FvH4_4g17600

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
21509688 .. 21513797
4110 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g17600.t4

Sequence Viewer

Length: 1122 bp
ATGTCAAACTCATCTTCTGCAGCCATAGTTGGAGGTTCTGTTGGAGCACTTGCCTTGGTGGCAATAGTCGTGGGATTCGTGTGGTTCTGCAAGACACAATGTGATAAGCATTTGTTCAACAAGAACTCGGAGACTGGTTCTTCAGATCCATCTGCAGTTGAGCTGAATAGGGGTGGACCTAGTTCAGCAAGGCACTTCACAATGGAGGAGTTGGAGCAAGCTACCAAGCATTTTGATGAAAGCAGTCTTCTGGGATTTGGAAGTTTTGGCCTTGTTTATAAAGGTTTGCTCCGTGATGGAACGGTTGTGGCTATCAAAAGGCGCCCCGGTGCTCCTAGACAGGAATTTGTCTCAGAGGTAACATACTTGTCGGAGATTCACCATCGAAACTTAGTTAAAATACTGGGATACTGCCAGGAAAGTGGATTTCAAATGTTGATTTTCGAATATTTACCAAATGGAAGCATTTCCAATCACCTATATGATACTAAACATGATCCGTCAATTAAGCTAGAGTTTAAGCAACGGCTATCTGTAGCTTTAGGGGCTGCTAAAGGTTTATGCCACTTGCATGGCCTAAGACCTCCAATCATACACAAGAACTTTCAAACTTCCAATGTCCTGGTTGATGAGAACTTCATTGCTAAAGTTTCAGATGCAGGGATTGCAAAACTACTCGAAAAGATAGAAGAAGCAGGTCCTTCTCACACATCCAGTGTCAATTTTTTCCAAGATCCAGAGGTTGGACCATCTGAGAGTGCTTCCTCTGAAGTGAGTGATGTTTACAGCTTTGGTGTTTTCCTTATGGAGATTATAACTGTACAAGAGACTTTGGATATTGGCTCCTTAGGATCTAATGAAAGTTTATTTCAATGGGTACAATCGCGGCTGAGTTCAAACAATTTAGTGGACAGTCGGCTTGCTGGAAGCTTCACTATAGAGGGAATGAGGGACATGATCAGGCTGACACTACAATGCATGAGTTTTCCAGGAGAAAGACGACCCAAGATGGAAATGGTTGTGGTTGAACTTGAGAGAATTCAAGAGAAAGAAATGGCAATGACAACAGTCATGGGTGAGGGAACTGATACAATCACTCTTGGAAGTGCACTATTTACTTGA

Protein Analysis

374

Amino Acids

40.91

Weight (kDa)

5.52

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 80 - 279 1.3e-24 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 82 - 343 7.6e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 279, 815
Acc36I ACCTGC 1 cut(s) 686
AccB1I GGYRCC 1 cut(s) 321
AccB7I CCANNNNNTGG 1 cut(s) 743
AccII CGCG 1 cut(s) 886
AciI CCGC 1 cut(s) 886
AclWI GGATC 4 cut(s) 140, 491, 728, 859
AcsI RAATTY 2 cut(s) 344, 1038
AcuI CTGAAG 2 cut(s) 126, 789
AcyI GRCGYC 1 cut(s) 322
AdeI CACNNNGTG 1 cut(s) 101
AfaI GTAC 2 cut(s) 822, 879
AfiI CCNNNNNNNGG 1 cut(s) 743
AgsI TTSAA 7 cut(s) 118, 431, 608, 872, 897, 1028, 1043
AjnI CCWGG 3 cut(s) 414, 621, 988
AluBI AGCT 6 cut(s) 163, 221, 511, 539, 789, 930
AluI AGCT 6 cut(s) 163, 221, 511, 539, 789, 930
Alw21I GWGCWC 3 cut(s) 49, 334, 1111
Alw26I GTCTC 3 cut(s) 125, 355, 821
Alw44I GTGCAC 1 cut(s) 1107
AlwI GGATC 4 cut(s) 140, 491, 728, 859
AoxI GGCC 2 cut(s) 268, 574
ApaLI GTGCAC 1 cut(s) 1107
ApeKI GCWGC 2 cut(s) 20, 548
ApoI RAATTY 2 cut(s) 344, 1038
Asp700I GAANNNNTTC 1 cut(s) 466
AspLEI GCGC 1 cut(s) 324
AspS9I GGNCC 3 cut(s) 176, 698, 746
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 3 cut(s) 371, 467, 1088
AsuII TTCGAA 1 cut(s) 444
AvaII GGWCC 3 cut(s) 176, 698, 746
AxyI CCTNAGG 1 cut(s) 847
BaeGI GKGCMC 1 cut(s) 1111
BanI GGYRCC 1 cut(s) 321
BbsI GAAGAC 1 cut(s) 239
Bbv12I GWGCWC 3 cut(s) 49, 334, 1111
BbvI GCAGC 2 cut(s) 32, 535
BccI CCATC 5 cut(s) 157, 290, 390, 757, 1003
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 3 cut(s) 416, 623, 990
BciVI GTATCC 1 cut(s) 401
BclI TGATCA 1 cut(s) 957
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 3 cut(s) 125, 355, 821
BfaI CTAG 3 cut(s) 180, 336, 512
BfmI CTRYAG 4 cut(s) 18, 153, 534, 936
BfoI RGCGCY 1 cut(s) 325
BfuAI ACCTGC 1 cut(s) 686
BfuI GTATCC 1 cut(s) 401
BglI GCCNNNNNGGC 1 cut(s) 59
BisI GCNGC 3 cut(s) 21, 549, 887
BlsI GCNGC 3 cut(s) 22, 550, 888
Bme1390I CCNGG 4 cut(s) 327, 416, 623, 990
Bme18I GGWCC 3 cut(s) 176, 698, 746
BmgT120I GGNCC 3 cut(s) 176, 698, 746
BmiI GGNNCC 2 cut(s) 323, 844
BmrFI CCNGG 4 cut(s) 327, 416, 623, 990
BmrI ACTGGG 1 cut(s) 413
BmsI GCATC 1 cut(s) 646
BmuI ACTGGG 1 cut(s) 413
BoxI GACNNNNGTC 1 cut(s) 1067
BpiI GAAGAC 1 cut(s) 239
Bpu14I TTCGAA 1 cut(s) 444
BpuEI CTTGAG 1 cut(s) 1052
BpuMI CCSGG 1 cut(s) 327
BsaHI GRCGYC 1 cut(s) 322
BsaJI CCNNGG 2 cut(s) 54, 325
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 1 cut(s) 743
Bse1I ACTGG 3 cut(s) 139, 408, 714
Bse21I CCTNAGG 1 cut(s) 847
Bse3DI GCAATG 2 cut(s) 639, 1065
BseBI CCWGG 3 cut(s) 416, 623, 990
BseDI CCNNGG 2 cut(s) 54, 325
BseGI GGATG 1 cut(s) 710
BseLI CCNNNNNNNGG 1 cut(s) 743
BseMI GCAATG 2 cut(s) 639, 1065
BseMII CTCAG 3 cut(s) 366, 744, 881
BseNI ACTGG 3 cut(s) 139, 408, 714
BseRI GAGGAG 1 cut(s) 221
BseSI GKGCMC 1 cut(s) 1111
BseXI GCAGC 2 cut(s) 32, 535
Bsh1236I CGCG 1 cut(s) 886
BshFI GGCC 2 cut(s) 270, 576
BshNI GGYRCC 1 cut(s) 321
BsiHKAI GWGCWC 3 cut(s) 49, 334, 1111
BsiSI CCGG 1 cut(s) 327
BslFI GGGAC 1 cut(s) 965
BslI CCNNNNNNNGG 1 cut(s) 743
BsmAI GTCTC 3 cut(s) 125, 355, 821
BsmFI GGGAC 1 cut(s) 965
BsnI GGCC 2 cut(s) 270, 576
Bsp119I TTCGAA 1 cut(s) 444
Bsp1286I GDGCHC 3 cut(s) 49, 334, 1111
Bsp1407I TGTACA 1 cut(s) 820
Bsp143I GATC 5 cut(s) 145, 496, 733, 851, 957
BspACI CCGC 1 cut(s) 886
BspANI GGCC 2 cut(s) 270, 576
BspCNI CTCAG 3 cut(s) 365, 745, 882
BspFNI CGCG 1 cut(s) 886
BspLI GGNNCC 2 cut(s) 323, 844
BspMAI CTGCAG 2 cut(s) 22, 157
BspMI ACCTGC 1 cut(s) 686
BspPI GGATC 4 cut(s) 140, 491, 728, 859
BspT104I TTCGAA 1 cut(s) 444
BspT107I GGYRCC 1 cut(s) 321
BsrDI GCAATG 2 cut(s) 639, 1065
BsrGI TGTACA 1 cut(s) 820
BsrI ACTGG 3 cut(s) 139, 408, 714
BssECI CCNNGG 2 cut(s) 54, 325
BssMI GATC 5 cut(s) 145, 496, 733, 851, 957
BssNI GRCGYC 1 cut(s) 322
BssT1I CCWWGG 1 cut(s) 54
Bst2UI CCWGG 3 cut(s) 416, 623, 990
Bst4CI ACNGT 4 cut(s) 304, 820, 914, 1069
BstACI GRCGYC 1 cut(s) 322
BstAPI GCANNNNNTGC 1 cut(s) 665
BstAUI TGTACA 1 cut(s) 820
BstBI TTCGAA 1 cut(s) 444
BstC8I GCNNGC 2 cut(s) 219, 921
BstDEI CTNAG 6 cut(s) 352, 391, 578, 753, 847, 890
BstF5I GGATG 1 cut(s) 710
BstFNI CGCG 1 cut(s) 886
BstH2I RGCGCY 1 cut(s) 325
BstHHI GCGC 1 cut(s) 324
BstKTI GATC 5 cut(s) 148, 499, 736, 854, 960
BstMAI GTCTC 3 cut(s) 125, 355, 821
BstMBI GATC 5 cut(s) 145, 496, 733, 851, 957
BstMWI GCNNNNNNNGC 3 cut(s) 59, 545, 665
BstNI CCWGG 3 cut(s) 416, 623, 990
BstPAI GACNNNNGTC 1 cut(s) 1067
BstSCI CCNGG 4 cut(s) 325, 414, 621, 988
BstSFI CTRYAG 4 cut(s) 18, 153, 534, 936
BstSLI GKGCMC 1 cut(s) 1111
BstUI CGCG 1 cut(s) 886
BstV1I GCAGC 2 cut(s) 32, 535
BstV2I GAAGAC 1 cut(s) 239
BstX2I RGATCY 3 cut(s) 145, 733, 851
BstXI CCANNNNNNTGG 3 cut(s) 422, 572, 622
BstYI RGATCY 3 cut(s) 145, 733, 851
Bsu36I CCTNAGG 1 cut(s) 847
BsuI GTATCC 1 cut(s) 401
BsuRI GGCC 2 cut(s) 270, 576
BtsCI GGATG 1 cut(s) 710
BtsIMutI CAGTG 1 cut(s) 721
BveI ACCTGC 1 cut(s) 686
Cac8I GCNNGC 2 cut(s) 219, 921
CfoI GCGC 1 cut(s) 324
Cfr13I GGNCC 3 cut(s) 176, 698, 746
Csp6I GTAC 2 cut(s) 821, 878
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviAII CATG 5 cut(s) 494, 572, 955, 979, 1072
CviQI GTAC 2 cut(s) 821, 878
DdeI CTNAG 6 cut(s) 352, 391, 578, 753, 847, 890
DinI GGCGCC 1 cut(s) 323
DpnI GATC 5 cut(s) 147, 498, 735, 853, 959
DpnII GATC 5 cut(s) 145, 496, 733, 851, 957
DraIII CACNNNGTG 1 cut(s) 101
Eco130I CCWWGG 1 cut(s) 54
Eco47I GGWCC 3 cut(s) 176, 698, 746
Eco57I CTGAAG 2 cut(s) 126, 789
Eco81I CCTNAGG 1 cut(s) 847
EcoO109I RGGNCCY 1 cut(s) 698
EcoRI GAATTC 1 cut(s) 1038
EcoRII CCWGG 3 cut(s) 414, 621, 988
EcoT14I CCWWGG 1 cut(s) 54
EcoT22I ATGCAT 1 cut(s) 980
EgeI GGCGCC 1 cut(s) 323
EheI GGCGCC 1 cut(s) 323
ErhI CCWWGG 1 cut(s) 54
FaeI CATG 5 cut(s) 497, 575, 958, 982, 1075
FaqI GGGAC 1 cut(s) 965
FatI CATG 5 cut(s) 493, 571, 954, 978, 1071
FbaI TGATCA 1 cut(s) 957
Fnu4HI GCNGC 3 cut(s) 21, 549, 887
FokI GGATG 1 cut(s) 697
Fsp4HI GCNGC 3 cut(s) 21, 549, 887
FspBI CTAG 3 cut(s) 180, 336, 512
GlaI GCGC 1 cut(s) 323
GluI GCNGC 3 cut(s) 21, 549, 887
HaeII RGCGCY 1 cut(s) 325
HaeIII GGCC 2 cut(s) 270, 576
HapII CCGG 1 cut(s) 327
HhaI GCGC 1 cut(s) 324
Hin1I GRCGYC 1 cut(s) 322
Hin1II CATG 5 cut(s) 497, 575, 958, 982, 1075
Hin6I GCGC 1 cut(s) 322
HinP1I GCGC 1 cut(s) 322
HindIII AAGCTT 1 cut(s) 928
HinfI GANTC 2 cut(s) 75, 376
HpaII CCGG 1 cut(s) 327
HphI GGTGA 3 cut(s) 371, 467, 1088
Hpy166II GTNNAC 4 cut(s) 176, 784, 910, 1109
Hpy188I TCNGA 7 cut(s) 130, 145, 355, 373, 655, 754, 769
Hpy188III TCNNGA 2 cut(s) 737, 1043
Hpy8I GTNNAC 4 cut(s) 176, 784, 910, 1109
HpyAV CCTTC 1 cut(s) 711
HpyCH4III ACNGT 4 cut(s) 304, 820, 914, 1069
HpyCH4V TGCA 8 cut(s) 20, 90, 155, 571, 659, 668, 978, 1109
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 545, 665
HpyF3I CTNAG 6 cut(s) 352, 391, 578, 753, 847, 890
Hsp92I GRCGYC 1 cut(s) 322
Hsp92II CATG 5 cut(s) 497, 575, 958, 982, 1075
HspAI GCGC 1 cut(s) 322
KasI GGCGCC 1 cut(s) 321
Ksp22I TGATCA 1 cut(s) 957
Kzo9I GATC 5 cut(s) 145, 496, 733, 851, 957
LmnI GCTCC 5 cut(s) 44, 214, 294, 337, 848
Lsp1109I GCAGC 2 cut(s) 32, 535
LweI GCATC 1 cut(s) 646
MaeI CTAG 3 cut(s) 180, 336, 512
MaeIII GTNAC 1 cut(s) 358
MalI GATC 5 cut(s) 147, 498, 735, 853, 959
MboI GATC 5 cut(s) 145, 496, 733, 851, 957
MboII GAAGA 4 cut(s) 6, 132, 239, 701
MflI RGATCY 3 cut(s) 145, 733, 851
MhlI GDGCHC 3 cut(s) 49, 334, 1111
MluCI AATT 5 cut(s) 344, 504, 721, 901, 1038
Mly113I GGCGCC 1 cut(s) 322
MmeI TCCRAC 5 cut(s) 10, 22, 192, 351, 724
MnlI CCTC 9 cut(s) 26, 199, 349, 594, 733, 775, 934, 942, 1072
Mph1103I ATGCAT 1 cut(s) 980
MroXI GAANNNNTTC 1 cut(s) 466
MseI TTAA 3 cut(s) 396, 507, 519
MslI CAYNNNNRTG 4 cut(s) 234, 480, 570, 973
MspI CCGG 1 cut(s) 327
MspR9I CCNGG 4 cut(s) 327, 416, 623, 990
MvaI CCWGG 3 cut(s) 416, 623, 990
MvnI CGCG 1 cut(s) 886
MwoI GCNNNNNNNGC 3 cut(s) 59, 545, 665
NarI GGCGCC 1 cut(s) 322
NciI CCSGG 1 cut(s) 327
NdeII GATC 5 cut(s) 145, 496, 733, 851, 957
NlaIII CATG 5 cut(s) 497, 575, 958, 982, 1075
NlaIV GGNNCC 2 cut(s) 323, 844
NsiI ATGCAT 1 cut(s) 980
NspV TTCGAA 1 cut(s) 444
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PdmI GAANNNNTTC 1 cut(s) 466
PfeI GAWTC 2 cut(s) 75, 376
PflMI CCANNNNNTGG 1 cut(s) 743
PfoI TCCNGGA 1 cut(s) 988
PkrI GCNGC 3 cut(s) 22, 550, 888
PluTI GGCGCC 1 cut(s) 325
PpuMI RGGWCCY 1 cut(s) 698
PshAI GACNNNNGTC 1 cut(s) 1067
PsiI TTATAA 2 cut(s) 279, 815
Psp5II RGGWCCY 1 cut(s) 698
Psp6I CCWGG 3 cut(s) 414, 621, 988
PspGI CCWGG 3 cut(s) 414, 621, 988
PspN4I GGNNCC 2 cut(s) 323, 844
PspPI GGNCC 3 cut(s) 176, 698, 746
PspPPI RGGWCCY 1 cut(s) 698
PstI CTGCAG 2 cut(s) 22, 157
PsuI RGATCY 3 cut(s) 145, 733, 851
RsaI GTAC 2 cut(s) 822, 879
RsaNI GTAC 2 cut(s) 821, 878
RseI CAYNNNNRTG 4 cut(s) 234, 480, 570, 973
SaqAI TTAA 3 cut(s) 396, 507, 519
SatI GCNGC 3 cut(s) 21, 549, 887
Sau3AI GATC 5 cut(s) 145, 496, 733, 851, 957
Sau96I GGNCC 3 cut(s) 176, 698, 746
ScrFI CCNGG 4 cut(s) 327, 416, 623, 990
SduI GDGCHC 3 cut(s) 49, 334, 1111
SfaNI GCATC 1 cut(s) 646
SfcI CTRYAG 4 cut(s) 18, 153, 534, 936
SfoI GGCGCC 1 cut(s) 323
SfuI TTCGAA 1 cut(s) 444
SinI GGWCC 3 cut(s) 176, 698, 746
SmiMI CAYNNNNRTG 4 cut(s) 234, 480, 570, 973
SmlI CTYRAG 1 cut(s) 1031
SmoI CTYRAG 1 cut(s) 1031
Sse9I AATT 5 cut(s) 344, 504, 721, 901, 1038
SsiI CCGC 1 cut(s) 886
SspDI GGCGCC 1 cut(s) 321
SspI AATATT 1 cut(s) 449
SspMI CTAG 3 cut(s) 180, 336, 512
StyD4I CCNGG 4 cut(s) 325, 414, 621, 988
StyI CCWWGG 1 cut(s) 54
TaaI ACNGT 4 cut(s) 304, 820, 914, 1069
TaqI TCGA 3 cut(s) 385, 444, 678
TasI AATT 5 cut(s) 344, 504, 721, 901, 1038
TatI WGTACW 1 cut(s) 820
TauI GCSGC 1 cut(s) 889
TfiI GAWTC 2 cut(s) 75, 376
Tru1I TTAA 3 cut(s) 396, 507, 519
Tru9I TTAA 3 cut(s) 396, 507, 519
TscAI CASTG 1 cut(s) 721
TseI GCWGC 2 cut(s) 20, 548
TspDTI ATGAA 3 cut(s) 252, 628, 873
TspGWI ACGGA 2 cut(s) 281, 489
TspRI CASTG 1 cut(s) 721
Van91I CCANNNNNTGG 1 cut(s) 743
VneI GTGCAC 1 cut(s) 1107
VpaK11BI GGWCC 3 cut(s) 176, 698, 746
XapI RAATTY 2 cut(s) 344, 1038
XcmI CCANNNNNNNNNTGG 1 cut(s) 1012
XmnI GAANNNNTTC 1 cut(s) 466
XspI CTAG 3 cut(s) 180, 336, 512
Zsp2I ATGCAT 1 cut(s) 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.