AT3G24000

DYW family of nucleic acid deaminases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0017537
Physical Location & Seq
Forward (+)
8672718 .. 8674881
2164 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G24000.1

Sequence Viewer

Length: 1902 bp
ATGGCATTGCGTTTCCCGCCTCGTCTCCTCTCTCAGCTGAAGCTATCTCGGCGTCTGAATTCTCTCCCGGCACCGGTATCTGAAGATTCCGAAGACGAATCTTTAAAATTCCCATCCAATGATCTTCTTCTCCGAACGAGTAGCAATGATCTCGAGGGCAGTTATATTCCCGCCGATAGACGTTTCTACAACACGCTGCTGAAGAAATGTACAGTCTTTAAGTTGCTCATTCAGGGAAGGATCGTTCATGCTCATATCCTTCAATCTATCTTTCGTCATGACATTGTTATGGGCAACACTCTTCTCAATATGTATGCTAAATGCGGAAGTTTGGAGGAAGCTCGTAAAGTGTTCGAAAAAATGCCTCAGAGAGATTTTGTTACTTGGACTACTTTGATTTCTGGTTACTCGCAGCATGATCGACCTTGTGATGCGTTACTTTTTTTTAATCAGATGTTGAGATTTGGATATAGTCCCAATGAGTTCACTTTGTCTAGTGTGATCAAAGCTGCTGCAGCTGAGAGAAGGGGATGTTGTGGTCATCAACTTCATGGGTTCTGTGTAAAATGTGGTTTTGATTCGAATGTTCATGTTGGTAGTGCTCTTCTTGATTTGTATACTCGCTATGGTCTTATGGATGATGCACAATTAGTCTTTGATGCGCTTGAGAGCAGGAATGATGTTTCTTGGAATGCTCTGATTGCTGGTCATGCTAGGAGAAGTGGTACAGAGAAAGCTCTGGAGCTTTTTCAAGGGATGCTTAGAGATGGTTTTAGACCTTCCCATTTCTCATACGCTAGCCTCTTTGGTGCTTGTTCCAGTACAGGGTTCTTGGAGCAAGGGAAATGGGTTCACGCTTATATGATTAAATCCGGTGAAAAGCTTGTGGCCTTCGCGGGAAACACTCTTCTTGACATGTATGCAAAATCAGGAAGCATCCATGACGCGAGGAAAATATTCGATAGATTGGCTAAAAGGGATGTGGTGTCTTGGAACTCGCTGCTGACTGCTTATGCCCAACATGGATTTGGAAAGGAAGCAGTGTGGTGGTTCGAGGAAATGAGGAGGGTTGGGATTCGCCCCAATGAAATCTCGTTTCTCTCTGTGCTTACAGCTTGCAGCCATTCTGGTCTTCTAGATGAAGGATGGCATTACTATGAATTGATGAAGAAAGATGGGATAGTTCCCGAGGCTTGGCACTACGTCACAGTCGTAGACCTTCTTGGGCGAGCCGGTGATCTTAATAGGGCACTGAGATTCATTGAAGAAATGCCAATAGAACCCACTGCAGCCATCTGGAAAGCCCTGCTTAATGCTTGTAGAATGCATAAGAATACGGAATTGGGAGCTTATGCGGCTGAGCATGTATTTGAACTTGACCCTGACGACCCTGGTCCCCATGTAATACTATATAACATCTATGCATCTGGTGGCAGATGGAACGATGCTGCGAGAGTGAGAAAGAAGATGAAGGAAAGTGGAGTGAAGAAGGAACCTGCTTGCAGTTGGGTAGAGATTGAGAATGCAATCCACATGTTTGTGGCAAATGATGAACGTCATCCACAGAGGGAGGAGATTGCTCGGAAGTGGGAAGAGGTTTTAGCAAAGATCAAGGAGTTGGGATATGTGCCAGACACTAGCCATGTAATAGTCCATGTGGATCAACAGGAGAGGGAAGTGAATTTACAATATCATAGTGAGAAAATTGCGTTGGCGTTTGCGCTTCTCAACACTCCTCCTGGATCAACTATACACATCAAGAAGAACATCCGTGTTTGTGGGGATTGCCATACAGCAATAAAGTTGGCGTCAAAGGTGGTTGGGAGAGAAATCATTGTGAGAGATACTAATCGGTTCCACCATTTTAAGGATGGTAATTGTTCTTGCAAGGATTATTGGTAG

Protein Analysis

633

Amino Acids

71.93

Weight (kDa)

8.08

Isoelectric Point (pI)

49.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 125 - 171 2.1e-10 PPR repeat family
PPR_2 PF13041 226 - 273 2.5e-09 PPR repeat family
PPR_2 PF13041 326 - 374 2.1e-10 PPR repeat family
PPR_3 PF13812 326 - 373 1.3e-06 Pentatricopeptide repeat domain
PPR PF01535 329 - 359 2.6e-08 PPR repeat
E_motif PF20431 443 - 505 8.6e-22 E motif
DYW_deaminase PF14432 541 - 633 5.3e-41 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017537)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G24000
fragaria_vesca FvH4_3g00130
malus_domestica MD05G1044700.v1.1
prunus_persica Prupe.4G001500_v2.0.a1
pyrus_communis pycom05g03730
rosa_chinensis RchiOBHm_Chr5g0000171
rosa_laevigata RLG00000030847
rosa_multiflora Rmu_ssc0000243.1_g000013
rosa_roxburghii Rroxscaffold_1G00075920
rosa_rugosa Rorug04G0382100
rosa_samantha Rh5CG001500
rosa_wichuraiana Rw5G000160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1504
AccB1I GGYRCC 1 cut(s) 70
AccI GTMKAC 2 cut(s) 617, 1215
AccII CGCG 2 cut(s) 896, 947
AciI CCGC 5 cut(s) 17, 171, 324, 896, 1355
AclWI GGATC 3 cut(s) 248, 1668, 1750
AcsI RAATTY 3 cut(s) 58, 107, 1681
AcuI CTGAAG 3 cut(s) 59, 102, 221
AcyI GRCGYC 2 cut(s) 52, 1808
AfaI GTAC 3 cut(s) 211, 727, 823
AfiI CCNNNNNNNGG 4 cut(s) 73, 825, 1194, 1867
AflIII ACRYGT 2 cut(s) 915, 1533
AgeI ACCGGT 1 cut(s) 73
AgsI TTSAA 4 cut(s) 263, 752, 1265, 1373
AjnI CCWGG 2 cut(s) 1390, 1738
AjuI GAANNNNNNNTTGG 4 cut(s) 1325, 1357, 1694, 1726
AloI GAACNNNNNNTCC 2 cut(s) 228, 260
Alw21I GWGCWC 1 cut(s) 604
Alw26I GTCTC 1 cut(s) 29
AlwI GGATC 3 cut(s) 248, 1668, 1750
Ama87I CYCGRG 2 cut(s) 152, 1187
AoxI GGCC 1 cut(s) 888
ApeKI GCWGC 9 cut(s) 196, 412, 509, 512, 515, 1000, 1119, 1289, 1448
ApoI RAATTY 3 cut(s) 58, 107, 1681
AsiGI ACCGGT 1 cut(s) 73
Asp700I GAANNNNTTC 1 cut(s) 956
AspLEI GCGC 2 cut(s) 664, 1723
AspS9I GGNCC 1 cut(s) 1394
AsuC2I CCSGG 1 cut(s) 68
AsuHPI GGTGA 2 cut(s) 887, 1247
AsuII TTCGAA 2 cut(s) 354, 581
AsuNHI GCTAGC 1 cut(s) 797
AvaI CYCGRG 2 cut(s) 152, 1187
AvaII GGWCC 1 cut(s) 1394
BaeGI GKGCMC 1 cut(s) 1252
BanI GGYRCC 1 cut(s) 70
BarI GAAGNNNNNNTAC 2 cut(s) 1668, 1700
BbsI GAAGAC 2 cut(s) 99, 1124
Bbv12I GWGCWC 1 cut(s) 604
BbvI GCAGC 9 cut(s) 183, 424, 496, 499, 527, 987, 1131, 1301, 1435
BccI CCATC 7 cut(s) 121, 761, 1140, 1169, 1301, 1431, 1865
BcgI CGANNNNNNTGC 4 cut(s) 133, 167, 401, 435
BciT130I CCWGG 2 cut(s) 1392, 1740
BclI TGATCA 1 cut(s) 501
BcnI CCSGG 1 cut(s) 68
BcoDI GTCTC 1 cut(s) 29
BfaI CTAG 5 cut(s) 495, 714, 798, 1136, 1638
BfmI CTRYAG 2 cut(s) 513, 1287
BfuAI ACCTGC 1 cut(s) 1504
BlpI GCTNAGC 1 cut(s) 1359
Bme1390I CCNGG 3 cut(s) 68, 1392, 1740
Bme18I GGWCC 1 cut(s) 1394
BmeT110I CYCGRG 2 cut(s) 152, 1187
BmgT120I GGNCC 1 cut(s) 1394
BmiI GGNNCC 4 cut(s) 72, 1396, 1494, 1856
BmrFI CCNGG 3 cut(s) 68, 1392, 1740
BmsI GCATC 7 cut(s) 421, 631, 649, 747, 945, 1433, 1435
BmtI GCTAGC 1 cut(s) 801
BoxI GACNNNNGTC 1 cut(s) 1392
BpiI GAAGAC 2 cut(s) 99, 1124
BpmI CTGGAG 1 cut(s) 761
Bpu1102I GCTNAGC 1 cut(s) 1359
Bpu14I TTCGAA 2 cut(s) 354, 581
BpuEI CTTGAG 1 cut(s) 686
BpuMI CCSGG 1 cut(s) 68
BsaBI GATNNNNATC 1 cut(s) 1848
BsaHI GRCGYC 2 cut(s) 52, 1808
BsaJI CCNNGG 2 cut(s) 1188, 1390
BsaWI WCCGGW 2 cut(s) 73, 872
BsaXI ACNNNNNCTCC 2 cut(s) 709, 739
Bsc4I CCNNNNNNNGG 4 cut(s) 73, 825, 1194, 1867
Bse118I RCCGGY 2 cut(s) 73, 1232
Bse1I ACTGG 1 cut(s) 819
Bse3DI GCAATG 2 cut(s) 5, 151
Bse8I GATNNNNATC 1 cut(s) 1848
BseBI CCWGG 2 cut(s) 1392, 1740
BseDI CCNNGG 2 cut(s) 1188, 1390
BseJI GATNNNNATC 1 cut(s) 1848
BseLI CCNNNNNNNGG 4 cut(s) 73, 825, 1194, 1867
BseMI GCAATG 2 cut(s) 5, 151
BseMII CTCAG 5 cut(s) 47, 380, 510, 1244, 1350
BseNI ACTGG 1 cut(s) 819
BseRI GAGGAG 4 cut(s) 17, 1078, 1586, 1725
BseSI GKGCMC 1 cut(s) 1252
BseXI GCAGC 9 cut(s) 183, 424, 496, 499, 527, 987, 1131, 1301, 1435
Bsh1236I CGCG 2 cut(s) 896, 947
BshFI GGCC 1 cut(s) 890
BshNI GGYRCC 1 cut(s) 70
BshTI ACCGGT 1 cut(s) 73
BsiHKAI GWGCWC 1 cut(s) 604
BsiHKCI CYCGRG 2 cut(s) 152, 1187
BsiSI CCGG 4 cut(s) 68, 74, 873, 1233
BslFI GGGAC 2 cut(s) 459, 1380
BslI CCNNNNNNNGG 4 cut(s) 73, 825, 1194, 1867
BsmAI GTCTC 1 cut(s) 29
BsmBI CGTCTC 1 cut(s) 29
BsmFI GGGAC 2 cut(s) 459, 1380
BsmI GAATGC 3 cut(s) 697, 1329, 1528
BsnI GGCC 1 cut(s) 890
BsoBI CYCGRG 2 cut(s) 152, 1187
Bsp119I TTCGAA 2 cut(s) 354, 581
Bsp1286I GDGCHC 2 cut(s) 604, 1252
Bsp1407I TGTACA 1 cut(s) 209
Bsp143I GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
Bsp1720I GCTNAGC 1 cut(s) 1359
BspACI CCGC 5 cut(s) 17, 171, 324, 896, 1355
BspANI GGCC 1 cut(s) 890
BspCNI CTCAG 5 cut(s) 46, 379, 511, 1245, 1351
BspFNI CGCG 2 cut(s) 896, 947
BspHI TCATGA 1 cut(s) 277
BspLI GGNNCC 4 cut(s) 72, 1396, 1494, 1856
BspMAI CTGCAG 2 cut(s) 517, 1291
BspMI ACCTGC 1 cut(s) 1504
BspOI GCTAGC 1 cut(s) 801
BspPI GGATC 3 cut(s) 248, 1668, 1750
BspQI GCTCTTC 1 cut(s) 609
BspT104I TTCGAA 2 cut(s) 354, 581
BspT107I GGYRCC 1 cut(s) 70
BsrDI GCAATG 2 cut(s) 5, 151
BsrFI RCCGGY 2 cut(s) 73, 1232
BsrGI TGTACA 1 cut(s) 209
BsrI ACTGG 1 cut(s) 819
BssAI RCCGGY 2 cut(s) 73, 1232
BssECI CCNNGG 2 cut(s) 1188, 1390
BssMI GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
BssNAI GTATAC 1 cut(s) 618
BssNI GRCGYC 2 cut(s) 52, 1808
Bst1107I GTATAC 1 cut(s) 618
Bst2UI CCWGG 2 cut(s) 1392, 1740
Bst4CI ACNGT 2 cut(s) 214, 1210
Bst6I CTCTTC 4 cut(s) 306, 609, 912, 1587
BstACI GRCGYC 2 cut(s) 52, 1808
BstAUI TGTACA 1 cut(s) 209
BstBI TTCGAA 2 cut(s) 354, 581
BstC8I GCNNGC 4 cut(s) 799, 1117, 1230, 1501
BstDEI CTNAG 6 cut(s) 33, 366, 519, 761, 1253, 1359
BstFNI CGCG 2 cut(s) 896, 947
BstHHI GCGC 2 cut(s) 664, 1723
BstKTI GATC 9 cut(s) 124, 151, 243, 421, 504, 1240, 1611, 1663, 1745
BstMAI GTCTC 1 cut(s) 29
BstMBI GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
BstMWI GCNNNNNNNGC 6 cut(s) 16, 49, 515, 701, 710, 1355
BstNI CCWGG 2 cut(s) 1392, 1740
BstNSI RCATGY 3 cut(s) 919, 1367, 1537
BstPAI GACNNNNGTC 1 cut(s) 1392
BstSCI CCNGG 3 cut(s) 66, 1390, 1738
BstSFI CTRYAG 2 cut(s) 513, 1287
BstSLI GKGCMC 1 cut(s) 1252
BstUI CGCG 2 cut(s) 896, 947
BstV1I GCAGC 9 cut(s) 183, 424, 496, 499, 527, 987, 1131, 1301, 1435
BstV2I GAAGAC 2 cut(s) 99, 1124
BstZ17I GTATAC 1 cut(s) 618
BsuRI GGCC 1 cut(s) 890
BtsI GCAGTG 2 cut(s) 1047, 1284
BtsIMutI CAGTG 3 cut(s) 1047, 1250, 1284
BveI ACCTGC 1 cut(s) 1504
Cac8I GCNNGC 4 cut(s) 799, 1117, 1230, 1501
CciI TCATGA 1 cut(s) 277
CfoI GCGC 2 cut(s) 664, 1723
Cfr10I RCCGGY 2 cut(s) 73, 1232
Cfr13I GGNCC 1 cut(s) 1394
CseI GACGC 3 cut(s) 41, 953, 1797
Csp6I GTAC 3 cut(s) 210, 726, 822
CspAI ACCGGT 1 cut(s) 73
CviQI GTAC 3 cut(s) 210, 726, 822
DdeI CTNAG 6 cut(s) 33, 366, 519, 761, 1253, 1359
DpnI GATC 9 cut(s) 123, 150, 242, 420, 503, 1239, 1610, 1662, 1744
DpnII GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
DraI TTTAAA 1 cut(s) 105
Eam1104I CTCTTC 4 cut(s) 306, 609, 912, 1587
EarI CTCTTC 4 cut(s) 306, 609, 912, 1587
Eco47I GGWCC 1 cut(s) 1394
Eco57I CTGAAG 3 cut(s) 59, 102, 221
Eco88I CYCGRG 2 cut(s) 152, 1187
EcoRI GAATTC 1 cut(s) 58
EcoRII CCWGG 2 cut(s) 1390, 1738
EcoT22I ATGCAT 2 cut(s) 1329, 1426
Esp3I CGTCTC 1 cut(s) 29
FalI AAGNNNNNCTT 4 cut(s) 744, 776, 1293, 1325
FaqI GGGAC 2 cut(s) 459, 1380
FauI CCCGC 3 cut(s) 24, 178, 889
FbaI TGATCA 1 cut(s) 501
FblI GTMKAC 2 cut(s) 617, 1215
FspBI CTAG 5 cut(s) 495, 714, 798, 1136, 1638
GlaI GCGC 2 cut(s) 663, 1722
GsuI CTGGAG 1 cut(s) 761
HaeIII GGCC 1 cut(s) 890
HapII CCGG 4 cut(s) 68, 74, 873, 1233
HgaI GACGC 3 cut(s) 41, 953, 1797
HhaI GCGC 2 cut(s) 664, 1723
Hin1I GRCGYC 2 cut(s) 52, 1808
Hin6I GCGC 2 cut(s) 662, 1721
HinP1I GCGC 2 cut(s) 662, 1721
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 5 cut(s) 86, 98, 578, 1075, 1257
HpaII CCGG 4 cut(s) 68, 74, 873, 1233
HphI GGTGA 2 cut(s) 887, 1247
Hpy166II GTNNAC 4 cut(s) 486, 618, 853, 1216
Hpy188I TCNGA 8 cut(s) 57, 82, 91, 134, 369, 453, 699, 1584
Hpy8I GTNNAC 4 cut(s) 486, 618, 853, 1216
HpyAV CCTTC 9 cut(s) 231, 269, 519, 789, 901, 1136, 1229, 1465, 1483
HpyCH4III ACNGT 2 cut(s) 214, 1210
HpyCH4IV ACGT 3 cut(s) 181, 1203, 1555
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 49, 515, 701, 710, 1355
HpyF3I CTNAG 6 cut(s) 33, 366, 519, 761, 1253, 1359
HpySE526I ACGT 3 cut(s) 181, 1203, 1555
Hsp92I GRCGYC 2 cut(s) 52, 1808
HspAI GCGC 2 cut(s) 662, 1721
Ksp22I TGATCA 1 cut(s) 501
Kzo9I GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
LguI GCTCTTC 1 cut(s) 609
LmnI GCTCC 3 cut(s) 742, 835, 1346
Lsp1109I GCAGC 9 cut(s) 183, 424, 496, 499, 527, 987, 1131, 1301, 1435
LweI GCATC 7 cut(s) 421, 631, 649, 747, 945, 1433, 1435
MaeI CTAG 5 cut(s) 495, 714, 798, 1136, 1638
MaeII ACGT 3 cut(s) 181, 1203, 1555
MaeIII GTNAC 4 cut(s) 379, 404, 435, 1204
MalI GATC 9 cut(s) 123, 150, 242, 420, 503, 1239, 1610, 1662, 1744
MboI GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
MhlI GDGCHC 2 cut(s) 604, 1252
MluCI AATT 8 cut(s) 58, 107, 647, 1160, 1340, 1681, 1704, 1876
Mph1103I ATGCAT 2 cut(s) 1329, 1426
MroXI GAANNNNTTC 1 cut(s) 956
MseI TTAA 7 cut(s) 104, 219, 447, 867, 1242, 1311, 1866
MslI CAYNNNNRTG 3 cut(s) 287, 1155, 1538
MspA1I CMGCKG 2 cut(s) 37, 518
MspI CCGG 4 cut(s) 68, 74, 873, 1233
MspR9I CCNGG 3 cut(s) 68, 1392, 1740
Mva1269I GAATGC 3 cut(s) 697, 1329, 1528
MvaI CCWGG 2 cut(s) 1392, 1740
MvnI CGCG 2 cut(s) 896, 947
MwoI GCNNNNNNNGC 6 cut(s) 16, 49, 515, 701, 710, 1355
NciI CCSGG 1 cut(s) 68
NdeII GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
NheI GCTAGC 1 cut(s) 797
NlaIV GGNNCC 4 cut(s) 72, 1396, 1494, 1856
NmeAIII GCCGAG 1 cut(s) 28
NmuCI GTSAC 1 cut(s) 1204
NsiI ATGCAT 2 cut(s) 1329, 1426
NspI RCATGY 3 cut(s) 919, 1367, 1537
NspV TTCGAA 2 cut(s) 354, 581
PaeR7I CTCGAG 1 cut(s) 152
PagI TCATGA 1 cut(s) 277
PciI ACATGT 2 cut(s) 915, 1533
PciSI GCTCTTC 1 cut(s) 609
PcsI WCGNNNNNNNCGW 1 cut(s) 1209
PctI GAATGC 3 cut(s) 697, 1329, 1528
PdmI GAANNNNTTC 1 cut(s) 956
PfeI GAWTC 5 cut(s) 86, 98, 578, 1075, 1257
PfoI TCCNGGA 1 cut(s) 1738
PinAI ACCGGT 1 cut(s) 73
PscI ACATGT 2 cut(s) 915, 1533
PshAI GACNNNNGTC 1 cut(s) 1392
Psp6I CCWGG 2 cut(s) 1390, 1738
PspGI CCWGG 2 cut(s) 1390, 1738
PspN4I GGNNCC 4 cut(s) 72, 1396, 1494, 1856
PspPI GGNCC 1 cut(s) 1394
PstI CTGCAG 2 cut(s) 517, 1291
PvuII CAGCTG 2 cut(s) 37, 518
RsaI GTAC 3 cut(s) 211, 727, 823
RsaNI GTAC 3 cut(s) 210, 726, 822
RseI CAYNNNNRTG 3 cut(s) 287, 1155, 1538
SapI GCTCTTC 1 cut(s) 609
SaqAI TTAA 7 cut(s) 104, 219, 447, 867, 1242, 1311, 1866
Sau3AI GATC 9 cut(s) 121, 148, 240, 418, 501, 1237, 1608, 1660, 1742
Sau96I GGNCC 1 cut(s) 1394
ScrFI CCNGG 3 cut(s) 68, 1392, 1740
SduI GDGCHC 2 cut(s) 604, 1252
SfaNI GCATC 7 cut(s) 421, 631, 649, 747, 945, 1433, 1435
SfcI CTRYAG 2 cut(s) 513, 1287
Sfr274I CTCGAG 1 cut(s) 152
SfuI TTCGAA 2 cut(s) 354, 581
SinI GGWCC 1 cut(s) 1394
SlaI CTCGAG 1 cut(s) 152
SmiMI CAYNNNNRTG 3 cut(s) 287, 1155, 1538
SmlI CTYRAG 2 cut(s) 152, 665
SmoI CTYRAG 2 cut(s) 152, 665
Sse9I AATT 8 cut(s) 58, 107, 647, 1160, 1340, 1681, 1704, 1876
SsiI CCGC 5 cut(s) 17, 171, 324, 896, 1355
SspI AATATT 1 cut(s) 957
SspMI CTAG 5 cut(s) 495, 714, 798, 1136, 1638
StyD4I CCNGG 3 cut(s) 66, 1390, 1738
TaaI ACNGT 2 cut(s) 214, 1210
TaiI ACGT 3 cut(s) 184, 1206, 1558
TaqI TCGA 6 cut(s) 153, 354, 421, 581, 960, 1053
TasI AATT 8 cut(s) 58, 107, 647, 1160, 1340, 1681, 1704, 1876
TatI WGTACW 2 cut(s) 209, 821
TauI GCSGC 1 cut(s) 1358
TfiI GAWTC 5 cut(s) 86, 98, 578, 1075, 1257
Tru1I TTAA 7 cut(s) 104, 219, 447, 867, 1242, 1311, 1866
Tru9I TTAA 7 cut(s) 104, 219, 447, 867, 1242, 1311, 1866
TscAI CASTG 3 cut(s) 1047, 1257, 1291
TseFI GTSAC 1 cut(s) 1204
TseI GCWGC 9 cut(s) 196, 412, 509, 512, 515, 1000, 1119, 1289, 1448
Tsp45I GTSAC 1 cut(s) 1204
TspGWI ACGGA 2 cut(s) 1352, 1760
TspRI CASTG 3 cut(s) 1047, 1257, 1291
VpaK11BI GGWCC 1 cut(s) 1394
XapI RAATTY 3 cut(s) 58, 107, 1681
XbaI TCTAGA 1 cut(s) 1135
XceI RCATGY 3 cut(s) 919, 1367, 1537
XcmI CCANNNNNNNNNTGG 2 cut(s) 1025, 1868
XhoI CTCGAG 1 cut(s) 152
XmiI GTMKAC 2 cut(s) 617, 1215
XmnI GAANNNNTTC 1 cut(s) 956
XspI CTAG 5 cut(s) 495, 714, 798, 1136, 1638
Zsp2I ATGCAT 2 cut(s) 1329, 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.