zpr3 zpr3 (little zipper 3)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52770 |
| fragaria_vesca | FvH4_6g18440 FvH4_6g18440 FvH4_6g18440 FvH4_6g18440 |
| malus_domestica | MD12G1023500.v1.1 MD14G1020700.v1.1 |
| prunus_persica | Prupe.2G079600_v2.0.a1 Prupe.7G113000_v2.0.a1 |
| pyrus_communis | pycom12g02190 pycom14g02020 |
| rosa_chinensis | RchiOBHm_Chr3g0472971 |
| rosa_laevigata | RLG00000024041 |
| rosa_multiflora | Rmu_sc0002332.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00408440 |
| rosa_rugosa | Rorug03G0130200 |
| rosa_samantha | Rh3BG208400 Rh3DG167600 |
| rosa_wichuraiana | Rw3G016110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 166 |
| AgsI | TTSAA | 2 cut(s) | 32, 116 |
| AluBI | AGCT | 5 cut(s) | 22, 77, 82, 106, 183 |
| AluI | AGCT | 5 cut(s) | 22, 77, 82, 106, 183 |
| Alw26I | GTCTC | 1 cut(s) | 55 |
| AlwI | GGATC | 1 cut(s) | 166 |
| BcoDI | GTCTC | 1 cut(s) | 55 |
| BlpI | GCTNAGC | 1 cut(s) | 78 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 78 |
| BseMII | CTCAG | 1 cut(s) | 69 |
| BsmAI | GTCTC | 1 cut(s) | 55 |
| Bsp143I | GATC | 1 cut(s) | 158 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 78 |
| BspCNI | CTCAG | 1 cut(s) | 70 |
| BspPI | GGATC | 1 cut(s) | 166 |
| BssMI | GATC | 1 cut(s) | 158 |
| Bst4CI | ACNGT | 1 cut(s) | 38 |
| BstDEI | CTNAG | 3 cut(s) | 65, 78, 141 |
| BstKTI | GATC | 1 cut(s) | 161 |
| BstMAI | GTCTC | 1 cut(s) | 55 |
| BstMBI | GATC | 1 cut(s) | 158 |
| CviJI | RGCY | 6 cut(s) | 10, 22, 77, 82, 106, 183 |
| CviKI_1 | RGCY | 6 cut(s) | 10, 22, 77, 82, 106, 183 |
| DdeI | CTNAG | 3 cut(s) | 65, 78, 141 |
| DpnI | GATC | 1 cut(s) | 160 |
| DpnII | GATC | 1 cut(s) | 158 |
| FaiI | YATR | 1 cut(s) | 44 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 66, 98, 172, 204 |
| FspEI | CC | 5 cut(s) | 52, 113, 141, 148, 177 |
| HinfI | GANTC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 1 cut(s) | 87 |
| Hpy188III | TCNNGA | 3 cut(s) | 92, 192, 201 |
| HpyCH4III | ACNGT | 1 cut(s) | 38 |
| HpyF3I | CTNAG | 3 cut(s) | 65, 78, 141 |
| Kzo9I | GATC | 1 cut(s) | 158 |
| LpnPI | CCDG | 1 cut(s) | 177 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MalI | GATC | 1 cut(s) | 160 |
| MboI | GATC | 1 cut(s) | 158 |
| MboII | GAAGA | 1 cut(s) | 82 |
| NdeII | GATC | 1 cut(s) | 158 |
| PfeI | GAWTC | 1 cut(s) | 88 |
| Sau3AI | GATC | 1 cut(s) | 158 |
| SetI | ASST | 5 cut(s) | 24, 79, 84, 108, 185 |
| SgeI | CNNG | 4 cut(s) | 28, 70, 104, 192 |
| TaaI | ACNGT | 1 cut(s) | 38 |
| TaqI | TCGA | 1 cut(s) | 17 |
| TfiI | GAWTC | 1 cut(s) | 88 |
| TspDTI | ATGAA | 1 cut(s) | 62 |