tricarboxylic acid cycle
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47833 AT5G62575 AT5G62575 |
| fragaria_vesca | FvH4_5g16500 |
| malus_domestica | MD06G1180200.v1.1 MD14G1185300.v1.1 |
| prunus_persica | Prupe.5G178000_v2.0.a1 |
| pyrus_communis | pycom06g15950 pycom14g15420 |
| rosa_chinensis | RchiOBHm_Chr7g0179591 |
| rosa_multiflora | Rmu_sc0005329.1_g000023 |
| rosa_roxburghii | Rroxscaffold_155G00443900 Rroxscaffold_3G00273630 |
| rosa_rugosa | Rorug06G0426400 |
| rosa_samantha | Rh7DG026400 |
| rosa_wichuraiana | Rw7G002070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 87 |
| AciI | CCGC | 1 cut(s) | 87 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 58, 87 |
| AgsI | TTSAA | 2 cut(s) | 157, 187 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| AluBI | AGCT | 4 cut(s) | 74, 103, 122, 269 |
| AluI | AGCT | 4 cut(s) | 74, 103, 122, 269 |
| Alw21I | GWGCWC | 2 cut(s) | 112, 207 |
| ApeKI | GCWGC | 2 cut(s) | 231, 275 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| BauI | CACGAG | 1 cut(s) | 111 |
| BbsI | GAAGAC | 1 cut(s) | 62 |
| Bbv12I | GWGCWC | 2 cut(s) | 112, 207 |
| BbvCI | CCTCAGC | 1 cut(s) | 132 |
| BbvI | GCAGC | 2 cut(s) | 218, 262 |
| BccI | CCATC | 1 cut(s) | 56 |
| BfaI | CTAG | 1 cut(s) | 104 |
| BglII | AGATCT | 1 cut(s) | 240 |
| BisI | GCNGC | 2 cut(s) | 232, 276 |
| BlsI | GCNGC | 2 cut(s) | 233, 277 |
| BmiI | GGNNCC | 1 cut(s) | 92 |
| BmsI | GCATC | 3 cut(s) | 127, 149, 218 |
| BpiI | GAAGAC | 1 cut(s) | 62 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 189, 221 |
| Bpu10I | CCTNAGC | 2 cut(s) | 132, 270 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 58, 87 |
| BseGI | GGATG | 3 cut(s) | 67, 142, 233 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 58, 87 |
| BseMII | CTCAG | 1 cut(s) | 123 |
| BseRI | GAGGAG | 1 cut(s) | 163 |
| BseXI | GCAGC | 2 cut(s) | 218, 262 |
| Bsh1236I | CGCG | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 2 cut(s) | 112, 207 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 58, 87 |
| Bsp1286I | GDGCHC | 2 cut(s) | 112, 207 |
| Bsp143I | GATC | 2 cut(s) | 41, 240 |
| BspACI | CCGC | 1 cut(s) | 87 |
| BspCNI | CTCAG | 1 cut(s) | 124 |
| BspFNI | CGCG | 1 cut(s) | 87 |
| BspLI | GGNNCC | 1 cut(s) | 92 |
| BssMI | GATC | 2 cut(s) | 41, 240 |
| BssSI | CACGAG | 1 cut(s) | 111 |
| Bst2BI | CACGAG | 1 cut(s) | 111 |
| Bst4CI | ACNGT | 1 cut(s) | 211 |
| BstDEI | CTNAG | 2 cut(s) | 132, 270 |
| BstF5I | GGATG | 3 cut(s) | 67, 142, 233 |
| BstFNI | CGCG | 1 cut(s) | 87 |
| BstKTI | GATC | 2 cut(s) | 44, 243 |
| BstMBI | GATC | 2 cut(s) | 41, 240 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 128, 137, 275 |
| BstUI | CGCG | 1 cut(s) | 87 |
| BstV1I | GCAGC | 2 cut(s) | 218, 262 |
| BstV2I | GAAGAC | 1 cut(s) | 62 |
| BstX2I | RGATCY | 1 cut(s) | 240 |
| BstYI | RGATCY | 1 cut(s) | 240 |
| BtsCI | GGATG | 3 cut(s) | 67, 142, 233 |
| CviAII | CATG | 2 cut(s) | 95, 279 |
| CviJI | RGCY | 6 cut(s) | 74, 103, 122, 131, 269, 275 |
| CviKI_1 | RGCY | 6 cut(s) | 74, 103, 122, 131, 269, 275 |
| DdeI | CTNAG | 2 cut(s) | 132, 270 |
| DpnI | GATC | 2 cut(s) | 43, 242 |
| DpnII | GATC | 2 cut(s) | 41, 240 |
| EcoT22I | ATGCAT | 1 cut(s) | 142 |
| FaeI | CATG | 2 cut(s) | 98, 282 |
| FaiI | YATR | 6 cut(s) | 96, 165, 180, 237, 246, 280 |
| FatI | CATG | 2 cut(s) | 94, 278 |
| FauI | CCCGC | 1 cut(s) | 80 |
| Fnu4HI | GCNGC | 2 cut(s) | 232, 276 |
| FokI | GGATG | 3 cut(s) | 74, 149, 240 |
| Fsp4HI | GCNGC | 2 cut(s) | 232, 276 |
| FspBI | CTAG | 1 cut(s) | 104 |
| GluI | GCNGC | 2 cut(s) | 232, 276 |
| Hin1II | CATG | 2 cut(s) | 98, 282 |
| HinfI | GANTC | 1 cut(s) | 153 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy188I | TCNGA | 1 cut(s) | 41 |
| Hpy188III | TCNNGA | 1 cut(s) | 113 |
| Hpy99I | CGWCG | 1 cut(s) | 87 |
| HpyCH4III | ACNGT | 1 cut(s) | 211 |
| HpyCH4V | TGCA | 2 cut(s) | 140, 278 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 128, 137, 275 |
| HpyF3I | CTNAG | 2 cut(s) | 132, 270 |
| Hsp92II | CATG | 2 cut(s) | 98, 282 |
| Kzo9I | GATC | 2 cut(s) | 41, 240 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 3 cut(s) | 65, 210, 257 |
| Lsp1109I | GCAGC | 2 cut(s) | 218, 262 |
| LweI | GCATC | 3 cut(s) | 127, 149, 218 |
| MaeI | CTAG | 1 cut(s) | 104 |
| MalI | GATC | 2 cut(s) | 43, 242 |
| MboI | GATC | 2 cut(s) | 41, 240 |
| MboII | GAAGA | 3 cut(s) | 36, 39, 67 |
| MflI | RGATCY | 1 cut(s) | 240 |
| MhlI | GDGCHC | 2 cut(s) | 112, 207 |
| MluCI | AATT | 1 cut(s) | 192 |
| MnlI | CCTC | 4 cut(s) | 31, 47, 127, 141 |
| Mph1103I | ATGCAT | 1 cut(s) | 142 |
| MvnI | CGCG | 1 cut(s) | 87 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 128, 137, 275 |
| NdeII | GATC | 2 cut(s) | 41, 240 |
| NlaIII | CATG | 2 cut(s) | 98, 282 |
| NlaIV | GGNNCC | 1 cut(s) | 92 |
| NsiI | ATGCAT | 1 cut(s) | 142 |
| PfeI | GAWTC | 1 cut(s) | 153 |
| PkrI | GCNGC | 2 cut(s) | 233, 277 |
| PspN4I | GGNNCC | 1 cut(s) | 92 |
| PsuI | RGATCY | 1 cut(s) | 240 |
| SatI | GCNGC | 2 cut(s) | 232, 276 |
| Sau3AI | GATC | 2 cut(s) | 41, 240 |
| SduI | GDGCHC | 2 cut(s) | 112, 207 |
| SetI | ASST | 8 cut(s) | 23, 39, 76, 105, 109, 124, 175, 271 |
| SfaNI | GCATC | 3 cut(s) | 127, 149, 218 |
| Sse9I | AATT | 1 cut(s) | 192 |
| SsiI | CCGC | 1 cut(s) | 87 |
| SspMI | CTAG | 1 cut(s) | 104 |
| TaaI | ACNGT | 1 cut(s) | 211 |
| TaqI | TCGA | 1 cut(s) | 23 |
| TasI | AATT | 1 cut(s) | 192 |
| TfiI | GAWTC | 1 cut(s) | 153 |
| TseI | GCWGC | 2 cut(s) | 231, 275 |
| TspDTI | ATGAA | 2 cut(s) | 18, 167 |
| TspGWI | ACGGA | 1 cut(s) | 74 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 59 |
| XspI | CTAG | 1 cut(s) | 104 |
| Zsp2I | ATGCAT | 1 cut(s) | 142 |