Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012193

Physical Location & Seq

Genomic Coordinates Forward (+)

16840652 .. 16845580

Gene Structure 4929 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G45830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3897 bp

ATGGCGATCGAGAAGAGTAACGTCAAGGTTTCGAGGTTTGATCTAGAGTACTCTCATGGTAGTGGTGATTCTATGTCAAGTTACGAAGAAAGACGTAAAAACTCAGTGGTGAATAATGTTGATTCGGAGGATGAAGATGATGATTTTGATGAAGATGATTCTGGAGCAGGTTCTGATGATTTTGATTTGCTTGAATTGGCGGAAACTGGTGCTGAGTTTTGTCAAGTTGGGAATGTTACTTGTAGTATTCCTTTTGAGTTGTATGATCTCCCTAGTCTTGAAGATATACTCTCTGTTGATGTTTGGAATGAGTGTCTCACTGAGAAAGAGAGGTTTAGTCTCTCGAGTTATCTACCTGATGTTGATCAGCTTACGTTTATGCGTACTTTGAAAGAGCTTTTCGAGGGTTGCAATTTCCACTTTGGTAGTCCTGTTAAGAAACTGTTTGATATGTTGAAGGGTGGGCAGTGTGAACCCAGGAATACGCTTTATCTTGAAGGACGTAGTTTGTTTCTACGAACCAAACATTATCATAGTTTGAGGAAGTATCATAATGACATGGTGGTGAATCTTTGTCAGACGAGGGATGCTTGGACAAGTTGTAAAGGGTATAGTATCGATGAGAAGCTCCGTGTCCTGAATATTGTGAAAAGCCAAAAGACTCTGATGCGTGAGAAAAAGGATGATTTTGAGGATGATTCATCAGAGAAGGACGAACCTTTTGATAAGCCTTGGGGAAGAAAGGGAAAGGATAGGAAGTCTACGCAAAAGAAATTGGCCCGTCATGCTGGTTATGGTGTTGATTCAGGTTTGGAATTTCCTAGGCGGCAGCTGGCGGCTGTAGAACAGGATTTATATGGTAAACCGAAGTCAAAACCGAAGTTTCCTTTTGCTAAAACGTCTGTTGGGCCATATGCTACAGGTTATAATGGGTATGGTATGAATTCTGCATACAACCCCTCTTCTCTCGTTAGGCAGAGGTATGGTTCAGAAGATAATATTGACGATGATGATCAGGATCCACTCTTTGGAATGGGTTCTCGACGAGACCGTGAGAAACCTGGATATTCAAGGCCTGGAAAGAAACACAAATCTTCAAGAGATGGAGAACCAATTTCTGAACATTTTATGGGTCCACCATATTCATCAAGGCAGTACCACAGCAATTACTCAAAATCGAGTAGATATGCTAATAATATTCAGCCTCACGCATTTGCCGACCAGATGAAGCCTGTAAAAGGTAGTCTAGCAGACCTTCGTGGTGACTTATATCGGCATGGGAAGAATCATGGAGATGGCTTTTCTGTTGATCCCAGATATATATCTGATGACTTGAATAGTAAAAGCAAAAAGTTGAAGTCTGAGAGGGACTCACCTGATACTAGTTTGAGATCTTATAGAGCTTCTATGCAACAAATGAACGAGAGGTTCTTAAATTCTGATTTTGGCGAGAACCATGTGCAGGAAAAGATTAGGGTGAATGTGGTACCCAATGCAAGGTCTGGTGTTGCGGCTTTCAGAGATAGCAGGATGTTCATGGGAAATGATGATACAGAGTCGGATTCATCCCATGGCTATGATGATGAGGAGGAGAGAAATCGCTTAATGCGGAACAAATCTTCTGTCTCAGTTGGTGGGATGAATAATTCTCATTTTCCAATACTCAAATCCAGACAAGATATTAAAAAGAGCAAATCCAGAAAGAAAGATATGCAGGAGAATGAATTGCTTGATGGACGGAGTGCGTACTTGAAATATTTAGGCGTATCTGGAGAACACATCTATGCGCCAGGGACAGAGAAGCACTCCTTCAAGTCAAAACAGAAGGGTAAGATGCGTGACAGGAGTCCCTTAGAGAACTTTTCCTCTCGAGATTTTGAAGATGGCCCGATCACAAGCTTGAGTGAGTTTCAGGACAGAAACAACAGGAAGGAGTTTTTCAGGTCAAACAGGAATAGCCAGACAAGAGAGCAAATGATTGATAGAACACTATTTCAGAGACCATCTGCAAAACCAAATTTGTCTGGGAGAAAAAGAGTCTTTGATGAAGATGACGAATCACATGAGATGAGAACATTGGTTAATGCCCGTGATAGACTTAGTAGGAAATATCAGGTTTCTGAGGATGATGGTAATAGTGGTGATGAAAATTTAGAGGCCAGGTTGTTTGTTTCTTGCAATGCTCTGTCGAAAAAGAGGAAGACTAGAGAGTCTTTGATGGACATGGAGAGGAGGGAGGATAATGGTGATCTGCAGCTATATCCCGACATTCAACTACCGGTTGGTGATGTAACTGTCTCGAAGAGAAAGGGAAAGAAGAAAATGGAGGTTGATGTTGGTTTTCTTGATCTGGAAACCTCTGACATACCGAAAGCAAGTGAAGCAGAGGTGGAAACCAAACCGCAGAAGAAGCCATTTGTGTTGATCACACCAACAGTTCACACTGGCTTCTCTTTCTCTATTGTACATCTTCTATCAGCAGTGCGTATGGCAATGACAAGTTTGCGTCCTGAAGATTCATTAGATGTTAGCAAATCTGTGGCAGTAGAGAATGCAGAACATGAAACTGGAGAAAATGGTGCCTCCGTGCCCGAGGAGGCAGAGGATAACAAGTCGCCACAGCAGGGAAATGGGAACTTGCCATCCCTTACTATCCAGGAAATTGTTAGCTGCGTGAAGTCAAACCCGGGAGATCCCTGTATCCTTGAGACACAAGAGCCGCTCCAGGATTTGATTAGAGGGGTTCTGAAAATCTTCTCTTCAAAAACCTCGCCTTTAGGGGCAAAGGGTTGGAAGCCACTTGTAACATTTGAGAGGTCCACGAAATGCTGGTCTTGGATTGGCCCTGTTCTCGGTCCTTCTGATCAGGAGACTGTCGAAGAGGTAACATCGCCTGAAGCCTGGAGTCTCCCGCACAAGATGCTTGTCAAGTTGGTTGATTCATTTGCAAATTGGCTGAAAACTGGCCAGGAAACTCTTCAGCAAATAGGAAGTCTTCCTGAACCACCGTTGTCACTCATGCAGTGTAACCTTGATGAGAAAGAAAGGTTTAAAGATCTGAGAGCACAAAAGAGCCTTAGTACGATTACCCAGAGTTCTGAAGAAGCAAGAGCCTATTTCCGCAAAGAGGAATTTCTGAGGTACTCAATTCCGGACAGAGCCTTTGTTTACACAGCTGCTGATGGTAAGAAGTCAATTGTTGCTCCTCTGAGAAGAGGCGGAGGAAAGCCAACCTCGAAAGCTCGTGACCATTTCATGTTGAAACGCGAGAGACCACCACATGTCACAATCCTGTGTCTAGTGAGAGATGCTGCCGCCAGATTGCCTGGTAGTATTGGGACAAGAGCTGATGTTTGTACCTTAATAAGAGACTCGCAGTATATCGTGGAGGATGTGTCTGATTCACAAGTGAATCAAGTCGTGAGTGGGGCCTTGGATCGTTTGCACTATGAGCGGGACCCTTGTGTCCAATTCGATTCAGAGAGGAAACTGTGGGTGTATCTACACAGAGACAGAGAACAAGAAGATTTCGAGGATGATGGTACTTCATCCACAAAGAAGTGGAAGAGACCAAAGAAGGAAGCTGCGGAGCAAACAGAGGAACAAGAAGCTGTCACTGTAGCTTTCCTTGGGAATGAAGAACAAACCGAAACTGAGATGGGTTCAGAACCAAAGACTGGTGAGCCCACTGGTTTGGACGGAGATCAAGGTGCAACAGACCAACTGTGTAATGAGACTGAACAAGCTGCAGAGGAGCAAGATGGTGAGAACACCGCTCAGGGTAATGAGCCAACGATATGGGAGCCTGATCCTGCTGTTGTTTCCAATCCGGTTGAGGATAACACGTTTATCTGCCAAGAGAACTCAGTGAATGATGATTTCGATGATGAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0002020 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0019899 GO:0031011 GO:0031974 GO:0031981 GO:0032991 GO:0033202 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0070013 GO:0070603 GO:0097346 GO:1902494 GO:1904949

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1298

Amino Acids

147.09

Weight (kDa)

5.37

Isoelectric Point (pI)

43.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_2nd_NFRKB	PF25793	1037 - 1175	3.6e-64	NFRKB second winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012193)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45830
fragaria_vesca	FvH4_3g34430 FvH4_3g34430
malus_domestica	MD03G1106200.v1.1 MD11G1118300.v1.1
prunus_persica	Prupe.6G088700_v2.0.a1
pyrus_communis	pycom03g08520 pycom11g09930
rosa_chinensis	RchiOBHm_Chr5g0062031
rosa_laevigata	RLG00000035527
rosa_multiflora	Rmu_sc0002296.1_g000008 Rmu_sc0017669.1_g000005
rosa_roxburghii	Rroxscaffold_1G00018660
rosa_rugosa	Rorug05G0345700
rosa_samantha	Rh5AG407000 Rh5BG420300 Rh5CG444400 Rh5DG435700
rosa_wichuraiana	Rw5G038350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	927
AasI	GACNNNNNNGTC	2 cut(s)	2209, 3464
Acc36I	ACCTGC	1 cut(s)	158
Acc65I	GGTACC	1 cut(s)	1486
AccB1I	GGYRCC	2 cut(s)	1486, 2579
AccB7I	CCANNNNNTGG	2 cut(s)	1028, 3677
AccBSI	CCGCTC	3 cut(s)	2722, 3454, 3776
AccI	GTMKAC	1 cut(s)	761
AccII	CGCG	1 cut(s)	3267
AccIII	TCCGGA	1 cut(s)	3151
AclWI	GGATC	6 cut(s)	1013, 1026, 1304, 2687, 3444, 3803
AcoI	YGGCCR	1 cut(s)	2965
AcsI	RAATTY	6 cut(s)	815, 943, 1435, 2017, 2149, 3131
AcuI	CTGAAG	4 cut(s)	2532, 2916, 2963, 3120
AfiI	CCNNNNNNNGG	8 cut(s)	1028, 1238, 1462, 1497, 2624, 2852, 3127, 3677
AflIII	ACRYGT	2 cut(s)	3280, 3843
AgeI	ACCGGT	1 cut(s)	2278
AhlI	ACTAGT	1 cut(s)	1382
AloI	GAACNNNNNNTCC	2 cut(s)	2627, 2659
Alw21I	GWGCWC	1 cut(s)	3067
AlwI	GGATC	6 cut(s)	1013, 1026, 1304, 2687, 3444, 3803
AlwNI	CAGNNNCTG	2 cut(s)	173, 3179
Ama87I	CYCGRG	4 cut(s)	343, 1869, 2591, 2686
Aor13HI	TCCGGA	1 cut(s)	3151
AoxI	GGCC	8 cut(s)	777, 908, 1073, 1885, 2157, 2842, 2965, 3429
ApeKI	GCWGC	7 cut(s)	829, 2254, 2670, 3176, 3311, 3584, 3746
ApoI	RAATTY	6 cut(s)	815, 943, 1435, 2017, 2149, 3131
AsiGI	ACCGGT	1 cut(s)	2278
Asp700I	GAANNNNTTC	3 cut(s)	1036, 2753, 2976
Asp718I	GGTACC	1 cut(s)	1486
AspA2I	CCTAGG	1 cut(s)	821
AspLEI	GCGC	1 cut(s)	1789
AspS9I	GGNCC	9 cut(s)	778, 908, 1133, 1886, 2817, 2843, 2855, 3429, 3457
AsuC2I	CCSGG	2 cut(s)	2687, 2688
AvaI	CYCGRG	4 cut(s)	343, 1869, 2591, 2686
AvaII	GGWCC	4 cut(s)	1133, 2817, 2855, 3457
AvrII	CCTAGG	1 cut(s)	821
BaeGI	GKGCMC	1 cut(s)	2592
BalI	TGGCCA	1 cut(s)	2967
BamHI	GGATCC	1 cut(s)	1018
BanI	GGYRCC	2 cut(s)	1486, 2579
BanII	GRGCYC	1 cut(s)	3687
BauI	CACGAG	1 cut(s)	3243
BbsI	GAAGAC	2 cut(s)	2207, 2987
Bbv12I	GWGCWC	1 cut(s)	3067
BbvI	GCAGC	7 cut(s)	841, 2266, 2657, 3163, 3298, 3571, 3733
BciVI	GTATCC	1 cut(s)	2711
BclI	TGATCA	4 cut(s)	364, 1012, 2424, 2863
BcnI	CCSGG	2 cut(s)	2687, 2688
BcuI	ACTAGT	1 cut(s)	1382
BfaI	CTAG	7 cut(s)	44, 273, 822, 1247, 1383, 2205, 3299
BfmI	CTRYAG	5 cut(s)	840, 918, 2252, 3618, 3747
BfuAI	ACCTGC	1 cut(s)	158
BfuI	GTATCC	1 cut(s)	2711
BglII	AGATCT	2 cut(s)	1391, 3055
BlnI	CCTAGG	1 cut(s)	821
BmcAI	AGTACT	1 cut(s)	50
Bme18I	GGWCC	4 cut(s)	1133, 2817, 2855, 3457
BmeT110I	CYCGRG	4 cut(s)	343, 1869, 2591, 2686
BmgT120I	GGNCC	9 cut(s)	778, 908, 1133, 1886, 2817, 2843, 2855, 3429, 3457
BmiI	GGNNCC	8 cut(s)	1020, 1134, 1488, 2581, 3430, 3458, 3459, 3804
BmsI	GCATC	5 cut(s)	577, 657, 1824, 2910, 3298
BoxI	GACNNNNGTC	1 cut(s)	1845
BpiI	GAAGAC	2 cut(s)	2207, 2987
BplI	GAGNNNNNCTC	4 cut(s)	1355, 1387, 1790, 1822
BpmI	CTGGAG	5 cut(s)	183, 1791, 2589, 2708, 2923
Bpu10I	CCTNAGC	1 cut(s)	3777
BpuEI	CTTGAG	2 cut(s)	1921, 2726
BpuMI	CCSGG	2 cut(s)	2687, 2688
Bsa29I	ATCGAT	1 cut(s)	618
BsaBI	GATNNNNATC	4 cut(s)	363, 1011, 1017, 1321
BsaI	GGTCTC	4 cut(s)	1041, 1993, 3265, 3562
BsaJI	CCNNGG	9 cut(s)	476, 731, 821, 1570, 1790, 2592, 2686, 3432, 3628
BsaWI	WCCGGW	3 cut(s)	2278, 3151, 3829
BsaXI	ACNNNNNCTCC	2 cut(s)	3380, 3410
Bsc4I	CCNNNNNNNGG	8 cut(s)	1028, 1238, 1462, 1497, 2624, 2852, 3127, 3677
Bse118I	RCCGGY	1 cut(s)	2278
Bse1I	ACTGG	6 cut(s)	211, 2449, 2572, 2968, 3682, 3694
Bse3DI	GCAATG	2 cut(s)	2185, 2499
Bse8I	GATNNNNATC	4 cut(s)	363, 1011, 1017, 1321
BseAI	TCCGGA	1 cut(s)	3151
BseCI	ATCGAT	1 cut(s)	618
BseDI	CCNNGG	9 cut(s)	476, 731, 821, 1570, 1790, 2592, 2686, 3432, 3628
BseJI	GATNNNNATC	4 cut(s)	363, 1011, 1017, 1321
BseLI	CCNNNNNNNGG	8 cut(s)	1028, 1238, 1462, 1497, 2624, 2852, 3127, 3677
BseMI	GCAATG	2 cut(s)	2185, 2499
BseNI	ACTGG	6 cut(s)	211, 2449, 2572, 2968, 3682, 3694
BseRI	GAGGAG	6 cut(s)	1601, 1604, 2245, 2609, 3195, 3767
BseSI	GKGCMC	1 cut(s)	2592
BseXI	GCAGC	7 cut(s)	841, 2266, 2657, 3163, 3298, 3571, 3733
BsgI	GTGCAG	1 cut(s)	1481
Bsh1236I	CGCG	1 cut(s)	3267
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	8 cut(s)	779, 910, 1075, 1887, 2159, 2844, 2967, 3431
BshNI	GGYRCC	2 cut(s)	1486, 2579
BshTI	ACCGGT	1 cut(s)	2278
BshVI	ATCGAT	1 cut(s)	618
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	1 cut(s)	3067
BsiHKCI	CYCGRG	4 cut(s)	343, 1869, 2591, 2686
BsiSI	CCGG	4 cut(s)	2279, 2687, 3152, 3830
BslFI	GGGAC	5 cut(s)	1382, 1807, 1833, 3352, 3470
BslI	CCNNNNNNNGG	8 cut(s)	1028, 1238, 1462, 1497, 2624, 2852, 3127, 3677
BsmFI	GGGAC	5 cut(s)	1382, 1807, 1833, 3352, 3470
BsmI	GAATGC	1 cut(s)	2557
BsnI	GGCC	8 cut(s)	779, 910, 1075, 1887, 2159, 2844, 2967, 3431
Bso31I	GGTCTC	4 cut(s)	1041, 1993, 3265, 3562
BsoBI	CYCGRG	4 cut(s)	343, 1869, 2591, 2686
Bsp1286I	GDGCHC	3 cut(s)	2592, 3067, 3687
Bsp13I	TCCGGA	1 cut(s)	3151
Bsp1407I	TGTACA	1 cut(s)	2464
Bsp19I	CCATGG	1 cut(s)	1570
BspANI	GGCC	8 cut(s)	779, 910, 1075, 1887, 2159, 2844, 2967, 3431
BspDI	ATCGAT	1 cut(s)	618
BspEI	TCCGGA	1 cut(s)	3151
BspFNI	CGCG	1 cut(s)	3267
BspLI	GGNNCC	8 cut(s)	1020, 1134, 1488, 2581, 3430, 3458, 3459, 3804
BspMAI	CTGCAG	2 cut(s)	2256, 3751
BspMI	ACCTGC	1 cut(s)	158
BspPI	GGATC	6 cut(s)	1013, 1026, 1304, 2687, 3444, 3803
BspT107I	GGYRCC	2 cut(s)	1486, 2579
BspTNI	GGTCTC	4 cut(s)	1041, 1993, 3265, 3562
BsrBI	CCGCTC	3 cut(s)	2722, 3454, 3776
BsrDI	GCAATG	2 cut(s)	2185, 2499
BsrFI	RCCGGY	1 cut(s)	2278
BsrGI	TGTACA	1 cut(s)	2464
BsrI	ACTGG	6 cut(s)	211, 2449, 2572, 2968, 3682, 3694
BssAI	RCCGGY	1 cut(s)	2278
BssECI	CCNNGG	9 cut(s)	476, 731, 821, 1570, 1790, 2592, 2686, 3432, 3628
BssSI	CACGAG	1 cut(s)	3243
BssT1I	CCWWGG	5 cut(s)	731, 821, 1570, 3432, 3628
Bst2BI	CACGAG	1 cut(s)	3243
Bst4CI	ACNGT	9 cut(s)	444, 1052, 2296, 2437, 2875, 3009, 3492, 3619, 3726
Bst6I	CTCTTC	8 cut(s)	8, 967, 2297, 2764, 2874, 2982, 3208, 3560
BstAPI	GCANNNNNTGC	1 cut(s)	2920
BstAUI	TGTACA	1 cut(s)	2464
BstC8I	GCNNGC	1 cut(s)	834
BstDSI	CCRYGG	1 cut(s)	1570
BstENI	CCTNNNNNAGG	1 cut(s)	1236
BstFNI	CGCG	1 cut(s)	3267
BstHHI	GCGC	1 cut(s)	1789
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	5 cut(s)	785, 2381, 2410, 2920, 3451
BstNSI	RCATGY	1 cut(s)	3284
BstPAI	GACNNNNGTC	1 cut(s)	1845
BstSFI	CTRYAG	5 cut(s)	840, 918, 2252, 3618, 3747
BstSLI	GKGCMC	1 cut(s)	2592
BstUI	CGCG	1 cut(s)	3267
BstV1I	GCAGC	7 cut(s)	841, 2266, 2657, 3163, 3298, 3571, 3733
BstV2I	GAAGAC	2 cut(s)	2207, 2987
BstX2I	RGATCY	4 cut(s)	1018, 1391, 2692, 3055
BstXI	CCANNNNNNTGG	2 cut(s)	3694, 3798
BstYI	RGATCY	4 cut(s)	1018, 1391, 2692, 3055
Bsu15I	ATCGAT	1 cut(s)	618
BsuI	GTATCC	1 cut(s)	2711
BsuRI	GGCC	8 cut(s)	779, 910, 1075, 1887, 2159, 2844, 2967, 3431
BsuTUI	ATCGAT	1 cut(s)	618
BtgI	CCRYGG	1 cut(s)	1570
BtgZI	GCGATG	1 cut(s)	2874
BtsI	GCAGTG	3 cut(s)	473, 2487, 3029
BtsIMutI	CAGTG	9 cut(s)	111, 318, 473, 2442, 2487, 3029, 3615, 3687, 3873
BveI	ACCTGC	1 cut(s)	158
Cac8I	GCNNGC	1 cut(s)	834
CaiI	CAGNNNCTG	2 cut(s)	173, 3179
CfoI	GCGC	1 cut(s)	1789
Cfr10I	RCCGGY	1 cut(s)	2278
Cfr13I	GGNCC	9 cut(s)	778, 908, 1133, 1886, 2817, 2843, 2855, 3429, 3457
Cfr9I	CCCGGG	1 cut(s)	2686
ClaI	ATCGAT	1 cut(s)	618
CseI	GACGC	1 cut(s)	2495
CspAI	ACCGGT	1 cut(s)	2278
DraI	TTTAAA	1 cut(s)	3052
DrdI	GACNNNNNNGTC	2 cut(s)	2209, 3464
DseDI	GACNNNNNNGTC	2 cut(s)	2209, 3464
EaeI	YGGCCR	1 cut(s)	2965
Eam1104I	CTCTTC	8 cut(s)	8, 967, 2297, 2764, 2874, 2982, 3208, 3560
EarI	CTCTTC	8 cut(s)	8, 967, 2297, 2764, 2874, 2982, 3208, 3560
EciI	GGCGGA	2 cut(s)	215, 3234
Eco130I	CCWWGG	5 cut(s)	731, 821, 1570, 3432, 3628
Eco147I	AGGCCT	1 cut(s)	1075
Eco24I	GRGCYC	1 cut(s)	3687
Eco31I	GGTCTC	4 cut(s)	1041, 1993, 3265, 3562
Eco47I	GGWCC	4 cut(s)	1133, 2817, 2855, 3457
Eco57I	CTGAAG	4 cut(s)	2532, 2916, 2963, 3120
Eco88I	CYCGRG	4 cut(s)	343, 1869, 2591, 2686
EcoNI	CCTNNNNNAGG	1 cut(s)	1236
EcoO109I	RGGNCCY	2 cut(s)	3429, 3457
EcoRI	GAATTC	1 cut(s)	943
EcoT14I	CCWWGG	5 cut(s)	731, 821, 1570, 3432, 3628
EcoT38I	GRGCYC	1 cut(s)	3687
ErhI	CCWWGG	5 cut(s)	731, 821, 1570, 3432, 3628
FalI	AAGNNNNNCTT	2 cut(s)	1793, 1825
FaqI	GGGAC	5 cut(s)	1382, 1807, 1833, 3352, 3470
FauI	CCCGC	2 cut(s)	2919, 3447
FauNDI	CATATG	1 cut(s)	913
FbaI	TGATCA	4 cut(s)	364, 1012, 2424, 2863
FblI	GTMKAC	1 cut(s)	761
FriOI	GRGCYC	1 cut(s)	3687
FspBI	CTAG	7 cut(s)	44, 273, 822, 1247, 1383, 2205, 3299
GlaI	GCGC	1 cut(s)	1788
GsuI	CTGGAG	5 cut(s)	183, 1791, 2589, 2708, 2923
HaeIII	GGCC	8 cut(s)	779, 910, 1075, 1887, 2159, 2844, 2967, 3431
HapII	CCGG	4 cut(s)	2279, 2687, 3152, 3830
HgaI	GACGC	1 cut(s)	2495
HhaI	GCGC	1 cut(s)	1789
Hin6I	GCGC	1 cut(s)	1787
HinP1I	GCGC	1 cut(s)	1787
HindIII	AAGCTT	1 cut(s)	1897
HpaII	CCGG	4 cut(s)	2279, 2687, 3152, 3830
Hpy166II	GTNNAC	7 cut(s)	473, 762, 863, 1136, 2440, 2820, 3169
Hpy8I	GTNNAC	7 cut(s)	473, 762, 863, 1136, 2440, 2820, 3169
Hpy99I	CGWCG	1 cut(s)	1047
HpyAV	CCTTC	9 cut(s)	451, 491, 703, 1265, 1819, 1819, 1924, 2868, 3571
HpyCH4III	ACNGT	9 cut(s)	444, 1052, 2296, 2437, 2875, 3009, 3492, 3619, 3726
HpyCH4IV	ACGT	6 cut(s)	21, 94, 374, 502, 899, 3845
HpyF10VI	GCNNNNNNNGC	5 cut(s)	785, 2381, 2410, 2920, 3451
HpySE526I	ACGT	6 cut(s)	21, 94, 374, 502, 899, 3845
HspAI	GCGC	1 cut(s)	1787
KflI	GGGWCCC	1 cut(s)	3457
Kpn2I	TCCGGA	1 cut(s)	3151
KpnI	GGTACC	1 cut(s)	1490
Ksp22I	TGATCA	4 cut(s)	364, 1012, 2424, 2863
LmnI	GCTCC	7 cut(s)	164, 633, 2727, 3208, 3589, 3754, 3802
Lsp1109I	GCAGC	7 cut(s)	841, 2266, 2657, 3163, 3298, 3571, 3733
LweI	GCATC	5 cut(s)	577, 657, 1824, 2910, 3298
MaeI	CTAG	7 cut(s)	44, 273, 822, 1247, 1383, 2205, 3299
MaeII	ACGT	6 cut(s)	21, 94, 374, 502, 899, 3845
MbiI	CCGCTC	3 cut(s)	2722, 3454, 3776
MfeI	CAATTG	1 cut(s)	3195
MflI	RGATCY	4 cut(s)	1018, 1391, 2692, 3055
MhlI	GDGCHC	3 cut(s)	2592, 3067, 3687
MlsI	TGGCCA	1 cut(s)	2967
MluNI	TGGCCA	1 cut(s)	2967
MlyI	GAGTC	8 cut(s)	655, 1364, 1565, 1855, 2046, 2219, 2914, 3365
MmeI	TCCRAC	2 cut(s)	1539, 2771
Mox20I	TGGCCA	1 cut(s)	2967
MroI	TCCGGA	1 cut(s)	3151
MroXI	GAANNNNTTC	3 cut(s)	1036, 2753, 2976
MscI	TGGCCA	1 cut(s)	2967
MseI	TTAA	7 cut(s)	435, 1433, 1604, 1683, 2082, 3051, 3362
MslI	CAYNNNNRTG	5 cut(s)	60, 563, 1293, 1575, 1782
Msp20I	TGGCCA	1 cut(s)	2967
MspA1I	CMGCKG	2 cut(s)	832, 3176
MspI	CCGG	4 cut(s)	2279, 2687, 3152, 3830
MunI	CAATTG	1 cut(s)	3195
Mva1269I	GAATGC	1 cut(s)	2557
MvnI	CGCG	1 cut(s)	3267
MwoI	GCNNNNNNNGC	5 cut(s)	785, 2381, 2410, 2920, 3451
NciI	CCSGG	2 cut(s)	2687, 2688
NcoI	CCATGG	1 cut(s)	1570
NdeI	CATATG	1 cut(s)	913
NlaIV	GGNNCC	8 cut(s)	1020, 1134, 1488, 2581, 3430, 3458, 3459, 3804
NmuCI	GTSAC	6 cut(s)	1262, 1838, 3012, 3245, 3283, 3613
NspI	RCATGY	1 cut(s)	3284
PaeR7I	CTCGAG	2 cut(s)	343, 1869
PceI	AGGCCT	1 cut(s)	1075
PciI	ACATGT	1 cut(s)	3280
PcsI	WCGNNNNNNNCGW	2 cut(s)	1048, 1215
PctI	GAATGC	1 cut(s)	2557
PdmI	GAANNNNTTC	3 cut(s)	1036, 2753, 2976
PflMI	CCANNNNNTGG	2 cut(s)	1028, 3677
PfoI	TCCNGGA	2 cut(s)	2655, 2724
PinAI	ACCGGT	1 cut(s)	2278
Ple19I	CGATCG	1 cut(s)	9
PleI	GAGTC	8 cut(s)	655, 1364, 1564, 1854, 2045, 2218, 2913, 3365
PpsI	GAGTC	8 cut(s)	655, 1364, 1564, 1854, 2045, 2218, 2913, 3365
PpuMI	RGGWCCY	1 cut(s)	3457
PscI	ACATGT	1 cut(s)	3280
PshAI	GACNNNNGTC	1 cut(s)	1845
PsiI	TTATAA	1 cut(s)	927
Psp5II	RGGWCCY	1 cut(s)	3457
PspN4I	GGNNCC	8 cut(s)	1020, 1134, 1488, 2581, 3430, 3458, 3459, 3804
PspPI	GGNCC	9 cut(s)	778, 908, 1133, 1886, 2817, 2843, 2855, 3429, 3457
PspPPI	RGGWCCY	1 cut(s)	3457
PstI	CTGCAG	2 cut(s)	2256, 3751
PstNI	CAGNNNCTG	2 cut(s)	173, 3179
PsuI	RGATCY	4 cut(s)	1018, 1391, 2692, 3055
PvuI	CGATCG	1 cut(s)	9
PvuII	CAGCTG	2 cut(s)	832, 3176
RseI	CAYNNNNRTG	5 cut(s)	60, 563, 1293, 1575, 1782
SaqAI	TTAA	7 cut(s)	435, 1433, 1604, 1683, 2082, 3051, 3362
Sau96I	GGNCC	9 cut(s)	778, 908, 1133, 1886, 2817, 2843, 2855, 3429, 3457
ScaI	AGTACT	1 cut(s)	50
SchI	GAGTC	8 cut(s)	655, 1364, 1565, 1855, 2046, 2219, 2914, 3365
SduI	GDGCHC	3 cut(s)	2592, 3067, 3687
SfaNI	GCATC	5 cut(s)	577, 657, 1824, 2910, 3298
SfcI	CTRYAG	5 cut(s)	840, 918, 2252, 3618, 3747
Sfr274I	CTCGAG	2 cut(s)	343, 1869
SinI	GGWCC	4 cut(s)	1133, 2817, 2855, 3457
SlaI	CTCGAG	2 cut(s)	343, 1869
SmaI	CCCGGG	1 cut(s)	2688
SmiMI	CAYNNNNRTG	5 cut(s)	60, 563, 1293, 1575, 1782
SmlI	CTYRAG	4 cut(s)	343, 1869, 1900, 2705
SmoI	CTYRAG	4 cut(s)	343, 1869, 1900, 2705
SpeI	ACTAGT	1 cut(s)	1382
SseBI	AGGCCT	1 cut(s)	1075
SspI	AATATT	4 cut(s)	643, 1000, 1198, 1757
SspMI	CTAG	7 cut(s)	44, 273, 822, 1247, 1383, 2205, 3299
StuI	AGGCCT	1 cut(s)	1075
StyI	CCWWGG	5 cut(s)	731, 821, 1570, 3432, 3628
TaaI	ACNGT	9 cut(s)	444, 1052, 2296, 2437, 2875, 3009, 3492, 3619, 3726
TaiI	ACGT	6 cut(s)	24, 97, 377, 505, 902, 3848
TaqII	GACCGA	1 cut(s)	2843
TatI	WGTACW	2 cut(s)	48, 2464
TauI	GCSGC	5 cut(s)	829, 839, 1514, 2722, 3317
Tru1I	TTAA	7 cut(s)	435, 1433, 1604, 1683, 2082, 3051, 3362
Tru9I	TTAA	7 cut(s)	435, 1433, 1604, 1683, 2082, 3051, 3362
TscAI	CASTG	9 cut(s)	111, 325, 473, 2449, 2487, 3029, 3622, 3694, 3873
TseFI	GTSAC	6 cut(s)	1262, 1838, 3012, 3245, 3283, 3613
TseI	GCWGC	7 cut(s)	829, 2254, 2670, 3176, 3311, 3584, 3746
Tsp45I	GTSAC	6 cut(s)	1262, 1838, 3012, 3245, 3283, 3613
TspGWI	ACGGA	4 cut(s)	620, 1753, 2575, 3714
TspMI	CCCGGG	1 cut(s)	2686
TspRI	CASTG	9 cut(s)	111, 325, 473, 2449, 2487, 3029, 3622, 3694, 3873
Van91I	CCANNNNNTGG	2 cut(s)	1028, 3677
VpaK11BI	GGWCC	4 cut(s)	1133, 2817, 2855, 3457
XagI	CCTNNNNNAGG	1 cut(s)	1236
XapI	RAATTY	6 cut(s)	815, 943, 1435, 2017, 2149, 3131
XbaI	TCTAGA	1 cut(s)	43
XceI	RCATGY	1 cut(s)	3284
XhoI	CTCGAG	2 cut(s)	343, 1869
XmaI	CCCGGG	1 cut(s)	2686
XmaJI	CCTAGG	1 cut(s)	821
XmiI	GTMKAC	1 cut(s)	761
XmnI	GAANNNNTTC	3 cut(s)	1036, 2753, 2976
XspI	CTAG	7 cut(s)	44, 273, 822, 1247, 1383, 2205, 3299
ZrmI	AGTACT	1 cut(s)	50

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.