Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016517

Physical Location & Seq

Genomic Coordinates Forward (+)

8761419 .. 8763303

Gene Structure 1885 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G24220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGCAACACTCTCTTCGTTCTGATCTTCTTCCGACGAAGACTTCTCCTCGTTCTCATTTACTTCCACAACCCAAAAATGCAAATATTTCTCGACGAATTCTCATTAACCCTTTCAAGATACCGACACTTCCTGATCTCACTTCTCCGGTTCCGTCACCGGTTAAGCTCAAACCAACGTATCCAAACTTAAACCTTCTTCAGAAGCTAGCGGCTACGATGCTCGACAAGATTGAGTCCTCTATCGTTATTCCTATGGAGCAGAATCGCCCGCTTCCTAAACCGACCGACCCGGCGGTTCAATTATCAGGTAACTTCGCTCCGGTTAATGAATGTCCGGTTCAGAACGGTTTAGAAGTGGTTGGTCAGATTCCTTCTTGTCTAAAAGGAGTTTACATCCGTAACGGTGCAAACCCTATGTTTCCGCCGTTAGCCGGACATCATTTATTTGACGGTGACGGAATGATTCACGCCGTTAGTATCGGTTTTGATAACCAGGTTAGTTACAGCTGCCGGTACACTAAAACAAACCGGCTTGTTCAAGAAACCGCGCTTGGACGATCGGTTTTCCCTAAACCAATCGGCGAGCTTCACGGCCATTCCGGTCTAGCTCGACTCGCTCTCTTCACGGCTCGAGCTGGGATCGGTCTAGTGGACGGGACACGTGGCATGGGCGTAGCTAACGCCGGTGTGGTTTTCTTTAACGGCAGGTTATTAGCCATGTCAGAAGATGATCTTCCTTACCAAGTGAAGATCGACGGTCAAGGAGATCTTGAGACGATCGGACGGTTCGGATTCGATGACCAGATTGACTCTTCAGTGATAGCGCATCCTAAGGTGGACGCGACCACAGGAGATCTCCATACACTGAGCTACAACGTTTTGAAGAAACCTCATCTCAGGTATCTTAAATTCAACACGTGCGGGAAAAAGACACGTGACGTGGAGATCACGCTCCCTGAACCAACGATGATTCATGATTTCGCGATAACCGAGAATTTTGTCGTTATACCGGATCAGCAAATGGTATTCAAATTATCCGAAATGATTCGGGGCGGGTCACCCGTTATCTACGTTAAAGAAAAAATGGCGAGATTTGGAGTTTTGTCAAAGCAGGATCTGACCGGGTCGGATATAAATTGGGTTGATGTACCGGATTGTTTCTGTTTCCATCTATGGAATGCGTGGGAAGAGAGAACCGAAGAGGGAGACCCAGTTATCGTCGTAATCGGGTCATGTATGAGCCCACCCGACACGATCTTTAGTGAATCAGGAGAACCAACCCGGGTTGAATTAAGTGAGATCCGGTTAAACATGCGTACAAAAGAATCGAACCGTAAGGTTATCGTAACCGGAGTGAATTTAGAAGCGGGTCACATAAACCGTAGTTACGTGGGCCGGAAAAGCCAGTTCGTTTACATAGCAATAGCCGATCCTTGGCCCAAATGCAGTGGCATTGCGAAGGTAGATATACAAAACGGCACCGTTTCAGAGTTTAATTACGGACCGAGCCGGTTCGGTGGAGAACCGTGCTTTGTACCGGAGGGAGAAGGAGAAGAAGACAAAGGTTATGTAATGGGGTTTGTGAGAGACGAAGAGAAAGACGAGTCGGAGTTTGTGGTGGTCGACGCGACGGATATGAAGCAAGTCGCGGCGGTGCGCTTGCCGGAGAGGGTACCTTATGGTTTCCATGGAACGTTCGTGAGCGAGAATCAGTTGAAGGAACAAGTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009987 GO:0010114 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0031976 GO:0031984 GO:0032787 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

577

Amino Acids

63.82

Weight (kDa)

5.92

Isoelectric Point (pI)

38.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPE65	PF03055	105 - 568	6e-129	Retinal pigment epithelial membrane protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016517)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24220
fragaria_vesca	FvH4_4g05900
malus_domestica	MD16G1235500.v1.1
prunus_persica	Prupe.1G061300_v2.0.a1
pyrus_communis	pycom16g19710
rosa_chinensis	RchiOBHm_Chr4g0397001
rosa_laevigata	RLG00000009460
rosa_multiflora	Rmu_sc0002963.1_g000015
rosa_roxburghii	Rroxscaffold_5G00341990
rosa_rugosa	Rorug03G0345900
rosa_samantha	Rh4BG072400 Rh4CG080700 Rh4DG069800
rosa_wichuraiana	Rw4G006100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	696
Acc65I	GGTACC	1 cut(s)	1672
AccB1I	GGYRCC	2 cut(s)	1478, 1672
AccI	GTMKAC	1 cut(s)	1623
AccII	CGCG	5 cut(s)	548, 842, 983, 1628, 1649
AclI	AACGTT	2 cut(s)	876, 1694
AclWI	GGATC	5 cut(s)	647, 1020, 1122, 1294, 1424
AcoI	YGGCCR	1 cut(s)	592
AcsI	RAATTY	4 cut(s)	96, 908, 994, 1357
AcuI	CTGAAG	2 cut(s)	182, 798
AcvI	CACGTG	3 cut(s)	662, 918, 935
AfaI	GTAC	5 cut(s)	515, 1149, 1318, 1536, 1674
AfiI	CCNNNNNNNGG	2 cut(s)	431, 1434
AflIII	ACRYGT	3 cut(s)	659, 915, 932
AgeI	ACCGGT	1 cut(s)	157
AgsI	TTSAA	8 cut(s)	115, 299, 539, 883, 913, 1030, 1289, 1717
AjiI	CACGTC	1 cut(s)	940
AjnI	CCWGG	1 cut(s)	492
AjuI	GAANNNNNNNTTGG	2 cut(s)	534, 566
AluBI	AGCT	8 cut(s)	166, 205, 507, 586, 608, 635, 677, 870
AluI	AGCT	8 cut(s)	166, 205, 507, 586, 608, 635, 677, 870
Alw26I	GTCTC	3 cut(s)	767, 1200, 1581
AlwI	GGATC	5 cut(s)	647, 1020, 1122, 1294, 1424
AlwNI	CAGNNNCTG	1 cut(s)	1117
Ama87I	CYCGRG	2 cut(s)	630, 1281
AoxI	GGCC	3 cut(s)	592, 1393, 1436
ApeKI	GCWGC	1 cut(s)	507
ApoI	RAATTY	4 cut(s)	96, 908, 994, 1357
AsiGI	ACCGGT	1 cut(s)	157
Asp700I	GAANNNNTTC	1 cut(s)	1044
Asp718I	GGTACC	1 cut(s)	1672
AspLEI	GCGC	3 cut(s)	550, 826, 1659
AspS9I	GGNCC	3 cut(s)	1393, 1437, 1502
AsuC2I	CCSGG	4 cut(s)	290, 1123, 1282, 1283
AsuHPI	GGTGA	3 cut(s)	147, 464, 1050
AsuNHI	GCTAGC	1 cut(s)	205
AvaI	CYCGRG	2 cut(s)	630, 1281
AvaII	GGWCC	1 cut(s)	1502
AxyI	CCTNAGG	1 cut(s)	831
BaeI	ACNNNNGTAYC	2 cut(s)	161, 194
BanI	GGYRCC	2 cut(s)	1478, 1672
BanII	GRGCYC	1 cut(s)	1244
BbrPI	CACGTG	3 cut(s)	662, 918, 935
BbsI	GAAGAC	2 cut(s)	44, 1563
BbvI	GCAGC	1 cut(s)	494
BccI	CCATC	1 cut(s)	1176
BceAI	ACGGC	6 cut(s)	409, 455, 607, 642, 718, 1492
BciT130I	CCWGG	1 cut(s)	494
BciVI	GTATCC	1 cut(s)	189
BcnI	CCSGG	4 cut(s)	290, 1123, 1282, 1283
BcoDI	GTCTC	3 cut(s)	767, 1200, 1581
BfaI	CTAG	3 cut(s)	206, 605, 647
BfuAI	ACCTGC	1 cut(s)	696
BfuI	GTATCC	1 cut(s)	189
BglII	AGATCT	2 cut(s)	766, 853
BisI	GCNGC	3 cut(s)	210, 508, 1650
BlsI	GCNGC	3 cut(s)	211, 509, 1651
Bme1390I	CCNGG	5 cut(s)	290, 494, 1123, 1282, 1283
Bme18I	GGWCC	1 cut(s)	1502
BmeT110I	CYCGRG	2 cut(s)	630, 1281
BmgBI	CACGTC	1 cut(s)	940
BmgT120I	GGNCC	3 cut(s)	1393, 1437, 1502
BmiI	GGNNCC	3 cut(s)	150, 1480, 1674
BmrFI	CCNGG	5 cut(s)	290, 494, 1123, 1282, 1283
BmrI	ACTGGG	1 cut(s)	1205
BmsI	GCATC	2 cut(s)	207, 835
BmtI	GCTAGC	1 cut(s)	209
BmuI	ACTGGG	1 cut(s)	1205
BpiI	GAAGAC	2 cut(s)	44, 1563
BpuEI	CTTGAG	1 cut(s)	791
BpuMI	CCSGG	4 cut(s)	290, 1123, 1282, 1283
BsaAI	YACGTR	4 cut(s)	662, 918, 935, 1390
BsaI	GGTCTC	1 cut(s)	1200
BsaJI	CCNNGG	3 cut(s)	1281, 1433, 1687
BsaXI	ACNNNNNCTCC	2 cut(s)	1197, 1227
Bsc4I	CCNNNNNNNGG	2 cut(s)	431, 1434
Bse118I	RCCGGY	5 cut(s)	157, 510, 528, 683, 1509
Bse1I	ACTGG	2 cut(s)	1211, 1405
Bse21I	CCTNAGG	1 cut(s)	831
Bse3DI	GCAATG	1 cut(s)	1452
BseBI	CCWGG	1 cut(s)	494
BseDI	CCNNGG	3 cut(s)	1281, 1433, 1687
BseGI	GGATG	2 cut(s)	393, 826
BseLI	CCNNNNNNNGG	2 cut(s)	431, 1434
BseMI	GCAATG	1 cut(s)	1452
BseMII	CTCAG	2 cut(s)	857, 910
BseNI	ACTGG	2 cut(s)	1211, 1405
BseRI	GAGGAG	1 cut(s)	36
BseXI	GCAGC	1 cut(s)	494
BseYI	CCCAGC	1 cut(s)	635
Bsh1236I	CGCG	5 cut(s)	548, 842, 983, 1628, 1649
Bsh1285I	CGRYCG	3 cut(s)	285, 560, 780
BshFI	GGCC	3 cut(s)	594, 1395, 1438
BshNI	GGYRCC	2 cut(s)	1478, 1672
BshTI	ACCGGT	1 cut(s)	157
BsiEI	CGRYCG	3 cut(s)	285, 560, 780
BsiHKCI	CYCGRG	2 cut(s)	630, 1281
BslFI	GGGAC	1 cut(s)	670
BslI	CCNNNNNNNGG	2 cut(s)	431, 1434
BsmAI	GTCTC	3 cut(s)	767, 1200, 1581
BsmBI	CGTCTC	2 cut(s)	767, 1581
BsmFI	GGGAC	1 cut(s)	670
BsmI	GAATGC	1 cut(s)	1183
BsnI	GGCC	3 cut(s)	594, 1395, 1438
Bso31I	GGTCTC	1 cut(s)	1200
BsoBI	CYCGRG	2 cut(s)	630, 1281
Bsp1286I	GDGCHC	1 cut(s)	1244
Bsp19I	CCATGG	1 cut(s)	1687
Bsp68I	TCGCGA	1 cut(s)	983
BspANI	GGCC	3 cut(s)	594, 1395, 1438
BspCNI	CTCAG	2 cut(s)	858, 909
BspFNI	CGCG	5 cut(s)	548, 842, 983, 1628, 1649
BspHI	TCATGA	1 cut(s)	973
BspLI	GGNNCC	3 cut(s)	150, 1480, 1674
BspMI	ACCTGC	1 cut(s)	696
BspOI	GCTAGC	1 cut(s)	209
BspPI	GGATC	5 cut(s)	647, 1020, 1122, 1294, 1424
BspT107I	GGYRCC	2 cut(s)	1478, 1672
BspTNI	GGTCTC	1 cut(s)	1200
BsrDI	GCAATG	1 cut(s)	1452
BsrFI	RCCGGY	5 cut(s)	157, 510, 528, 683, 1509
BsrI	ACTGG	2 cut(s)	1211, 1405
BssAI	RCCGGY	5 cut(s)	157, 510, 528, 683, 1509
BssECI	CCNNGG	3 cut(s)	1281, 1433, 1687
BssT1I	CCWWGG	2 cut(s)	1433, 1687
Bst2UI	CCWGG	1 cut(s)	494
Bst4CI	ACNGT	9 cut(s)	347, 404, 452, 758, 786, 1334, 1382, 1483, 1527
Bst6I	CTCTTC	6 cut(s)	18, 626, 817, 1182, 1194, 1587
BstBAI	YACGTR	4 cut(s)	662, 918, 935, 1390
BstC8I	GCNNGC	4 cut(s)	207, 269, 584, 1661
BstDEI	CTNAG	3 cut(s)	831, 866, 896
BstDSI	CCRYGG	1 cut(s)	1687
BstEII	GGTNACC	1 cut(s)	1056
BstF5I	GGATG	2 cut(s)	393, 826
BstFNI	CGCG	5 cut(s)	548, 842, 983, 1628, 1649
BstHHI	GCGC	3 cut(s)	550, 826, 1659
BstMAI	GTCTC	3 cut(s)	767, 1200, 1581
BstMCI	CGRYCG	3 cut(s)	285, 560, 780
BstMWI	GCNNNNNNNGC	2 cut(s)	614, 1401
BstNI	CCWGG	1 cut(s)	494
BstNSI	RCATGY	1 cut(s)	1315
BstPI	GGTNACC	1 cut(s)	1056
BstSCI	CCNGG	5 cut(s)	288, 492, 1121, 1280, 1281
BstUI	CGCG	5 cut(s)	548, 842, 983, 1628, 1649
BstV1I	GCAGC	1 cut(s)	494
BstV2I	GAAGAC	2 cut(s)	44, 1563
BstX2I	RGATCY	4 cut(s)	766, 853, 1114, 1299
BstYI	RGATCY	4 cut(s)	766, 853, 1114, 1299
Bsu36I	CCTNAGG	1 cut(s)	831
BsuI	GTATCC	1 cut(s)	189
BsuRI	GGCC	3 cut(s)	594, 1395, 1438
BtgI	CCRYGG	1 cut(s)	1687
BtrI	CACGTC	1 cut(s)	940
BtsCI	GGATG	2 cut(s)	393, 826
BtsI	GCAGTG	1 cut(s)	1453
BtsIMutI	CAGTG	3 cut(s)	822, 863, 1453
BtuMI	TCGCGA	1 cut(s)	983
BveI	ACCTGC	1 cut(s)	696
Cac8I	GCNNGC	4 cut(s)	207, 269, 584, 1661
CaiI	CAGNNNCTG	1 cut(s)	1117
CciI	TCATGA	1 cut(s)	973
CfoI	GCGC	3 cut(s)	550, 826, 1659
Cfr10I	RCCGGY	5 cut(s)	157, 510, 528, 683, 1509
Cfr13I	GGNCC	3 cut(s)	1393, 1437, 1502
Cfr9I	CCCGGG	1 cut(s)	1281
CpoI	CGGWCCG	1 cut(s)	1502
CseI	GACGC	2 cut(s)	848, 1634
CsiI	ACCWGGT	1 cut(s)	492
Csp6I	GTAC	5 cut(s)	514, 1148, 1317, 1535, 1673
CspAI	ACCGGT	1 cut(s)	157
CspCI	CAANNNNNGTGG	2 cut(s)	1429, 1464
CspI	CGGWCCG	1 cut(s)	1502
CviAII	CATG	6 cut(s)	667, 718, 974, 1233, 1312, 1688
CviQI	GTAC	5 cut(s)	514, 1148, 1317, 1535, 1673
DdeI	CTNAG	3 cut(s)	831, 866, 896
EaeI	YGGCCR	1 cut(s)	592
Eam1104I	CTCTTC	6 cut(s)	18, 626, 817, 1182, 1194, 1587
EarI	CTCTTC	6 cut(s)	18, 626, 817, 1182, 1194, 1587
EciI	GGCGGA	1 cut(s)	411
Eco130I	CCWWGG	2 cut(s)	1433, 1687
Eco24I	GRGCYC	1 cut(s)	1244
Eco31I	GGTCTC	1 cut(s)	1200
Eco47I	GGWCC	1 cut(s)	1502
Eco57I	CTGAAG	2 cut(s)	182, 798
Eco72I	CACGTG	3 cut(s)	662, 918, 935
Eco81I	CCTNAGG	1 cut(s)	831
Eco88I	CYCGRG	2 cut(s)	630, 1281
Eco91I	GGTNACC	1 cut(s)	1056
EcoO65I	GGTNACC	1 cut(s)	1056
EcoRI	GAATTC	1 cut(s)	96
EcoRII	CCWGG	1 cut(s)	492
EcoT14I	CCWWGG	2 cut(s)	1433, 1687
EcoT38I	GRGCYC	1 cut(s)	1244
ErhI	CCWWGG	2 cut(s)	1433, 1687
Esp3I	CGTCTC	2 cut(s)	767, 1581
FaeI	CATG	6 cut(s)	670, 721, 977, 1236, 1315, 1691
FalI	AAGNNNNNCTT	4 cut(s)	717, 749, 753, 785
FaqI	GGGAC	1 cut(s)	670
FatI	CATG	6 cut(s)	666, 717, 973, 1232, 1311, 1687
FauI	CCCGC	4 cut(s)	276, 914, 1046, 1360
FblI	GTMKAC	1 cut(s)	1623
Fnu4HI	GCNGC	3 cut(s)	210, 508, 1650
FokI	GGATG	2 cut(s)	380, 813
FriOI	GRGCYC	1 cut(s)	1244
Fsp4HI	GCNGC	3 cut(s)	210, 508, 1650
FspBI	CTAG	3 cut(s)	206, 605, 647
GlaI	GCGC	3 cut(s)	549, 825, 1658
GluI	GCNGC	3 cut(s)	210, 508, 1650
GsaI	CCCAGC	1 cut(s)	639
HaeIII	GGCC	3 cut(s)	594, 1395, 1438
HgaI	GACGC	2 cut(s)	848, 1634
HhaI	GCGC	3 cut(s)	550, 826, 1659
Hin1II	CATG	6 cut(s)	670, 721, 977, 1236, 1315, 1691
Hin6I	GCGC	3 cut(s)	548, 824, 1657
HinP1I	GCGC	3 cut(s)	548, 824, 1657
HincII	GTYRAC	1 cut(s)	1624
HindII	GTYRAC	1 cut(s)	1624
HphI	GGTGA	3 cut(s)	147, 464, 1050
Hpy166II	GTNNAC	6 cut(s)	391, 516, 652, 838, 1414, 1624
Hpy188III	TCNNGA	9 cut(s)	90, 115, 131, 539, 770, 974, 982, 1269, 1699
Hpy8I	GTNNAC	6 cut(s)	391, 516, 652, 838, 1414, 1624
Hpy99I	CGWCG	6 cut(s)	37, 96, 758, 1223, 1628, 1633
HpyAV	CCTTC	5 cut(s)	203, 381, 1453, 1541, 1711
HpyCH4III	ACNGT	9 cut(s)	347, 404, 452, 758, 786, 1334, 1382, 1483, 1527
HpyCH4IV	ACGT	9 cut(s)	176, 661, 876, 917, 934, 939, 1071, 1389, 1694
HpyCH4V	TGCA	4 cut(s)	4, 80, 407, 1446
HpyF10VI	GCNNNNNNNGC	2 cut(s)	614, 1401
HpyF3I	CTNAG	3 cut(s)	831, 866, 896
HpySE526I	ACGT	9 cut(s)	176, 661, 876, 917, 934, 939, 1071, 1389, 1694
Hsp92II	CATG	6 cut(s)	670, 721, 977, 1236, 1315, 1691
HspAI	GCGC	3 cut(s)	548, 824, 1657
KpnI	GGTACC	1 cut(s)	1676
LmnI	GCTCC	3 cut(s)	256, 322, 957
Lsp1109I	GCAGC	1 cut(s)	494
LweI	GCATC	2 cut(s)	207, 835
MabI	ACCWGGT	1 cut(s)	492
MaeI	CTAG	3 cut(s)	206, 605, 647
MaeII	ACGT	9 cut(s)	176, 661, 876, 917, 934, 939, 1071, 1389, 1694
MflI	RGATCY	4 cut(s)	766, 853, 1114, 1299
MhlI	GDGCHC	1 cut(s)	1244
MluCI	AATT	9 cut(s)	96, 299, 908, 994, 1031, 1135, 1289, 1357, 1495
MlyI	GAGTC	4 cut(s)	242, 606, 803, 1613
MmeI	TCCRAC	3 cut(s)	56, 1107, 1587
MnlI	CCTC	6 cut(s)	57, 247, 900, 1195, 1534, 1662
MroXI	GAANNNNTTC	1 cut(s)	1044
MspA1I	CMGCKG	1 cut(s)	507
MspR9I	CCNGG	5 cut(s)	290, 494, 1123, 1282, 1283
Mva1269I	GAATGC	1 cut(s)	1183
MvaI	CCWGG	1 cut(s)	494
MvnI	CGCG	5 cut(s)	548, 842, 983, 1628, 1649
MwoI	GCNNNNNNNGC	2 cut(s)	614, 1401
NciI	CCSGG	4 cut(s)	290, 1123, 1282, 1283
NcoI	CCATGG	1 cut(s)	1687
NheI	GCTAGC	1 cut(s)	205
NlaIII	CATG	6 cut(s)	670, 721, 977, 1236, 1315, 1691
NlaIV	GGNNCC	3 cut(s)	150, 1480, 1674
NmuCI	GTSAC	5 cut(s)	153, 452, 935, 1056, 1370
NruI	TCGCGA	1 cut(s)	983
NspI	RCATGY	1 cut(s)	1315
PaeR7I	CTCGAG	1 cut(s)	630
PagI	TCATGA	1 cut(s)	973
PcsI	WCGNNNNNNNCGW	1 cut(s)	987
PctI	GAATGC	1 cut(s)	1183
PdmI	GAANNNNTTC	1 cut(s)	1044
PfeI	GAWTC	9 cut(s)	262, 367, 463, 792, 970, 1045, 1265, 1325, 1708
PflFI	GACNNNGTC	1 cut(s)	1123
PinAI	ACCGGT	1 cut(s)	157
PkrI	GCNGC	3 cut(s)	211, 509, 1651
Ple19I	CGATCG	2 cut(s)	560, 780
PleI	GAGTC	4 cut(s)	241, 606, 803, 1612
PmaCI	CACGTG	3 cut(s)	662, 918, 935
PmlI	CACGTG	3 cut(s)	662, 918, 935
PpsI	GAGTC	4 cut(s)	241, 606, 803, 1612
Ppu21I	YACGTR	4 cut(s)	662, 918, 935, 1390
Psp1406I	AACGTT	2 cut(s)	876, 1694
Psp6I	CCWGG	1 cut(s)	492
PspCI	CACGTG	3 cut(s)	662, 918, 935
PspEI	GGTNACC	1 cut(s)	1056
PspFI	CCCAGC	1 cut(s)	635
PspGI	CCWGG	1 cut(s)	492
PspN4I	GGNNCC	3 cut(s)	150, 1480, 1674
PspPI	GGNCC	3 cut(s)	1393, 1437, 1502
PspXI	VCTCGAGB	1 cut(s)	630
PstNI	CAGNNNCTG	1 cut(s)	1117
PsuI	RGATCY	4 cut(s)	766, 853, 1114, 1299
PsyI	GACNNNGTC	1 cut(s)	1123
PvuI	CGATCG	2 cut(s)	560, 780
PvuII	CAGCTG	1 cut(s)	507
RruI	TCGCGA	1 cut(s)	983
RsaI	GTAC	5 cut(s)	515, 1149, 1318, 1536, 1674
RsaNI	GTAC	5 cut(s)	514, 1148, 1317, 1535, 1673
Rsr2I	CGGWCCG	1 cut(s)	1502
RsrII	CGGWCCG	1 cut(s)	1502
SalI	GTCGAC	1 cut(s)	1622
SatI	GCNGC	3 cut(s)	210, 508, 1650
Sau96I	GGNCC	3 cut(s)	1393, 1437, 1502
SchI	GAGTC	4 cut(s)	242, 606, 803, 1613
ScrFI	CCNGG	5 cut(s)	290, 494, 1123, 1282, 1283
SduI	GDGCHC	1 cut(s)	1244
SexAI	ACCWGGT	1 cut(s)	492
SfaNI	GCATC	2 cut(s)	207, 835
Sfr274I	CTCGAG	1 cut(s)	630
SgrAI	CRCCGGYG	1 cut(s)	683
SinI	GGWCC	1 cut(s)	1502
SlaI	CTCGAG	1 cut(s)	630
SmaI	CCCGGG	1 cut(s)	1283
SmlI	CTYRAG	2 cut(s)	630, 770
SmoI	CTYRAG	2 cut(s)	630, 770
Sse9I	AATT	9 cut(s)	96, 299, 908, 994, 1031, 1135, 1289, 1357, 1495
SspI	AATATT	1 cut(s)	85
SspMI	CTAG	3 cut(s)	206, 605, 647
StyD4I	CCNGG	5 cut(s)	288, 492, 1121, 1280, 1281
StyI	CCWWGG	2 cut(s)	1433, 1687
TaaI	ACNGT	9 cut(s)	347, 404, 452, 758, 786, 1334, 1382, 1483, 1527
TaiI	ACGT	9 cut(s)	179, 664, 879, 920, 937, 942, 1074, 1392, 1697
TaqI	TCGA	8 cut(s)	91, 222, 610, 631, 753, 795, 1328, 1623
TaqII	GACCGA	3 cut(s)	299, 632, 1519
TasI	AATT	9 cut(s)	96, 299, 908, 994, 1031, 1135, 1289, 1357, 1495
TauI	GCSGC	2 cut(s)	212, 1652
TfiI	GAWTC	9 cut(s)	262, 367, 463, 792, 970, 1045, 1265, 1325, 1708
TscAI	CASTG	3 cut(s)	822, 870, 1453
TseFI	GTSAC	5 cut(s)	153, 452, 935, 1056, 1370
TseI	GCWGC	1 cut(s)	507
Tsp45I	GTSAC	5 cut(s)	153, 452, 935, 1056, 1370
TspDTI	ATGAA	3 cut(s)	342, 962, 1652
TspGWI	ACGGA	5 cut(s)	141, 386, 471, 1515, 1646
TspMI	CCCGGG	1 cut(s)	1281
TspRI	CASTG	3 cut(s)	822, 870, 1453
Tth111I	GACNNNGTC	1 cut(s)	1123
VpaK11BI	GGWCC	1 cut(s)	1502
XapI	RAATTY	4 cut(s)	96, 908, 994, 1357
XceI	RCATGY	1 cut(s)	1315
XhoI	CTCGAG	1 cut(s)	630
XmaI	CCCGGG	1 cut(s)	1281
XmiI	GTMKAC	1 cut(s)	1623
XmnI	GAANNNNTTC	1 cut(s)	1044
XspI	CTAG	3 cut(s)	206, 605, 647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.