tricarboxylic acid cycle
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47833 AT5G62575 AT5G62575 |
| fragaria_vesca | FvH4_5g16500 |
| malus_domestica | MD06G1180200.v1.1 MD14G1185300.v1.1 |
| prunus_persica | Prupe.5G178000_v2.0.a1 |
| pyrus_communis | pycom06g15950 pycom14g15420 |
| rosa_chinensis | RchiOBHm_Chr7g0179591 |
| rosa_multiflora | Rmu_sc0005329.1_g000023 |
| rosa_roxburghii | Rroxscaffold_155G00443900 Rroxscaffold_3G00273630 |
| rosa_rugosa | Rorug06G0426400 |
| rosa_samantha | Rh7DG026400 |
| rosa_wichuraiana | Rw7G002070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 85 |
| AcuI | CTGAAG | 2 cut(s) | 156, 209 |
| AgsI | TTSAA | 3 cut(s) | 27, 151, 160 |
| AjnI | CCWGG | 1 cut(s) | 106 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 113, 145 |
| AluBI | AGCT | 4 cut(s) | 125, 257, 275, 294 |
| AluI | AGCT | 4 cut(s) | 125, 257, 275, 294 |
| Alw21I | GWGCWC | 2 cut(s) | 183, 210 |
| Alw26I | GTCTC | 1 cut(s) | 168 |
| Alw44I | GTGCAC | 1 cut(s) | 179 |
| Ama87I | CYCGRG | 1 cut(s) | 114 |
| ApaLI | GTGCAC | 1 cut(s) | 179 |
| ApeKI | GCWGC | 1 cut(s) | 281 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 155 |
| AsuHPI | GGTGA | 2 cut(s) | 77, 212 |
| AvaI | CYCGRG | 1 cut(s) | 114 |
| BaeGI | GKGCMC | 1 cut(s) | 183 |
| BbsI | GAAGAC | 1 cut(s) | 42 |
| Bbv12I | GWGCWC | 2 cut(s) | 183, 210 |
| BbvI | GCAGC | 1 cut(s) | 268 |
| BciT130I | CCWGG | 1 cut(s) | 108 |
| BcoDI | GTCTC | 1 cut(s) | 168 |
| BfmI | CTRYAG | 1 cut(s) | 282 |
| BisI | GCNGC | 1 cut(s) | 282 |
| BlsI | GCNGC | 1 cut(s) | 283 |
| Bme1390I | CCNGG | 1 cut(s) | 108 |
| BmeT110I | CYCGRG | 1 cut(s) | 114 |
| BmrFI | CCNGG | 1 cut(s) | 108 |
| BmsI | GCATC | 1 cut(s) | 58 |
| BpiI | GAAGAC | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 108 |
| BseGI | GGATG | 1 cut(s) | 236 |
| BseSI | GKGCMC | 1 cut(s) | 183 |
| BseXI | GCAGC | 1 cut(s) | 268 |
| Bsh1236I | CGCG | 1 cut(s) | 85 |
| BsiHKAI | GWGCWC | 2 cut(s) | 183, 210 |
| BsiHKCI | CYCGRG | 1 cut(s) | 114 |
| BsmAI | GTCTC | 1 cut(s) | 168 |
| BsoBI | CYCGRG | 1 cut(s) | 114 |
| Bsp1286I | GDGCHC | 2 cut(s) | 183, 210 |
| BspFNI | CGCG | 1 cut(s) | 85 |
| BspHI | TCATGA | 1 cut(s) | 296 |
| BspMAI | CTGCAG | 1 cut(s) | 286 |
| Bst2UI | CCWGG | 1 cut(s) | 108 |
| Bst4CI | ACNGT | 1 cut(s) | 214 |
| Bst6I | CTCTTC | 2 cut(s) | 146, 185 |
| BstF5I | GGATG | 1 cut(s) | 236 |
| BstFNI | CGCG | 1 cut(s) | 85 |
| BstMAI | GTCTC | 1 cut(s) | 168 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 131, 281 |
| BstNI | CCWGG | 1 cut(s) | 108 |
| BstSCI | CCNGG | 1 cut(s) | 106 |
| BstSFI | CTRYAG | 1 cut(s) | 282 |
| BstSLI | GKGCMC | 1 cut(s) | 183 |
| BstUI | CGCG | 1 cut(s) | 85 |
| BstV1I | GCAGC | 1 cut(s) | 268 |
| BstV2I | GAAGAC | 1 cut(s) | 42 |
| BtsCI | GGATG | 1 cut(s) | 236 |
| BtsIMutI | CAGTG | 1 cut(s) | 210 |
| CciI | TCATGA | 1 cut(s) | 296 |
| CseI | GACGC | 1 cut(s) | 74 |
| CviAII | CATG | 1 cut(s) | 297 |
| CviJI | RGCY | 7 cut(s) | 106, 125, 134, 257, 275, 281, 294 |
| CviKI_1 | RGCY | 7 cut(s) | 106, 125, 134, 257, 275, 281, 294 |
| Eam1104I | CTCTTC | 2 cut(s) | 146, 185 |
| EarI | CTCTTC | 2 cut(s) | 146, 185 |
| Eco57I | CTGAAG | 2 cut(s) | 156, 209 |
| Eco88I | CYCGRG | 1 cut(s) | 114 |
| EcoRII | CCWGG | 1 cut(s) | 106 |
| FaeI | CATG | 1 cut(s) | 300 |
| FaiI | YATR | 4 cut(s) | 168, 240, 249, 298 |
| FatI | CATG | 1 cut(s) | 296 |
| Fnu4HI | GCNGC | 1 cut(s) | 282 |
| FokI | GGATG | 1 cut(s) | 243 |
| Fsp4HI | GCNGC | 1 cut(s) | 282 |
| GluI | GCNGC | 1 cut(s) | 282 |
| HgaI | GACGC | 1 cut(s) | 74 |
| Hin1II | CATG | 1 cut(s) | 300 |
| HinfI | GANTC | 3 cut(s) | 93, 140, 156 |
| HphI | GGTGA | 2 cut(s) | 77, 212 |
| Hpy166II | GTNNAC | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 2 cut(s) | 116, 297 |
| Hpy8I | GTNNAC | 1 cut(s) | 181 |
| Hpy99I | CGWCG | 1 cut(s) | 90 |
| HpyCH4III | ACNGT | 1 cut(s) | 214 |
| HpyCH4V | TGCA | 3 cut(s) | 181, 227, 284 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 131, 281 |
| Hsp92II | CATG | 1 cut(s) | 300 |
| LpnPI | CCDG | 5 cut(s) | 93, 120, 213, 263, 270 |
| Lsp1109I | GCAGC | 1 cut(s) | 268 |
| LweI | GCATC | 1 cut(s) | 58 |
| MboII | GAAGA | 5 cut(s) | 42, 45, 149, 163, 202 |
| MhlI | GDGCHC | 2 cut(s) | 183, 210 |
| MluCI | AATT | 1 cut(s) | 27 |
| MnlI | CCTC | 1 cut(s) | 186 |
| MroXI | GAANNNNTTC | 1 cut(s) | 155 |
| MspR9I | CCNGG | 1 cut(s) | 108 |
| MvaI | CCWGG | 1 cut(s) | 108 |
| MvnI | CGCG | 1 cut(s) | 85 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 131, 281 |
| NlaIII | CATG | 1 cut(s) | 300 |
| PaeR7I | CTCGAG | 1 cut(s) | 114 |
| PagI | TCATGA | 1 cut(s) | 296 |
| PdmI | GAANNNNTTC | 1 cut(s) | 155 |
| PfeI | GAWTC | 3 cut(s) | 93, 140, 156 |
| PkrI | GCNGC | 1 cut(s) | 283 |
| Psp6I | CCWGG | 1 cut(s) | 106 |
| PspGI | CCWGG | 1 cut(s) | 106 |
| PstI | CTGCAG | 1 cut(s) | 286 |
| SatI | GCNGC | 1 cut(s) | 282 |
| ScrFI | CCNGG | 1 cut(s) | 108 |
| SduI | GDGCHC | 2 cut(s) | 183, 210 |
| SetI | ASST | 4 cut(s) | 127, 259, 277, 296 |
| SfaNI | GCATC | 1 cut(s) | 58 |
| SfcI | CTRYAG | 1 cut(s) | 282 |
| Sfr274I | CTCGAG | 1 cut(s) | 114 |
| SlaI | CTCGAG | 1 cut(s) | 114 |
| SmlI | CTYRAG | 1 cut(s) | 114 |
| SmoI | CTYRAG | 1 cut(s) | 114 |
| Sse9I | AATT | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 106 |
| TaaI | ACNGT | 1 cut(s) | 214 |
| TaqI | TCGA | 1 cut(s) | 115 |
| TasI | AATT | 1 cut(s) | 27 |
| TfiI | GAWTC | 3 cut(s) | 93, 140, 156 |
| TscAI | CASTG | 1 cut(s) | 217 |
| TseI | GCWGC | 1 cut(s) | 281 |
| TspDTI | ATGAA | 3 cut(s) | 21, 255, 278 |
| TspRI | CASTG | 1 cut(s) | 217 |
| VneI | GTGCAC | 1 cut(s) | 179 |
| XhoI | CTCGAG | 1 cut(s) | 114 |
| XmnI | GAANNNNTTC | 1 cut(s) | 155 |