Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0017537

Physical Location & Seq

Genomic Coordinates Reverse (-)

141969 .. 145142

Gene Structure 3174 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G001500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGTCAAGACATATATCTAAATCCAAATCCAAGGCCTTGTACTTGTACAAGAAGGCTGCTGCTGTTGGCATTCAGAAACTTTCATTATCGGCGGCACAGTTGAGGACGTCTGCAACTCGGGCTTCCTGCACGGACTCGGAAGAAATTTCAGAAGGCGAAGACTGGTACGCTTCCCATATCATCCAAGATAAGGACCTTCTTCGCAAGAGCCTCCACAATTCGGGAACAGGGCTTCATGTTCTGGACTTGGTTAATCGCGGTTCCTTGGAAGCGGACCGGACTCTGTACAATAAGTTACTAAACAGATGTACCCAGATGGGCAGACTTCAACAAGCAAGAATTGTGCACGCTCACATCCTTACTTCCCACTTTAAAGATGACCTTCCCATCCACAATACCATCCTTAACATGTATGTCAAATGCGGTAGTTTGGAAGACGCTCGTAACTTGTTTGATCAAATGCCTAGCAAGGACTTGGTCACTTGGACTGCCTTGATTTCTGGCTATTCTCAATATGATCGACCTCAGGATGCACTTGTTTTGTTTCCTCAAATGCTCCTCCGTGGCCTGGAACCCAATCAGTTCACCTTGTCTAGCTTGTTCAAGGCTGCTGGTGCTGTGTCTGATGATAACAACAAGCACGGCAGGCAGCTTCACGCTTATTGCCTTAAGTACGGTTTTGATACCAATGTTTATGTGGGCACTTCTCTTGTGGACATGTATGCTAGGTGGGGCCATATGGATGAATCCCAGTTGATCTTTGACTCCCTGGAGACCAAGAATGAGGTGTCTTGGAATGCTTTGATTGCTGGGCATGCTAGGAAGGCTCAAGGAGAGCATGCTCTCAGGTTGTTCTGGAAGATGCTCAGGGAAGGATTTAAACCCACACATTTCACTTATTCTAGCGTCTTTACTGCCTGTGCCAGTGCAGGGTCTATGGAGCAAGGCAAGTGGGTTCACGCCCACATGATAAAATCGGGTGCTAAGCTTGTTGCTTTTGTCGGGAATACTCTTCTTGACATGTATGCCAAATCAGGCAGCATTGAGGATGCAAGAAAGGTTTTTGACAGGTTGGTTAGACAAGACATTGTTTCTTGGAATTCTATGCTTACTGGATACGCCCAGCATGGGCTTGGACAGGAAACTGTACAGCGGTTTGAAGAAATGCTGAGAATTGGAATCCAACCTAATGATATAACCTTTCTTTGTGTTCTTACTGCCTGCAGCCATGCTGGTCTCTTGGATGAGGGACAATATTATTTTGACTTGATGAAAAGTTACAACATAGAACTGCAGATTTCACACTACGTGACAATTGTTGATCTTCTTGGCCGTGCAGGTCTTCTTGATCGAGCTGCGAAGTTCATAAGAGAAATGCCGATTGAACCCACTGCAGCTGTTTGGGGAGCCCTGTTAGGTGCCTGTAGGATGCACAAGAATATAGACTTGGGCGCTTATGCTGCTGAACGTGTTTTTGAGCTTGATCCCCATGATTCAGGCCCCCATGTCTTACTTTCTAATATCTATGCCTCTGCTGGCAGATTAAGTGACGCTGCAAGAGTGAGAAAGTTGATGAAAGATTGTGGGGTGAAAAAAGAACCTGCTTGTAGTTGGGTGGAGATTGAGAATGCAGTCCACATGTTTGTGGCAAATGATGATGCTCACCCGCAAAGAGTAGAGATCCTTCAGATGTGGGAGACGATTAGTGGGAAGATTAAGGACATTGGATACGTCCCAGACACTAGCCATGTTCTTTTCTTTGTGGACCAGCAGGAGAGGGAAGTCAAGTTGCAGTACCATAGTGAGAAGCTTGCTCTAGCATTTGCGCTTCTTAACACTACTCCAGGATCCACCATTCGGATCAAGAAGAACATCAGGGTTTGTGGTGATTGTCATTCGGCAATCAAGTACGTCTCAAAGGTGGAAGGGAGAGAAATCATTGTGAGAGATACAAACCGGTTCCATCATTTCCGCAATGGCTCTTGTTCTTGTAGGGACTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

669

Amino Acids

75.33

Weight (kDa)

8.25

Isoelectric Point (pI)

40.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017537)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24000
fragaria_vesca	FvH4_3g00130
malus_domestica	MD05G1044700.v1.1
prunus_persica	Prupe.4G001500_v2.0.a1
pyrus_communis	pycom05g03730
rosa_chinensis	RchiOBHm_Chr5g0000171
rosa_laevigata	RLG00000030847
rosa_multiflora	Rmu_ssc0000243.1_g000013
rosa_roxburghii	Rroxscaffold_1G00075920
rosa_rugosa	Rorug04G0382100
rosa_samantha	Rh5CG001500
rosa_wichuraiana	Rw5G000160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	110
Acc36I	ACCTGC	2 cut(s)	1328, 1609
AccB1I	GGYRCC	1 cut(s)	1418
AccII	CGCG	1 cut(s)	258
AciI	CCGC	7 cut(s)	92, 258, 272, 423, 1153, 1667, 1972
AclWI	GGATC	5 cut(s)	1478, 1675, 1842, 1855, 1868
AcoI	YGGCCR	1 cut(s)	1330
AcsI	RAATTY	2 cut(s)	144, 1099
AcuI	CTGAAG	1 cut(s)	1670
AcyI	GRCGYC	1 cut(s)	107
AdeI	CACNNNGTG	1 cut(s)	1309
AfaI	GTAC	9 cut(s)	41, 47, 167, 287, 310, 674, 1149, 1796, 1910
AfiI	CCNNNNNNNGG	6 cut(s)	190, 220, 568, 930, 1128, 1857
AflII	CTTAAG	1 cut(s)	668
AflIII	ACRYGT	5 cut(s)	408, 717, 1020, 1468, 1638
AgeI	ACCGGT	1 cut(s)	1956
AgsI	TTSAA	4 cut(s)	329, 604, 1160, 1385
AjnI	CCWGG	3 cut(s)	567, 768, 1843
AjuI	GAANNNNNNNTTGG	2 cut(s)	1430, 1462
AluBI	AGCT	7 cut(s)	597, 652, 988, 1355, 1397, 1480, 1810
AluI	AGCT	7 cut(s)	597, 652, 988, 1355, 1397, 1480, 1810
Alw21I	GWGCWC	1 cut(s)	348
Alw26I	GTCTC	4 cut(s)	767, 1241, 1691, 1918
Alw44I	GTGCAC	1 cut(s)	344
AlwI	GGATC	5 cut(s)	1478, 1675, 1842, 1855, 1868
Ama87I	CYCGRG	1 cut(s)	117
AoxI	GGCC	5 cut(s)	33, 565, 733, 1330, 1498
ApaLI	GTGCAC	1 cut(s)	344
ApoI	RAATTY	2 cut(s)	144, 1099
AsiGI	ACCGGT	1 cut(s)	1956
AspLEI	GCGC	2 cut(s)	1454, 1828
AspS9I	GGNCC	5 cut(s)	193, 274, 733, 1499, 1765
AsuHPI	GGTGA	4 cut(s)	577, 1600, 1655, 1898
AvaI	CYCGRG	1 cut(s)	117
AvaII	GGWCC	3 cut(s)	193, 274, 1765
AxyI	CCTNAGG	1 cut(s)	525
BaeGI	GKGCMC	2 cut(s)	348, 704
BaeI	ACNNNNGTAYC	4 cut(s)	292, 325, 675, 708
BamHI	GGATCC	1 cut(s)	1847
BanI	GGYRCC	1 cut(s)	1418
BanII	GRGCYC	1 cut(s)	1411
BarI	GAAGNNNNNNTAC	2 cut(s)	1668, 1700
BbsI	GAAGAC	3 cut(s)	165, 441, 1334
Bbv12I	GWGCWC	1 cut(s)	348
BccI	CCATC	4 cut(s)	310, 395, 407, 1971
BceAI	ACGGC	2 cut(s)	658, 1317
BciT130I	CCWGG	3 cut(s)	569, 770, 1845
BciVI	GTATCC	2 cut(s)	1109, 1721
BclI	TGATCA	1 cut(s)	454
BcoDI	GTCTC	4 cut(s)	767, 1241, 1691, 1918
BfaI	CTAG	7 cut(s)	465, 594, 726, 819, 903, 1743, 1817
BfmI	CTRYAG	4 cut(s)	1222, 1292, 1392, 1423
BfoI	RGCGCY	1 cut(s)	1455
BfrI	CTTAAG	1 cut(s)	668
BfuAI	ACCTGC	2 cut(s)	1328, 1609
BfuI	GTATCC	2 cut(s)	1109, 1721
BlpI	GCTNAGC	1 cut(s)	984
Bme1390I	CCNGG	3 cut(s)	569, 770, 1845
Bme18I	GGWCC	3 cut(s)	193, 274, 1765
BmeT110I	CYCGRG	1 cut(s)	117
BmgT120I	GGNCC	5 cut(s)	193, 274, 733, 1499, 1765
BmiI	GGNNCC	8 cut(s)	262, 573, 734, 1408, 1420, 1501, 1849, 1961
BmrFI	CCNGG	3 cut(s)	569, 770, 1845
BmrI	ACTGGG	1 cut(s)	745
BmsI	GCATC	5 cut(s)	520, 852, 1039, 1419, 1648
BmuI	ACTGGG	1 cut(s)	745
BpiI	GAAGAC	3 cut(s)	165, 441, 1334
BpmI	CTGGAG	2 cut(s)	791, 1827
Bpu10I	CCTNAGC	1 cut(s)	866
Bpu1102I	GCTNAGC	1 cut(s)	984
BpuEI	CTTGAG	1 cut(s)	813
BsaAI	YACGTR	1 cut(s)	1309
BsaHI	GRCGYC	1 cut(s)	107
BsaI	GGTCTC	2 cut(s)	767, 1241
BsaJI	CCNNGG	4 cut(s)	30, 264, 562, 768
BsaWI	WCCGGW	2 cut(s)	276, 1956
Bsc4I	CCNNNNNNNGG	6 cut(s)	190, 220, 568, 930, 1128, 1857
Bse118I	RCCGGY	1 cut(s)	1956
Bse1I	ACTGG	4 cut(s)	167, 751, 924, 1117
Bse21I	CCTNAGG	1 cut(s)	525
Bse3DI	GCAATG	1 cut(s)	1981
BseBI	CCWGG	3 cut(s)	569, 770, 1845
BseDI	CCNNGG	4 cut(s)	30, 264, 562, 768
BseGI	GGATG	9 cut(s)	180, 354, 387, 399, 535, 748, 1054, 1249, 1434
BseLI	CCNNNNNNNGG	6 cut(s)	190, 220, 568, 930, 1128, 1857
BseMI	GCAATG	1 cut(s)	1981
BseMII	CTCAG	4 cut(s)	539, 859, 880, 1160
BseNI	ACTGG	4 cut(s)	167, 751, 924, 1117
BseRI	GAGGAG	1 cut(s)	548
BseSI	GKGCMC	2 cut(s)	348, 704
BseYI	CCCAGC	2 cut(s)	809, 1122
BsgI	GTGCAG	3 cut(s)	112, 948, 1356
Bsh1236I	CGCG	1 cut(s)	258
BshFI	GGCC	5 cut(s)	35, 567, 735, 1332, 1500
BshNI	GGYRCC	1 cut(s)	1418
BshTI	ACCGGT	1 cut(s)	1956
BsiHKAI	GWGCWC	1 cut(s)	348
BsiHKCI	CYCGRG	1 cut(s)	117
BsiSI	CCGG	2 cut(s)	277, 1957
BslFI	GGGAC	2 cut(s)	1263, 1718
BslI	CCNNNNNNNGG	6 cut(s)	190, 220, 568, 930, 1128, 1857
BsmAI	GTCTC	4 cut(s)	767, 1241, 1691, 1918
BsmBI	CGTCTC	2 cut(s)	1691, 1918
BsmFI	GGGAC	2 cut(s)	1263, 1718
BsmI	GAATGC	3 cut(s)	69, 802, 1633
BsnI	GGCC	5 cut(s)	35, 567, 735, 1332, 1500
Bso31I	GGTCTC	2 cut(s)	767, 1241
BsoBI	CYCGRG	1 cut(s)	117
Bsp1286I	GDGCHC	3 cut(s)	348, 704, 1411
Bsp1407I	TGTACA	3 cut(s)	45, 285, 1147
Bsp143I	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
Bsp1720I	GCTNAGC	1 cut(s)	984
BspACI	CCGC	7 cut(s)	92, 258, 272, 423, 1153, 1667, 1972
BspANI	GGCC	5 cut(s)	35, 567, 735, 1332, 1500
BspCNI	CTCAG	4 cut(s)	538, 858, 879, 1161
BspFNI	CGCG	1 cut(s)	258
BspLI	GGNNCC	8 cut(s)	262, 573, 734, 1408, 1420, 1501, 1849, 1961
BspMAI	CTGCAG	3 cut(s)	1226, 1296, 1396
BspMI	ACCTGC	2 cut(s)	1328, 1609
BspPI	GGATC	5 cut(s)	1478, 1675, 1842, 1855, 1868
BspT107I	GGYRCC	1 cut(s)	1418
BspTI	CTTAAG	1 cut(s)	668
BspTNI	GGTCTC	2 cut(s)	767, 1241
BsrDI	GCAATG	1 cut(s)	1981
BsrFI	RCCGGY	1 cut(s)	1956
BsrGI	TGTACA	3 cut(s)	45, 285, 1147
BsrI	ACTGG	4 cut(s)	167, 751, 924, 1117
BssAI	RCCGGY	1 cut(s)	1956
BssECI	CCNNGG	4 cut(s)	30, 264, 562, 768
BssMI	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
BssNI	GRCGYC	1 cut(s)	107
BssT1I	CCWWGG	2 cut(s)	30, 264
Bst2UI	CCWGG	3 cut(s)	569, 770, 1845
Bst4CI	ACNGT	3 cut(s)	99, 677, 1147
Bst6I	CTCTTC	1 cut(s)	1017
BstACI	GRCGYC	1 cut(s)	107
BstAFI	CTTAAG	1 cut(s)	668
BstAUI	TGTACA	3 cut(s)	45, 285, 1147
BstBAI	YACGTR	1 cut(s)	1309
BstC8I	GCNNGC	7 cut(s)	348, 647, 816, 840, 1222, 1537, 1812
BstDEI	CTNAG	5 cut(s)	525, 845, 866, 984, 1169
BstDSI	CCRYGG	1 cut(s)	562
BstF5I	GGATG	9 cut(s)	180, 354, 387, 399, 535, 748, 1054, 1249, 1434
BstFNI	CGCG	1 cut(s)	258
BstH2I	RGCGCY	1 cut(s)	1455
BstHHI	GCGC	2 cut(s)	1454, 1828
BstKTI	GATC	9 cut(s)	457, 520, 759, 1324, 1351, 1486, 1683, 1850, 1863
BstMAI	GTCTC	4 cut(s)	767, 1241, 1691, 1918
BstMBI	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
BstMWI	GCNNNNNNNGC	7 cut(s)	119, 614, 646, 806, 815, 824, 1460
BstNI	CCWGG	3 cut(s)	569, 770, 1845
BstNSI	RCATGY	6 cut(s)	412, 721, 818, 842, 1024, 1642
BstSCI	CCNGG	3 cut(s)	567, 768, 1843
BstSFI	CTRYAG	4 cut(s)	1222, 1292, 1392, 1423
BstSLI	GKGCMC	2 cut(s)	348, 704
BstUI	CGCG	1 cut(s)	258
BstV2I	GAAGAC	3 cut(s)	165, 441, 1334
BstX2I	RGATCY	2 cut(s)	1680, 1847
BstYI	RGATCY	2 cut(s)	1680, 1847
Bsu36I	CCTNAGG	1 cut(s)	525
BsuI	GTATCC	2 cut(s)	1109, 1721
BsuRI	GGCC	5 cut(s)	35, 567, 735, 1332, 1500
BtgI	CCRYGG	1 cut(s)	562
BtsCI	GGATG	9 cut(s)	180, 354, 387, 399, 535, 748, 1054, 1249, 1434
BtsI	GCAGTG	1 cut(s)	1389
BtsIMutI	CAGTG	2 cut(s)	931, 1389
BveI	ACCTGC	2 cut(s)	1328, 1609
Cac8I	GCNNGC	7 cut(s)	348, 647, 816, 840, 1222, 1537, 1812
CfoI	GCGC	2 cut(s)	1454, 1828
Cfr10I	RCCGGY	1 cut(s)	1956
Cfr13I	GGNCC	5 cut(s)	193, 274, 733, 1499, 1765
CpoI	CGGWCCG	1 cut(s)	274
CseI	GACGC	3 cut(s)	446, 895, 1559
Csp6I	GTAC	9 cut(s)	40, 46, 166, 286, 309, 673, 1148, 1795, 1909
CspAI	ACCGGT	1 cut(s)	1956
CspCI	CAANNNNNGTGG	2 cut(s)	932, 967
CspI	CGGWCCG	1 cut(s)	274
CviQI	GTAC	9 cut(s)	40, 46, 166, 286, 309, 673, 1148, 1795, 1909
DdeI	CTNAG	5 cut(s)	525, 845, 866, 984, 1169
DpnI	GATC	9 cut(s)	456, 519, 758, 1323, 1350, 1485, 1682, 1849, 1862
DpnII	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
DraI	TTTAAA	2 cut(s)	373, 880
DraIII	CACNNNGTG	1 cut(s)	1309
EaeI	YGGCCR	1 cut(s)	1330
Eam1104I	CTCTTC	1 cut(s)	1017
EarI	CTCTTC	1 cut(s)	1017
Eco130I	CCWWGG	2 cut(s)	30, 264
Eco147I	AGGCCT	1 cut(s)	35
Eco24I	GRGCYC	1 cut(s)	1411
Eco31I	GGTCTC	2 cut(s)	767, 1241
Eco47I	GGWCC	3 cut(s)	193, 274, 1765
Eco57I	CTGAAG	1 cut(s)	1670
Eco81I	CCTNAGG	1 cut(s)	525
Eco88I	CYCGRG	1 cut(s)	117
EcoO109I	RGGNCCY	2 cut(s)	193, 1499
EcoRI	GAATTC	1 cut(s)	1099
EcoRII	CCWGG	3 cut(s)	567, 768, 1843
EcoT14I	CCWWGG	2 cut(s)	30, 264
EcoT38I	GRGCYC	1 cut(s)	1411
ErhI	CCWWGG	2 cut(s)	30, 264
Esp3I	CGTCTC	2 cut(s)	1691, 1918
FalI	AAGNNNNNCTT	2 cut(s)	366, 398
FaqI	GGGAC	2 cut(s)	1263, 1718
FauI	CCCGC	1 cut(s)	1674
FauNDI	CATATG	1 cut(s)	738
FbaI	TGATCA	1 cut(s)	454
FokI	GGATG	9 cut(s)	167, 341, 374, 386, 542, 755, 1061, 1256, 1441
FriOI	GRGCYC	1 cut(s)	1411
FspBI	CTAG	7 cut(s)	465, 594, 726, 819, 903, 1743, 1817
GlaI	GCGC	2 cut(s)	1453, 1827
GsaI	CCCAGC	2 cut(s)	813, 1126
GsuI	CTGGAG	2 cut(s)	791, 1827
HaeII	RGCGCY	1 cut(s)	1455
HaeIII	GGCC	5 cut(s)	35, 567, 735, 1332, 1500
HapII	CCGG	2 cut(s)	277, 1957
HgaI	GACGC	3 cut(s)	446, 895, 1559
HhaI	GCGC	2 cut(s)	1454, 1828
Hin1I	GRCGYC	1 cut(s)	107
Hin6I	GCGC	2 cut(s)	1452, 1826
HinP1I	GCGC	2 cut(s)	1452, 1826
HindIII	AAGCTT	2 cut(s)	986, 1808
HinfI	GANTC	6 cut(s)	134, 280, 746, 764, 1179, 1493
HpaII	CCGG	2 cut(s)	277, 1957
HphI	GGTGA	4 cut(s)	577, 1600, 1655, 1898
Hpy166II	GTNNAC	6 cut(s)	346, 585, 715, 958, 1636, 1765
Hpy188I	TCNGA	6 cut(s)	75, 139, 151, 625, 1689, 1860
Hpy188III	TCNNGA	9 cut(s)	6, 222, 242, 527, 856, 1003, 1016, 1346, 1864
Hpy8I	GTNNAC	6 cut(s)	346, 585, 715, 958, 1636, 1765
HpyAV	CCTTC	8 cut(s)	46, 146, 206, 392, 817, 866, 1694, 1919
HpyCH4III	ACNGT	3 cut(s)	99, 677, 1147
HpyCH4IV	ACGT	5 cut(s)	107, 1308, 1468, 1731, 1911
HpyF10VI	GCNNNNNNNGC	7 cut(s)	119, 614, 646, 806, 815, 824, 1460
HpyF3I	CTNAG	5 cut(s)	525, 845, 866, 984, 1169
HpySE526I	ACGT	5 cut(s)	107, 1308, 1468, 1731, 1911
Hsp92I	GRCGYC	1 cut(s)	107
HspAI	GCGC	2 cut(s)	1452, 1826
Ksp22I	TGATCA	1 cut(s)	454
Kzo9I	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
LmnI	GCTCC	3 cut(s)	561, 940, 1406
LweI	GCATC	5 cut(s)	520, 852, 1039, 1419, 1648
MaeI	CTAG	7 cut(s)	465, 594, 726, 819, 903, 1743, 1817
MaeII	ACGT	5 cut(s)	107, 1308, 1468, 1731, 1911
MaeIII	GTNAC	6 cut(s)	294, 443, 478, 1277, 1309, 1547
MalI	GATC	9 cut(s)	456, 519, 758, 1323, 1350, 1485, 1682, 1849, 1862
MboI	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
MfeI	CAATTG	1 cut(s)	1314
MflI	RGATCY	2 cut(s)	1680, 1847
MhlI	GDGCHC	3 cut(s)	348, 704, 1411
MluCI	AATT	6 cut(s)	144, 217, 339, 1099, 1173, 1314
MlyI	GAGTC	3 cut(s)	128, 274, 758
MmeI	TCCRAC	1 cut(s)	1207
MseI	TTAA	8 cut(s)	252, 372, 405, 669, 879, 1544, 1716, 1833
MslI	CAYNNNNRTG	2 cut(s)	741, 1643
MspA1I	CMGCKG	2 cut(s)	1153, 1397
MspCI	CTTAAG	1 cut(s)	668
MspI	CCGG	2 cut(s)	277, 1957
MspR9I	CCNGG	3 cut(s)	569, 770, 1845
MunI	CAATTG	1 cut(s)	1314
Mva1269I	GAATGC	3 cut(s)	69, 802, 1633
MvaI	CCWGG	3 cut(s)	569, 770, 1845
MvnI	CGCG	1 cut(s)	258
MwoI	GCNNNNNNNGC	7 cut(s)	119, 614, 646, 806, 815, 824, 1460
NdeI	CATATG	1 cut(s)	738
NdeII	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
NlaIV	GGNNCC	8 cut(s)	262, 573, 734, 1408, 1420, 1501, 1849, 1961
NmuCI	GTSAC	3 cut(s)	478, 1309, 1547
NspI	RCATGY	6 cut(s)	412, 721, 818, 842, 1024, 1642
PaeI	GCATGC	2 cut(s)	818, 842
PceI	AGGCCT	1 cut(s)	35
PciI	ACATGT	4 cut(s)	408, 717, 1020, 1638
PctI	GAATGC	3 cut(s)	69, 802, 1633
PfeI	GAWTC	3 cut(s)	746, 1179, 1493
PflFI	GACNNNGTC	1 cut(s)	476
PfoI	TCCNGGA	1 cut(s)	1843
PinAI	ACCGGT	1 cut(s)	1956
PleI	GAGTC	3 cut(s)	128, 274, 758
PpsI	GAGTC	3 cut(s)	128, 274, 758
Ppu21I	YACGTR	1 cut(s)	1309
PpuMI	RGGWCCY	1 cut(s)	193
PscI	ACATGT	4 cut(s)	408, 717, 1020, 1638
Psp5II	RGGWCCY	1 cut(s)	193
Psp6I	CCWGG	3 cut(s)	567, 768, 1843
PspFI	CCCAGC	2 cut(s)	809, 1122
PspGI	CCWGG	3 cut(s)	567, 768, 1843
PspN4I	GGNNCC	8 cut(s)	262, 573, 734, 1408, 1420, 1501, 1849, 1961
PspPI	GGNCC	5 cut(s)	193, 274, 733, 1499, 1765
PspPPI	RGGWCCY	1 cut(s)	193
PstI	CTGCAG	3 cut(s)	1226, 1296, 1396
PsuI	RGATCY	2 cut(s)	1680, 1847
PsyI	GACNNNGTC	1 cut(s)	476
PvuII	CAGCTG	1 cut(s)	1397
RsaI	GTAC	9 cut(s)	41, 47, 167, 287, 310, 674, 1149, 1796, 1910
RsaNI	GTAC	9 cut(s)	40, 46, 166, 286, 309, 673, 1148, 1795, 1909
RseI	CAYNNNNRTG	2 cut(s)	741, 1643
Rsr2I	CGGWCCG	1 cut(s)	274
RsrII	CGGWCCG	1 cut(s)	274
SaqAI	TTAA	8 cut(s)	252, 372, 405, 669, 879, 1544, 1716, 1833
Sau3AI	GATC	9 cut(s)	454, 517, 756, 1321, 1348, 1483, 1680, 1847, 1860
Sau96I	GGNCC	5 cut(s)	193, 274, 733, 1499, 1765
SchI	GAGTC	3 cut(s)	128, 274, 758
ScrFI	CCNGG	3 cut(s)	569, 770, 1845
SduI	GDGCHC	3 cut(s)	348, 704, 1411
SfaNI	GCATC	5 cut(s)	520, 852, 1039, 1419, 1648
SfcI	CTRYAG	4 cut(s)	1222, 1292, 1392, 1423
SinI	GGWCC	3 cut(s)	193, 274, 1765
SmiMI	CAYNNNNRTG	2 cut(s)	741, 1643
SmlI	CTYRAG	2 cut(s)	668, 828
SmoI	CTYRAG	2 cut(s)	668, 828
SphI	GCATGC	2 cut(s)	818, 842
Sse9I	AATT	6 cut(s)	144, 217, 339, 1099, 1173, 1314
SseBI	AGGCCT	1 cut(s)	35
SsiI	CCGC	7 cut(s)	92, 258, 272, 423, 1153, 1667, 1972
SspI	AATATT	1 cut(s)	1256
SspMI	CTAG	7 cut(s)	465, 594, 726, 819, 903, 1743, 1817
StuI	AGGCCT	1 cut(s)	35
StyD4I	CCNGG	3 cut(s)	567, 768, 1843
StyI	CCWWGG	2 cut(s)	30, 264
TaaI	ACNGT	3 cut(s)	99, 677, 1147
TaiI	ACGT	5 cut(s)	110, 1311, 1471, 1734, 1914
TaqI	TCGA	2 cut(s)	520, 1351
TasI	AATT	6 cut(s)	144, 217, 339, 1099, 1173, 1314
TatI	WGTACW	4 cut(s)	39, 45, 285, 1147
TauI	GCSGC	1 cut(s)	95
TfiI	GAWTC	3 cut(s)	746, 1179, 1493
Tru1I	TTAA	8 cut(s)	252, 372, 405, 669, 879, 1544, 1716, 1833
Tru9I	TTAA	8 cut(s)	252, 372, 405, 669, 879, 1544, 1716, 1833
TscAI	CASTG	2 cut(s)	931, 1396
TseFI	GTSAC	3 cut(s)	478, 1309, 1547
Tsp45I	GTSAC	3 cut(s)	478, 1309, 1547
TspDTI	ATGAA	6 cut(s)	72, 224, 759, 1286, 1354, 1589
TspGWI	ACGGA	2 cut(s)	146, 551
TspRI	CASTG	2 cut(s)	931, 1396
Tth111I	GACNNNGTC	1 cut(s)	476
Vha464I	CTTAAG	1 cut(s)	668
VneI	GTGCAC	1 cut(s)	344
VpaK11BI	GGWCC	3 cut(s)	193, 274, 1765
XapI	RAATTY	2 cut(s)	144, 1099
XceI	RCATGY	6 cut(s)	412, 721, 818, 842, 1024, 1642
XcmI	CCANNNNNNNNNTGG	2 cut(s)	694, 1130
XspI	CTAG	7 cut(s)	465, 594, 726, 819, 903, 1743, 1817
ZraI	GACGTC	1 cut(s)	108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.