pycom13g14700

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
10653222 .. 10655216
1995 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g14700.1

Sequence Viewer

Length: 1134 bp
ATGCCAAAGCCATCTGCTGCTATAGTTGGAGGAGGTGCCGCTGGGGCACTTGCCTTGCTCGTAGTCGTCATCGCATTCGTGTGGTTCTGCAGGAACCATTGCAAGAGTTTTTCGAACAAGAACTCTGAAACGGGTTCCTCAGATCCATCTGCAATAGTGGAATGGAATAGGGGTGGGCCAGGCTCGGAAGCAAGACATGGGCCGAGGCTTTTCACATTGGAGGAGTTAGACCAGGCAACCAAGCATTTTGATGAAAGCAGTCTGCTGGGATATGGAAGCTTTGGCCTGGTTTATAAAGGATTGCTGCGTGATGGGACTGTTGTGGCTATCAAACGGAGGTCTGGTGCTCCTAGACAAGATTTTGTCTCACAGGTGACATACTTGTCGGAGATTCATCATCGACATTTAGTTAGAATTCTCGGTTACTGCCAGGAAAGTGGATTTCAAGTACTGGTTTATGAGTATTTACCAAGTGGCAGCGTCTGCAATCACCTATATGATACTAGATCGGAGCCATCAACTAAATTCGAGTTTAAGCAAAGGCTATCAATAGCTTTAGGTGCTGCGAAAGGTTTATCCCACTTGCACGGACTAAAGCCTCCCATAGTACACAAAAACTTCAAAACAGCCAATGTATTGGTTGACGAGAACTTCACTGCTAAGGTTGCAGATGCAGGGATCTCAAAACTGCTGGAGAAGATTGAAGAAGCAGGTCCTTCACGCACATCTAGTGTCAATTTTTTTGAAGATCCAGAGGCTGGATCATCCGGGGTTACCTCCGAAATGAGTGATGTGTACAGCTTTGGGGTTTTCGCTTTGGAGCTTCTAACTGGACAGGAGGCTTTGCACATTGGCTTCTTGGGATCAAATGAAAGCTTATTTCAATGGGTGGAATCATGGCTGAGTTCAAATAACCTAGCGGACCGCCGGCTAGCTGGAAGCTTCACAGCAGAGGGAATGAGGGACTTGATCAGGCTGACACTGCAATGCATGAGTTTTCCGGAAAAAAGGCGGCCGAAGATGGAGATGGTTGTAATGGAGCTTGAAAGGATTCAGGAGAAAGAAATGTCAATGACAACAGTCATGGGTGAGGGAACTGATACTATCACTCTTGGTAGTGTACTATTTACTTGA

Protein Analysis

378

Amino Acids

41.4

Weight (kDa)

6.15

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 85 - 283 2.5e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 87 - 348 6.3e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 294
AasI GACNNNNNNGTC 1 cut(s) 382
Acc36I ACCTGC 1 cut(s) 701
AccB1I GGYRCC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 758
AccIII TCCGGA 1 cut(s) 1000
AciI CCGC 4 cut(s) 39, 920, 925, 1012
AclWI GGATC 5 cut(s) 137, 686, 743, 769, 871
AcoI YGGCCR 1 cut(s) 1013
AcsI RAATTY 2 cut(s) 414, 524
AfaI GTAC 4 cut(s) 450, 609, 797, 1122
AfiI CCNNNNNNNGG 1 cut(s) 758
AgsI TTSAA 7 cut(s) 446, 622, 704, 746, 884, 909, 1046
AjnI CCWGG 4 cut(s) 178, 231, 285, 429
AluBI AGCT 8 cut(s) 279, 554, 801, 823, 876, 935, 942, 1042
AluI AGCT 8 cut(s) 279, 554, 801, 823, 876, 935, 942, 1042
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 1 cut(s) 370
AlwI GGATC 5 cut(s) 137, 686, 743, 769, 871
AlwNI CAGNNNCTG 2 cut(s) 483, 758
Aor13HI TCCGGA 1 cut(s) 1000
AoxI GGCC 4 cut(s) 176, 200, 283, 1013
ApeKI GCWGC 4 cut(s) 17, 304, 477, 563
ApoI RAATTY 2 cut(s) 414, 524
Asp700I GAANNNNTTC 1 cut(s) 1050
AspS9I GGNCC 4 cut(s) 176, 200, 713, 922
AsuC2I CCSGG 1 cut(s) 769
AsuHPI GGTGA 3 cut(s) 385, 482, 1100
AsuII TTCGAA 1 cut(s) 113
AsuNHI GCTAGC 1 cut(s) 931
AvaII GGWCC 2 cut(s) 713, 922
BaeGI GKGCMC 1 cut(s) 49
BanI GGYRCC 1 cut(s) 35
Bbv12I GWGCWC 1 cut(s) 349
BbvI GCAGC 4 cut(s) 4, 291, 489, 550
BccI CCATC 6 cut(s) 19, 154, 305, 523, 1015, 1021
BciT130I CCWGG 4 cut(s) 180, 233, 287, 431
BclI TGATCA 1 cut(s) 969
BcnI CCSGG 1 cut(s) 769
BcoDI GTCTC 1 cut(s) 370
BfaI CTAG 5 cut(s) 351, 504, 729, 917, 932
BfmI CTRYAG 2 cut(s) 21, 88
BfuAI ACCTGC 1 cut(s) 701
BglI GCCNNNNNGGC 1 cut(s) 44
BisI GCNGC 6 cut(s) 18, 39, 305, 478, 564, 1013
BlsI GCNGC 6 cut(s) 19, 40, 306, 479, 565, 1014
BmcAI AGTACT 1 cut(s) 450
Bme1390I CCNGG 5 cut(s) 180, 233, 287, 431, 769
Bme18I GGWCC 2 cut(s) 713, 922
BmgT120I GGNCC 4 cut(s) 176, 200, 713, 922
BmiI GGNNCC 4 cut(s) 37, 95, 136, 513
BmrFI CCNGG 5 cut(s) 180, 233, 287, 431, 769
BmsI GCATC 1 cut(s) 661
BmtI GCTAGC 1 cut(s) 935
BoxI GACNNNNGTC 1 cut(s) 1079
BpmI CTGGAG 1 cut(s) 713
Bpu10I CCTNAGC 1 cut(s) 660
Bpu14I TTCGAA 1 cut(s) 113
BpuMI CCSGG 1 cut(s) 769
BsaJI CCNNGG 2 cut(s) 203, 768
BsaWI WCCGGW 1 cut(s) 1000
BsaXI ACNNNNNCTCC 2 cut(s) 328, 358
Bsc4I CCNNNNNNNGG 1 cut(s) 758
Bse118I RCCGGY 1 cut(s) 927
Bse1I ACTGG 2 cut(s) 456, 835
Bse3DI GCAATG 2 cut(s) 97, 992
BseAI TCCGGA 1 cut(s) 1000
BseBI CCWGG 4 cut(s) 180, 233, 287, 431
BseDI CCNNGG 2 cut(s) 203, 768
BseGI GGATG 1 cut(s) 764
BseLI CCNNNNNNNGG 1 cut(s) 758
BseMI GCAATG 2 cut(s) 97, 992
BseMII CTCAG 2 cut(s) 153, 893
BseNI ACTGG 2 cut(s) 456, 835
BseRI GAGGAG 2 cut(s) 45, 236
BseSI GKGCMC 1 cut(s) 49
BseX3I CGGCCG 1 cut(s) 1013
BseXI GCAGC 4 cut(s) 4, 291, 489, 550
BseYI CCCAGC 2 cut(s) 41, 265
Bsh1285I CGRYCG 1 cut(s) 1016
BshFI GGCC 4 cut(s) 178, 202, 285, 1015
BshNI GGYRCC 1 cut(s) 35
BsiEI CGRYCG 1 cut(s) 1016
BsiHKAI GWGCWC 1 cut(s) 349
BsiSI CCGG 3 cut(s) 768, 928, 1001
BslFI GGGAC 2 cut(s) 328, 977
BslI CCNNNNNNNGG 1 cut(s) 758
BsmAI GTCTC 1 cut(s) 370
BsmFI GGGAC 2 cut(s) 328, 977
BsmI GAATGC 1 cut(s) 74
BsnI GGCC 4 cut(s) 178, 202, 285, 1015
Bsp119I TTCGAA 1 cut(s) 113
Bsp1286I GDGCHC 2 cut(s) 49, 349
Bsp13I TCCGGA 1 cut(s) 1000
Bsp1407I TGTACA 1 cut(s) 795
Bsp143I GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
BspACI CCGC 4 cut(s) 39, 920, 925, 1012
BspANI GGCC 4 cut(s) 178, 202, 285, 1015
BspCNI CTCAG 2 cut(s) 152, 894
BspEI TCCGGA 1 cut(s) 1000
BspLI GGNNCC 4 cut(s) 37, 95, 136, 513
BspMAI CTGCAG 1 cut(s) 92
BspMI ACCTGC 1 cut(s) 701
BspOI GCTAGC 1 cut(s) 935
BspPI GGATC 5 cut(s) 137, 686, 743, 769, 871
BspT104I TTCGAA 1 cut(s) 113
BspT107I GGYRCC 1 cut(s) 35
BsrDI GCAATG 2 cut(s) 97, 992
BsrFI RCCGGY 1 cut(s) 927
BsrGI TGTACA 1 cut(s) 795
BsrI ACTGG 2 cut(s) 456, 835
BssAI RCCGGY 1 cut(s) 927
BssECI CCNNGG 2 cut(s) 203, 768
BssMI GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
Bst2UI CCWGG 4 cut(s) 180, 233, 287, 431
Bst4CI ACNGT 2 cut(s) 319, 1081
BstAPI GCANNNNNTGC 1 cut(s) 483
BstAUI TGTACA 1 cut(s) 795
BstBI TTCGAA 1 cut(s) 113
BstC8I GCNNGC 2 cut(s) 929, 933
BstDEI CTNAG 3 cut(s) 139, 660, 902
BstEII GGTNACC 1 cut(s) 772
BstF5I GGATG 1 cut(s) 764
BstKTI GATC 7 cut(s) 145, 509, 681, 751, 764, 866, 972
BstMAI GTCTC 1 cut(s) 370
BstMBI GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
BstMCI CGRYCG 1 cut(s) 1016
BstMWI GCNNNNNNNGC 5 cut(s) 44, 483, 560, 665, 982
BstNI CCWGG 4 cut(s) 180, 233, 287, 431
BstPAI GACNNNNGTC 1 cut(s) 1079
BstPI GGTNACC 1 cut(s) 772
BstSCI CCNGG 5 cut(s) 178, 231, 285, 429, 767
BstSFI CTRYAG 2 cut(s) 21, 88
BstSLI GKGCMC 1 cut(s) 49
BstV1I GCAGC 4 cut(s) 4, 291, 489, 550
BstX2I RGATCY 3 cut(s) 142, 678, 748
BstXI CCANNNNNNTGG 2 cut(s) 437, 637
BstYI RGATCY 3 cut(s) 142, 678, 748
BstZI CGGCCG 1 cut(s) 1013
BsuRI GGCC 4 cut(s) 178, 202, 285, 1015
BtgZI GCGATG 1 cut(s) 55
BtsCI GGATG 1 cut(s) 764
BtsI GCAGTG 2 cut(s) 654, 980
BtsIMutI CAGTG 2 cut(s) 654, 980
BveI ACCTGC 1 cut(s) 701
Cac8I GCNNGC 2 cut(s) 929, 933
CaiI CAGNNNCTG 2 cut(s) 483, 758
Cfr10I RCCGGY 1 cut(s) 927
Cfr13I GGNCC 4 cut(s) 176, 200, 713, 922
CpoI CGGWCCG 1 cut(s) 922
CseI GACGC 1 cut(s) 469
Csp6I GTAC 4 cut(s) 449, 608, 796, 1121
CspI CGGWCCG 1 cut(s) 922
CviAII CATG 4 cut(s) 197, 897, 991, 1084
CviQI GTAC 4 cut(s) 449, 608, 796, 1121
DdeI CTNAG 3 cut(s) 139, 660, 902
DpnI GATC 7 cut(s) 144, 508, 680, 750, 763, 865, 971
DpnII GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
DrdI GACNNNNNNGTC 1 cut(s) 382
DseDI GACNNNNNNGTC 1 cut(s) 382
EaeI YGGCCR 1 cut(s) 1013
EagI CGGCCG 1 cut(s) 1013
EclXI CGGCCG 1 cut(s) 1013
Eco47I GGWCC 2 cut(s) 713, 922
Eco52I CGGCCG 1 cut(s) 1013
Eco91I GGTNACC 1 cut(s) 772
EcoO109I RGGNCCY 1 cut(s) 713
EcoO65I GGTNACC 1 cut(s) 772
EcoRI GAATTC 1 cut(s) 414
EcoRII CCWGG 4 cut(s) 178, 231, 285, 429
EcoT22I ATGCAT 1 cut(s) 992
FaeI CATG 4 cut(s) 200, 900, 994, 1087
FaqI GGGAC 2 cut(s) 328, 977
FatI CATG 4 cut(s) 196, 896, 990, 1083
FbaI TGATCA 1 cut(s) 969
Fnu4HI GCNGC 6 cut(s) 18, 39, 305, 478, 564, 1013
FokI GGATG 1 cut(s) 751
Fsp4HI GCNGC 6 cut(s) 18, 39, 305, 478, 564, 1013
FspBI CTAG 5 cut(s) 351, 504, 729, 917, 932
GluI GCNGC 6 cut(s) 18, 39, 305, 478, 564, 1013
GsaI CCCAGC 2 cut(s) 45, 269
GsuI CTGGAG 1 cut(s) 713
HaeIII GGCC 4 cut(s) 178, 202, 285, 1015
HapII CCGG 3 cut(s) 768, 928, 1001
HgaI GACGC 1 cut(s) 469
Hin1II CATG 4 cut(s) 200, 900, 994, 1087
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 3 cut(s) 277, 874, 940
HinfI GANTC 3 cut(s) 391, 893, 1051
HpaII CCGG 3 cut(s) 768, 928, 1001
HphI GGTGA 3 cut(s) 385, 482, 1100
Hpy166II GTNNAC 4 cut(s) 610, 643, 796, 1121
Hpy188I TCNGA 6 cut(s) 127, 142, 187, 388, 511, 781
Hpy188III TCNNGA 3 cut(s) 752, 1001, 1055
Hpy8I GTNNAC 4 cut(s) 610, 643, 796, 1121
HpyAV CCTTC 1 cut(s) 726
HpyCH4III ACNGT 2 cut(s) 319, 1081
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 483, 560, 665, 982
HpyF3I CTNAG 3 cut(s) 139, 660, 902
Hsp92II CATG 4 cut(s) 200, 900, 994, 1087
Kpn2I TCCGGA 1 cut(s) 1000
KroI GCCGGC 1 cut(s) 927
KroNI GCCGGC 1 cut(s) 929
Ksp22I TGATCA 1 cut(s) 969
Kzo9I GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
LmnI GCTCC 4 cut(s) 352, 511, 820, 1039
Lsp1109I GCAGC 4 cut(s) 4, 291, 489, 550
LweI GCATC 1 cut(s) 661
MaeI CTAG 5 cut(s) 351, 504, 729, 917, 932
MaeIII GTNAC 3 cut(s) 373, 422, 772
MalI GATC 7 cut(s) 144, 508, 680, 750, 763, 865, 971
MboI GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
MboII GAAGA 4 cut(s) 709, 716, 758, 1030
MflI RGATCY 3 cut(s) 142, 678, 748
MhlI GDGCHC 2 cut(s) 49, 349
MluCI AATT 3 cut(s) 414, 524, 736
MmeI TCCRAC 2 cut(s) 7, 366
Mph1103I ATGCAT 1 cut(s) 992
MroI TCCGGA 1 cut(s) 1000
MroNI GCCGGC 1 cut(s) 927
MroXI GAANNNNTTC 1 cut(s) 1050
MseI TTAA 1 cut(s) 534
MslI CAYNNNNRTG 4 cut(s) 79, 249, 495, 985
MspA1I CMGCKG 1 cut(s) 41
MspI CCGG 3 cut(s) 768, 928, 1001
MspR9I CCNGG 5 cut(s) 180, 233, 287, 431, 769
Mva1269I GAATGC 1 cut(s) 74
MvaI CCWGG 4 cut(s) 180, 233, 287, 431
MwoI GCNNNNNNNGC 5 cut(s) 44, 483, 560, 665, 982
NaeI GCCGGC 1 cut(s) 929
NciI CCSGG 1 cut(s) 769
NdeII GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
NgoMIV GCCGGC 1 cut(s) 927
NheI GCTAGC 1 cut(s) 931
NlaIII CATG 4 cut(s) 200, 900, 994, 1087
NlaIV GGNNCC 4 cut(s) 37, 95, 136, 513
NmeAIII GCCGAG 1 cut(s) 228
NmuCI GTSAC 1 cut(s) 373
NsiI ATGCAT 1 cut(s) 992
NspV TTCGAA 1 cut(s) 113
PctI GAATGC 1 cut(s) 74
PdiI GCCGGC 1 cut(s) 929
PdmI GAANNNNTTC 1 cut(s) 1050
PfeI GAWTC 3 cut(s) 391, 893, 1051
PflMI CCANNNNNTGG 1 cut(s) 758
PkrI GCNGC 6 cut(s) 19, 40, 306, 479, 565, 1014
PpuMI RGGWCCY 1 cut(s) 713
PshAI GACNNNNGTC 1 cut(s) 1079
PsiI TTATAA 1 cut(s) 294
Psp5II RGGWCCY 1 cut(s) 713
Psp6I CCWGG 4 cut(s) 178, 231, 285, 429
PspEI GGTNACC 1 cut(s) 772
PspFI CCCAGC 2 cut(s) 41, 265
PspGI CCWGG 4 cut(s) 178, 231, 285, 429
PspN4I GGNNCC 4 cut(s) 37, 95, 136, 513
PspPI GGNCC 4 cut(s) 176, 200, 713, 922
PspPPI RGGWCCY 1 cut(s) 713
PstI CTGCAG 1 cut(s) 92
PstNI CAGNNNCTG 2 cut(s) 483, 758
PsuI RGATCY 3 cut(s) 142, 678, 748
RsaI GTAC 4 cut(s) 450, 609, 797, 1122
RsaNI GTAC 4 cut(s) 449, 608, 796, 1121
RseI CAYNNNNRTG 4 cut(s) 79, 249, 495, 985
Rsr2I CGGWCCG 1 cut(s) 922
RsrII CGGWCCG 1 cut(s) 922
SaqAI TTAA 1 cut(s) 534
SatI GCNGC 6 cut(s) 18, 39, 305, 478, 564, 1013
Sau3AI GATC 7 cut(s) 142, 506, 678, 748, 761, 863, 969
Sau96I GGNCC 4 cut(s) 176, 200, 713, 922
ScaI AGTACT 1 cut(s) 450
ScrFI CCNGG 5 cut(s) 180, 233, 287, 431, 769
SduI GDGCHC 2 cut(s) 49, 349
SfaNI GCATC 1 cut(s) 661
SfcI CTRYAG 2 cut(s) 21, 88
SfuI TTCGAA 1 cut(s) 113
SinI GGWCC 2 cut(s) 713, 922
SmiMI CAYNNNNRTG 4 cut(s) 79, 249, 495, 985
Sse9I AATT 3 cut(s) 414, 524, 736
SsiI CCGC 4 cut(s) 39, 920, 925, 1012
SspMI CTAG 5 cut(s) 351, 504, 729, 917, 932
StyD4I CCNGG 5 cut(s) 178, 231, 285, 429, 767
TaaI ACNGT 2 cut(s) 319, 1081
TaqI TCGA 3 cut(s) 113, 400, 528
TasI AATT 3 cut(s) 414, 524, 736
TatI WGTACW 4 cut(s) 448, 607, 795, 1120
TauI GCSGC 2 cut(s) 41, 1015
TfiI GAWTC 3 cut(s) 391, 893, 1051
Tru1I TTAA 1 cut(s) 534
Tru9I TTAA 1 cut(s) 534
TscAI CASTG 2 cut(s) 661, 987
TseFI GTSAC 1 cut(s) 373
TseI GCWGC 4 cut(s) 17, 304, 477, 563
Tsp45I GTSAC 1 cut(s) 373
TspDTI ATGAA 3 cut(s) 267, 383, 885
TspGWI ACGGA 2 cut(s) 349, 603
TspRI CASTG 2 cut(s) 661, 987
Van91I CCANNNNNTGG 1 cut(s) 758
VpaK11BI GGWCC 2 cut(s) 713, 922
XapI RAATTY 2 cut(s) 414, 524
XmnI GAANNNNTTC 1 cut(s) 1050
XspI CTAG 5 cut(s) 351, 504, 729, 917, 932
ZrmI AGTACT 1 cut(s) 450
Zsp2I ATGCAT 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.