AT3G26700
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0001781
Physical Location & Seq
Forward (+)
9809582 .. 9812674
3093 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G26700.4

Sequence Viewer

Length: 1143 bp
ATGTCAGCAATTCTTGCAGCTGCCATTGGTGGTGCTGTAGGAGCTCTTGCATTGATTGCTTTGTTTGTTTTTCTCCTTTGGTTTTGTGTCTTTCGTCGTAAGAATCTGTCTAGAACTTCTGAGACTGGCTCTTCTGATCCATCTACTCAAGAAGGAAGAAATGTTGCAATTGAGTTGTCAATGAGAGAAGCTAGAAGATTTGAAATGGAGGAACTTGCTCAAGCCACCAAGAGTTTTACCAATAAAAGTCTTATTGGTATTGGCAAATTCGGCGAGGTTTACAAAGGTTTGCTTCAAGATGGTGTTCTTGTAGCTATCAAGAAAAGACCTGGTTTGCCTACTCAAGAATTTGTTAACGAGGTTCGTTATCTATCGTCTATCCATCACCGTAATCTCGTCACTCTTTTGGGGTTTTGCCAAGAAAGCAACACACAGTTTCTTGTCTACGAGTATGTTCCTAATGGAAGTGTTTCCAGTCACCTGTACGGTGCTGGTGGTAAAGTACCTGGTAATAGACTAGAGTTCAGACATAGGCTTGCAATATCTATAGGAGCAGCTAAAGGCTTGGCACATCTTCACTCGTTGAGTCCTCGGTTGATACACAAGGACTTCAAAACCGCTAATGTTCTTGTGGATGAAAATTTCATTGCTAAGGTTGCGGATGCAGGAGTCCGTAACTTCTTAGGAAGAGAGGATGTTGGTACATCGTCTCACATTGTTGCAGACCAGATTTTCCTCTCCCCAGAGGTTCAAGAGTTCAAAAGATTTTCAGAGAAAAGTGATGTCTATGCTTTTGGTGTATTCCTCTTGGAATTAGTAAGTGGAAGAGAAGCATCAGAACCATCCCCTTCAAGCTCAACGCAAACTCTAGTCGATTGGATGCAAAACTTAACGGATTACGCAGATATACCAATGATGATTGATGAGAGACTAGGAGGTACATACACAGCAGAAGGAGTTGAGGAACTTATTACATTGACACTAAGATGTGTTGATGTATCAAGTGAGAAGAGACCAACAATGAGTTTTGTTGTGACAGAGCTTGAAAGAATATTGGATAAAGAAGTGAGCTTAACAACAGTAATGGGTGAAGGTACTCCAACTGTTACTCTTGGAAGTCAGCTTTTTAAAGCAACCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

380

Amino Acids

41.78

Weight (kDa)

6.12

Isoelectric Point (pI)

35.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 79 - 282 9.6e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 82 - 299 1.3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 444
AciI CCGC 2 cut(s) 618, 659
AclWI GGATC 1 cut(s) 131
AcsI RAATTY 3 cut(s) 266, 347, 640
AfaI GTAC 5 cut(s) 485, 504, 703, 940, 1096
AgsI TTSAA 7 cut(s) 203, 296, 613, 752, 760, 852, 1046
AjnI CCWGG 2 cut(s) 328, 505
AluBI AGCT 9 cut(s) 20, 44, 191, 314, 557, 855, 1042, 1071, 1123
AluI AGCT 9 cut(s) 20, 44, 191, 314, 557, 855, 1042, 1071, 1123
Alw21I GWGCWC 1 cut(s) 46
Alw26I GTCTC 4 cut(s) 116, 714, 922, 1006
AlwI GGATC 1 cut(s) 131
ApeKI GCWGC 3 cut(s) 17, 20, 554
ApoI RAATTY 3 cut(s) 266, 347, 640
Asp700I GAANNNNTTC 1 cut(s) 469
AsuHPI GGTGA 3 cut(s) 377, 470, 1100
BanII GRGCYC 1 cut(s) 46
Bbv12I GWGCWC 1 cut(s) 46
BbvI GCAGC 3 cut(s) 7, 29, 566
BccI CCATC 4 cut(s) 148, 293, 390, 850
BciT130I CCWGG 2 cut(s) 330, 507
BcoDI GTCTC 4 cut(s) 116, 714, 922, 1006
BfaI CTAG 5 cut(s) 111, 192, 518, 869, 932
BfmI CTRYAG 2 cut(s) 36, 546
BisI GCNGC 3 cut(s) 18, 21, 555
BlsI GCNGC 3 cut(s) 19, 22, 556
Bme1390I CCNGG 2 cut(s) 330, 507
BmrFI CCNGG 2 cut(s) 330, 507
BmsI GCATC 3 cut(s) 652, 842, 870
BplI GAGNNNNNCTC 2 cut(s) 113, 145
Bpu10I CCTNAGC 1 cut(s) 651
BpuEI CTTGAG 3 cut(s) 132, 204, 327
BsaI GGTCTC 1 cut(s) 1006
BsaJI CCNNGG 1 cut(s) 590
Bse1I ACTGG 2 cut(s) 130, 474
Bse3DI GCAATG 1 cut(s) 645
BseBI CCWGG 2 cut(s) 330, 507
BseDI CCNNGG 1 cut(s) 590
BseGI GGATG 5 cut(s) 640, 667, 700, 842, 885
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 1 cut(s) 111
BseNI ACTGG 2 cut(s) 130, 474
BseXI GCAGC 3 cut(s) 7, 29, 566
BsiHKAI GWGCWC 1 cut(s) 46
BsmAI GTCTC 4 cut(s) 116, 714, 922, 1006
BsmBI CGTCTC 1 cut(s) 714
Bso31I GGTCTC 1 cut(s) 1006
Bsp1286I GDGCHC 1 cut(s) 46
Bsp143I GATC 1 cut(s) 136
BspACI CCGC 2 cut(s) 618, 659
BspCNI CTCAG 1 cut(s) 112
BspPI GGATC 1 cut(s) 131
BspQI GCTCTTC 1 cut(s) 136
BspTNI GGTCTC 1 cut(s) 1006
BsrDI GCAATG 1 cut(s) 645
BsrI ACTGG 2 cut(s) 130, 474
BssECI CCNNGG 1 cut(s) 590
BssMI GATC 1 cut(s) 136
Bst2UI CCWGG 2 cut(s) 330, 507
Bst4CI ACNGT 5 cut(s) 389, 435, 488, 1081, 1105
Bst6I CTCTTC 4 cut(s) 136, 682, 820, 1004
BstAPI GCANNNNNTGC 2 cut(s) 14, 56
BstC8I GCNNGC 1 cut(s) 537
BstDEI CTNAG 4 cut(s) 120, 651, 682, 983
BstF5I GGATG 5 cut(s) 640, 667, 700, 842, 885
BstKTI GATC 1 cut(s) 139
BstMAI GTCTC 4 cut(s) 116, 714, 922, 1006
BstMBI GATC 1 cut(s) 136
BstMWI GCNNNNNNNGC 6 cut(s) 14, 41, 56, 270, 423, 656
BstNI CCWGG 2 cut(s) 330, 507
BstSCI CCNGG 2 cut(s) 328, 505
BstSFI CTRYAG 2 cut(s) 36, 546
BstV1I GCAGC 3 cut(s) 7, 29, 566
BtsCI GGATG 5 cut(s) 640, 667, 700, 842, 885
Cac8I GCNNGC 1 cut(s) 537
CsiI ACCWGGT 2 cut(s) 328, 505
Csp6I GTAC 5 cut(s) 484, 503, 702, 939, 1095
CviQI GTAC 5 cut(s) 484, 503, 702, 939, 1095
DdeI CTNAG 4 cut(s) 120, 651, 682, 983
DpnI GATC 1 cut(s) 138
DpnII GATC 1 cut(s) 136
DraI TTTAAA 1 cut(s) 1129
Eam1104I CTCTTC 4 cut(s) 136, 682, 820, 1004
EarI CTCTTC 4 cut(s) 136, 682, 820, 1004
Ecl136II GAGCTC 1 cut(s) 44
Eco24I GRGCYC 1 cut(s) 46
Eco31I GGTCTC 1 cut(s) 1006
Eco53kI GAGCTC 1 cut(s) 44
EcoICRI GAGCTC 1 cut(s) 44
EcoRII CCWGG 2 cut(s) 328, 505
EcoT38I GRGCYC 1 cut(s) 46
Esp3I CGTCTC 1 cut(s) 714
FaiI YATR 6 cut(s) 453, 531, 548, 789, 908, 943
FalI AAGNNNNNCTT 2 cut(s) 276, 308
FblI GTMKAC 1 cut(s) 444
Fnu4HI GCNGC 3 cut(s) 18, 21, 555
FokI GGATG 5 cut(s) 647, 674, 707, 829, 892
FriOI GRGCYC 1 cut(s) 46
Fsp4HI GCNGC 3 cut(s) 18, 21, 555
FspBI CTAG 5 cut(s) 111, 192, 518, 869, 932
GluI GCNGC 3 cut(s) 18, 21, 555
HincII GTYRAC 1 cut(s) 355
HindII GTYRAC 1 cut(s) 355
HinfI GANTC 3 cut(s) 103, 586, 669
HpaI GTTAAC 1 cut(s) 355
HphI GGTGA 3 cut(s) 377, 470, 1100
Hpy166II GTNNAC 3 cut(s) 280, 355, 445
Hpy188I TCNGA 5 cut(s) 121, 136, 527, 772, 838
Hpy188III TCNNGA 6 cut(s) 111, 149, 296, 319, 344, 752
Hpy8I GTNNAC 3 cut(s) 280, 355, 445
Hpy99I CGWCG 1 cut(s) 99
HpyAV CCTTC 4 cut(s) 146, 858, 947, 1085
HpyCH4III ACNGT 5 cut(s) 389, 435, 488, 1081, 1105
HpyCH4V TGCA 7 cut(s) 17, 50, 167, 539, 665, 722, 883
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 41, 56, 270, 423, 656
HpyF3I CTNAG 4 cut(s) 120, 651, 682, 983
KspAI GTTAAC 1 cut(s) 355
Kzo9I GATC 1 cut(s) 136
LguI GCTCTTC 1 cut(s) 136
LmnI GCTCC 2 cut(s) 41, 551
Lsp1109I GCAGC 3 cut(s) 7, 29, 566
LweI GCATC 3 cut(s) 652, 842, 870
MabI ACCWGGT 2 cut(s) 328, 505
MaeI CTAG 5 cut(s) 111, 192, 518, 869, 932
MaeIII GTNAC 5 cut(s) 397, 476, 674, 1033, 1105
MalI GATC 1 cut(s) 138
MboI GATC 1 cut(s) 136
MboII GAAGA 7 cut(s) 123, 168, 207, 566, 699, 837, 1021
MfeI CAATTG 1 cut(s) 168
MhlI GDGCHC 1 cut(s) 46
MluCI AATT 6 cut(s) 9, 168, 266, 347, 640, 812
MlyI GAGTC 2 cut(s) 595, 678
MmeI TCCRAC 1 cut(s) 1124
MroXI GAANNNNTTC 1 cut(s) 469
MseI TTAA 4 cut(s) 354, 890, 1073, 1128
MslI CAYNNNNRTG 1 cut(s) 985
MspA1I CMGCKG 1 cut(s) 20
MspR9I CCNGG 2 cut(s) 330, 507
MunI CAATTG 1 cut(s) 168
MvaI CCWGG 2 cut(s) 330, 507
MwoI GCNNNNNNNGC 6 cut(s) 14, 41, 56, 270, 423, 656
NdeII GATC 1 cut(s) 136
NmuCI GTSAC 3 cut(s) 397, 476, 1033
PciSI GCTCTTC 1 cut(s) 136
PdmI GAANNNNTTC 1 cut(s) 469
PfeI GAWTC 1 cut(s) 103
PkrI GCNGC 3 cut(s) 19, 22, 556
PleI GAGTC 2 cut(s) 594, 677
PpsI GAGTC 2 cut(s) 594, 677
Psp124BI GAGCTC 1 cut(s) 46
Psp6I CCWGG 2 cut(s) 328, 505
PspGI CCWGG 2 cut(s) 328, 505
PvuII CAGCTG 1 cut(s) 20
RsaI GTAC 5 cut(s) 485, 504, 703, 940, 1096
RsaNI GTAC 5 cut(s) 484, 503, 702, 939, 1095
RseI CAYNNNNRTG 1 cut(s) 985
SacI GAGCTC 1 cut(s) 46
SapI GCTCTTC 1 cut(s) 136
SaqAI TTAA 4 cut(s) 354, 890, 1073, 1128
SatI GCNGC 3 cut(s) 18, 21, 555
Sau3AI GATC 1 cut(s) 136
SchI GAGTC 2 cut(s) 595, 678
ScrFI CCNGG 2 cut(s) 330, 507
SduI GDGCHC 1 cut(s) 46
SexAI ACCWGGT 2 cut(s) 328, 505
SfaNI GCATC 3 cut(s) 652, 842, 870
SfcI CTRYAG 2 cut(s) 36, 546
SmiMI CAYNNNNRTG 1 cut(s) 985
SmlI CTYRAG 3 cut(s) 147, 219, 342
SmoI CTYRAG 3 cut(s) 147, 219, 342
Sse9I AATT 6 cut(s) 9, 168, 266, 347, 640, 812
SsiI CCGC 2 cut(s) 618, 659
SspI AATATT 1 cut(s) 1053
SspMI CTAG 5 cut(s) 111, 192, 518, 869, 932
SstI GAGCTC 1 cut(s) 46
StyD4I CCNGG 2 cut(s) 328, 505
TaaI ACNGT 5 cut(s) 389, 435, 488, 1081, 1105
TaqI TCGA 1 cut(s) 873
TasI AATT 6 cut(s) 9, 168, 266, 347, 640, 812
TfiI GAWTC 1 cut(s) 103
Tru1I TTAA 4 cut(s) 354, 890, 1073, 1128
Tru9I TTAA 4 cut(s) 354, 890, 1073, 1128
TseFI GTSAC 3 cut(s) 397, 476, 1033
TseI GCWGC 3 cut(s) 17, 20, 554
Tsp45I GTSAC 3 cut(s) 397, 476, 1033
TspDTI ATGAA 2 cut(s) 634, 651
TspGWI ACGGA 2 cut(s) 662, 908
XapI RAATTY 3 cut(s) 266, 347, 640
XbaI TCTAGA 1 cut(s) 110
XmiI GTMKAC 1 cut(s) 444
XmnI GAANNNNTTC 1 cut(s) 469
XspI CTAG 5 cut(s) 111, 192, 518, 869, 932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.