Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0016517

Physical Location & Seq

Genomic Coordinates Reverse (-)

4332353 .. 4334170

Gene Structure 1818 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G061300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGCATGCCTCTTTGCACTTCACCACCACCAACACTCCACCATCCTCTTCCACACTTCCCAAAAATCCCATTCAAATTACTCGCTCGCCCACAACACAGATCACATGCAAAATCCTCATCAACCCATCCAAGAAAACCCTACACCAGAAAACCCAAAAACCTCTATGGCCAACCTTGCCACCTCCGAACACTAAACCATTGTTACCACAAGTGAACCCTATCAAACCCAATATTTACCAATCTCGCCTCAACCCACTTCAAAAATTAGCAGCCTCACTCCTGAACACAATAGAAACCTCACTGATAGAGCCACTAGAAAAGAAGCAAAGTTTGCCCAAAACCATTGACCCGGCGGTCCAAATATCCGGTAATTTCTCACCGGTTCAGGAGTGTCCAGTTCAGTACGGTTTAGAGGTAGTGGGTCAAATCCCAGATTGTCTACGTGGCGTTTATGTCCGAAACGGCGCCAATCCAATGTTTGAGCCGGCAGGCGGACACCACTTGTTTGATGGGGACGGTATGATCCACGCGCTCACTCTAGGCTCAGCTAACCGAGCCAGCTACAGCTGTAGGTACACCCGCACCAGCCGGCTCGAGCAAGAAGCCAAGATGGGCCGGTCTATATTCCCGAAGCCGATTGGTGAGCTTCATGGTCACTCAGGACTGGCTCGGCTCTTCTTGTTCATGGCTCGAGCCGCAGTCGGCTTGGTTGACTGCTCTCGTGGGACTGGCGTGGCTAATGCTGGCTTGGTTTATTTTAACGGACGATTATTAGCCATGTCCGAAGATGATCTTCCGTACAGTGTGAAAGTCAAGGGTGATGGTGATCTTGAAACAATTGGACGGTTCGATTTTAAAGGTGGGCTGGACCGGCCCATGATTGCTCATCCCAAGGTGGACGCCGTAACGGGTGAGCTCCACGTGCTGAGCTACGACGTGGTGAAGAAACCGTACCTCAAGTACTTCAAGTTTGGCGCGAGCGGGACAAAGTCACGTGACGTGGACATCACGCTAGACCAACCAACCATGGTGCATGATTTTGCTATAACCCAGAACTATGTGGTGATCCCGGATCAGCAAGTGGTATTCAAATTATCCGAAATGATCAAAGGCGGGTCGCCGGTCATCTACGACCCGAACAAGACGTCTCGGTTTGGAATTTTGCCTAAAAACGATGTGGATGAATCGGGGATTCAGTGGATTGACGTGCCGAATTGCTTTTGTTTCCATTTGTGTAATGCATGGGAGGAAACTTCGGAAGTGGGTGACCCGATTATTGTTGTGATCGGGTCGTGCATGGACCCACCTGATTCGGTGTTTAAAGAGCACGAAAACAACCCAATTCGGGCTGAATTGACCGAAATGAGAATGAATTTGAGGACTCAAGAATCAAGCCGCCGTGTCTTGGTCCCGGGTTTGAATTTGGAAGTGGGGCAAGTGAATAAAGAGGTGGTAGGGCGAAAGAGCAAGTATGTGTACATGGCTATAACGGAGCCGTGGCCCAAGTGTTCGGGCATTGCTAAGGTGGATTTGGAGACTGGTTCGGTGACCAAGCATTTGTATGGGACCGGCCGGTTTGGAGGTGAACCCTTTTACGTGCCGAAACGGAAAAATGATAGCATGGGAAACCATGTTGAAGAAGATGATGATGGGTTTATAATGGGTTTTGTGAGGGACGAGGTTGATGAGAGCTCGGAGCTAGTGATATTGAAAGCTTCAAGCATGAAGCAAGTGGGGTTGGTGAGATTGCCCGCTAGGGTTCCATATGGATTCCACGGTACATTTATTAGTGAACAAGATTTGAAGGAACAGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009639 GO:0009687 GO:0009688 GO:0009987 GO:0010114 GO:0010436 GO:0016020 GO:0016053 GO:0016106 GO:0016114 GO:0016491 GO:0016701 GO:0016702 GO:0019752 GO:0031976 GO:0031984 GO:0032787 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043289 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045549 GO:0046165 GO:0046394 GO:0050896 GO:0051213 GO:0055035 GO:0055114 GO:0071704 GO:0072330 GO:1901576 GO:1901615 GO:1901617 GO:1902644 GO:1902645

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

RPE65

Protein Analysis

606

Amino Acids

66.94

Weight (kDa)

7.24

Isoelectric Point (pI)

38.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016517)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24220
fragaria_vesca	FvH4_4g05900
malus_domestica	MD16G1235500.v1.1
prunus_persica	Prupe.1G061300_v2.0.a1
pyrus_communis	pycom16g19710
rosa_chinensis	RchiOBHm_Chr4g0397001
rosa_laevigata	RLG00000009460
rosa_multiflora	Rmu_sc0002963.1_g000015
rosa_roxburghii	Rroxscaffold_5G00341990
rosa_rugosa	Rorug03G0345900
rosa_samantha	Rh4BG072400 Rh4CG080700 Rh4DG069800
rosa_wichuraiana	Rw4G006100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1658
AasI	GACNNNNNNGTC	1 cut(s)	353
AatII	GACGTC	1 cut(s)	1148
AccB1I	GGYRCC	1 cut(s)	464
AccBSI	CCGCTC	1 cut(s)	981
AccI	GTMKAC	1 cut(s)	439
AccII	CGCG	2 cut(s)	530, 977
AciI	CCGC	8 cut(s)	353, 492, 580, 696, 981, 1113, 1396, 1752
AclWI	GGATC	3 cut(s)	517, 1060, 1080
AcoI	YGGCCR	2 cut(s)	167, 1570
AcsI	RAATTY	3 cut(s)	1158, 1372, 1420
AcvI	CACGTG	2 cut(s)	922, 995
AcyI	GRCGYC	3 cut(s)	465, 900, 1145
AfaI	GTAC	7 cut(s)	404, 575, 800, 953, 962, 1478, 1780
AfiI	CCNNNNNNNGG	3 cut(s)	491, 1345, 1405
AgeI	ACCGGT	1 cut(s)	379
AjiI	CACGTC	3 cut(s)	937, 1000, 1207
AluBI	AGCT	9 cut(s)	548, 561, 567, 646, 916, 930, 1692, 1699, 1715
AluI	AGCT	9 cut(s)	548, 561, 567, 646, 916, 930, 1692, 1699, 1715
Alw21I	GWGCWC	3 cut(s)	918, 1329, 1694
Alw26I	GTCTC	2 cut(s)	1152, 1529
AlwI	GGATC	3 cut(s)	517, 1060, 1080
Ama87I	CYCGRG	3 cut(s)	593, 690, 1411
AoxI	GGCC	5 cut(s)	167, 613, 872, 1499, 1570
ApeKI	GCWGC	1 cut(s)	269
ApoI	RAATTY	3 cut(s)	1158, 1372, 1420
ArsI	GACNNNNNNTTYG	4 cut(s)	1130, 1162, 1540, 1572
AsiGI	ACCGGT	1 cut(s)	379
AspLEI	GCGC	3 cut(s)	467, 532, 977
AspS9I	GGNCC	8 cut(s)	355, 613, 868, 873, 1300, 1408, 1500, 1566
AsuC2I	CCSGG	4 cut(s)	350, 1070, 1412, 1413
AvaI	CYCGRG	3 cut(s)	593, 690, 1411
AvaII	GGWCC	5 cut(s)	355, 868, 1300, 1408, 1566
BalI	TGGCCA	1 cut(s)	169
BanI	GGYRCC	1 cut(s)	464
BanII	GRGCYC	2 cut(s)	918, 1694
BarI	GAAGNNNNNNTAC	2 cut(s)	935, 967
BauI	CACGAG	1 cut(s)	720
BbrPI	CACGTG	2 cut(s)	922, 995
Bbv12I	GWGCWC	3 cut(s)	918, 1329, 1694
BbvI	GCAGC	1 cut(s)	281
BccI	CCATC	6 cut(s)	49, 133, 503, 604, 815, 1643
BceAI	ACGGC	4 cut(s)	478, 887, 1383, 1480
BclI	TGATCA	1 cut(s)	1104
BcnI	CCSGG	4 cut(s)	350, 1070, 1412, 1413
BcoDI	GTCTC	2 cut(s)	1152, 1529
BfaI	CTAG	5 cut(s)	314, 539, 1013, 1700, 1755
BfmI	CTRYAG	2 cut(s)	562, 568
BfoI	RGCGCY	1 cut(s)	468
BisI	GCNGC	3 cut(s)	270, 696, 1396
BlpI	GCTNAGC	2 cut(s)	544, 926
BlsI	GCNGC	3 cut(s)	271, 697, 1397
BmcAI	AGTACT	1 cut(s)	962
Bme1390I	CCNGG	4 cut(s)	350, 1070, 1412, 1413
Bme18I	GGWCC	5 cut(s)	355, 868, 1300, 1408, 1566
BmeT110I	CYCGRG	3 cut(s)	593, 690, 1411
BmgBI	CACGTC	3 cut(s)	937, 1000, 1207
BmgT120I	GGNCC	8 cut(s)	355, 613, 868, 873, 1300, 1408, 1500, 1566
BmiI	GGNNCC	6 cut(s)	466, 1302, 1410, 1494, 1567, 1761
BmrFI	CCNGG	4 cut(s)	350, 1070, 1412, 1413
Bpu10I	CCTNAGC	1 cut(s)	1521
Bpu1102I	GCTNAGC	2 cut(s)	544, 926
BpuEI	CTTGAG	2 cut(s)	941, 1368
BpuMI	CCSGG	4 cut(s)	350, 1070, 1412, 1413
BsaAI	YACGTR	4 cut(s)	443, 922, 995, 1597
BsaBI	GATNNNNATC	1 cut(s)	825
BsaHI	GRCGYC	3 cut(s)	465, 900, 1145
BsaJI	CCNNGG	5 cut(s)	891, 1026, 1411, 1496, 1774
BsaWI	WCCGGW	2 cut(s)	365, 379
BsaXI	ACNNNNNCTCC	2 cut(s)	19, 49
Bsc4I	CCNNNNNNNGG	3 cut(s)	491, 1345, 1405
Bse118I	RCCGGY	8 cut(s)	379, 484, 588, 615, 870, 1120, 1568, 1572
Bse1I	ACTGG	4 cut(s)	395, 669, 733, 1543
Bse3DI	GCAATG	1 cut(s)	1515
Bse8I	GATNNNNATC	1 cut(s)	825
BseDI	CCNNGG	5 cut(s)	891, 1026, 1411, 1496, 1774
BseGI	GGATG	4 cut(s)	41, 125, 886, 1186
BseJI	GATNNNNATC	1 cut(s)	825
BseLI	CCNNNNNNNGG	3 cut(s)	491, 1345, 1405
BseMI	GCAATG	1 cut(s)	1515
BseMII	CTCAG	3 cut(s)	558, 672, 917
BseNI	ACTGG	4 cut(s)	395, 669, 733, 1543
BseX3I	CGGCCG	1 cut(s)	1570
BseXI	GCAGC	1 cut(s)	281
Bsh1236I	CGCG	2 cut(s)	530, 977
Bsh1285I	CGRYCG	1 cut(s)	1573
BshFI	GGCC	5 cut(s)	169, 615, 874, 1501, 1572
BshNI	GGYRCC	1 cut(s)	464
BshTI	ACCGGT	1 cut(s)	379
BsiEI	CGRYCG	1 cut(s)	1573
BsiHKAI	GWGCWC	3 cut(s)	918, 1329, 1694
BsiHKCI	CYCGRG	3 cut(s)	593, 690, 1411
BslFI	GGGAC	6 cut(s)	527, 739, 997, 1394, 1579, 1688
BslI	CCNNNNNNNGG	3 cut(s)	491, 1345, 1405
BsmAI	GTCTC	2 cut(s)	1152, 1529
BsmBI	CGTCTC	1 cut(s)	1152
BsmFI	GGGAC	6 cut(s)	527, 739, 997, 1394, 1579, 1688
BsnI	GGCC	5 cut(s)	169, 615, 874, 1501, 1572
BsoBI	CYCGRG	3 cut(s)	593, 690, 1411
Bsp1286I	GDGCHC	3 cut(s)	918, 1329, 1694
Bsp1407I	TGTACA	1 cut(s)	1476
Bsp143I	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
Bsp1720I	GCTNAGC	2 cut(s)	544, 926
Bsp19I	CCATGG	1 cut(s)	1026
BspACI	CCGC	8 cut(s)	353, 492, 580, 696, 981, 1113, 1396, 1752
BspANI	GGCC	5 cut(s)	169, 615, 874, 1501, 1572
BspCNI	CTCAG	3 cut(s)	557, 671, 918
BspFNI	CGCG	2 cut(s)	530, 977
BspLI	GGNNCC	6 cut(s)	466, 1302, 1410, 1494, 1567, 1761
BspPI	GGATC	3 cut(s)	517, 1060, 1080
BspQI	GCTCTTC	1 cut(s)	680
BspT107I	GGYRCC	1 cut(s)	464
BsrBI	CCGCTC	1 cut(s)	981
BsrDI	GCAATG	1 cut(s)	1515
BsrFI	RCCGGY	8 cut(s)	379, 484, 588, 615, 870, 1120, 1568, 1572
BsrGI	TGTACA	1 cut(s)	1476
BsrI	ACTGG	4 cut(s)	395, 669, 733, 1543
BssAI	RCCGGY	8 cut(s)	379, 484, 588, 615, 870, 1120, 1568, 1572
BssECI	CCNNGG	5 cut(s)	891, 1026, 1411, 1496, 1774
BssMI	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
BssNI	GRCGYC	3 cut(s)	465, 900, 1145
BssSI	CACGAG	1 cut(s)	720
BssT1I	CCWWGG	2 cut(s)	891, 1026
Bst2BI	CACGAG	1 cut(s)	720
Bst4CI	ACNGT	6 cut(s)	407, 518, 803, 846, 951, 1778
Bst6I	CTCTTC	2 cut(s)	52, 680
BstACI	GRCGYC	3 cut(s)	465, 900, 1145
BstAPI	GCANNNNNTGC	1 cut(s)	331
BstAUI	TGTACA	1 cut(s)	1476
BstBAI	YACGTR	4 cut(s)	443, 922, 995, 1597
BstC8I	GCNNGC	9 cut(s)	6, 86, 486, 490, 559, 590, 745, 979, 1752
BstDEI	CTNAG	4 cut(s)	544, 658, 926, 1521
BstDSI	CCRYGG	3 cut(s)	1026, 1496, 1774
BstEII	GGTNACC	2 cut(s)	1265, 1546
BstF5I	GGATG	4 cut(s)	41, 125, 886, 1186
BstFNI	CGCG	2 cut(s)	530, 977
BstH2I	RGCGCY	1 cut(s)	468
BstHHI	GCGC	3 cut(s)	467, 532, 977
BstKTI	GATC	8 cut(s)	102, 525, 793, 829, 1068, 1075, 1107, 1287
BstMAI	GTCTC	2 cut(s)	1152, 1529
BstMBI	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
BstMCI	CGRYCG	1 cut(s)	1573
BstMWI	GCNNNNNNNGC	6 cut(s)	175, 331, 554, 695, 871, 922
BstNSI	RCATGY	2 cut(s)	8, 108
BstPI	GGTNACC	2 cut(s)	1265, 1546
BstSCI	CCNGG	4 cut(s)	348, 1068, 1410, 1411
BstSFI	CTRYAG	2 cut(s)	562, 568
BstUI	CGCG	2 cut(s)	530, 977
BstV1I	GCAGC	1 cut(s)	281
BstZI	CGGCCG	1 cut(s)	1570
BsuRI	GGCC	5 cut(s)	169, 615, 874, 1501, 1572
BtgI	CCRYGG	3 cut(s)	1026, 1496, 1774
BtrI	CACGTC	3 cut(s)	937, 1000, 1207
BtsCI	GGATG	4 cut(s)	41, 125, 886, 1186
BtsIMutI	CAGTG	3 cut(s)	299, 808, 1202
Cac8I	GCNNGC	9 cut(s)	6, 86, 486, 490, 559, 590, 745, 979, 1752
CfoI	GCGC	3 cut(s)	467, 532, 977
Cfr10I	RCCGGY	8 cut(s)	379, 484, 588, 615, 870, 1120, 1568, 1572
Cfr13I	GGNCC	8 cut(s)	355, 613, 868, 873, 1300, 1408, 1500, 1566
Cfr9I	CCCGGG	1 cut(s)	1411
CseI	GACGC	1 cut(s)	908
Csp6I	GTAC	7 cut(s)	403, 574, 799, 952, 961, 1477, 1779
CspAI	ACCGGT	1 cut(s)	379
CviQI	GTAC	7 cut(s)	403, 574, 799, 952, 961, 1477, 1779
DdeI	CTNAG	4 cut(s)	544, 658, 926, 1521
DinI	GGCGCC	1 cut(s)	466
DpnI	GATC	8 cut(s)	101, 524, 792, 828, 1067, 1074, 1106, 1286
DpnII	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
DraI	TTTAAA	2 cut(s)	856, 1321
DrdI	GACNNNNNNGTC	1 cut(s)	353
DseDI	GACNNNNNNGTC	1 cut(s)	353
EaeI	YGGCCR	2 cut(s)	167, 1570
EagI	CGGCCG	1 cut(s)	1570
Eam1104I	CTCTTC	2 cut(s)	52, 680
EarI	CTCTTC	2 cut(s)	52, 680
EciI	GGCGGA	1 cut(s)	507
Ecl136II	GAGCTC	2 cut(s)	916, 1692
EclXI	CGGCCG	1 cut(s)	1570
Eco130I	CCWWGG	2 cut(s)	891, 1026
Eco24I	GRGCYC	2 cut(s)	918, 1694
Eco47I	GGWCC	5 cut(s)	355, 868, 1300, 1408, 1566
Eco52I	CGGCCG	1 cut(s)	1570
Eco53kI	GAGCTC	2 cut(s)	916, 1692
Eco72I	CACGTG	2 cut(s)	922, 995
Eco88I	CYCGRG	3 cut(s)	593, 690, 1411
Eco91I	GGTNACC	2 cut(s)	1265, 1546
EcoICRI	GAGCTC	2 cut(s)	916, 1692
EcoO65I	GGTNACC	2 cut(s)	1265, 1546
EcoT14I	CCWWGG	2 cut(s)	891, 1026
EcoT22I	ATGCAT	2 cut(s)	6, 1243
EcoT38I	GRGCYC	2 cut(s)	918, 1694
EgeI	GGCGCC	1 cut(s)	466
EheI	GGCGCC	1 cut(s)	466
ErhI	CCWWGG	2 cut(s)	891, 1026
Esp3I	CGTCTC	1 cut(s)	1152
FalI	AAGNNNNNCTT	2 cut(s)	777, 809
FaqI	GGGAC	6 cut(s)	527, 739, 997, 1394, 1579, 1688
FauI	CCCGC	4 cut(s)	587, 974, 1106, 1759
FauNDI	CATATG	1 cut(s)	1765
FbaI	TGATCA	1 cut(s)	1104
FblI	GTMKAC	1 cut(s)	439
Fnu4HI	GCNGC	3 cut(s)	270, 696, 1396
FokI	GGATG	4 cut(s)	28, 112, 873, 1193
FriOI	GRGCYC	2 cut(s)	918, 1694
Fsp4HI	GCNGC	3 cut(s)	270, 696, 1396
FspBI	CTAG	5 cut(s)	314, 539, 1013, 1700, 1755
GlaI	GCGC	3 cut(s)	466, 531, 976
GluI	GCNGC	3 cut(s)	270, 696, 1396
HaeII	RGCGCY	1 cut(s)	468
HaeIII	GGCC	5 cut(s)	169, 615, 874, 1501, 1572
HgaI	GACGC	1 cut(s)	908
HhaI	GCGC	3 cut(s)	467, 532, 977
Hin1I	GRCGYC	3 cut(s)	465, 900, 1145
Hin6I	GCGC	3 cut(s)	465, 530, 975
HinP1I	GCGC	3 cut(s)	465, 530, 975
HincII	GTYRAC	1 cut(s)	712
HindII	GTYRAC	1 cut(s)	712
HindIII	AAGCTT	1 cut(s)	1713
HinfI	GANTC	6 cut(s)	1184, 1192, 1310, 1381, 1388, 1770
Hpy166II	GTNNAC	9 cut(s)	214, 440, 576, 712, 898, 1003, 1477, 1586, 1793
Hpy188I	TCNGA	6 cut(s)	186, 458, 784, 1099, 1258, 1696
Hpy188III	TCNNGA	6 cut(s)	280, 386, 628, 660, 830, 1385
Hpy8I	GTNNAC	9 cut(s)	214, 440, 576, 712, 898, 1003, 1477, 1586, 1793
Hpy99I	CGWCG	1 cut(s)	938
HpyAV	CCTTC	1 cut(s)	1798
HpyCH4III	ACNGT	6 cut(s)	407, 518, 803, 846, 951, 1778
HpyCH4IV	ACGT	8 cut(s)	442, 921, 936, 994, 999, 1145, 1206, 1596
HpyCH4V	TGCA	6 cut(s)	4, 16, 108, 1033, 1241, 1296
HpyF10VI	GCNNNNNNNGC	6 cut(s)	175, 331, 554, 695, 871, 922
HpyF3I	CTNAG	4 cut(s)	544, 658, 926, 1521
HpySE526I	ACGT	8 cut(s)	442, 921, 936, 994, 999, 1145, 1206, 1596
Hsp92I	GRCGYC	3 cut(s)	465, 900, 1145
HspAI	GCGC	3 cut(s)	465, 530, 975
KasI	GGCGCC	1 cut(s)	464
KroI	GCCGGC	2 cut(s)	484, 588
KroNI	GCCGGC	2 cut(s)	486, 590
Ksp22I	TGATCA	1 cut(s)	1104
Kzo9I	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
LguI	GCTCTTC	1 cut(s)	680
LmnI	GCTCC	3 cut(s)	921, 1492, 1696
Lsp1109I	GCAGC	1 cut(s)	281
MaeI	CTAG	5 cut(s)	314, 539, 1013, 1700, 1755
MaeII	ACGT	8 cut(s)	442, 921, 936, 994, 999, 1145, 1206, 1596
MaeIII	GTNAC	7 cut(s)	201, 653, 904, 990, 995, 1265, 1546
MalI	GATC	8 cut(s)	101, 524, 792, 828, 1067, 1074, 1106, 1286
MbiI	CCGCTC	1 cut(s)	981
MboI	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
MboII	GAAGA	7 cut(s)	39, 667, 785, 797, 955, 1649, 1652
MfeI	CAATTG	1 cut(s)	837
MhlI	GDGCHC	3 cut(s)	918, 1329, 1694
MlsI	TGGCCA	1 cut(s)	169
MluNI	TGGCCA	1 cut(s)	169
Mly113I	GGCGCC	1 cut(s)	465
MlyI	GAGTC	1 cut(s)	1375
Mox20I	TGGCCA	1 cut(s)	169
Mph1103I	ATGCAT	2 cut(s)	6, 1243
MroNI	GCCGGC	2 cut(s)	484, 588
MscI	TGGCCA	1 cut(s)	169
MseI	TTAA	3 cut(s)	759, 855, 1320
MslI	CAYNNNNRTG	1 cut(s)	1560
Msp20I	TGGCCA	1 cut(s)	169
MspA1I	CMGCKG	1 cut(s)	567
MspR9I	CCNGG	4 cut(s)	350, 1070, 1412, 1413
MunI	CAATTG	1 cut(s)	837
MvnI	CGCG	2 cut(s)	530, 977
MwoI	GCNNNNNNNGC	6 cut(s)	175, 331, 554, 695, 871, 922
NaeI	GCCGGC	2 cut(s)	486, 590
NarI	GGCGCC	1 cut(s)	465
NciI	CCSGG	4 cut(s)	350, 1070, 1412, 1413
NcoI	CCATGG	1 cut(s)	1026
NdeI	CATATG	1 cut(s)	1765
NdeII	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
NgoMIV	GCCGGC	2 cut(s)	484, 588
NlaIV	GGNNCC	6 cut(s)	466, 1302, 1410, 1494, 1567, 1761
NmeAIII	GCCGAG	1 cut(s)	649
NmuCI	GTSAC	5 cut(s)	653, 990, 995, 1265, 1546
NsiI	ATGCAT	2 cut(s)	6, 1243
NspI	RCATGY	2 cut(s)	8, 108
PaeI	GCATGC	1 cut(s)	8
PaeR7I	CTCGAG	2 cut(s)	593, 690
PciSI	GCTCTTC	1 cut(s)	680
PdiI	GCCGGC	2 cut(s)	486, 590
PfeI	GAWTC	5 cut(s)	1184, 1192, 1310, 1388, 1770
PflFI	GACNNNGTC	1 cut(s)	988
PfoI	TCCNGGA	1 cut(s)	1068
PinAI	ACCGGT	1 cut(s)	379
PkrI	GCNGC	3 cut(s)	271, 697, 1397
PleI	GAGTC	1 cut(s)	1375
PluTI	GGCGCC	1 cut(s)	468
PmaCI	CACGTG	2 cut(s)	922, 995
PmlI	CACGTG	2 cut(s)	922, 995
PpsI	GAGTC	1 cut(s)	1375
Ppu21I	YACGTR	4 cut(s)	443, 922, 995, 1597
PsiI	TTATAA	1 cut(s)	1658
Psp124BI	GAGCTC	2 cut(s)	918, 1694
PspCI	CACGTG	2 cut(s)	922, 995
PspEI	GGTNACC	2 cut(s)	1265, 1546
PspN4I	GGNNCC	6 cut(s)	466, 1302, 1410, 1494, 1567, 1761
PspPI	GGNCC	8 cut(s)	355, 613, 868, 873, 1300, 1408, 1500, 1566
PspXI	VCTCGAGB	2 cut(s)	593, 690
PsyI	GACNNNGTC	1 cut(s)	988
PvuII	CAGCTG	1 cut(s)	567
RsaI	GTAC	7 cut(s)	404, 575, 800, 953, 962, 1478, 1780
RsaNI	GTAC	7 cut(s)	403, 574, 799, 952, 961, 1477, 1779
RseI	CAYNNNNRTG	1 cut(s)	1560
SacI	GAGCTC	2 cut(s)	918, 1694
SapI	GCTCTTC	1 cut(s)	680
SaqAI	TTAA	3 cut(s)	759, 855, 1320
SatI	GCNGC	3 cut(s)	270, 696, 1396
Sau3AI	GATC	8 cut(s)	99, 522, 790, 826, 1065, 1072, 1104, 1284
Sau96I	GGNCC	8 cut(s)	355, 613, 868, 873, 1300, 1408, 1500, 1566
ScaI	AGTACT	1 cut(s)	962
SchI	GAGTC	1 cut(s)	1375
ScrFI	CCNGG	4 cut(s)	350, 1070, 1412, 1413
SduI	GDGCHC	3 cut(s)	918, 1329, 1694
SfcI	CTRYAG	2 cut(s)	562, 568
SfoI	GGCGCC	1 cut(s)	466
Sfr274I	CTCGAG	2 cut(s)	593, 690
SinI	GGWCC	5 cut(s)	355, 868, 1300, 1408, 1566
SlaI	CTCGAG	2 cut(s)	593, 690
SmaI	CCCGGG	1 cut(s)	1413
SmiMI	CAYNNNNRTG	1 cut(s)	1560
SmlI	CTYRAG	4 cut(s)	593, 690, 956, 1383
SmoI	CTYRAG	4 cut(s)	593, 690, 956, 1383
SphI	GCATGC	1 cut(s)	8
SsiI	CCGC	8 cut(s)	353, 492, 580, 696, 981, 1113, 1396, 1752
SspDI	GGCGCC	1 cut(s)	464
SspI	AATATT	1 cut(s)	232
SspMI	CTAG	5 cut(s)	314, 539, 1013, 1700, 1755
SstI	GAGCTC	2 cut(s)	918, 1694
StyD4I	CCNGG	4 cut(s)	348, 1068, 1410, 1411
StyI	CCWWGG	2 cut(s)	891, 1026
TaaI	ACNGT	6 cut(s)	407, 518, 803, 846, 951, 1778
TaiI	ACGT	8 cut(s)	445, 924, 939, 997, 1002, 1148, 1209, 1599
TaqI	TCGA	3 cut(s)	594, 691, 849
TaqII	GACCGA	1 cut(s)	1373
TatI	WGTACW	2 cut(s)	960, 1476
TauI	GCSGC	2 cut(s)	698, 1398
TfiI	GAWTC	5 cut(s)	1184, 1192, 1310, 1388, 1770
Tru1I	TTAA	3 cut(s)	759, 855, 1320
Tru9I	TTAA	3 cut(s)	759, 855, 1320
TscAI	CASTG	3 cut(s)	306, 808, 1202
TseFI	GTSAC	5 cut(s)	653, 990, 995, 1265, 1546
TseI	GCWGC	1 cut(s)	269
Tsp45I	GTSAC	5 cut(s)	653, 990, 995, 1265, 1546
TspDTI	ATGAA	5 cut(s)	638, 673, 1197, 1385, 1739
TspGWI	ACGGA	4 cut(s)	777, 786, 1505, 1621
TspMI	CCCGGG	1 cut(s)	1411
TspRI	CASTG	3 cut(s)	306, 808, 1202
Tth111I	GACNNNGTC	1 cut(s)	988
VpaK11BI	GGWCC	5 cut(s)	355, 868, 1300, 1408, 1566
XapI	RAATTY	3 cut(s)	1158, 1372, 1420
XceI	RCATGY	2 cut(s)	8, 108
XcmI	CCANNNNNNNNNTGG	1 cut(s)	506
XhoI	CTCGAG	2 cut(s)	593, 690
XmaI	CCCGGG	1 cut(s)	1411
XmiI	GTMKAC	1 cut(s)	439
XspI	CTAG	5 cut(s)	314, 539, 1013, 1700, 1755
ZraI	GACGTC	1 cut(s)	1146
ZrmI	AGTACT	1 cut(s)	962
Zsp2I	ATGCAT	2 cut(s)	6, 1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.