zpr3 zpr3 (little zipper 3)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52770 |
| fragaria_vesca | FvH4_6g18440 FvH4_6g18440 FvH4_6g18440 FvH4_6g18440 |
| malus_domestica | MD12G1023500.v1.1 MD14G1020700.v1.1 |
| prunus_persica | Prupe.2G079600_v2.0.a1 Prupe.7G113000_v2.0.a1 |
| pyrus_communis | pycom12g02190 pycom14g02020 |
| rosa_chinensis | RchiOBHm_Chr3g0472971 |
| rosa_laevigata | RLG00000024041 |
| rosa_multiflora | Rmu_sc0002332.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00408440 |
| rosa_rugosa | Rorug03G0130200 |
| rosa_samantha | Rh3BG208400 Rh3DG167600 |
| rosa_wichuraiana | Rw3G016110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 140 |
| AfaI | GTAC | 1 cut(s) | 26 |
| AjnI | CCWGG | 1 cut(s) | 90 |
| AluBI | AGCT | 6 cut(s) | 22, 104, 118, 130, 195, 201 |
| AluI | AGCT | 6 cut(s) | 22, 104, 118, 130, 195, 201 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 130 |
| ApeKI | GCWGC | 2 cut(s) | 158, 161 |
| BbvCI | CCTCAGC | 1 cut(s) | 65 |
| BbvI | GCAGC | 2 cut(s) | 170, 173 |
| BciT130I | CCWGG | 1 cut(s) | 92 |
| BfaI | CTAG | 1 cut(s) | 219 |
| BisI | GCNGC | 2 cut(s) | 159, 162 |
| BlsI | GCNGC | 2 cut(s) | 160, 163 |
| Bme1390I | CCNGG | 1 cut(s) | 92 |
| BmrFI | CCNGG | 1 cut(s) | 92 |
| BpmI | CTGGAG | 1 cut(s) | 181 |
| Bpu10I | CCTNAGC | 1 cut(s) | 65 |
| Bse3DI | GCAATG | 1 cut(s) | 160 |
| BseBI | CCWGG | 1 cut(s) | 92 |
| BseMI | GCAATG | 1 cut(s) | 160 |
| BseMII | CTCAG | 3 cut(s) | 56, 105, 205 |
| BseXI | GCAGC | 2 cut(s) | 170, 173 |
| BspCNI | CTCAG | 3 cut(s) | 57, 106, 204 |
| BsrDI | GCAATG | 1 cut(s) | 160 |
| Bst2UI | CCWGG | 1 cut(s) | 92 |
| BstDEI | CTNAG | 3 cut(s) | 65, 114, 191 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 28, 115 |
| BstNI | CCWGG | 1 cut(s) | 92 |
| BstSCI | CCNGG | 1 cut(s) | 90 |
| BstV1I | GCAGC | 2 cut(s) | 170, 173 |
| CaiI | CAGNNNCTG | 1 cut(s) | 130 |
| Csp6I | GTAC | 1 cut(s) | 25 |
| CviJI | RGCY | 8 cut(s) | 10, 22, 64, 104, 118, 130, 195, 201 |
| CviKI_1 | RGCY | 8 cut(s) | 10, 22, 64, 104, 118, 130, 195, 201 |
| CviQI | GTAC | 1 cut(s) | 25 |
| DdeI | CTNAG | 3 cut(s) | 65, 114, 191 |
| Eco57I | CTGAAG | 1 cut(s) | 140 |
| EcoRII | CCWGG | 1 cut(s) | 90 |
| FaiI | YATR | 1 cut(s) | 44 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 11, 43, 66, 98, 93, 125 |
| Fnu4HI | GCNGC | 2 cut(s) | 159, 162 |
| Fsp4HI | GCNGC | 2 cut(s) | 159, 162 |
| FspBI | CTAG | 1 cut(s) | 219 |
| GluI | GCNGC | 2 cut(s) | 159, 162 |
| GsuI | CTGGAG | 1 cut(s) | 181 |
| HinfI | GANTC | 1 cut(s) | 97 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy188III | TCNNGA | 1 cut(s) | 179 |
| HpyAV | CCTTC | 1 cut(s) | 225 |
| HpyCH4V | TGCA | 2 cut(s) | 31, 158 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 28, 115 |
| HpyF3I | CTNAG | 3 cut(s) | 65, 114, 191 |
| LmnI | GCTCC | 2 cut(s) | 200, 206 |
| LpnPI | CCDG | 4 cut(s) | 77, 104, 192, 211 |
| Lsp1109I | GCAGC | 2 cut(s) | 170, 173 |
| MaeI | CTAG | 1 cut(s) | 219 |
| MboII | GAAGA | 1 cut(s) | 82 |
| MnlI | CCTC | 3 cut(s) | 54, 60, 194 |
| MspR9I | CCNGG | 1 cut(s) | 92 |
| MvaI | CCWGG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 28, 115 |
| PfeI | GAWTC | 1 cut(s) | 97 |
| PkrI | GCNGC | 2 cut(s) | 160, 163 |
| Psp6I | CCWGG | 1 cut(s) | 90 |
| PspGI | CCWGG | 1 cut(s) | 90 |
| PstNI | CAGNNNCTG | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 26 |
| RsaNI | GTAC | 1 cut(s) | 25 |
| SatI | GCNGC | 2 cut(s) | 159, 162 |
| ScrFI | CCNGG | 1 cut(s) | 92 |
| SetI | ASST | 7 cut(s) | 24, 106, 120, 132, 186, 197, 203 |
| SgeI | CNNG | 7 cut(s) | 40, 103, 104, 113, 148, 191, 210 |
| SspI | AATATT | 1 cut(s) | 175 |
| SspMI | CTAG | 1 cut(s) | 219 |
| StyD4I | CCNGG | 1 cut(s) | 90 |
| TatI | WGTACW | 1 cut(s) | 24 |
| TfiI | GAWTC | 1 cut(s) | 97 |
| TseI | GCWGC | 2 cut(s) | 158, 161 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| XspI | CTAG | 1 cut(s) | 219 |