FvH4_4g01621

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000123
Physical Location & Seq
Forward (+)
1422801 .. 1424172
1372 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g01621.t1

Sequence Viewer

Length: 1191 bp
ATGACTAAGCCGATGGTGCTGCCGGTGTTCACGACGGCGGCTGCTGCGATATGGAATCTTAAGGAGAAGGTTTTGATCAGTGAAGAGGAGCCGGGAATCTATGTTTTTCAGTTCAAGAATAGGCAAGAGAGAGATCAAATCCTTGGTGGTGGACCTTGGTTCTTCAATGGATCAATGATCTTGCTGGCAGAGTATGACAGGTTGAGGCCGCTAAAGGAGATCTCTCTGCATCTCCTTGAAGTTTGGCTCTCAGTTGCCGGTCTGCGCTTTGCGATGACAAACGAAAAGGTTCTCACTCGAATTGGGAATGACCTTGGAACCTTTGTTCTGGTGGATCCAAAGACGGTACAGATGAAGAAGAAAATCCAACGAGTTAGGGTTCTCATGGATGTGCGCCAAAGGATCCCAGCCGGAAGAGTTTTTGACTACTCGTCGGAGATCTCAGTAGATCTTGAGTTCACACGTGAGAAATGCAATGGGATCTGCCGGGAGTGTGGCTTTTTTGGCCATGGAGGTGGACTCTGTGATAAGGGAGGGCGGCCGATGGAAATTGCAACGTCGACAGAGGCGGCTGTGGTTGTTAAGGGTGCGATTGAGCCACCAGAGAATGGCTTGCTTAGGTCAGACGACGGGTTGGCTATGGAGGAAGAGCGTAGGGCTATGATTTCGGCGGATCTGGGCGTTGAGATGGGTGGCAAGGTGGCAGTGGAGGAGACGGTGGTTGCCCCGGTTTTCTCGGCGGGAAACCCTAGTTTGAAACTAGGGTTGACCGAGTTGGGAGCTGAATTGGCGGTGAGTGAGTTGACCGAGCTTGGGCTTTCTTTTGGGCCAGCTTTTGGGGTTTGTGAGGGCATTGTGCATTCTAGGCTAAAGAGGAAAGAGGTTCCGGTTGTTGGCCCGGTGACTTATAAGAGGAAGATTGGACGCAAGCTTAGAAGCAAGAACAAGAACAAGGATGTGGCGTTGGATCTGGTGACTTGCAAGAGGAAGATCGGACGTCCGCTTGGAAGCAAGAACAAAAAGCCGCGTTTGGAGAAGCAATCTGAAGAGCCTTCATCTATAAGTTTTGTTCCTCTGCCTGCACCTCCAAGCCCTAGTCTAAAGGGCAAAGAGCGTGATTGCCTAGGTTATAGGCTGATTTGTGGTGATATGAGAGCTGAAATGTGTAGTGAGGGTGGTACCTGCACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

397

Amino Acids

43.49

Weight (kDa)

8.98

Isoelectric Point (pI)

44.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 14 - 66 8.9e-09 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 909
AatII GACGTC 1 cut(s) 1000
Acc65I GGTACC 1 cut(s) 1178
AccB1I GGYRCC 1 cut(s) 1178
AccB7I CCANNNNNTGG 2 cut(s) 608, 836
AccI GTMKAC 1 cut(s) 560
AccII CGCG 1 cut(s) 1027
AciI CCGC 9 cut(s) 38, 209, 538, 569, 671, 740, 791, 1001, 1025
AclWI GGATC 8 cut(s) 178, 329, 342, 397, 410, 488, 681, 975
AcoI YGGCCR 2 cut(s) 505, 539
AcuI CTGAAG 1 cut(s) 1065
AcvI CACGTG 2 cut(s) 464, 1188
AcyI GRCGYC 1 cut(s) 997
AfaI GTAC 2 cut(s) 348, 1180
AfiI CCNNNNNNNGG 4 cut(s) 608, 813, 836, 893
AflII CTTAAG 1 cut(s) 59
AflIII ACRYGT 1 cut(s) 461
AgsI TTSAA 4 cut(s) 115, 166, 239, 757
AhdI GACNNNNNGTC 1 cut(s) 430
AloI GAACNNNNNNTCC 2 cut(s) 309, 341
AluBI AGCT 5 cut(s) 782, 811, 833, 931, 1157
AluI AGCT 5 cut(s) 782, 811, 833, 931, 1157
Alw26I GTCTC 1 cut(s) 707
AlwI GGATC 8 cut(s) 178, 329, 342, 397, 410, 488, 681, 975
AoxI GGCC 5 cut(s) 206, 505, 539, 827, 895
ApeKI GCWGC 3 cut(s) 19, 41, 44
Asp700I GAANNNNTTC 1 cut(s) 288
Asp718I GGTACC 1 cut(s) 1178
AspA2I CCTAGG 1 cut(s) 1123
AspLEI GCGC 2 cut(s) 267, 396
AspS9I GGNCC 3 cut(s) 152, 827, 896
AsuC2I CCSGG 4 cut(s) 93, 488, 728, 899
AsuHPI GGTGA 4 cut(s) 805, 913, 985, 1157
AvaII GGWCC 1 cut(s) 152
AvrII CCTAGG 1 cut(s) 1123
BalI TGGCCA 1 cut(s) 507
BamHI GGATCC 2 cut(s) 334, 402
BanI GGYRCC 1 cut(s) 1178
BbrPI CACGTG 2 cut(s) 464, 1188
BbvI GCAGC 3 cut(s) 6, 28, 31
BccI CCATC 3 cut(s) 7, 538, 682
BceAI ACGGC 1 cut(s) 51
BcgI CGANNNNNNTGC 1 cut(s) 35
BclI TGATCA 1 cut(s) 75
BcnI CCSGG 4 cut(s) 93, 488, 728, 899
BcoDI GTCTC 1 cut(s) 707
BfaI CTAG 5 cut(s) 750, 761, 864, 1095, 1124
BfrI CTTAAG 1 cut(s) 59
BglII AGATCT 3 cut(s) 219, 438, 448
BisI GCNGC 8 cut(s) 20, 39, 42, 45, 209, 539, 570, 1025
BlnI CCTAGG 1 cut(s) 1123
BlsI GCNGC 8 cut(s) 21, 40, 43, 46, 210, 540, 571, 1026
Bme1390I CCNGG 4 cut(s) 93, 488, 728, 899
Bme18I GGWCC 1 cut(s) 152
BmeRI GACNNNNNGTC 1 cut(s) 430
BmgT120I GGNCC 3 cut(s) 152, 827, 896
BmiI GGNNCC 6 cut(s) 90, 319, 336, 404, 885, 1180
BmrFI CCNGG 4 cut(s) 93, 488, 728, 899
BmsI GCATC 1 cut(s) 238
BplI GAGNNNNNCTC 2 cut(s) 504, 536
Bpu10I CCTNAGC 1 cut(s) 617
BpuEI CTTGAG 1 cut(s) 473
BpuMI CCSGG 4 cut(s) 93, 488, 728, 899
BsaAI YACGTR 2 cut(s) 464, 1188
BsaHI GRCGYC 1 cut(s) 997
BsaJI CCNNGG 6 cut(s) 142, 155, 313, 508, 726, 1123
BsaWI WCCGGW 1 cut(s) 886
Bsc4I CCNNNNNNNGG 4 cut(s) 608, 813, 836, 893
Bse118I RCCGGY 2 cut(s) 22, 257
Bse3DI GCAATG 1 cut(s) 481
BseDI CCNNGG 6 cut(s) 142, 155, 313, 508, 726, 1123
BseGI GGATG 2 cut(s) 394, 961
BseLI CCNNNNNNNGG 4 cut(s) 608, 813, 836, 893
BseMI GCAATG 1 cut(s) 481
BseMII CTCAG 2 cut(s) 264, 456
BseRI GAGGAG 2 cut(s) 101, 725
BseX3I CGGCCG 1 cut(s) 539
BseXI GCAGC 3 cut(s) 6, 28, 31
BseYI CCCAGC 1 cut(s) 406
BsgI GTGCAG 2 cut(s) 1065, 1168
Bsh1236I CGCG 1 cut(s) 1027
Bsh1285I CGRYCG 1 cut(s) 542
BshFI GGCC 5 cut(s) 208, 507, 541, 829, 897
BshNI GGYRCC 1 cut(s) 1178
BsiEI CGRYCG 1 cut(s) 542
BsiSI CCGG 8 cut(s) 23, 92, 258, 411, 487, 728, 887, 899
BslI CCNNNNNNNGG 4 cut(s) 608, 813, 836, 893
BsmAI GTCTC 1 cut(s) 707
BsmBI CGTCTC 1 cut(s) 707
BsmI GAATGC 1 cut(s) 859
BsnI GGCC 5 cut(s) 208, 507, 541, 829, 897
Bsp19I CCATGG 1 cut(s) 508
BspACI CCGC 9 cut(s) 38, 209, 538, 569, 671, 740, 791, 1001, 1025
BspANI GGCC 5 cut(s) 208, 507, 541, 829, 897
BspCNI CTCAG 2 cut(s) 263, 455
BspFNI CGCG 1 cut(s) 1027
BspLI GGNNCC 6 cut(s) 90, 319, 336, 404, 885, 1180
BspPI GGATC 8 cut(s) 178, 329, 342, 397, 410, 488, 681, 975
BspQI GCTCTTC 2 cut(s) 642, 1041
BspT107I GGYRCC 1 cut(s) 1178
BspTI CTTAAG 1 cut(s) 59
BsrDI GCAATG 1 cut(s) 481
BsrFI RCCGGY 2 cut(s) 22, 257
BssAI RCCGGY 2 cut(s) 22, 257
BssECI CCNNGG 6 cut(s) 142, 155, 313, 508, 726, 1123
BssNI GRCGYC 1 cut(s) 997
BssT1I CCWWGG 5 cut(s) 142, 155, 313, 508, 1123
Bst4CI ACNGT 2 cut(s) 346, 718
Bst6I CTCTTC 4 cut(s) 78, 409, 642, 1041
BstACI GRCGYC 1 cut(s) 997
BstAFI CTTAAG 1 cut(s) 59
BstBAI YACGTR 2 cut(s) 464, 1188
BstC8I GCNNGC 5 cut(s) 186, 614, 831, 929, 1080
BstDEI CTNAG 5 cut(s) 6, 250, 442, 617, 932
BstDSI CCRYGG 1 cut(s) 508
BstF5I GGATG 2 cut(s) 394, 961
BstFNI CGCG 1 cut(s) 1027
BstHHI GCGC 2 cut(s) 267, 396
BstMAI GTCTC 1 cut(s) 707
BstMCI CGRYCG 1 cut(s) 542
BstMWI GCNNNNNNNGC 5 cut(s) 16, 44, 504, 788, 865
BstSCI CCNGG 4 cut(s) 91, 486, 726, 897
BstUI CGCG 1 cut(s) 1027
BstV1I GCAGC 3 cut(s) 6, 28, 31
BstX2I RGATCY 8 cut(s) 219, 334, 402, 438, 448, 480, 673, 967
BstXI CCANNNNNNTGG 1 cut(s) 515
BstYI RGATCY 8 cut(s) 219, 334, 402, 438, 448, 480, 673, 967
BstZI CGGCCG 1 cut(s) 539
BsuRI GGCC 5 cut(s) 208, 507, 541, 829, 897
BtgI CCRYGG 1 cut(s) 508
BtgZI GCGATG 1 cut(s) 287
BtsCI GGATG 2 cut(s) 394, 961
BtsI GCAGTG 1 cut(s) 711
BtsIMutI CAGTG 2 cut(s) 85, 711
Cac8I GCNNGC 5 cut(s) 186, 614, 831, 929, 1080
CfoI GCGC 2 cut(s) 267, 396
Cfr10I RCCGGY 2 cut(s) 22, 257
Cfr13I GGNCC 3 cut(s) 152, 827, 896
CseI GACGC 1 cut(s) 933
Csp6I GTAC 2 cut(s) 347, 1179
CviAII CATG 2 cut(s) 385, 509
CviQI GTAC 2 cut(s) 347, 1179
DdeI CTNAG 5 cut(s) 6, 250, 442, 617, 932
DriI GACNNNNNGTC 1 cut(s) 430
EaeI YGGCCR 2 cut(s) 505, 539
EagI CGGCCG 1 cut(s) 539
Eam1104I CTCTTC 4 cut(s) 78, 409, 642, 1041
Eam1105I GACNNNNNGTC 1 cut(s) 430
EarI CTCTTC 4 cut(s) 78, 409, 642, 1041
EciI GGCGGA 1 cut(s) 686
EclXI CGGCCG 1 cut(s) 539
Eco130I CCWWGG 5 cut(s) 142, 155, 313, 508, 1123
Eco47I GGWCC 1 cut(s) 152
Eco52I CGGCCG 1 cut(s) 539
Eco57I CTGAAG 1 cut(s) 1065
Eco72I CACGTG 2 cut(s) 464, 1188
EcoT14I CCWWGG 5 cut(s) 142, 155, 313, 508, 1123
ErhI CCWWGG 5 cut(s) 142, 155, 313, 508, 1123
Esp3I CGTCTC 1 cut(s) 707
FaeI CATG 2 cut(s) 388, 512
FatI CATG 2 cut(s) 384, 508
FauI CCCGC 1 cut(s) 733
FbaI TGATCA 1 cut(s) 75
FblI GTMKAC 1 cut(s) 560
Fnu4HI GCNGC 8 cut(s) 20, 39, 42, 45, 209, 539, 570, 1025
FokI GGATG 2 cut(s) 401, 968
Fsp4HI GCNGC 8 cut(s) 20, 39, 42, 45, 209, 539, 570, 1025
FspBI CTAG 5 cut(s) 750, 761, 864, 1095, 1124
GlaI GCGC 2 cut(s) 266, 395
GluI GCNGC 8 cut(s) 20, 39, 42, 45, 209, 539, 570, 1025
GsaI CCCAGC 1 cut(s) 410
HaeIII GGCC 5 cut(s) 208, 507, 541, 829, 897
HapII CCGG 8 cut(s) 23, 92, 258, 411, 487, 728, 887, 899
HgaI GACGC 1 cut(s) 933
HhaI GCGC 2 cut(s) 267, 396
Hin1I GRCGYC 1 cut(s) 997
Hin1II CATG 2 cut(s) 388, 512
Hin6I GCGC 2 cut(s) 265, 394
HinP1I GCGC 2 cut(s) 265, 394
HincII GTYRAC 3 cut(s) 561, 768, 804
HindII GTYRAC 3 cut(s) 561, 768, 804
HindIII AAGCTT 1 cut(s) 929
HinfI GANTC 3 cut(s) 55, 96, 519
HpaII CCGG 8 cut(s) 23, 92, 258, 411, 487, 728, 887, 899
HphI GGTGA 4 cut(s) 805, 913, 985, 1157
Hpy166II GTNNAC 7 cut(s) 30, 152, 459, 518, 561, 768, 804
Hpy188I TCNGA 4 cut(s) 436, 625, 995, 1045
Hpy188III TCNNGA 3 cut(s) 31, 115, 452
Hpy8I GTNNAC 7 cut(s) 30, 152, 459, 518, 561, 768, 804
Hpy99I CGWCG 4 cut(s) 37, 436, 562, 632
HpyAV CCTTC 2 cut(s) 61, 1062
HpyCH4III ACNGT 2 cut(s) 346, 718
HpyCH4IV ACGT 4 cut(s) 463, 557, 997, 1187
HpyCH4V TGCA 7 cut(s) 229, 474, 554, 859, 981, 1082, 1185
HpyF10VI GCNNNNNNNGC 5 cut(s) 16, 44, 504, 788, 865
HpyF3I CTNAG 5 cut(s) 6, 250, 442, 617, 932
HpySE526I ACGT 4 cut(s) 463, 557, 997, 1187
Hsp92I GRCGYC 1 cut(s) 997
Hsp92II CATG 2 cut(s) 388, 512
HspAI GCGC 2 cut(s) 265, 394
KpnI GGTACC 1 cut(s) 1182
Ksp22I TGATCA 1 cut(s) 75
LguI GCTCTTC 2 cut(s) 642, 1041
LmnI GCTCC 2 cut(s) 88, 779
Lsp1109I GCAGC 3 cut(s) 6, 28, 31
LweI GCATC 1 cut(s) 238
MaeI CTAG 5 cut(s) 750, 761, 864, 1095, 1124
MaeII ACGT 4 cut(s) 463, 557, 997, 1187
MaeIII GTNAC 2 cut(s) 901, 973
MboII GAAGA 9 cut(s) 95, 154, 367, 370, 426, 659, 928, 1000, 1058
MflI RGATCY 8 cut(s) 219, 334, 402, 438, 448, 480, 673, 967
MlsI TGGCCA 1 cut(s) 507
MluCI AATT 3 cut(s) 300, 549, 785
MluNI TGGCCA 1 cut(s) 507
MlyI GAGTC 1 cut(s) 513
MmeI TCCRAC 3 cut(s) 391, 414, 945
Mox20I TGGCCA 1 cut(s) 507
MroXI GAANNNNTTC 1 cut(s) 288
MscI TGGCCA 1 cut(s) 507
MseI TTAA 2 cut(s) 60, 582
MslI CAYNNNNRTG 2 cut(s) 389, 513
Msp20I TGGCCA 1 cut(s) 507
MspCI CTTAAG 1 cut(s) 59
MspI CCGG 8 cut(s) 23, 92, 258, 411, 487, 728, 887, 899
MspR9I CCNGG 4 cut(s) 93, 488, 728, 899
Mva1269I GAATGC 1 cut(s) 859
MvnI CGCG 1 cut(s) 1027
MwoI GCNNNNNNNGC 5 cut(s) 16, 44, 504, 788, 865
NciI CCSGG 4 cut(s) 93, 488, 728, 899
NcoI CCATGG 1 cut(s) 508
NlaIII CATG 2 cut(s) 388, 512
NlaIV GGNNCC 6 cut(s) 90, 319, 336, 404, 885, 1180
NmeAIII GCCGAG 1 cut(s) 716
NmuCI GTSAC 2 cut(s) 901, 973
PciSI GCTCTTC 2 cut(s) 642, 1041
PctI GAATGC 1 cut(s) 859
PdmI GAANNNNTTC 1 cut(s) 288
PfeI GAWTC 2 cut(s) 55, 96
PflMI CCANNNNNTGG 2 cut(s) 608, 836
PkrI GCNGC 8 cut(s) 21, 40, 43, 46, 210, 540, 571, 1026
PleI GAGTC 1 cut(s) 513
PmaCI CACGTG 2 cut(s) 464, 1188
PmlI CACGTG 2 cut(s) 464, 1188
PpsI GAGTC 1 cut(s) 513
Ppu21I YACGTR 2 cut(s) 464, 1188
PsiI TTATAA 1 cut(s) 909
PspCI CACGTG 2 cut(s) 464, 1188
PspFI CCCAGC 1 cut(s) 406
PspN4I GGNNCC 6 cut(s) 90, 319, 336, 404, 885, 1180
PspPI GGNCC 3 cut(s) 152, 827, 896
PsuI RGATCY 8 cut(s) 219, 334, 402, 438, 448, 480, 673, 967
RsaI GTAC 2 cut(s) 348, 1180
RsaNI GTAC 2 cut(s) 347, 1179
RseI CAYNNNNRTG 2 cut(s) 389, 513
SalI GTCGAC 1 cut(s) 559
SapI GCTCTTC 2 cut(s) 642, 1041
SaqAI TTAA 2 cut(s) 60, 582
SatI GCNGC 8 cut(s) 20, 39, 42, 45, 209, 539, 570, 1025
Sau96I GGNCC 3 cut(s) 152, 827, 896
SchI GAGTC 1 cut(s) 513
ScrFI CCNGG 4 cut(s) 93, 488, 728, 899
SfaNI GCATC 1 cut(s) 238
SinI GGWCC 1 cut(s) 152
SmiMI CAYNNNNRTG 2 cut(s) 389, 513
SmlI CTYRAG 2 cut(s) 59, 452
SmoI CTYRAG 2 cut(s) 59, 452
Sse9I AATT 3 cut(s) 300, 549, 785
SsiI CCGC 9 cut(s) 38, 209, 538, 569, 671, 740, 791, 1001, 1025
SspMI CTAG 5 cut(s) 750, 761, 864, 1095, 1124
StyD4I CCNGG 4 cut(s) 91, 486, 726, 897
StyI CCWWGG 5 cut(s) 142, 155, 313, 508, 1123
TaaI ACNGT 2 cut(s) 346, 718
TaiI ACGT 4 cut(s) 466, 560, 1000, 1190
TaqI TCGA 2 cut(s) 298, 560
TaqII GACCGA 2 cut(s) 785, 821
TasI AATT 3 cut(s) 300, 549, 785
TauI GCSGC 5 cut(s) 41, 211, 541, 572, 1027
TfiI GAWTC 2 cut(s) 55, 96
Tru1I TTAA 2 cut(s) 60, 582
Tru9I TTAA 2 cut(s) 60, 582
TscAI CASTG 2 cut(s) 85, 711
TseFI GTSAC 2 cut(s) 901, 973
TseI GCWGC 3 cut(s) 19, 41, 44
Tsp45I GTSAC 2 cut(s) 901, 973
TspDTI ATGAA 2 cut(s) 368, 1044
TspRI CASTG 2 cut(s) 85, 711
Van91I CCANNNNNTGG 2 cut(s) 608, 836
Vha464I CTTAAG 1 cut(s) 59
VpaK11BI GGWCC 1 cut(s) 152
XmaJI CCTAGG 1 cut(s) 1123
XmiI GTMKAC 1 cut(s) 560
XmnI GAANNNNTTC 1 cut(s) 288
XspI CTAG 5 cut(s) 750, 761, 864, 1095, 1124
ZraI GACGTC 1 cut(s) 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.