Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0017537

Physical Location & Seq

Genomic Coordinates Reverse (-)

187368 .. 189377

Gene Structure 2010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G000160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGAAGAGACAGATTTTGTGTAGTCAATCCAAGGCCTTATTATTGTTGTACTTGTACAAGTACAACAATGCTGCTGCTCTTCCTAGTGTTGGTATTCGGAAACTTCCATTATCGGCGCAGATGGGCAGCTCTGCCACTCCGGCTGACTCGTACATTTCAGAAGGCGAAGACCATATCATCCAAGACAAGGACCTTCTCCGCCTCACAGATTCGGGAACAACAGGGGGGCTCCATGTTCTGGAGGATTTGGTTAATCGTGCTTCTTTGGAAGCTGACCGGACCCTGTGCAATAAGCTGCTTAACAAATGTACCCAGACTGGCCAACTTAAACAGGCCAAAATTGTCCATGCTCACATCCTTACTTCCATGTTCAACGATGACCTTCCCATCCACAACACCATTCTCAACACGTACGTCAAGTGCGGCAGCTTGGACGACGCCCAGAAGTTGTTCGATGAAATGCCTCACAGGGATTTGGTCACCTGGACAGCCTTGATCTCTGGCTATTCTCAACATGATCGACCTGAGGAAGCACTTGTTCTGTTTCCTCAAATGCTTCGCCATGGACTGCAACCCAACCAGTTCACGCTGTCTAGCTTGCTCAAGGCTGCTGGTGCCGGGCCTGACCCTGATGATAAGCACGGCAGGCAGCTTCATGCCCATTGCTTCAAGTGCGGTTTTGATTCCAATGTTTATGTGGGCACTTCTCTCGTGGACATGTATGCTAGGTGTGGCCGTATGGACGAATCCCAGATCATCTTTGACGCTCTCGACACCAAGAATGAGGTGTCTTGGAATGCTTTGATCGCCGGGCATGCTAGGAAGGGTCAAGGAGAGCATGCTCTGAGGTTGTTCTGGAAGATGCTGAGGGGAGGATTCAAGCCCACTCATTTCACTTATTCTAGTGTGTTTACTGTTTGTGCCAGTGCAGGGTCTATGGAGCAAGGTAAGTGGGTTCACTCCCATATGATCAAATCGGGTGTTAACCTTGTTGCTTTTGTTGGGAATACTCTTCTCGACATGTATGCCAAGTCAGGCAGCATTGATGATGCTAAAAAGGTATTTGACCGGTTGGTTAGACGAGACATTGTTTCTTGGAATTCGATGCTTACTGGATACTCCCAGCATGGGCTTGGGAAGGAAACTGTGCAGCTGTTTGAACAAATGCTTAGGATTGGAATTCAACCTAATGATATAACATTCCTCTGTGTTCTTACTGCCTGTAGCCATGCTCGCCTCTTGGATGAAGGACAGTATTATTTTCACTTGATGAGGAAAAGGTTCAAAATAGAACCACAGGTTTGGCATTACGTTACAATGGTTGATCTTCTTGGCCGAGCAGGTCTTCTTGATAGAGCTGACAAGTTCATAAGAGAAATGCCGATTGAACCCACTGCAGCTGTCTGGGGAGCCTTGCTAGGCGCTTGTAGGATGCACAACAACATCGACTTGGGTGCCTATGCTGCTGAGCGTGCTTTTGAGCTTGATCCTTATGATTCAGGACCCTATATTATACTCGCTAATATGTACGCATCTGCTGGAAGATTGAATGATGCTGCAAAAGTGAGAAAGATGATGAAAGAGAGTGGGGTGAAAAAGGAACCTGCCTGTAGTTGGGTGGAGATTGAGAATGCAGTCCACATGTTTGTGGCAAACGATGATGCACACCCGCAAAGAGCAGAGATATATAGGATGTGGGAGATGATTAGCAAGAAGATAAAGGAGGTCGGATACGTTCCAGACACTAGCCATGTACTCTTCTTTGTGGACCAGCAGGAGAGGGAAGTCAAGTTGCAGTTTCACAGTGAGAAGCTTGCACTCGCATTTGCGCTTCTTAACACTTCTCCTGGATCCACCATCCGGATCAAGAAGAACATCAGGGTTTGTGGTGATTGTCATTCGGCAATCAAGTACGTCTCAAAGATGGAAAGGCGAGAAATCATTGTGAGAGACACCAATCGGTTCCATCATTTCCGTGATGGCTCTTGTTCTTGTGGGGACTATTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

669

Amino Acids

75.43

Weight (kDa)

8.21

Isoelectric Point (pI)

37.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	158 - 203	4.9e-12	PPR repeat family
PPR	PF01535	160 - 190	8.1e-08	PPR repeat
PPR_2	PF13041	261 - 308	5.1e-13	PPR repeat family
PPR	PF01535	263 - 293	1.2e-06	PPR repeat
PPR_2	PF13041	361 - 409	1.1e-11	PPR repeat family
PPR	PF01535	364 - 394	5.3e-07	PPR repeat
E_motif	PF20431	479 - 541	7.8e-21	E motif
DYW_deaminase	PF14432	577 - 669	2.1e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017537)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24000
fragaria_vesca	FvH4_3g00130
malus_domestica	MD05G1044700.v1.1
prunus_persica	Prupe.4G001500_v2.0.a1
pyrus_communis	pycom05g03730
rosa_chinensis	RchiOBHm_Chr5g0000171
rosa_laevigata	RLG00000030847
rosa_multiflora	Rmu_ssc0000243.1_g000013
rosa_roxburghii	Rroxscaffold_1G00075920
rosa_rugosa	Rorug04G0382100
rosa_samantha	Rh5CG001500
rosa_wichuraiana	Rw5G000160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1331, 1612
AccB1I	GGYRCC	2 cut(s)	614, 1454
AccB7I	CCANNNNNTGG	1 cut(s)	238
AccIII	TCCGGA	1 cut(s)	1860
AciI	CCGC	4 cut(s)	199, 423, 675, 1670
AclWI	GGATC	4 cut(s)	1481, 1845, 1858, 1871
AcoI	YGGCCR	3 cut(s)	319, 733, 1333
AcsI	RAATTY	2 cut(s)	1099, 1179
AcyI	GRCGYC	1 cut(s)	438
AfaI	GTAC	9 cut(s)	50, 56, 62, 152, 310, 413, 1529, 1755, 1913
AfiI	CCNNNNNNNGG	7 cut(s)	89, 187, 238, 930, 1128, 1614, 1860
AflIII	ACRYGT	4 cut(s)	408, 717, 1020, 1641
AgeI	ACCGGT	1 cut(s)	1068
AgsI	TTSAA	8 cut(s)	373, 670, 880, 1160, 1184, 1285, 1388, 1549
AjnI	CCWGG	2 cut(s)	482, 1846
Alw26I	GTCTC	3 cut(s)	1077, 1921, 1944
AlwI	GGATC	4 cut(s)	1481, 1845, 1858, 1871
Aor13HI	TCCGGA	1 cut(s)	1860
AoxI	GGCC	6 cut(s)	33, 319, 333, 620, 733, 1333
ApoI	RAATTY	2 cut(s)	1099, 1179
AsiGI	ACCGGT	1 cut(s)	1068
Asp700I	GAANNNNTTC	2 cut(s)	449, 1280
AspLEI	GCGC	3 cut(s)	118, 1424, 1831
AspS9I	GGNCC	5 cut(s)	190, 279, 620, 1502, 1768
AsuC2I	CCSGG	2 cut(s)	619, 811
AsuHPI	GGTGA	3 cut(s)	472, 1603, 1901
AvaII	GGWCC	4 cut(s)	190, 279, 1502, 1768
AxyI	CCTNAGG	1 cut(s)	525
BaeGI	GKGCMC	1 cut(s)	704
BaeI	ACNNNNGTAYC	2 cut(s)	292, 325
BalI	TGGCCA	1 cut(s)	321
BamHI	GGATCC	1 cut(s)	1850
BanI	GGYRCC	2 cut(s)	614, 1454
BanII	GRGCYC	1 cut(s)	231
BauI	CACGAG	1 cut(s)	710
BbsI	GAAGAC	2 cut(s)	174, 1337
BbvCI	CCTCAGC	1 cut(s)	866
BccI	CCATC	6 cut(s)	115, 395, 1865, 1918, 1973, 1974
BceAI	ACGGC	2 cut(s)	658, 720
BcgI	CGANNNNNNTGC	6 cut(s)	691, 725, 1007, 1041, 1436, 1470
BciT130I	CCWGG	2 cut(s)	484, 1848
BciVI	GTATCC	2 cut(s)	1109, 1724
BclI	TGATCA	1 cut(s)	969
BcnI	CCSGG	2 cut(s)	619, 811
BcoDI	GTCTC	3 cut(s)	1077, 1921, 1944
BfaI	CTAG	7 cut(s)	84, 594, 726, 819, 903, 1418, 1746
BfmI	CTRYAG	3 cut(s)	1222, 1395, 1609
BfoI	RGCGCY	1 cut(s)	1425
BfuAI	ACCTGC	2 cut(s)	1331, 1612
BfuI	GTATCC	2 cut(s)	1109, 1724
BglI	GCCNNNNNGGC	1 cut(s)	140
BlpI	GCTNAGC	1 cut(s)	1467
Bme1390I	CCNGG	4 cut(s)	484, 619, 811, 1848
Bme18I	GGWCC	4 cut(s)	190, 279, 1502, 1768
BmgT120I	GGNCC	5 cut(s)	190, 279, 620, 1502, 1768
BmiI	GGNNCC	9 cut(s)	230, 281, 616, 1411, 1456, 1504, 1602, 1852, 1964
BmrFI	CCNGG	4 cut(s)	484, 619, 811, 1848
BmsI	GCATC	7 cut(s)	852, 1039, 1095, 1422, 1541, 1543, 1651
BpiI	GAAGAC	2 cut(s)	174, 1337
BpmI	CTGGAG	1 cut(s)	260
Bpu10I	CCTNAGC	2 cut(s)	866, 1169
Bpu1102I	GCTNAGC	1 cut(s)	1467
BpuEI	CTTGAG	1 cut(s)	587
BpuMI	CCSGG	2 cut(s)	619, 811
BsaAI	YACGTR	1 cut(s)	411
BsaHI	GRCGYC	1 cut(s)	438
BsaJI	CCNNGG	2 cut(s)	30, 562
BsaWI	WCCGGW	3 cut(s)	276, 1068, 1860
Bsc4I	CCNNNNNNNGG	7 cut(s)	89, 187, 238, 930, 1128, 1614, 1860
Bse118I	RCCGGY	1 cut(s)	1068
Bse1I	ACTGG	4 cut(s)	322, 580, 924, 1117
Bse21I	CCTNAGG	1 cut(s)	525
Bse3DI	GCAATG	1 cut(s)	661
BseAI	TCCGGA	1 cut(s)	1860
BseBI	CCWGG	2 cut(s)	484, 1848
BseDI	CCNNGG	2 cut(s)	30, 562
BseGI	GGATG	7 cut(s)	177, 354, 387, 1249, 1437, 1698, 1857
BseLI	CCNNNNNNNGG	7 cut(s)	89, 187, 238, 930, 1128, 1614, 1860
BseMI	GCAATG	1 cut(s)	661
BseMII	CTCAG	4 cut(s)	516, 836, 857, 1458
BseNI	ACTGG	4 cut(s)	322, 580, 924, 1117
BseSI	GKGCMC	1 cut(s)	704
BseYI	CCCAGC	1 cut(s)	1122
BsgI	GTGCAG	2 cut(s)	948, 1169
BshFI	GGCC	6 cut(s)	35, 321, 335, 622, 735, 1335
BshNI	GGYRCC	2 cut(s)	614, 1454
BshTI	ACCGGT	1 cut(s)	1068
BsiSI	CCGG	6 cut(s)	140, 277, 618, 810, 1069, 1861
BsiWI	CGTACG	1 cut(s)	411
BslI	CCNNNNNNNGG	7 cut(s)	89, 187, 238, 930, 1128, 1614, 1860
BsmAI	GTCTC	3 cut(s)	1077, 1921, 1944
BsmBI	CGTCTC	1 cut(s)	1921
BsmI	GAATGC	2 cut(s)	802, 1636
BsnI	GGCC	6 cut(s)	35, 321, 335, 622, 735, 1335
Bsp1286I	GDGCHC	2 cut(s)	231, 704
Bsp13I	TCCGGA	1 cut(s)	1860
Bsp1407I	TGTACA	1 cut(s)	54
Bsp143I	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
Bsp1720I	GCTNAGC	1 cut(s)	1467
Bsp19I	CCATGG	1 cut(s)	562
BspACI	CCGC	4 cut(s)	199, 423, 675, 1670
BspANI	GGCC	6 cut(s)	35, 321, 335, 622, 735, 1335
BspCNI	CTCAG	4 cut(s)	517, 837, 858, 1459
BspEI	TCCGGA	1 cut(s)	1860
BspLI	GGNNCC	9 cut(s)	230, 281, 616, 1411, 1456, 1504, 1602, 1852, 1964
BspMAI	CTGCAG	1 cut(s)	1399
BspMI	ACCTGC	2 cut(s)	1331, 1612
BspPI	GGATC	4 cut(s)	1481, 1845, 1858, 1871
BspQI	GCTCTTC	1 cut(s)	84
BspT107I	GGYRCC	2 cut(s)	614, 1454
BsrDI	GCAATG	1 cut(s)	661
BsrFI	RCCGGY	1 cut(s)	1068
BsrGI	TGTACA	1 cut(s)	54
BsrI	ACTGG	4 cut(s)	322, 580, 924, 1117
BssAI	RCCGGY	1 cut(s)	1068
BssECI	CCNNGG	2 cut(s)	30, 562
BssMI	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
BssNI	GRCGYC	1 cut(s)	438
BssSI	CACGAG	1 cut(s)	710
BssT1I	CCWWGG	2 cut(s)	30, 562
Bst2BI	CACGAG	1 cut(s)	710
Bst2UI	CCWGG	2 cut(s)	484, 1848
Bst4CI	ACNGT	4 cut(s)	916, 1147, 1254, 1805
Bst6I	CTCTTC	3 cut(s)	84, 1017, 1763
BstACI	GRCGYC	1 cut(s)	438
BstAUI	TGTACA	1 cut(s)	54
BstBAI	YACGTR	1 cut(s)	411
BstC8I	GCNNGC	7 cut(s)	599, 647, 816, 840, 1234, 1473, 1815
BstDEI	CTNAG	5 cut(s)	525, 845, 866, 1169, 1467
BstDSI	CCRYGG	1 cut(s)	562
BstEII	GGTNACC	1 cut(s)	478
BstF5I	GGATG	7 cut(s)	177, 354, 387, 1249, 1437, 1698, 1857
BstH2I	RGCGCY	1 cut(s)	1425
BstHHI	GCGC	3 cut(s)	118, 1424, 1831
BstKTI	GATC	9 cut(s)	498, 520, 756, 807, 972, 1327, 1489, 1853, 1866
BstMAI	GTCTC	3 cut(s)	1077, 1921, 1944
BstMBI	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
BstMWI	GCNNNNNNNGC	9 cut(s)	140, 614, 646, 672, 806, 815, 1233, 1463, 1472
BstNI	CCWGG	2 cut(s)	484, 1848
BstNSI	RCATGY	5 cut(s)	721, 818, 842, 1024, 1645
BstPI	GGTNACC	1 cut(s)	478
BstSCI	CCNGG	4 cut(s)	482, 617, 809, 1846
BstSFI	CTRYAG	3 cut(s)	1222, 1395, 1609
BstSLI	GKGCMC	1 cut(s)	704
BstV2I	GAAGAC	2 cut(s)	174, 1337
BstX2I	RGATCY	1 cut(s)	1850
BstXI	CCANNNNNNTGG	1 cut(s)	1302
BstYI	RGATCY	1 cut(s)	1850
Bsu36I	CCTNAGG	1 cut(s)	525
BsuI	GTATCC	2 cut(s)	1109, 1724
BsuRI	GGCC	6 cut(s)	35, 321, 335, 622, 735, 1335
BtgI	CCRYGG	1 cut(s)	562
BtsCI	GGATG	7 cut(s)	177, 354, 387, 1249, 1437, 1698, 1857
BtsI	GCAGTG	1 cut(s)	1392
BtsIMutI	CAGTG	3 cut(s)	931, 1392, 1810
BveI	ACCTGC	2 cut(s)	1331, 1612
Cac8I	GCNNGC	7 cut(s)	599, 647, 816, 840, 1234, 1473, 1815
CfoI	GCGC	3 cut(s)	118, 1424, 1831
Cfr10I	RCCGGY	1 cut(s)	1068
Cfr13I	GGNCC	5 cut(s)	190, 279, 620, 1502, 1768
CseI	GACGC	2 cut(s)	446, 773
Csp6I	GTAC	9 cut(s)	49, 55, 61, 151, 309, 412, 1528, 1754, 1912
CspAI	ACCGGT	1 cut(s)	1068
CspCI	CAANNNNNGTGG	2 cut(s)	932, 967
CviQI	GTAC	9 cut(s)	49, 55, 61, 151, 309, 412, 1528, 1754, 1912
DdeI	CTNAG	5 cut(s)	525, 845, 866, 1169, 1467
DpnI	GATC	9 cut(s)	497, 519, 755, 806, 971, 1326, 1488, 1852, 1865
DpnII	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
EaeI	YGGCCR	3 cut(s)	319, 733, 1333
Eam1104I	CTCTTC	3 cut(s)	84, 1017, 1763
EarI	CTCTTC	3 cut(s)	84, 1017, 1763
EciI	GGCGGA	1 cut(s)	188
Eco130I	CCWWGG	2 cut(s)	30, 562
Eco147I	AGGCCT	1 cut(s)	35
Eco24I	GRGCYC	1 cut(s)	231
Eco47I	GGWCC	4 cut(s)	190, 279, 1502, 1768
Eco81I	CCTNAGG	1 cut(s)	525
Eco91I	GGTNACC	1 cut(s)	478
EcoO109I	RGGNCCY	2 cut(s)	190, 1502
EcoO65I	GGTNACC	1 cut(s)	478
EcoRI	GAATTC	2 cut(s)	1099, 1179
EcoRII	CCWGG	2 cut(s)	482, 1846
EcoT14I	CCWWGG	2 cut(s)	30, 562
EcoT38I	GRGCYC	1 cut(s)	231
ErhI	CCWWGG	2 cut(s)	30, 562
Esp3I	CGTCTC	1 cut(s)	1921
FauI	CCCGC	1 cut(s)	1677
FauNDI	CATATG	1 cut(s)	966
FbaI	TGATCA	1 cut(s)	969
FokI	GGATG	7 cut(s)	164, 341, 374, 1256, 1444, 1705, 1844
FriOI	GRGCYC	1 cut(s)	231
FspBI	CTAG	7 cut(s)	84, 594, 726, 819, 903, 1418, 1746
GlaI	GCGC	3 cut(s)	117, 1423, 1830
GsaI	CCCAGC	1 cut(s)	1126
GsuI	CTGGAG	1 cut(s)	260
HaeII	RGCGCY	1 cut(s)	1425
HaeIII	GGCC	6 cut(s)	35, 321, 335, 622, 735, 1335
HapII	CCGG	6 cut(s)	140, 277, 618, 810, 1069, 1861
HgaI	GACGC	2 cut(s)	446, 773
HhaI	GCGC	3 cut(s)	118, 1424, 1831
Hin1I	GRCGYC	1 cut(s)	438
Hin6I	GCGC	3 cut(s)	116, 1422, 1829
HinP1I	GCGC	3 cut(s)	116, 1422, 1829
HincII	GTYRAC	1 cut(s)	985
HindII	GTYRAC	1 cut(s)	985
HindIII	AAGCTT	1 cut(s)	1811
HinfI	GANTC	6 cut(s)	146, 209, 683, 746, 876, 1496
HpaI	GTTAAC	1 cut(s)	985
HpaII	CCGG	6 cut(s)	140, 277, 618, 810, 1069, 1861
HphI	GGTGA	3 cut(s)	472, 1603, 1901
Hpy166II	GTNNAC	7 cut(s)	585, 715, 912, 958, 985, 1639, 1768
Hpy188I	TCNGA	4 cut(s)	99, 160, 846, 1730
Hpy8I	GTNNAC	7 cut(s)	585, 715, 912, 958, 985, 1639, 1768
Hpy99I	CGWCG	1 cut(s)	440
HpyAV	CCTTC	6 cut(s)	155, 203, 392, 817, 1132, 1241
HpyCH4III	ACNGT	4 cut(s)	916, 1147, 1254, 1805
HpyCH4IV	ACGT	5 cut(s)	410, 414, 1311, 1734, 1914
HpyF10VI	GCNNNNNNNGC	9 cut(s)	140, 614, 646, 672, 806, 815, 1233, 1463, 1472
HpyF3I	CTNAG	5 cut(s)	525, 845, 866, 1169, 1467
HpySE526I	ACGT	5 cut(s)	410, 414, 1311, 1734, 1914
Hsp92I	GRCGYC	1 cut(s)	438
HspAI	GCGC	3 cut(s)	116, 1422, 1829
Kpn2I	TCCGGA	1 cut(s)	1860
Ksp22I	TGATCA	1 cut(s)	969
KspAI	GTTAAC	1 cut(s)	985
Kzo9I	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
LguI	GCTCTTC	1 cut(s)	84
LmnI	GCTCC	3 cut(s)	234, 940, 1409
LweI	GCATC	7 cut(s)	852, 1039, 1095, 1422, 1541, 1543, 1651
MaeI	CTAG	7 cut(s)	84, 594, 726, 819, 903, 1418, 1746
MaeII	ACGT	5 cut(s)	410, 414, 1311, 1734, 1914
MaeIII	GTNAC	2 cut(s)	478, 1312
MalI	GATC	9 cut(s)	497, 519, 755, 806, 971, 1326, 1488, 1852, 1865
MboI	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
MflI	RGATCY	1 cut(s)	1850
MhlI	GDGCHC	2 cut(s)	231, 704
MlsI	TGGCCA	1 cut(s)	321
MluCI	AATT	3 cut(s)	339, 1099, 1179
MluNI	TGGCCA	1 cut(s)	321
MlyI	GAGTC	1 cut(s)	140
MmeI	TCCRAC	1 cut(s)	1708
Mox20I	TGGCCA	1 cut(s)	321
MroI	TCCGGA	1 cut(s)	1860
MroXI	GAANNNNTTC	2 cut(s)	449, 1280
MscI	TGGCCA	1 cut(s)	321
MseI	TTAA	5 cut(s)	252, 300, 327, 984, 1836
MslI	CAYNNNNRTG	2 cut(s)	1646, 1974
Msp20I	TGGCCA	1 cut(s)	321
MspA1I	CMGCKG	2 cut(s)	1153, 1400
MspI	CCGG	6 cut(s)	140, 277, 618, 810, 1069, 1861
MspR9I	CCNGG	4 cut(s)	484, 619, 811, 1848
Mva1269I	GAATGC	2 cut(s)	802, 1636
MvaI	CCWGG	2 cut(s)	484, 1848
MwoI	GCNNNNNNNGC	9 cut(s)	140, 614, 646, 672, 806, 815, 1233, 1463, 1472
NciI	CCSGG	2 cut(s)	619, 811
NcoI	CCATGG	1 cut(s)	562
NdeI	CATATG	1 cut(s)	966
NdeII	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
NlaIV	GGNNCC	9 cut(s)	230, 281, 616, 1411, 1456, 1504, 1602, 1852, 1964
NmeAIII	GCCGAG	1 cut(s)	1361
NmuCI	GTSAC	1 cut(s)	478
NspI	RCATGY	5 cut(s)	721, 818, 842, 1024, 1645
PaeI	GCATGC	2 cut(s)	818, 842
PceI	AGGCCT	1 cut(s)	35
PciI	ACATGT	3 cut(s)	717, 1020, 1641
PciSI	GCTCTTC	1 cut(s)	84
PctI	GAATGC	2 cut(s)	802, 1636
PdmI	GAANNNNTTC	2 cut(s)	449, 1280
PfeI	GAWTC	5 cut(s)	209, 683, 746, 876, 1496
Pfl23II	CGTACG	1 cut(s)	411
PflMI	CCANNNNNTGG	1 cut(s)	238
PfoI	TCCNGGA	1 cut(s)	1846
PinAI	ACCGGT	1 cut(s)	1068
PleI	GAGTC	1 cut(s)	140
PpsI	GAGTC	1 cut(s)	140
Ppu21I	YACGTR	1 cut(s)	411
PpuMI	RGGWCCY	2 cut(s)	190, 1502
PscI	ACATGT	3 cut(s)	717, 1020, 1641
Psp5II	RGGWCCY	2 cut(s)	190, 1502
Psp6I	CCWGG	2 cut(s)	482, 1846
PspEI	GGTNACC	1 cut(s)	478
PspFI	CCCAGC	1 cut(s)	1122
PspGI	CCWGG	2 cut(s)	482, 1846
PspLI	CGTACG	1 cut(s)	411
PspN4I	GGNNCC	9 cut(s)	230, 281, 616, 1411, 1456, 1504, 1602, 1852, 1964
PspPI	GGNCC	5 cut(s)	190, 279, 620, 1502, 1768
PspPPI	RGGWCCY	2 cut(s)	190, 1502
PstI	CTGCAG	1 cut(s)	1399
PsuI	RGATCY	1 cut(s)	1850
PvuII	CAGCTG	2 cut(s)	1153, 1400
RsaI	GTAC	9 cut(s)	50, 56, 62, 152, 310, 413, 1529, 1755, 1913
RsaNI	GTAC	9 cut(s)	49, 55, 61, 151, 309, 412, 1528, 1754, 1912
RseI	CAYNNNNRTG	2 cut(s)	1646, 1974
SapI	GCTCTTC	1 cut(s)	84
SaqAI	TTAA	5 cut(s)	252, 300, 327, 984, 1836
Sau3AI	GATC	9 cut(s)	495, 517, 753, 804, 969, 1324, 1486, 1850, 1863
Sau96I	GGNCC	5 cut(s)	190, 279, 620, 1502, 1768
SchI	GAGTC	1 cut(s)	140
ScrFI	CCNGG	4 cut(s)	484, 619, 811, 1848
SduI	GDGCHC	2 cut(s)	231, 704
SfaNI	GCATC	7 cut(s)	852, 1039, 1095, 1422, 1541, 1543, 1651
SfcI	CTRYAG	3 cut(s)	1222, 1395, 1609
SinI	GGWCC	4 cut(s)	190, 279, 1502, 1768
SmiMI	CAYNNNNRTG	2 cut(s)	1646, 1974
SmlI	CTYRAG	1 cut(s)	602
SmoI	CTYRAG	1 cut(s)	602
SphI	GCATGC	2 cut(s)	818, 842
Sse9I	AATT	3 cut(s)	339, 1099, 1179
SseBI	AGGCCT	1 cut(s)	35
SsiI	CCGC	4 cut(s)	199, 423, 675, 1670
SspMI	CTAG	7 cut(s)	84, 594, 726, 819, 903, 1418, 1746
StuI	AGGCCT	1 cut(s)	35
StyD4I	CCNGG	4 cut(s)	482, 617, 809, 1846
StyI	CCWWGG	2 cut(s)	30, 562
TaaI	ACNGT	4 cut(s)	916, 1147, 1254, 1805
TaiI	ACGT	5 cut(s)	413, 417, 1314, 1737, 1917
TaqI	TCGA	6 cut(s)	453, 520, 771, 1017, 1103, 1446
TasI	AATT	3 cut(s)	339, 1099, 1179
TatI	WGTACW	4 cut(s)	48, 54, 60, 1753
TauI	GCSGC	1 cut(s)	426
TfiI	GAWTC	5 cut(s)	209, 683, 746, 876, 1496
Tru1I	TTAA	5 cut(s)	252, 300, 327, 984, 1836
Tru9I	TTAA	5 cut(s)	252, 300, 327, 984, 1836
TscAI	CASTG	3 cut(s)	931, 1399, 1810
TseFI	GTSAC	1 cut(s)	478
Tsp45I	GTSAC	1 cut(s)	478
TspDTI	ATGAA	6 cut(s)	17, 471, 644, 1260, 1357, 1592
TspGWI	ACGGA	1 cut(s)	1964
TspRI	CASTG	3 cut(s)	931, 1399, 1810
Van91I	CCANNNNNTGG	1 cut(s)	238
VpaK11BI	GGWCC	4 cut(s)	190, 279, 1502, 1768
XapI	RAATTY	2 cut(s)	1099, 1179
XceI	RCATGY	5 cut(s)	721, 818, 842, 1024, 1645
XcmI	CCANNNNNNNNNTGG	2 cut(s)	694, 1130
XmnI	GAANNNNTTC	2 cut(s)	449, 1280
XspI	CTAG	7 cut(s)	84, 594, 726, 819, 903, 1418, 1746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.