FvH4_7g00272

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000123
Physical Location & Seq
Forward (+)
888586 .. 889741
1156 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g00272.t1

Sequence Viewer

Length: 1122 bp
ATGACCGAGACAGAGACCAGGATCTCAACAGGGGACGCCGATCCCCACTTCTACCTGGGCGGTCAACTGATCGAAACGAACAAGCCGGTGGTGACTCCTATCCTTTCCTCGGTTCTCTCCGGGGAATGGAATCTGAAGGAGAAGCTTTTGGTTCGTGAAGAGGAATCAGGTCGCTTTGTTTTTCAATTCAAGTCGAAGGCAGAGAGAGACCGGATCGTTGGAGGAGGGCCGTGGTCTTTCAACGGTGGCATGTTTATCCTGGCGGAGTACGACGGACTTTGCCCGGTGGAGGATGTCTCTCTGAATCATTTGGAGGTGTGGGTCTCGATCACCAGACTCTGTTTTGCTATGAGGAACAACATGGTTCTTAGCCGTGCTGTGAATGGGTTGGGAGTTTTTGTGAGAGCGGATCCGGGTCTGATTCAGAGGAAGGAGAAGATCCAGCGAGTTAGGGTTGTGTTGGACGTTCGAAACCGGATTCCGGCCGAACGCATCTTTGACTACTTGCCGGAGGTAGCTATCAAGCTGGAGTTTAAGGTTGAAAGAGCTCATGGGATTTGCAAGGATTGTGGATACTTTGGGCATGGAGGAGGTACCTGCAATAAGGGCTTGATTTGTTGGTTACCGGTGGTTGATGTGGTTAGCGCCGTCGATGGTGAGGCGGAGCTTTTGGCAAGCAGGTCAATGGATGGTTTGTTGAAGGAGCCGGTTCTGCAGGTGGATGAGGCTGCACCGACGGGGGTGGAGGTTGGTCTGAGTGGCAACGAGGAGGCGGCTGCACTGGTTGTTACTCCCCCGACTTTTTCGGCGGGAAACCCTAGTTTCAAACTAGGGTTGACTGACTGTACTGGGCTGGGAGGGTTTCGTGGGCCTCTGAGGATTGGGCCAGGCGATTCTGGGTTGAAAAGGAAGTTTGGGTTCGGGTCTGAATCTGATAGGTTTGGGCTCTCTGTAGATGGTCCAGCTGGGACTGATTTGGTGCTGAAGAAGCCTAAGTCGAGCTTCTCTGGTAACAAGAAGAGAACAATGAATGGAGATCCGGAGTTGTCGGATTCTATGGCTCCTAGTCCGGAGGGCGCCAATGCAGAAACAAGCCTCGAGTCCGAGGCTGAGGAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

374

Amino Acids

40.28

Weight (kDa)

5.13

Isoelectric Point (pI)

32.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 36 - 90 2.3e-08 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 706
Acc36I ACCTGC 3 cut(s) 605, 669, 706
Acc65I GGTACC 1 cut(s) 593
AccB1I GGYRCC 2 cut(s) 593, 1076
AccBSI CCGCTC 1 cut(s) 407
AccIII TCCGGA 2 cut(s) 1039, 1069
AciI CCGC 6 cut(s) 60, 263, 407, 662, 773, 809
AclWI GGATC 7 cut(s) 29, 35, 221, 404, 417, 433, 1031
AcoI YGGCCR 1 cut(s) 483
AcuI CTGAAG 2 cut(s) 155, 1004
AcyI GRCGYC 2 cut(s) 36, 1077
AfaI GTAC 3 cut(s) 269, 595, 847
AfiI CCNNNNNNNGG 4 cut(s) 109, 126, 289, 481
AgeI ACCGGT 1 cut(s) 625
AgsI TTSAA 7 cut(s) 185, 190, 241, 542, 700, 826, 904
AjnI CCWGG 4 cut(s) 17, 54, 258, 886
AluBI AGCT 7 cut(s) 145, 518, 526, 548, 667, 965, 1002
AluI AGCT 7 cut(s) 145, 518, 526, 548, 667, 965, 1002
Alw21I GWGCWC 1 cut(s) 550
Alw26I GTCTC 5 cut(s) 2, 8, 201, 301, 328
AlwI GGATC 7 cut(s) 29, 35, 221, 404, 417, 433, 1031
AlwNI CAGNNNCTG 1 cut(s) 339
Ama87I CYCGRG 1 cut(s) 1097
Aor13HI TCCGGA 2 cut(s) 1039, 1069
AoxI GGCC 4 cut(s) 227, 483, 869, 884
ApeKI GCWGC 2 cut(s) 728, 776
AsiGI ACCGGT 1 cut(s) 625
Asp718I GGTACC 1 cut(s) 593
AspLEI GCGC 2 cut(s) 647, 1079
AspS9I GGNCC 4 cut(s) 227, 869, 884, 959
AsuC2I CCSGG 3 cut(s) 121, 284, 414
AsuHPI GGTGA 3 cut(s) 103, 322, 668
AsuII TTCGAA 1 cut(s) 469
AvaI CYCGRG 1 cut(s) 1097
AvaII GGWCC 1 cut(s) 959
BamHI GGATCC 1 cut(s) 409
BanI GGYRCC 2 cut(s) 593, 1076
BanII GRGCYC 2 cut(s) 550, 948
Bbv12I GWGCWC 1 cut(s) 550
BbvCI CCTCAGC 1 cut(s) 1110
BbvI GCAGC 2 cut(s) 715, 763
BccI CCATC 3 cut(s) 647, 683, 950
BceAI ACGGC 3 cut(s) 214, 357, 632
BciT130I CCWGG 4 cut(s) 19, 56, 260, 888
BciVI GTATCC 1 cut(s) 566
BcnI CCSGG 3 cut(s) 121, 284, 414
BcoDI GTCTC 5 cut(s) 2, 8, 201, 301, 328
BfaI CTAG 3 cut(s) 819, 830, 1065
BfmI CTRYAG 2 cut(s) 713, 951
BfoI RGCGCY 2 cut(s) 648, 1080
BfuAI ACCTGC 3 cut(s) 605, 669, 706
BfuI GTATCC 1 cut(s) 566
BisI GCNGC 3 cut(s) 729, 774, 777
BlsI GCNGC 3 cut(s) 730, 775, 778
Bme1390I CCNGG 7 cut(s) 19, 56, 121, 260, 284, 414, 888
Bme18I GGWCC 1 cut(s) 959
BmeT110I CYCGRG 1 cut(s) 1097
BmgT120I GGNCC 4 cut(s) 227, 869, 884, 959
BmiI GGNNCC 5 cut(s) 411, 595, 705, 1062, 1078
BmrFI CCNGG 7 cut(s) 19, 56, 121, 260, 284, 414, 888
BmrI ACTGGG 1 cut(s) 858
BmsI GCATC 1 cut(s) 501
BmuI ACTGGG 1 cut(s) 858
BplI GAGNNNNNCTC 2 cut(s) 281, 313
BpmI CTGGAG 1 cut(s) 548
Bpu10I CCTNAGC 1 cut(s) 1110
Bpu14I TTCGAA 1 cut(s) 469
BpuMI CCSGG 3 cut(s) 121, 284, 414
BsaHI GRCGYC 2 cut(s) 36, 1077
BsaI GGTCTC 3 cut(s) 8, 201, 328
BsaJI CCNNGG 5 cut(s) 55, 108, 120, 230, 1104
BsaWI WCCGGW 5 cut(s) 210, 474, 625, 1039, 1069
BsaXI ACNNNNNCTCC 2 cut(s) 384, 414
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 126, 289, 481
Bse118I RCCGGY 3 cut(s) 85, 625, 706
Bse1I ACTGG 2 cut(s) 786, 853
BseAI TCCGGA 2 cut(s) 1039, 1069
BseBI CCWGG 4 cut(s) 19, 56, 260, 888
BseDI CCNNGG 5 cut(s) 55, 108, 120, 230, 1104
BseGI GGATG 3 cut(s) 298, 694, 727
BseLI CCNNNNNNNGG 4 cut(s) 109, 126, 289, 481
BseMII CTCAG 3 cut(s) 746, 866, 1101
BseNI ACTGG 2 cut(s) 786, 853
BseRI GAGGAG 3 cut(s) 237, 603, 782
BseX3I CGGCCG 1 cut(s) 483
BseXI GCAGC 2 cut(s) 715, 763
BseYI CCCAGC 2 cut(s) 853, 965
BsgI GTGCAG 2 cut(s) 714, 762
Bsh1285I CGRYCG 1 cut(s) 486
BshFI GGCC 4 cut(s) 229, 485, 871, 886
BshNI GGYRCC 2 cut(s) 593, 1076
BshTI ACCGGT 1 cut(s) 625
BsiEI CGRYCG 1 cut(s) 486
BsiHKAI GWGCWC 1 cut(s) 550
BsiHKCI CYCGRG 1 cut(s) 1097
BslFI GGGAC 2 cut(s) 47, 982
BslI CCNNNNNNNGG 4 cut(s) 109, 126, 289, 481
BsmAI GTCTC 5 cut(s) 2, 8, 201, 301, 328
BsmFI GGGAC 2 cut(s) 47, 982
BsnI GGCC 4 cut(s) 229, 485, 871, 886
Bso31I GGTCTC 3 cut(s) 8, 201, 328
BsoBI CYCGRG 1 cut(s) 1097
Bsp119I TTCGAA 1 cut(s) 469
Bsp1286I GDGCHC 2 cut(s) 550, 948
Bsp13I TCCGGA 2 cut(s) 1039, 1069
Bsp143I GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
BspACI CCGC 6 cut(s) 60, 263, 407, 662, 773, 809
BspANI GGCC 4 cut(s) 229, 485, 871, 886
BspCNI CTCAG 3 cut(s) 747, 867, 1102
BspEI TCCGGA 2 cut(s) 1039, 1069
BspLI GGNNCC 5 cut(s) 411, 595, 705, 1062, 1078
BspMAI CTGCAG 1 cut(s) 717
BspMI ACCTGC 3 cut(s) 605, 669, 706
BspPI GGATC 7 cut(s) 29, 35, 221, 404, 417, 433, 1031
BspT104I TTCGAA 1 cut(s) 469
BspT107I GGYRCC 2 cut(s) 593, 1076
BspTNI GGTCTC 3 cut(s) 8, 201, 328
BsrBI CCGCTC 1 cut(s) 407
BsrFI RCCGGY 3 cut(s) 85, 625, 706
BsrI ACTGG 2 cut(s) 786, 853
BssAI RCCGGY 3 cut(s) 85, 625, 706
BssECI CCNNGG 5 cut(s) 55, 108, 120, 230, 1104
BssMI GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
BssNI GRCGYC 2 cut(s) 36, 1077
Bst2UI CCWGG 4 cut(s) 19, 56, 260, 888
Bst4CI ACNGT 2 cut(s) 245, 845
Bst6I CTCTTC 2 cut(s) 153, 1013
BstACI GRCGYC 2 cut(s) 36, 1077
BstBI TTCGAA 1 cut(s) 469
BstC8I GCNNGC 1 cut(s) 676
BstDEI CTNAG 5 cut(s) 368, 755, 875, 993, 1110
BstDSI CCRYGG 1 cut(s) 230
BstEII GGTNACC 1 cut(s) 621
BstF5I GGATG 3 cut(s) 298, 694, 727
BstH2I RGCGCY 2 cut(s) 648, 1080
BstHHI GCGC 2 cut(s) 647, 1079
BstKTI GATC 8 cut(s) 24, 43, 72, 216, 330, 412, 441, 1039
BstMAI GTCTC 5 cut(s) 2, 8, 201, 301, 328
BstMBI GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
BstMCI CGRYCG 1 cut(s) 486
BstMWI GCNNNNNNNGC 3 cut(s) 606, 712, 988
BstNI CCWGG 4 cut(s) 19, 56, 260, 888
BstNSI RCATGY 1 cut(s) 253
BstPI GGTNACC 1 cut(s) 621
BstSCI CCNGG 7 cut(s) 17, 54, 119, 258, 282, 412, 886
BstSFI CTRYAG 2 cut(s) 713, 951
BstV1I GCAGC 2 cut(s) 715, 763
BstX2I RGATCY 4 cut(s) 21, 409, 438, 1036
BstYI RGATCY 4 cut(s) 21, 409, 438, 1036
BstZI CGGCCG 1 cut(s) 483
BsuI GTATCC 1 cut(s) 566
BsuRI GGCC 4 cut(s) 229, 485, 871, 886
BtgI CCRYGG 1 cut(s) 230
BtsCI GGATG 3 cut(s) 298, 694, 727
BtsIMutI CAGTG 1 cut(s) 779
BveI ACCTGC 3 cut(s) 605, 669, 706
Cac8I GCNNGC 1 cut(s) 676
CaiI CAGNNNCTG 1 cut(s) 339
CfoI GCGC 2 cut(s) 647, 1079
Cfr10I RCCGGY 3 cut(s) 85, 625, 706
Cfr13I GGNCC 4 cut(s) 227, 869, 884, 959
CseI GACGC 1 cut(s) 44
Csp6I GTAC 3 cut(s) 268, 594, 846
CspAI ACCGGT 1 cut(s) 625
CspCI CAANNNNNGTGG 2 cut(s) 550, 585
CviAII CATG 4 cut(s) 250, 361, 551, 584
CviQI GTAC 3 cut(s) 268, 594, 846
DdeI CTNAG 5 cut(s) 368, 755, 875, 993, 1110
DinI GGCGCC 1 cut(s) 1078
DpnI GATC 8 cut(s) 23, 42, 71, 215, 329, 411, 440, 1038
DpnII GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
EaeI YGGCCR 1 cut(s) 483
EagI CGGCCG 1 cut(s) 483
Eam1104I CTCTTC 2 cut(s) 153, 1013
EarI CTCTTC 2 cut(s) 153, 1013
EciI GGCGGA 2 cut(s) 278, 677
Ecl136II GAGCTC 1 cut(s) 548
EclXI CGGCCG 1 cut(s) 483
Eco24I GRGCYC 2 cut(s) 550, 948
Eco31I GGTCTC 3 cut(s) 8, 201, 328
Eco47I GGWCC 1 cut(s) 959
Eco52I CGGCCG 1 cut(s) 483
Eco53kI GAGCTC 1 cut(s) 548
Eco57I CTGAAG 2 cut(s) 155, 1004
Eco88I CYCGRG 1 cut(s) 1097
Eco91I GGTNACC 1 cut(s) 621
EcoICRI GAGCTC 1 cut(s) 548
EcoO65I GGTNACC 1 cut(s) 621
EcoRII CCWGG 4 cut(s) 17, 54, 258, 886
EcoT38I GRGCYC 2 cut(s) 550, 948
EgeI GGCGCC 1 cut(s) 1078
EheI GGCGCC 1 cut(s) 1078
FaeI CATG 4 cut(s) 253, 364, 554, 587
FaiI YATR 6 cut(s) 251, 350, 362, 552, 585, 1058
FalI AAGNNNNNCTT 2 cut(s) 986, 1018
FaqI GGGAC 2 cut(s) 47, 982
FatI CATG 4 cut(s) 249, 360, 550, 583
FauI CCCGC 1 cut(s) 802
Fnu4HI GCNGC 3 cut(s) 729, 774, 777
FokI GGATG 3 cut(s) 305, 701, 734
FriOI GRGCYC 2 cut(s) 550, 948
Fsp4HI GCNGC 3 cut(s) 729, 774, 777
FspBI CTAG 3 cut(s) 819, 830, 1065
GlaI GCGC 2 cut(s) 646, 1078
GluI GCNGC 3 cut(s) 729, 774, 777
GsaI CCCAGC 2 cut(s) 857, 969
GsuI CTGGAG 1 cut(s) 548
HaeII RGCGCY 2 cut(s) 648, 1080
HaeIII GGCC 4 cut(s) 229, 485, 871, 886
HgaI GACGC 1 cut(s) 44
HhaI GCGC 2 cut(s) 647, 1079
Hin1I GRCGYC 2 cut(s) 36, 1077
Hin1II CATG 4 cut(s) 253, 364, 554, 587
Hin6I GCGC 2 cut(s) 645, 1077
HinP1I GCGC 2 cut(s) 645, 1077
HincII GTYRAC 2 cut(s) 65, 837
HindII GTYRAC 2 cut(s) 65, 837
HindIII AAGCTT 1 cut(s) 143
HphI GGTGA 3 cut(s) 103, 322, 668
Hpy166II GTNNAC 2 cut(s) 65, 837
Hpy188III TCNNGA 4 cut(s) 155, 325, 1040, 1070
Hpy8I GTNNAC 2 cut(s) 65, 837
Hpy99I CGWCG 3 cut(s) 275, 653, 739
HpyAV CCTTC 4 cut(s) 130, 190, 424, 694
HpyCH4III ACNGT 2 cut(s) 245, 845
HpyCH4IV ACGT 1 cut(s) 465
HpyCH4V TGCA 6 cut(s) 561, 600, 715, 731, 779, 1085
HpyF10VI GCNNNNNNNGC 3 cut(s) 606, 712, 988
HpyF3I CTNAG 5 cut(s) 368, 755, 875, 993, 1110
HpySE526I ACGT 1 cut(s) 465
Hsp92I GRCGYC 2 cut(s) 36, 1077
Hsp92II CATG 4 cut(s) 253, 364, 554, 587
HspAI GCGC 2 cut(s) 645, 1077
KasI GGCGCC 1 cut(s) 1076
Kpn2I TCCGGA 2 cut(s) 1039, 1069
KpnI GGTACC 1 cut(s) 597
Kzo9I GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
LmnI GCTCC 3 cut(s) 664, 703, 1066
Lsp1109I GCAGC 2 cut(s) 715, 763
LweI GCATC 1 cut(s) 501
MaeI CTAG 3 cut(s) 819, 830, 1065
MaeII ACGT 1 cut(s) 465
MaeIII GTNAC 4 cut(s) 91, 621, 787, 1010
MalI GATC 8 cut(s) 23, 42, 71, 215, 329, 411, 440, 1038
MbiI CCGCTC 1 cut(s) 407
MboI GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
MboII GAAGA 4 cut(s) 170, 448, 997, 1030
MflI RGATCY 4 cut(s) 21, 409, 438, 1036
MhlI GDGCHC 2 cut(s) 550, 948
MluCI AATT 1 cut(s) 185
Mly113I GGCGCC 1 cut(s) 1077
MlyI GAGTC 3 cut(s) 88, 330, 1109
MmeI TCCRAC 3 cut(s) 199, 441, 1029
MroI TCCGGA 2 cut(s) 1039, 1069
MseI TTAA 1 cut(s) 534
MspA1I CMGCKG 1 cut(s) 965
MspR9I CCNGG 7 cut(s) 19, 56, 121, 260, 284, 414, 888
MvaI CCWGG 4 cut(s) 19, 56, 260, 888
MwoI GCNNNNNNNGC 3 cut(s) 606, 712, 988
NarI GGCGCC 1 cut(s) 1077
NciI CCSGG 3 cut(s) 121, 284, 414
NdeII GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
NlaIII CATG 4 cut(s) 253, 364, 554, 587
NlaIV GGNNCC 5 cut(s) 411, 595, 705, 1062, 1078
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 1 cut(s) 253
NspV TTCGAA 1 cut(s) 469
PaeR7I CTCGAG 1 cut(s) 1097
PaqCI CACCTGC 1 cut(s) 706
PfeI GAWTC 8 cut(s) 130, 164, 304, 421, 478, 893, 929, 1052
PinAI ACCGGT 1 cut(s) 625
PkrI GCNGC 3 cut(s) 730, 775, 778
PleI GAGTC 3 cut(s) 88, 330, 1108
PluTI GGCGCC 1 cut(s) 1080
PpsI GAGTC 3 cut(s) 88, 330, 1108
Psp124BI GAGCTC 1 cut(s) 550
Psp6I CCWGG 4 cut(s) 17, 54, 258, 886
PspEI GGTNACC 1 cut(s) 621
PspFI CCCAGC 2 cut(s) 853, 965
PspGI CCWGG 4 cut(s) 17, 54, 258, 886
PspN4I GGNNCC 5 cut(s) 411, 595, 705, 1062, 1078
PspPI GGNCC 4 cut(s) 227, 869, 884, 959
PspXI VCTCGAGB 1 cut(s) 1097
PstI CTGCAG 1 cut(s) 717
PstNI CAGNNNCTG 1 cut(s) 339
PsuI RGATCY 4 cut(s) 21, 409, 438, 1036
PvuII CAGCTG 1 cut(s) 965
RsaI GTAC 3 cut(s) 269, 595, 847
RsaNI GTAC 3 cut(s) 268, 594, 846
SacI GAGCTC 1 cut(s) 550
SaqAI TTAA 1 cut(s) 534
SatI GCNGC 3 cut(s) 729, 774, 777
Sau3AI GATC 8 cut(s) 21, 40, 69, 213, 327, 409, 438, 1036
Sau96I GGNCC 4 cut(s) 227, 869, 884, 959
SchI GAGTC 3 cut(s) 88, 330, 1109
ScrFI CCNGG 7 cut(s) 19, 56, 121, 260, 284, 414, 888
SduI GDGCHC 2 cut(s) 550, 948
SfaNI GCATC 1 cut(s) 501
SfcI CTRYAG 2 cut(s) 713, 951
SfoI GGCGCC 1 cut(s) 1078
Sfr274I CTCGAG 1 cut(s) 1097
SfuI TTCGAA 1 cut(s) 469
SinI GGWCC 1 cut(s) 959
SlaI CTCGAG 1 cut(s) 1097
SmlI CTYRAG 1 cut(s) 1097
SmoI CTYRAG 1 cut(s) 1097
Sse9I AATT 1 cut(s) 185
SsiI CCGC 6 cut(s) 60, 263, 407, 662, 773, 809
SspDI GGCGCC 1 cut(s) 1076
SspMI CTAG 3 cut(s) 819, 830, 1065
SstI GAGCTC 1 cut(s) 550
StyD4I CCNGG 7 cut(s) 17, 54, 119, 258, 282, 412, 886
TaaI ACNGT 2 cut(s) 245, 845
TaiI ACGT 1 cut(s) 468
TaqI TCGA 7 cut(s) 72, 194, 326, 469, 651, 998, 1098
TaqII GACCGA 1 cut(s) 20
TasI AATT 1 cut(s) 185
TatI WGTACW 1 cut(s) 845
TauI GCSGC 1 cut(s) 776
TfiI GAWTC 8 cut(s) 130, 164, 304, 421, 478, 893, 929, 1052
Tru1I TTAA 1 cut(s) 534
Tru9I TTAA 1 cut(s) 534
TscAI CASTG 1 cut(s) 786
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 2 cut(s) 728, 776
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 1 cut(s) 1043
TspGWI ACGGA 1 cut(s) 288
TspRI CASTG 1 cut(s) 786
VpaK11BI GGWCC 1 cut(s) 959
XceI RCATGY 1 cut(s) 253
XhoI CTCGAG 1 cut(s) 1097
XspI CTAG 3 cut(s) 819, 830, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.