Rmu_ssc0000372.1_g000063

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000372.1
OG0000123
Physical Location & Seq
Forward (+)
233060 .. 234068
1009 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000372.1_g000063.1.cds

Sequence Viewer

Length: 849 bp
atggcagcgggggcagtggtggctaaccctgcacggactgaggcagctgtggtgaatctgattgggggtggcgaagataacaattctatgttgttggtggaggattatgatggtgttagggctgtggaggaggtaccgctgcgctaccttgagatttgggtggaacgagccctaaccctacttggaaaagatttggggaagtttgtacggtttgatcaagcggcgatggtgaggaaggagccgatccagaggatccgggtgatccatgatgtacgacgtcggatttgggttcggcgcacgtacaacttctctccggaggtggcggtggttttggagtttaggtacgaaaagtgccatgggatctgcaagaggtgtgggttttttgtccatggacaggatggctgtgacaaaggacttgaagagacagcggcagctctggtttctgtgccggcgggggcgggggcggagatgctccctacggggccgacggagttgggcttgatgtcggaggtggctggaggtagggtggcggtggatagaccggtgccggatgctgtagtagctgctgctgtgaccgctccggaaaaactggcaggaaaccctaattttgaattaggaggctcaattgtggatttgggtgtgagaaagaagatctacaagcctaggttggcatttatcccgccggaattccaacttggggagttggtggaggttccaatttcgatggagccggctccaaagaagaagaggggtcgtccatctggtcgtcgggttacgaatgtggaaggtaaaaatgcaggtgtggatttaagctccaactcgaatgggaaggagctgattattgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

282

Amino Acids

30.51

Weight (kDa)

8.3

Isoelectric Point (pI)

37.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 788
AatII GACGTC 1 cut(s) 280
Acc36I ACCTGC 1 cut(s) 788
Acc65I GGTACC 1 cut(s) 133
AccB1I GGYRCC 2 cut(s) 133, 544
AccBSI CCGCTC 1 cut(s) 578
AccIII TCCGGA 2 cut(s) 313, 580
AclWI GGATC 5 cut(s) 238, 247, 256, 260, 368
AcsI RAATTY 1 cut(s) 686
AcyI GRCGYC 1 cut(s) 277
AfaI GTAC 5 cut(s) 135, 207, 273, 302, 344
AfiI CCNNNNNNNGG 2 cut(s) 394, 697
AgeI ACCGGT 1 cut(s) 541
AgsI TTSAA 2 cut(s) 419, 611
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
AluBI AGCT 5 cut(s) 47, 434, 563, 813, 835
AluI AGCT 5 cut(s) 47, 434, 563, 813, 835
Alw26I GTCTC 1 cut(s) 416
AlwI GGATC 5 cut(s) 238, 247, 256, 260, 368
Aor13HI TCCGGA 2 cut(s) 313, 580
AoxI GGCC 1 cut(s) 482
ApeKI GCWGC 6 cut(s) 5, 44, 139, 431, 563, 566
ApoI RAATTY 1 cut(s) 686
ArsI GACNNNNNNTTYG 2 cut(s) 267, 299
AsiGI ACCGGT 1 cut(s) 541
Asp718I GGTACC 1 cut(s) 133
AspA2I CCTAGG 1 cut(s) 662
AspLEI GCGC 2 cut(s) 144, 297
AspS9I GGNCC 1 cut(s) 482
AsuC2I CCSGG 1 cut(s) 257
AsuHPI GGTGA 3 cut(s) 64, 241, 271
AvrII CCTAGG 1 cut(s) 662
BamHI GGATCC 1 cut(s) 252
BanI GGYRCC 2 cut(s) 133, 544
BanII GRGCYC 1 cut(s) 172
BbvI GCAGC 6 cut(s) 17, 56, 126, 443, 550, 553
BccI CCATC 5 cut(s) 104, 220, 392, 718, 766
BclI TGATCA 1 cut(s) 214
BcnI CCSGG 1 cut(s) 257
BcoDI GTCTC 1 cut(s) 416
BfaI CTAG 1 cut(s) 663
BfmI CTRYAG 1 cut(s) 555
BfuAI ACCTGC 1 cut(s) 788
BglII AGATCT 1 cut(s) 651
BisI GCNGC 8 cut(s) 6, 45, 140, 222, 429, 432, 564, 567
BlnI CCTAGG 1 cut(s) 662
BlsI GCNGC 8 cut(s) 7, 46, 141, 223, 430, 433, 565, 568
Bme1390I CCNGG 1 cut(s) 257
BmgT120I GGNCC 1 cut(s) 482
BmiI GGNNCC 8 cut(s) 135, 240, 254, 483, 546, 714, 729, 735
BmrFI CCNGG 1 cut(s) 257
BmsI GCATC 2 cut(s) 459, 541
BpmI CTGGAG 1 cut(s) 537
BpuEI CTTGAG 1 cut(s) 170
BpuMI CCSGG 1 cut(s) 257
BsaAI YACGTR 1 cut(s) 300
BsaHI GRCGYC 1 cut(s) 277
BsaJI CCNNGG 3 cut(s) 355, 388, 662
BsaWI WCCGGW 3 cut(s) 313, 541, 580
BsaXI ACNNNNNCTCC 4 cut(s) 326, 356, 510, 540
Bsc4I CCNNNNNNNGG 2 cut(s) 394, 697
Bse118I RCCGGY 3 cut(s) 448, 541, 730
Bse1I ACTGG 1 cut(s) 594
BseAI TCCGGA 2 cut(s) 313, 580
BseDI CCNNGG 3 cut(s) 355, 388, 662
BseGI GGATG 2 cut(s) 403, 556
BseLI CCNNNNNNNGG 2 cut(s) 394, 697
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 1 cut(s) 594
BseRI GAGGAG 1 cut(s) 143
BseXI GCAGC 6 cut(s) 17, 56, 126, 443, 550, 553
BsgI GTGCAG 1 cut(s) 15
BshFI GGCC 1 cut(s) 484
BshNI GGYRCC 2 cut(s) 133, 544
BshTI ACCGGT 1 cut(s) 541
BsiSI CCGG 8 cut(s) 256, 314, 449, 542, 548, 581, 683, 731
BslI CCNNNNNNNGG 2 cut(s) 394, 697
BsmAI GTCTC 1 cut(s) 416
BsnI GGCC 1 cut(s) 484
Bsp1286I GDGCHC 1 cut(s) 172
Bsp13I TCCGGA 2 cut(s) 313, 580
Bsp143I GATC 6 cut(s) 214, 243, 252, 261, 360, 651
Bsp19I CCATGG 2 cut(s) 355, 388
BspANI GGCC 1 cut(s) 484
BspCNI CTCAG 1 cut(s) 31
BspEI TCCGGA 2 cut(s) 313, 580
BspLI GGNNCC 8 cut(s) 135, 240, 254, 483, 546, 714, 729, 735
BspMI ACCTGC 1 cut(s) 788
BspPI GGATC 5 cut(s) 238, 247, 256, 260, 368
BspT107I GGYRCC 2 cut(s) 133, 544
BsrBI CCGCTC 1 cut(s) 578
BsrFI RCCGGY 3 cut(s) 448, 541, 730
BsrI ACTGG 1 cut(s) 594
BssAI RCCGGY 3 cut(s) 448, 541, 730
BssECI CCNNGG 3 cut(s) 355, 388, 662
BssMI GATC 6 cut(s) 214, 243, 252, 261, 360, 651
BssNI GRCGYC 1 cut(s) 277
BssT1I CCWWGG 3 cut(s) 355, 388, 662
Bst4CI ACNGT 1 cut(s) 210
Bst6I CTCTTC 2 cut(s) 414, 740
BstACI GRCGYC 1 cut(s) 277
BstBAI YACGTR 1 cut(s) 300
BstC8I GCNNGC 2 cut(s) 450, 732
BstDEI CTNAG 2 cut(s) 39, 846
BstDSI CCRYGG 2 cut(s) 355, 388
BstF5I GGATG 2 cut(s) 403, 556
BstHHI GCGC 2 cut(s) 144, 297
BstKTI GATC 6 cut(s) 217, 246, 255, 264, 363, 654
BstMAI GTCTC 1 cut(s) 416
BstMBI GATC 6 cut(s) 214, 243, 252, 261, 360, 651
BstMWI GCNNNNNNNGC 5 cut(s) 11, 20, 29, 560, 575
BstSCI CCNGG 1 cut(s) 255
BstSFI CTRYAG 1 cut(s) 555
BstV1I GCAGC 6 cut(s) 17, 56, 126, 443, 550, 553
BstX2I RGATCY 3 cut(s) 252, 360, 651
BstYI RGATCY 3 cut(s) 252, 360, 651
BsuRI GGCC 1 cut(s) 484
BtgI CCRYGG 2 cut(s) 355, 388
BtgZI GCGATG 1 cut(s) 239
BtsCI GGATG 2 cut(s) 403, 556
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 1 cut(s) 21
BveI ACCTGC 1 cut(s) 788
Cac8I GCNNGC 2 cut(s) 450, 732
CfoI GCGC 2 cut(s) 144, 297
Cfr10I RCCGGY 3 cut(s) 448, 541, 730
Cfr13I GGNCC 1 cut(s) 482
Csp6I GTAC 5 cut(s) 134, 206, 272, 301, 343
CspAI ACCGGT 1 cut(s) 541
CspCI CAANNNNNGTGG 2 cut(s) 355, 390
CviAII CATG 3 cut(s) 266, 356, 389
CviQI GTAC 5 cut(s) 134, 206, 272, 301, 343
DdeI CTNAG 2 cut(s) 39, 846
DpnI GATC 6 cut(s) 216, 245, 254, 263, 362, 653
DpnII GATC 6 cut(s) 214, 243, 252, 261, 360, 651
Eam1104I CTCTTC 2 cut(s) 414, 740
EarI CTCTTC 2 cut(s) 414, 740
EciI GGCGGA 1 cut(s) 479
Eco130I CCWWGG 3 cut(s) 355, 388, 662
Eco24I GRGCYC 1 cut(s) 172
EcoRI GAATTC 1 cut(s) 686
EcoT14I CCWWGG 3 cut(s) 355, 388, 662
EcoT38I GRGCYC 1 cut(s) 172
ErhI CCWWGG 3 cut(s) 355, 388, 662
FaeI CATG 3 cut(s) 269, 359, 392
FaiI YATR 5 cut(s) 89, 108, 267, 357, 390
FatI CATG 3 cut(s) 265, 355, 388
FauI CCCGC 3 cut(s) 445, 451, 687
FbaI TGATCA 1 cut(s) 214
Fnu4HI GCNGC 8 cut(s) 6, 45, 140, 222, 429, 432, 564, 567
FokI GGATG 2 cut(s) 410, 563
FriOI GRGCYC 1 cut(s) 172
Fsp4HI GCNGC 8 cut(s) 6, 45, 140, 222, 429, 432, 564, 567
FspBI CTAG 1 cut(s) 663
GlaI GCGC 2 cut(s) 143, 296
GluI GCNGC 8 cut(s) 6, 45, 140, 222, 429, 432, 564, 567
GsuI CTGGAG 1 cut(s) 537
HaeIII GGCC 1 cut(s) 484
HapII CCGG 8 cut(s) 256, 314, 449, 542, 548, 581, 683, 731
HhaI GCGC 2 cut(s) 144, 297
Hin1I GRCGYC 1 cut(s) 277
Hin1II CATG 3 cut(s) 269, 359, 392
Hin6I GCGC 2 cut(s) 142, 295
HinP1I GCGC 2 cut(s) 142, 295
HinfI GANTC 1 cut(s) 55
HpaII CCGG 8 cut(s) 256, 314, 449, 542, 548, 581, 683, 731
HphI GGTGA 3 cut(s) 64, 241, 271
Hpy188I TCNGA 3 cut(s) 60, 282, 508
Hpy188III TCNNGA 3 cut(s) 247, 314, 581
Hpy99I CGWCG 4 cut(s) 279, 282, 490, 771
HpyAV CCTTC 3 cut(s) 229, 779, 823
HpyCH4III ACNGT 1 cut(s) 210
HpyCH4IV ACGT 2 cut(s) 277, 299
HpyCH4V TGCA 3 cut(s) 32, 366, 797
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 20, 29, 560, 575
HpyF3I CTNAG 2 cut(s) 39, 846
HpySE526I ACGT 2 cut(s) 277, 299
Hsp92I GRCGYC 1 cut(s) 277
Hsp92II CATG 3 cut(s) 269, 359, 392
HspAI GCGC 2 cut(s) 142, 295
Kpn2I TCCGGA 2 cut(s) 313, 580
KpnI GGTACC 1 cut(s) 137
KroI GCCGGC 2 cut(s) 448, 730
KroNI GCCGGC 2 cut(s) 450, 732
Ksp22I TGATCA 1 cut(s) 214
Kzo9I GATC 6 cut(s) 214, 243, 252, 261, 360, 651
LmnI GCTCC 7 cut(s) 238, 477, 583, 727, 739, 818, 832
Lsp1109I GCAGC 6 cut(s) 17, 56, 126, 443, 550, 553
LweI GCATC 2 cut(s) 459, 541
MaeI CTAG 1 cut(s) 663
MaeII ACGT 2 cut(s) 277, 299
MaeIII GTNAC 3 cut(s) 404, 571, 772
MalI GATC 6 cut(s) 216, 245, 254, 263, 362, 653
MbiI CCGCTC 1 cut(s) 578
MboI GATC 6 cut(s) 214, 243, 252, 261, 360, 651
MboII GAAGA 5 cut(s) 86, 431, 661, 754, 757
MfeI CAATTG 1 cut(s) 624
MflI RGATCY 3 cut(s) 252, 360, 651
MhlI GDGCHC 1 cut(s) 172
MluCI AATT 6 cut(s) 82, 604, 611, 624, 686, 717
MmeI TCCRAC 4 cut(s) 260, 486, 715, 840
MroI TCCGGA 2 cut(s) 313, 580
MroNI GCCGGC 2 cut(s) 448, 730
MseI TTAA 1 cut(s) 809
MspA1I CMGCKG 4 cut(s) 8, 47, 139, 428
MspI CCGG 8 cut(s) 256, 314, 449, 542, 548, 581, 683, 731
MspR9I CCNGG 1 cut(s) 257
MunI CAATTG 1 cut(s) 624
MwoI GCNNNNNNNGC 5 cut(s) 11, 20, 29, 560, 575
NaeI GCCGGC 2 cut(s) 450, 732
NciI CCSGG 1 cut(s) 257
NcoI CCATGG 2 cut(s) 355, 388
NdeII GATC 6 cut(s) 214, 243, 252, 261, 360, 651
NgoMIV GCCGGC 2 cut(s) 448, 730
NlaIII CATG 3 cut(s) 269, 359, 392
NlaIV GGNNCC 8 cut(s) 135, 240, 254, 483, 546, 714, 729, 735
NmuCI GTSAC 2 cut(s) 404, 571
PaqCI CACCTGC 1 cut(s) 788
PdiI GCCGGC 2 cut(s) 450, 732
PfeI GAWTC 1 cut(s) 55
PinAI ACCGGT 1 cut(s) 541
PkrI GCNGC 8 cut(s) 7, 46, 141, 223, 430, 433, 565, 568
Ppu21I YACGTR 1 cut(s) 300
PspN4I GGNNCC 8 cut(s) 135, 240, 254, 483, 546, 714, 729, 735
PspPI GGNCC 1 cut(s) 482
PsuI RGATCY 3 cut(s) 252, 360, 651
PvuII CAGCTG 1 cut(s) 47
RsaI GTAC 5 cut(s) 135, 207, 273, 302, 344
RsaNI GTAC 5 cut(s) 134, 206, 272, 301, 343
SaqAI TTAA 1 cut(s) 809
SatI GCNGC 8 cut(s) 6, 45, 140, 222, 429, 432, 564, 567
Sau3AI GATC 6 cut(s) 214, 243, 252, 261, 360, 651
Sau96I GGNCC 1 cut(s) 482
ScrFI CCNGG 1 cut(s) 257
SduI GDGCHC 1 cut(s) 172
SfaNI GCATC 2 cut(s) 459, 541
SfcI CTRYAG 1 cut(s) 555
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 6 cut(s) 82, 604, 611, 624, 686, 717
SspMI CTAG 1 cut(s) 663
StyD4I CCNGG 1 cut(s) 255
StyI CCWWGG 3 cut(s) 355, 388, 662
TaaI ACNGT 1 cut(s) 210
TaiI ACGT 2 cut(s) 280, 302
TaqI TCGA 2 cut(s) 722, 821
TasI AATT 6 cut(s) 82, 604, 611, 624, 686, 717
TauI GCSGC 2 cut(s) 224, 431
TfiI GAWTC 1 cut(s) 55
Tru1I TTAA 1 cut(s) 809
Tru9I TTAA 1 cut(s) 809
TscAI CASTG 1 cut(s) 21
TseFI GTSAC 2 cut(s) 404, 571
TseI GCWGC 6 cut(s) 5, 44, 139, 431, 563, 566
Tsp45I GTSAC 2 cut(s) 404, 571
TspGWI ACGGA 2 cut(s) 49, 503
TspRI CASTG 1 cut(s) 21
XapI RAATTY 1 cut(s) 686
XcmI CCANNNNNNNNNTGG 1 cut(s) 395
XmaJI CCTAGG 1 cut(s) 662
XspI CTAG 1 cut(s) 663
ZraI GACGTC 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.