Rorug03G0130200

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
10546777 .. 10550909
4133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0130200.1

Sequence Viewer

Length: 1776 bp
ATGGAAGAGAGAAAGGGATCAGCAAAATCGAACAAGGTGGCAGCTGAAAATCAGGAGAAATGGGTTTATGATTCTTCTGTGGATCATAAAGGAAATGTTCCTCTCCGAGCTTCAACTGGTGTTTGGAAAGCCTCTCTCTTTATTGTTGCAATTGAGTTCAGTGAGAGGCTGAGTTACTTTGGAATAGCAACCAGTTTAATTATTTACCTGACCAAAGTAATTCATGAAGACCTCAAGAGTGCAGCAAAGAGTGTCAACTATTGGTCTGGTGTTACCACATTGATTCCATTCTTTGGAGGCTTCATAGCTGATGCTTATTTGGGTCGCTTCTCAACTGTTCTGGTCTCATCCATCATTTACCTTCTGGGTTTGATTCTTCTATCCATGTCCTGGTTTGTACCAACCCTAAAGCCTTGTGACACACATCCATGTCTTGAACCAAGAAAAATCCATGAAGTGGTGTTCTTCCTAGCCATATACATGATCTCCATAGGAACTGGAGGCCATAAACCCTCTTTGGAGAGCTTTGGAGCTGACCAATTTGATGATGATCACACTGAAGAAAGAAAGCAAAAGATGTCCTACTTCAATTGGTGGAACTTTGGGCTTTGCTGTGGTCTTTTGTTTGGGGTGACTGTGGTTGTCTATGTACAAGACCATGTAAGTTGGGGTGCCGCAGATATAGTTCTCATGGCAGTCATGGGTACCTCGCTGGTTATCTTCATTGTTGGGAGGCCGTTTTACCGCTATCGAAGACCTACAGGGAGCCCCCTGACACCAATGCTGCAGGTTCTTGTAGCAGCCATTGCGAAGAGAAAGCTGCCATATCCTTCTGATCCTGCTCAATTGTATGAAATTTCCCAGTCGGAGAAGGTCCGTGGGAGGCTTTTGTGCCACACCAACAAGCTCAAATTTCTTGACAAGGCAGCCATCATAAGCACAGAAAATTCAGCTGAGAAGCAAAATCCTTGGACTCTTGCAACAGTGACAAAGGTCGAGGAGATGAAACTAGTCCTCAACATTATCCCCATTTGGCTAGCCACCCTACCATTTGGAATGTGTGTAGCACAAGCCTCTACATTCTTCATCAAACAAGGTGTCTCCATGAACCGAAGCATCGCCAACGGTTTCGAGATCCCCCCTGCCTCAATCTACTCTCTCGCAGCCATCGGAATGATCATATCCGTCACGGTCTACGAGAAAATCCTAGTCCCCGTCATGCGAAGAACAACTGGAAACGAGAGGGGAATCAACATCCTCCAGAGAATCGGAATTGGAATGCTCTTCTTAATCGGCACAATGGTAGCAGCTGCCTTGGTGGAGAAGAAAAGACTAGGGATTGTTGAGAAAGACCCTTTAAAGAGCTCACATTCCATGAGTGTGTTCTGGTTAGCACCCCAGTTTGTGATAATTGGATTTGGAGATGGGTTTACTCTTGTAGGTCTGCAGGAGTATTTCTACGACCAAGTCCCGGACTCCATGAGGAGCTTGGGAATTGCGTTTTACCTTGGTGTAATTGGAGCTGGAAATTTTCTCAGTAGCCTCTTGATCACGGCCATTGATCACATCACAGAGAAAAGGGGGAAGAGTTGGTTTGGTAAGGATTTGAATAGTAGTCGTTTGGACAAGTTTTACTGGCTATTGGCTTGTATGGCTGCAGCAAATTTGTGTGTTTATGTGTTTTTGGCTCGGCGTTACTCTTACAAGAATGTGCAGAAGGTAGCTGTGGTCGACTGCTATGAAGGTGAACAGGAAAAGGGAGGTTCATTGGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

591

Amino Acids

65.8

Weight (kDa)

9.01

Isoelectric Point (pI)

38.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 59 - 513 3.1e-10 Major Facilitator Superfamily
PTR2 PF00854 110 - 527 2.4e-88 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 778
Acc65I GGTACC 1 cut(s) 704
AccB1I GGYRCC 2 cut(s) 671, 704
AccB7I CCANNNNNTGG 3 cut(s) 293, 390, 457
AccI GTMKAC 2 cut(s) 1194, 1731
AciI CCGC 2 cut(s) 675, 745
AclWI GGATC 4 cut(s) 25, 90, 830, 1129
AcoI YGGCCR 1 cut(s) 1554
AcsI RAATTY 5 cut(s) 855, 911, 946, 1528, 1663
AcuI CTGAAG 1 cut(s) 579
AfaI GTAC 3 cut(s) 399, 651, 706
AfiI CCNNNNNNNGG 4 cut(s) 293, 390, 457, 1471
AgsI TTSAA 4 cut(s) 114, 437, 589, 1609
AhlI ACTAGT 1 cut(s) 1009
AjnI CCWGG 1 cut(s) 389
Alw21I GWGCWC 1 cut(s) 1367
Alw26I GTCTC 2 cut(s) 349, 1105
AlwI GGATC 4 cut(s) 25, 90, 830, 1129
AoxI GGCC 3 cut(s) 502, 734, 1554
ApoI RAATTY 5 cut(s) 855, 911, 946, 1528, 1663
ArsI GACNNNNNNTTYG 2 cut(s) 1083, 1115
Asp718I GGTACC 1 cut(s) 704
AspS9I GGNCC 1 cut(s) 874
AsuC2I CCSGG 1 cut(s) 1472
AsuHPI GGTGA 2 cut(s) 643, 1757
AsuNHI GCTAGC 1 cut(s) 1036
AvaII GGWCC 1 cut(s) 874
BanI GGYRCC 2 cut(s) 671, 704
BanII GRGCYC 2 cut(s) 770, 1367
BbsI GAAGAC 2 cut(s) 234, 760
Bbv12I GWGCWC 1 cut(s) 1367
BccI CCATC 4 cut(s) 359, 938, 1175, 1418
BceAI ACGGC 2 cut(s) 721, 1569
BciT130I CCWGG 1 cut(s) 391
BclI TGATCA 4 cut(s) 550, 1176, 1548, 1561
BcnI CCSGG 1 cut(s) 1472
BcoDI GTCTC 2 cut(s) 349, 1105
BcuI ACTAGT 1 cut(s) 1009
BfaI CTAG 5 cut(s) 470, 1010, 1037, 1208, 1334
BfmI CTRYAG 4 cut(s) 759, 785, 1445, 1656
BfuAI ACCTGC 1 cut(s) 778
Bme1390I CCNGG 2 cut(s) 391, 1472
Bme18I GGWCC 1 cut(s) 874
BmgT120I GGNCC 1 cut(s) 874
BmiI GGNNCC 3 cut(s) 673, 706, 767
BmrFI CCNGG 2 cut(s) 391, 1472
BmrI ACTGGG 2 cut(s) 856, 1393
BmsI GCATC 2 cut(s) 301, 1125
BmtI GCTAGC 1 cut(s) 1040
BmuI ACTGGG 2 cut(s) 856, 1393
BoxI GACNNNNGTC 1 cut(s) 992
BpiI GAAGAC 2 cut(s) 234, 760
BpmI CTGGAG 2 cut(s) 519, 1244
BpuEI CTTGAG 1 cut(s) 218
BpuMI CCSGG 1 cut(s) 1472
BsaBI GATNNNNATC 1 cut(s) 549
BsaI GGTCTC 1 cut(s) 349
BsaJI CCNNGG 4 cut(s) 877, 968, 1314, 1507
BsaXI ACNNNNNCTCC 2 cut(s) 470, 500
Bsc4I CCNNNNNNNGG 4 cut(s) 293, 390, 457, 1471
Bse1I ACTGG 7 cut(s) 121, 192, 502, 862, 1237, 1399, 1640
Bse3DI GCAATG 1 cut(s) 804
Bse8I GATNNNNATC 1 cut(s) 549
BseBI CCWGG 1 cut(s) 391
BseDI CCNNGG 4 cut(s) 877, 968, 1314, 1507
BseGI GGATG 3 cut(s) 347, 424, 1254
BseJI GATNNNNATC 1 cut(s) 549
BseLI CCNNNNNNNGG 4 cut(s) 293, 390, 457, 1471
BseMI GCAATG 1 cut(s) 804
BseMII CTCAG 3 cut(s) 161, 945, 1549
BseNI ACTGG 7 cut(s) 121, 192, 502, 862, 1237, 1399, 1640
BseRI GAGGAG 2 cut(s) 1013, 1498
BsgI GTGCAG 2 cut(s) 261, 1733
BshFI GGCC 3 cut(s) 504, 736, 1556
BshNI GGYRCC 2 cut(s) 671, 704
BsiHKAI GWGCWC 1 cut(s) 1367
BsiSI CCGG 1 cut(s) 1472
BslFI GGGAC 2 cut(s) 1196, 1454
BslI CCNNNNNNNGG 4 cut(s) 293, 390, 457, 1471
BsmAI GTCTC 2 cut(s) 349, 1105
BsmFI GGGAC 2 cut(s) 1196, 1454
BsmI GAATGC 1 cut(s) 1284
BsnI GGCC 3 cut(s) 504, 736, 1556
Bso31I GGTCTC 1 cut(s) 349
Bsp1286I GDGCHC 2 cut(s) 770, 1367
Bsp1407I TGTACA 1 cut(s) 649
Bsp143I GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
BspACI CCGC 2 cut(s) 675, 745
BspANI GGCC 3 cut(s) 504, 736, 1556
BspCNI CTCAG 3 cut(s) 162, 946, 1548
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 3 cut(s) 673, 706, 767
BspMAI CTGCAG 3 cut(s) 789, 1449, 1660
BspMI ACCTGC 1 cut(s) 778
BspOI GCTAGC 1 cut(s) 1040
BspPI GGATC 4 cut(s) 25, 90, 830, 1129
BspQI GCTCTTC 1 cut(s) 1289
BspT107I GGYRCC 2 cut(s) 671, 704
BspTNI GGTCTC 1 cut(s) 349
BsrDI GCAATG 1 cut(s) 804
BsrGI TGTACA 1 cut(s) 649
BsrI ACTGG 7 cut(s) 121, 192, 502, 862, 1237, 1399, 1640
BssECI CCNNGG 4 cut(s) 877, 968, 1314, 1507
BssMI GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
BssT1I CCWWGG 3 cut(s) 968, 1314, 1507
Bst2UI CCWGG 1 cut(s) 391
Bst4CI ACNGT 5 cut(s) 337, 637, 985, 1127, 1192
Bst6I CTCTTC 3 cut(s) 806, 1289, 1580
BstAPI GCANNNNNTGC 1 cut(s) 806
BstAUI TGTACA 1 cut(s) 649
BstC8I GCNNGC 1 cut(s) 1038
BstDEI CTNAG 3 cut(s) 170, 954, 1535
BstDSI CCRYGG 1 cut(s) 877
BstF5I GGATG 3 cut(s) 347, 424, 1254
BstKTI GATC 9 cut(s) 20, 85, 486, 553, 838, 1137, 1179, 1551, 1564
BstMAI GTCTC 2 cut(s) 349, 1105
BstMBI GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
BstMWI GCNNNNNNNGC 2 cut(s) 806, 1652
BstNI CCWGG 1 cut(s) 391
BstPAI GACNNNNGTC 1 cut(s) 992
BstSCI CCNGG 2 cut(s) 389, 1470
BstSFI CTRYAG 4 cut(s) 759, 785, 1445, 1656
BstV2I GAAGAC 2 cut(s) 234, 760
BstX2I RGATCY 1 cut(s) 1134
BstYI RGATCY 1 cut(s) 1134
BsuRI GGCC 3 cut(s) 504, 736, 1556
BtgI CCRYGG 1 cut(s) 877
BtgZI GCGATG 1 cut(s) 1102
BtsCI GGATG 3 cut(s) 347, 424, 1254
BtsIMutI CAGTG 3 cut(s) 166, 555, 990
BveI ACCTGC 1 cut(s) 778
Cac8I GCNNGC 1 cut(s) 1038
CciI TCATGA 1 cut(s) 223
Cfr13I GGNCC 1 cut(s) 874
Csp6I GTAC 3 cut(s) 398, 650, 705
CviQI GTAC 3 cut(s) 398, 650, 705
DdeI CTNAG 3 cut(s) 170, 954, 1535
DpnI GATC 9 cut(s) 19, 84, 485, 552, 837, 1136, 1178, 1550, 1563
DpnII GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
DraI TTTAAA 1 cut(s) 1359
EaeI YGGCCR 1 cut(s) 1554
Eam1104I CTCTTC 3 cut(s) 806, 1289, 1580
EarI CTCTTC 3 cut(s) 806, 1289, 1580
Ecl136II GAGCTC 1 cut(s) 1365
Eco130I CCWWGG 3 cut(s) 968, 1314, 1507
Eco24I GRGCYC 2 cut(s) 770, 1367
Eco31I GGTCTC 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 874
Eco53kI GAGCTC 1 cut(s) 1365
Eco57I CTGAAG 1 cut(s) 579
EcoICRI GAGCTC 1 cut(s) 1365
EcoRII CCWGG 1 cut(s) 389
EcoT14I CCWWGG 3 cut(s) 968, 1314, 1507
EcoT38I GRGCYC 2 cut(s) 770, 1367
ErhI CCWWGG 3 cut(s) 968, 1314, 1507
FaqI GGGAC 2 cut(s) 1196, 1454
FbaI TGATCA 4 cut(s) 550, 1176, 1548, 1561
FblI GTMKAC 2 cut(s) 1194, 1731
FokI GGATG 3 cut(s) 334, 411, 1241
FriOI GRGCYC 2 cut(s) 770, 1367
FspBI CTAG 5 cut(s) 470, 1010, 1037, 1208, 1334
GsuI CTGGAG 2 cut(s) 519, 1244
HaeIII GGCC 3 cut(s) 504, 736, 1556
HapII CCGG 1 cut(s) 1472
HincII GTYRAC 2 cut(s) 256, 1732
HindII GTYRAC 2 cut(s) 256, 1732
HinfI GANTC 7 cut(s) 71, 283, 373, 973, 1248, 1266, 1475
HpaII CCGG 1 cut(s) 1472
HphI GGTGA 2 cut(s) 643, 1757
Hpy166II GTNNAC 5 cut(s) 256, 1195, 1431, 1732, 1748
Hpy188I TCNGA 5 cut(s) 107, 835, 868, 1172, 1271
Hpy188III TCNNGA 8 cut(s) 53, 224, 235, 434, 917, 1132, 1261, 1546
Hpy8I GTNNAC 5 cut(s) 256, 1195, 1431, 1732, 1748
HpyAV CCTTC 5 cut(s) 371, 840, 865, 1711, 1736
HpyCH4III ACNGT 5 cut(s) 337, 637, 985, 1127, 1192
HpyCH4V TGCA 7 cut(s) 149, 242, 787, 980, 1447, 1658, 1714
HpyF10VI GCNNNNNNNGC 2 cut(s) 806, 1652
HpyF3I CTNAG 3 cut(s) 170, 954, 1535
KpnI GGTACC 1 cut(s) 708
Ksp22I TGATCA 4 cut(s) 550, 1176, 1548, 1561
Kzo9I GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
LguI GCTCTTC 1 cut(s) 1289
LmnI GCTCC 4 cut(s) 530, 765, 1485, 1520
LweI GCATC 2 cut(s) 301, 1125
MaeI CTAG 5 cut(s) 470, 1010, 1037, 1208, 1334
MaeIII GTNAC 7 cut(s) 173, 271, 416, 631, 985, 1186, 1694
MalI GATC 9 cut(s) 19, 84, 485, 552, 837, 1136, 1178, 1550, 1563
MboI GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
MfeI CAATTG 3 cut(s) 150, 589, 845
MflI RGATCY 1 cut(s) 1134
MhlI GDGCHC 2 cut(s) 770, 1367
MlyI GAGTC 2 cut(s) 967, 1469
MmeI TCCRAC 1 cut(s) 846
MseI TTAA 3 cut(s) 197, 1289, 1358
MslI CAYNNNNRTG 4 cut(s) 427, 479, 1172, 1379
MspA1I CMGCKG 3 cut(s) 44, 953, 1310
MspI CCGG 1 cut(s) 1472
MspR9I CCNGG 2 cut(s) 391, 1472
MunI CAATTG 3 cut(s) 150, 589, 845
Mva1269I GAATGC 1 cut(s) 1284
MvaI CCWGG 1 cut(s) 391
MwoI GCNNNNNNNGC 2 cut(s) 806, 1652
NciI CCSGG 1 cut(s) 1472
NdeII GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
NheI GCTAGC 1 cut(s) 1036
NlaIV GGNNCC 3 cut(s) 673, 706, 767
NmeAIII GCCGAG 1 cut(s) 1669
NmuCI GTSAC 4 cut(s) 416, 631, 985, 1186
PagI TCATGA 1 cut(s) 223
PciSI GCTCTTC 1 cut(s) 1289
PctI GAATGC 1 cut(s) 1284
PfeI GAWTC 5 cut(s) 71, 283, 373, 1248, 1266
PflFI GACNNNGTC 1 cut(s) 1466
PflMI CCANNNNNTGG 3 cut(s) 293, 390, 457
PfoI TCCNGGA 1 cut(s) 1470
PleI GAGTC 2 cut(s) 967, 1469
PpsI GAGTC 2 cut(s) 967, 1469
PshAI GACNNNNGTC 1 cut(s) 992
Psp124BI GAGCTC 1 cut(s) 1367
Psp6I CCWGG 1 cut(s) 389
PspGI CCWGG 1 cut(s) 389
PspN4I GGNNCC 3 cut(s) 673, 706, 767
PspPI GGNCC 1 cut(s) 874
PstI CTGCAG 3 cut(s) 789, 1449, 1660
PsuI RGATCY 1 cut(s) 1134
PsyI GACNNNGTC 1 cut(s) 1466
PvuII CAGCTG 3 cut(s) 44, 953, 1310
RsaI GTAC 3 cut(s) 399, 651, 706
RsaNI GTAC 3 cut(s) 398, 650, 705
RseI CAYNNNNRTG 4 cut(s) 427, 479, 1172, 1379
SacI GAGCTC 1 cut(s) 1367
SalI GTCGAC 1 cut(s) 1730
SapI GCTCTTC 1 cut(s) 1289
SaqAI TTAA 3 cut(s) 197, 1289, 1358
Sau3AI GATC 9 cut(s) 17, 82, 483, 550, 835, 1134, 1176, 1548, 1561
Sau96I GGNCC 1 cut(s) 874
SchI GAGTC 2 cut(s) 967, 1469
ScrFI CCNGG 2 cut(s) 391, 1472
SduI GDGCHC 2 cut(s) 770, 1367
SfaNI GCATC 2 cut(s) 301, 1125
SfcI CTRYAG 4 cut(s) 759, 785, 1445, 1656
SinI GGWCC 1 cut(s) 874
SmiMI CAYNNNNRTG 4 cut(s) 427, 479, 1172, 1379
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
SpeI ACTAGT 1 cut(s) 1009
SsiI CCGC 2 cut(s) 675, 745
SspMI CTAG 5 cut(s) 470, 1010, 1037, 1208, 1334
SstI GAGCTC 1 cut(s) 1367
StyD4I CCNGG 2 cut(s) 389, 1470
StyI CCWWGG 3 cut(s) 968, 1314, 1507
TaaI ACNGT 5 cut(s) 337, 637, 985, 1127, 1192
TaqI TCGA 5 cut(s) 29, 751, 996, 1131, 1731
TatI WGTACW 1 cut(s) 649
TauI GCSGC 1 cut(s) 677
TfiI GAWTC 5 cut(s) 71, 283, 373, 1248, 1266
Tru1I TTAA 3 cut(s) 197, 1289, 1358
Tru9I TTAA 3 cut(s) 197, 1289, 1358
TscAI CASTG 3 cut(s) 166, 562, 990
TseFI GTSAC 4 cut(s) 416, 631, 985, 1186
Tsp45I GTSAC 4 cut(s) 416, 631, 985, 1186
TspGWI ACGGA 2 cut(s) 866, 1174
TspRI CASTG 3 cut(s) 166, 562, 990
Tth111I GACNNNGTC 1 cut(s) 1466
Van91I CCANNNNNTGG 3 cut(s) 293, 390, 457
VpaK11BI GGWCC 1 cut(s) 874
XapI RAATTY 5 cut(s) 855, 911, 946, 1528, 1663
XcmI CCANNNNNNNNNTGG 1 cut(s) 1486
XmiI GTMKAC 2 cut(s) 1194, 1731
XspI CTAG 5 cut(s) 470, 1010, 1037, 1208, 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.