(s) 169, 260, 388, 1521, 1602, 1608, 2355
BspQI GCTCTTC 1 cut(s) 918
BspT107I GGYRCC 3 cut(s) 442, 859, 1082
BspTI CTTAAG 1 cut(s) 1939
BspTNI GGTCTC 1 cut(s) 1497
BsrBI CCGCTC 2 cut(s) 2121, 2214
BsrDI GCAATG 4 cut(s) 882, 1101, 2740, 3135
BsrFI RCCGGY 1 cut(s) 214
BsrI ACTGG 3 cut(s) 32, 512, 2991
BssAI RCCGGY 1 cut(s) 214
BssECI CCNNGG 3 cut(s) 243, 643, 906
BssSI CACGAG 2 cut(s) 1506, 1791
Bst2BI CACGAG 2 cut(s) 1506, 1791
Bst2UI CCWGG 9 cut(s) 194, 363, 645, 666, 678, 705, 908, 1866, 2185
Bst4CI ACNGT 8 cut(s) 430, 651, 1015, 1048, 1087, 2040, 2547, 3067
Bst6I CTCTTC 8 cut(s) 48, 918, 970, 1278, 1458, 2799, 3074, 3138
BstAFI CTTAAG 1 cut(s) 1939
BstAPI GCANNNNNTGC 7 cut(s) 101, 866, 881, 899, 1160, 1312, 1330
BstBAI YACGTR 1 cut(s) 1838
BstC8I GCNNGC 6 cut(s) 48, 939, 1293, 1326, 1661, 2669
BstF5I GGATG 9 cut(s) 45, 402, 1189, 2065, 2408, 2431, 2617, 2671, 2698
BstFNI CGCG 1 cut(s) 257
BstH2I RGCGCY 1 cut(s) 2644
BstHHI GCGC 3 cut(s) 277, 761, 2643
BstMAI GTCTC 6 cut(s) 732, 1497, 1569, 1665, 2508, 2920
BstNI CCWGG 9 cut(s) 194, 363, 645, 666, 678, 705, 908, 1866, 2185
BstNSI RCATGY 2 cut(s) 273, 610
BstPAI GACNNNNGTC 1 cut(s) 2404
BstSFI CTRYAG 2 cut(s) 237, 867
BstSLI GKGCMC 1 cut(s) 236
BstUI CGCG 1 cut(s) 257
BstV2I GAAGAC 8 cut(s) 1016, 1394, 1881, 1911, 2041, 2272, 2404, 2548
BstX2I RGATCY 4 cut(s) 1526, 1607, 1613, 2887
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 4 cut(s) 1526, 1607, 1613, 2887
BsuRI GGCC 1 cut(s) 1194
BtgZI GCGATG 1 cut(s) 2468
BtrI CACGTC 1 cut(s) 2402
BtsCI GGATG 9 cut(s) 45, 402, 1189, 2065, 2408, 2431, 2617, 2671, 2698
BtsI GCAGTG 2 cut(s) 234, 487
BtsIMutI CAGTG 8 cut(s) 234, 487, 519, 529, 1044, 2013, 2955, 3072
BveI ACCTGC 1 cut(s) 518
Cac8I GCNNGC 6 cut(s) 48, 939, 1293, 1326, 1661, 2669
CaiI CAGNNNCTG 2 cut(s) 626, 2375
CciI TCATGA 1 cut(s) 2722
CfoI GCGC 3 cut(s) 277, 761, 2643
Cfr10I RCCGGY 1 cut(s) 214
Cfr13I GGNCC 5 cut(s) 190, 212, 220, 2181, 2547
CpoI CGGWCCG 1 cut(s) 2547
CseI GACGC 1 cut(s) 1842
CsiI ACCWGGT 1 cut(s) 1864
Csp6I GTAC 5 cut(s) 264, 424, 1098, 2116, 2607
CspAI ACCGGT 1 cut(s) 214
CspCI CAANNNNNGTGG 4 cut(s) 2268, 2303, 2733, 2768
CspI CGGWCCG 1 cut(s) 2547
CviQI GTAC 5 cut(s) 264, 424, 1098, 2116, 2607
DraI TTTAAA 1 cut(s) 1441
Eam1104I CTCTTC 8 cut(s) 48, 918, 970, 1278, 1458, 2799, 3074, 3138
EarI CTCTTC 8 cut(s) 48, 918, 970, 1278, 1458, 2799, 3074, 3138
EciI GGCGGA 2 cut(s) 552, 1573
Eco31I GGTCTC 1 cut(s) 1497
Eco47I GGWCC 5 cut(s) 190, 212, 220, 2181, 2547
Eco88I CYCGRG 1 cut(s) 1845
EcoO109I RGGNCCY 1 cut(s) 190
EcoRI GAATTC 1 cut(s) 1249
EcoRII CCWGG 9 cut(s) 192, 361, 643, 664, 676, 703, 906, 1864, 2183
Esp3I CGTCTC 1 cut(s) 2508
FalI AAGNNNNNCTT 4 cut(s) 1873, 1905, 2288, 2320
FaqI GGGAC 2 cut(s) 433, 2040
FauI CCCGC 3 cut(s) 250, 795, 1698
FauNDI CATATG 1 cut(s) 2862
FbaI TGATCA 1 cut(s) 1726
FblI GTMKAC 2 cut(s) 2012, 2555
FokI GGATG 9 cut(s) 52, 409, 1196, 2072, 2395, 2438, 2624, 2658, 2705
GlaI GCGC 3 cut(s) 276, 760, 2642
GsaI CCCAGC 3 cut(s) 252, 554, 990
GsuI CTGGAG 2 cut(s) 384, 561
HaeII RGCGCY 1 cut(s) 2644
HaeIII GGCC 1 cut(s) 1194
HapII CCGG 7 cut(s) 215, 224, 243, 2057, 2365, 2550, 3048
HgaI GACGC 1 cut(s) 1842
HhaI GCGC 3 cut(s) 277, 761, 2643
Hin6I GCGC 3 cut(s) 275, 759, 2641
HinP1I GCGC 3 cut(s) 275, 759, 2641
HincII GTYRAC 2 cut(s) 589, 3015
HindII GTYRAC 2 cut(s) 589, 3015
HindIII AAGCTT 1 cut(s) 2419
HpaI GTTAAC 2 cut(s) 589, 3015
HpaII CCGG 7 cut(s) 215, 224, 243, 2057, 2365, 2550, 3048
Hpy99I CGWCG 1 cut(s) 1824
HpyCH4III ACNGT 8 cut(s) 430, 651, 1015, 1048, 1087, 2040, 2547, 3067
HpyCH4IV ACGT 5 cut(s) 422, 1742, 1837, 2269, 2401
HpySE526I ACGT 5 cut(s) 422, 1742, 1837, 2269, 2401
HspAI GCGC 3 cut(s) 275, 759, 2641
Kpn2I TCCGGA 2 cut(s) 2056, 3047
Ksp22I TGATCA 1 cut(s) 1726
KspAI GTTAAC 2 cut(s) 589, 3015
LguI GCTCTTC 1 cut(s) 918
LmnI GCTCC 5 cut(s) 63, 565, 713, 2380, 2492
LweI GCATC 9 cut(s) 725, 1275, 1302, 2308, 2491, 2584, 2680, 3010, 3091
MabI ACCWGGT 1 cut(s) 1864
MaeII ACGT 5 cut(s) 422, 1742, 1837, 2269, 2401
MaeIII GTNAC 6 cut(s) 295, 430, 1688, 1743, 1806, 1943
MbiI CCGCTC 2 cut(s) 2121, 2214
MfeI CAATTG 2 cut(s) 894, 1169
MflI RGATCY 4 cut(s) 1526, 1607, 1613, 2887
MhlI GDGCHC 1 cut(s) 236
MlyI GAGTC 6 cut(s) 299, 956, 1103, 2539, 2922, 3038
MmeI TCCRAC 1 cut(s) 1168
MroI TCCGGA 2 cut(s) 2056, 3047
MroXI GAANNNNTTC 2 cut(s) 2269, 2853
MseI TTAA 8 cut(s) 27, 345, 588, 1440, 1940, 2159, 2921, 3014
MslI CAYNNNNRTG 4 cut(s) 830, 1941, 2727, 3065
MspA1I CMGCKG 5 cut(s) 92, 872, 1057, 1241, 2801
MspCI CTTAAG 1 cut(s) 1939
MspI CCGG 7 cut(s) 215, 224, 243, 2057, 2365, 2550, 3048
MunI CAATTG 2 cut(s) 894, 1169
Mva1269I GAATGC 1 cut(s) 638
MvaI CCWGG 9 cut(s) 194, 363, 645, 666, 678, 705, 908, 1866, 2185
MvnI CGCG 1 cut(s) 257
NciI CCSGG 4 cut(s) 224, 244, 2365, 2551
NdeI CATATG 1 cut(s) 2862
NlaIV GGNNCC 8 cut(s) 222, 324, 444, 561, 861, 1084, 2382, 2568
NmuCI GTSAC 5 cut(s) 295, 1688, 1743, 1806, 1943
NspI RCATGY 2 cut(s) 273, 610
OliI CACNNNNGTG 1 cut(s) 1941
PaeR7I CTCGAG 1 cut(s) 1845
PagI TCATGA 1 cut(s) 2722
PciSI GCTCTTC 1 cut(s) 918
PcsI WCGNNNNNNNCGW 1 cut(s) 1843
PctI GAATGC 1 cut(s) 638
PdmI GAANNNNTTC 2 cut(s) 2269, 2853
PfeI GAWTC 9 cut(s) 136, 173, 661, 1709, 1799, 2654, 2762, 2825, 2962
PflMI CCANNNNNTGG 2 cut(s) 332, 710
PinAI ACCGGT 1 cut(s) 214
PleI GAGTC 6 cut(s) 299, 956, 1103, 2538, 2921, 3038
PpsI GAGTC 6 cut(s) 299, 956, 1103, 2538, 2921, 3038
Ppu21I YACGTR 1 cut(s) 1838
PpuMI RGGWCCY 1 cut(s) 190
PshAI GACNNNNGTC 1 cut(s) 2404
Psp5II RGGWCCY 1 cut(s) 190
Psp6I CCWGG 9 cut(s) 192, 361, 643, 664, 676, 703, 906, 1864, 2183
PspFI CCCAGC 3 cut(s) 248, 550, 986
PspGI CCWGG 9 cut(s) 192, 361, 643, 664, 676, 703, 906, 1864, 2183
PspN4I GGNNCC 8 cut(s) 222, 324, 444, 561, 861, 1084, 2382, 2568
PspPI GGNCC 5 cut(s) 190, 212, 220, 2181, 2547
PspPPI RGGWCCY 1 cut(s) 190
PspXI VCTCGAGB 1 cut(s) 1845
PstI CTGCAG 2 cut(s) 241, 871
PstNI CAGNNNCTG 2 cut(s) 626, 2375
PsuI RGATCY 4 cut(s) 1526, 1607, 1613, 2887
PvuII CAGCTG 3 cut(s) 872, 1057, 1241
RsaI GTAC 5 cut(s) 265, 425, 1099, 2117, 2608
RsaNI GTAC 5 cut(s) 264, 424, 1098, 2116, 2607
RseI CAYNNNNRTG 4 cut(s) 830, 1941, 2727, 3065
Rsr2I CGGWCCG 1 cut(s) 2547
RsrII CGGWCCG 1 cut(s) 2547
SapI GCTCTTC 1 cut(s) 918
SaqAI TTAA 8 cut(s) 27, 345, 588, 1440, 1940, 2159, 2921, 3014
Sau96I GGNCC 5 cut(s) 190, 212, 220, 2181, 2547
SchI GAGTC 6 cut(s) 299, 956, 1103, 2539, 2922, 3038
SduI GDGCHC 1 cut(s) 236
SexAI ACCWGGT 1 cut(s) 1864
SfaNI GCATC 9 cut(s) 725, 1275, 1302, 2308, 2491, 2584, 2680, 3010, 3091
SfcI CTRYAG 2 cut(s) 237, 867
Sfr274I CTCGAG 1 cut(s) 1845
SinI GGWCC 5 cut(s) 190, 212, 220, 2181, 2547
SlaI CTCGAG 1 cut(s) 1845
SmiMI CAYNNNNRTG 4 cut(s) 830, 1941, 2727, 3065
SmlI CTYRAG 3 cut(s) 1845, 1906, 1939
SmoI CTYRAG 3 cut(s) 1845, 1906, 1939
TaaI ACNGT 8 cut(s) 430, 651, 1015, 1048, 1087, 2040, 2547, 3067
TaiI ACGT 5 cut(s) 425, 1745, 1840, 2272, 2404
TaqI TCGA 4 cut(s) 10, 139, 1819, 1846
TauI GCSGC 2 cut(s) 89, 95
TfiI GAWTC 9 cut(s) 136, 173, 661, 1709, 1799, 2654, 2762, 2825, 2962
Tru1I TTAA 8 cut(s) 27, 345, 588, 1440, 1940, 2159, 2921, 3014
Tru9I TTAA 8 cut(s) 27, 345, 588, 1440, 1940, 2159, 2921, 3014
TscAI CASTG 8 cut(s) 241, 487, 519, 529, 1051, 2013, 2962, 3072
TseFI GTSAC 5 cut(s) 295, 1688, 1743, 1806, 1943
Tsp45I GTSAC 5 cut(s) 295, 1688, 1743, 1806, 1943
TspGWI ACGGA 2 cut(s) 1762, 2624
TspRI CASTG 8 cut(s) 241, 487, 519, 529, 1051, 2013, 2962, 3072
Van91I CCANNNNNTGG 2 cut(s) 332, 710
Vha464I CTTAAG 1 cut(s) 1939
VneI GTGCAC 1 cut(s) 232
VpaK11BI GGWCC 5 cut(s) 190, 212, 220, 2181, 2547
XapI RAATTY 2 cut(s) 1249, 1436
XbaI TCTAGA 3 cut(s) 1856, 2273, 2909
XceI RCATGY 2 cut(s) 273, 610
XcmI CCANNNNNNNNNTGG 1 cut(s) 214
XhoI CTCGAG 1 cut(s) 1845
XmiI GTMKAC 2 cut(s) 2012, 2555
XmnI GAANNNNTTC 2 cut(s) 2269, 2853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.