Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 239 |
| Acc16I | TGCGCA | 2 cut(s) | 380, 392 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 165 |
| AccBSI | CCGCTC | 1 cut(s) | 335 |
| AciI | CCGC | 5 cut(s) | 106, 333, 458, 624, 665 |
| AclWI | GGATC | 2 cut(s) | 184, 524 |
| AcyI | GRCGYC | 1 cut(s) | 716 |
| AfaI | GTAC | 2 cut(s) | 575, 691 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 165, 199, 441 |
| AflII | CTTAAG | 1 cut(s) | 350 |
| AgsI | TTSAA | 3 cut(s) | 224, 229, 543 |
| AluBI | AGCT | 2 cut(s) | 404, 568 |
| AluI | AGCT | 2 cut(s) | 404, 568 |
| Alw21I | GWGCWC | 2 cut(s) | 135, 570 |
| Alw26I | GTCTC | 1 cut(s) | 5 |
| AlwI | GGATC | 2 cut(s) | 184, 524 |
| AoxI | GGCC | 2 cut(s) | 313, 330 |
| ApeKI | GCWGC | 1 cut(s) | 599 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 197, 229 |
| AspLEI | GCGC | 2 cut(s) | 381, 393 |
| AspS9I | GGNCC | 4 cut(s) | 266, 432, 472, 487 |
| AsuC2I | CCSGG | 1 cut(s) | 476 |
| AsuHPI | GGTGA | 1 cut(s) | 379 |
| AvaII | GGWCC | 4 cut(s) | 266, 432, 472, 487 |
| BanII | GRGCYC | 1 cut(s) | 570 |
| Bbv12I | GWGCWC | 2 cut(s) | 135, 570 |
| BbvI | GCAGC | 1 cut(s) | 586 |
| BccI | CCATC | 4 cut(s) | 145, 305, 351, 646 |
| BceAI | ACGGC | 3 cut(s) | 165, 533, 703 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 488, 522 |
| BclI | TGATCA | 1 cut(s) | 448 |
| BcnI | CCSGG | 1 cut(s) | 476 |
| BcoDI | GTCTC | 1 cut(s) | 5 |
| BfmI | CTRYAG | 1 cut(s) | 277 |
| BfrI | CTTAAG | 1 cut(s) | 350 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 60 |
| BisI | GCNGC | 4 cut(s) | 107, 333, 600, 665 |
| BlsI | GCNGC | 4 cut(s) | 108, 334, 601, 666 |
| Bme1390I | CCNGG | 1 cut(s) | 476 |
| Bme18I | GGWCC | 4 cut(s) | 266, 432, 472, 487 |
| BmgT120I | GGNCC | 4 cut(s) | 266, 432, 472, 487 |
| BmiI | GGNNCC | 5 cut(s) | 21, 267, 433, 474, 488 |
| BmrFI | CCNGG | 1 cut(s) | 476 |
| BmsI | GCATC | 3 cut(s) | 61, 66, 390 |
| BpmI | CTGGAG | 1 cut(s) | 554 |
| BpuEI | CTTGAG | 1 cut(s) | 311 |
| BpuMI | CCSGG | 1 cut(s) | 476 |
| BsaHI | GRCGYC | 1 cut(s) | 716 |
| BsaJI | CCNNGG | 2 cut(s) | 269, 586 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 34 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 165, 199, 441 |
| Bse1I | ACTGG | 1 cut(s) | 571 |
| Bse3DI | GCAATG | 1 cut(s) | 400 |
| BseDI | CCNNGG | 2 cut(s) | 269, 586 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 165, 199, 441 |
| BseMI | GCAATG | 1 cut(s) | 400 |
| BseMII | CTCAG | 1 cut(s) | 698 |
| BseNI | ACTGG | 1 cut(s) | 571 |
| BseRI | GAGGAG | 2 cut(s) | 23, 215 |
| BseXI | GCAGC | 1 cut(s) | 586 |
| BsgI | GTGCAG | 2 cut(s) | 12, 482 |
| BshFI | GGCC | 2 cut(s) | 315, 332 |
| BsiHKAI | GWGCWC | 2 cut(s) | 135, 570 |
| BsiSI | CCGG | 1 cut(s) | 476 |
| BslFI | GGGAC | 2 cut(s) | 183, 445 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 165, 199, 441 |
| BsmAI | GTCTC | 1 cut(s) | 5 |
| BsmBI | CGTCTC | 1 cut(s) | 5 |
| BsmFI | GGGAC | 2 cut(s) | 183, 445 |
| BsnI | GGCC | 2 cut(s) | 315, 332 |
| Bsp1286I | GDGCHC | 2 cut(s) | 135, 570 |
| Bsp143I | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| Bsp19I | CCATGG | 2 cut(s) | 269, 586 |
| BspACI | CCGC | 5 cut(s) | 106, 333, 458, 624, 665 |
| BspANI | GGCC | 2 cut(s) | 315, 332 |
| BspCNI | CTCAG | 1 cut(s) | 699 |
| BspLI | GGNNCC | 5 cut(s) | 21, 267, 433, 474, 488 |
| BspPI | GGATC | 2 cut(s) | 184, 524 |
| BspTI | CTTAAG | 1 cut(s) | 350 |
| BsrBI | CCGCTC | 1 cut(s) | 335 |
| BsrDI | GCAATG | 1 cut(s) | 400 |
| BsrI | ACTGG | 1 cut(s) | 571 |
| BssECI | CCNNGG | 2 cut(s) | 269, 586 |
| BssMI | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| BssNI | GRCGYC | 1 cut(s) | 716 |
| BssT1I | CCWWGG | 2 cut(s) | 269, 586 |
| Bst4CI | ACNGT | 3 cut(s) | 16, 114, 683 |
| BstACI | GRCGYC | 1 cut(s) | 716 |
| BstAFI | CTTAAG | 1 cut(s) | 350 |
| BstC8I | GCNNGC | 2 cut(s) | 300, 669 |
| BstDEI | CTNAG | 3 cut(s) | 117, 173, 707 |
| BstDSI | CCRYGG | 2 cut(s) | 269, 586 |
| BstHHI | GCGC | 2 cut(s) | 381, 393 |
| BstKTI | GATC | 8 cut(s) | 156, 192, 325, 417, 451, 519, 697, 713 |
| BstMAI | GTCTC | 1 cut(s) | 5 |
| BstMBI | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 26, 60 |
| BstSCI | CCNGG | 1 cut(s) | 474 |
| BstSFI | CTRYAG | 1 cut(s) | 277 |
| BstV1I | GCAGC | 1 cut(s) | 586 |
| BstX2I | RGATCY | 1 cut(s) | 516 |
| BstYI | RGATCY | 1 cut(s) | 516 |
| BsuRI | GGCC | 2 cut(s) | 315, 332 |
| BtgI | CCRYGG | 2 cut(s) | 269, 586 |
| BtgZI | GCGATG | 2 cut(s) | 89, 367 |
| BtsI | GCAGTG | 2 cut(s) | 659, 678 |
| BtsIMutI | CAGTG | 2 cut(s) | 659, 678 |
| Cac8I | GCNNGC | 2 cut(s) | 300, 669 |
| CfoI | GCGC | 2 cut(s) | 381, 393 |
| Cfr13I | GGNCC | 4 cut(s) | 266, 432, 472, 487 |
| Csp6I | GTAC | 2 cut(s) | 574, 690 |
| CviAII | CATG | 6 cut(s) | 80, 270, 289, 500, 587, 620 |
| CviQI | GTAC | 2 cut(s) | 574, 690 |
| DdeI | CTNAG | 3 cut(s) | 117, 173, 707 |
| DpnI | GATC | 8 cut(s) | 155, 191, 324, 416, 450, 518, 696, 712 |
| DpnII | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 239 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 239 |
| EciI | GGCGGA | 1 cut(s) | 639 |
| Ecl136II | GAGCTC | 1 cut(s) | 568 |
| Eco130I | CCWWGG | 2 cut(s) | 269, 586 |
| Eco24I | GRGCYC | 1 cut(s) | 570 |
| Eco47I | GGWCC | 4 cut(s) | 266, 432, 472, 487 |
| Eco53kI | GAGCTC | 1 cut(s) | 568 |
| EcoICRI | GAGCTC | 1 cut(s) | 568 |
| EcoO109I | RGGNCCY | 2 cut(s) | 432, 472 |
| EcoT14I | CCWWGG | 2 cut(s) | 269, 586 |
| EcoT22I | ATGCAT | 1 cut(s) | 81 |
| EcoT38I | GRGCYC | 1 cut(s) | 570 |
| ErhI | CCWWGG | 2 cut(s) | 269, 586 |
| Esp3I | CGTCTC | 1 cut(s) | 5 |
| FaeI | CATG | 6 cut(s) | 83, 273, 292, 503, 590, 623 |
| FaqI | GGGAC | 2 cut(s) | 183, 445 |
| FatI | CATG | 6 cut(s) | 79, 269, 288, 499, 586, 619 |
| FbaI | TGATCA | 1 cut(s) | 448 |
| Fnu4HI | GCNGC | 4 cut(s) | 107, 333, 600, 665 |
| FriOI | GRGCYC | 1 cut(s) | 570 |
| Fsp4HI | GCNGC | 4 cut(s) | 107, 333, 600, 665 |
| FspI | TGCGCA | 2 cut(s) | 380, 392 |
| GlaI | GCGC | 2 cut(s) | 380, 392 |
| GluI | GCNGC | 4 cut(s) | 107, 333, 600, 665 |
| GsuI | CTGGAG | 1 cut(s) | 554 |
| HaeIII | GGCC | 2 cut(s) | 315, 332 |
| HapII | CCGG | 1 cut(s) | 476 |
| HhaI | GCGC | 2 cut(s) | 381, 393 |
| Hin1I | GRCGYC | 1 cut(s) | 716 |
| Hin1II | CATG | 6 cut(s) | 83, 273, 292, 503, 590, 623 |
| Hin6I | GCGC | 2 cut(s) | 379, 391 |
| HinP1I | GCGC | 2 cut(s) | 379, 391 |
| HindIII | AAGCTT | 1 cut(s) | 402 |
| HinfI | GANTC | 2 cut(s) | 83, 253 |
| HpaII | CCGG | 1 cut(s) | 476 |
| HphI | GGTGA | 1 cut(s) | 379 |
| Hpy188I | TCNGA | 7 cut(s) | 194, 322, 414, 419, 483, 513, 679 |
| Hpy188III | TCNNGA | 1 cut(s) | 145 |
| Hpy99I | CGWCG | 3 cut(s) | 151, 513, 718 |
| HpyAV | CCTTC | 8 cut(s) | 33, 34, 107, 115, 364, 414, 463, 680 |
| HpyCH4III | ACNGT | 3 cut(s) | 16, 114, 683 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 79, 463, 499 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 26, 60 |
| HpyF3I | CTNAG | 3 cut(s) | 117, 173, 707 |
| Hsp92I | GRCGYC | 1 cut(s) | 716 |
| Hsp92II | CATG | 6 cut(s) | 83, 273, 292, 503, 590, 623 |
| HspAI | GCGC | 2 cut(s) | 379, 391 |
| Ksp22I | TGATCA | 1 cut(s) | 448 |
| Kzo9I | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| LmnI | GCTCC | 4 cut(s) | 25, 138, 345, 573 |
| LpnPI | CCDG | 8 cut(s) | 220, 246, 284, 489, 505, 515, 584, 653 |
| Lsp1109I | GCAGC | 1 cut(s) | 586 |
| LweI | GCATC | 3 cut(s) | 61, 66, 390 |
| MalI | GATC | 8 cut(s) | 155, 191, 324, 416, 450, 518, 696, 712 |
| MbiI | CCGCTC | 1 cut(s) | 335 |
| MboI | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| MboII | GAAGA | 1 cut(s) | 80 |
| MflI | RGATCY | 1 cut(s) | 516 |
| MhlI | GDGCHC | 2 cut(s) | 135, 570 |
| MluCI | AATT | 2 cut(s) | 224, 283 |
| MmeI | TCCRAC | 4 cut(s) | 217, 491, 627, 657 |
| MnlI | CCTC | 8 cut(s) | 193, 196, 459, 477, 507, 620, 636, 649 |
| Mph1103I | ATGCAT | 1 cut(s) | 81 |
| MseI | TTAA | 2 cut(s) | 351, 407 |
| MslI | CAYNNNNRTG | 1 cut(s) | 386 |
| MspA1I | CMGCKG | 1 cut(s) | 667 |
| MspCI | CTTAAG | 1 cut(s) | 350 |
| MspI | CCGG | 1 cut(s) | 476 |
| MspR9I | CCNGG | 1 cut(s) | 476 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 26, 60 |
| NciI | CCSGG | 1 cut(s) | 476 |
| NcoI | CCATGG | 2 cut(s) | 269, 586 |
| NdeII | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| NlaIII | CATG | 6 cut(s) | 83, 273, 292, 503, 590, 623 |
| NlaIV | GGNNCC | 5 cut(s) | 21, 267, 433, 474, 488 |
| NsbI | TGCGCA | 2 cut(s) | 380, 392 |
| NsiI | ATGCAT | 1 cut(s) | 81 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 213 |
| PfeI | GAWTC | 2 cut(s) | 83, 253 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 165 |
| PkrI | GCNGC | 4 cut(s) | 108, 334, 601, 666 |
| PpuMI | RGGWCCY | 2 cut(s) | 432, 472 |
| Psp124BI | GAGCTC | 1 cut(s) | 570 |
| Psp5II | RGGWCCY | 2 cut(s) | 432, 472 |
| PspN4I | GGNNCC | 5 cut(s) | 21, 267, 433, 474, 488 |
| PspPI | GGNCC | 4 cut(s) | 266, 432, 472, 487 |
| PspPPI | RGGWCCY | 2 cut(s) | 432, 472 |
| PsuI | RGATCY | 1 cut(s) | 516 |
| RsaI | GTAC | 2 cut(s) | 575, 691 |
| RsaNI | GTAC | 2 cut(s) | 574, 690 |
| RseI | CAYNNNNRTG | 1 cut(s) | 386 |
| SacI | GAGCTC | 1 cut(s) | 570 |
| SaqAI | TTAA | 2 cut(s) | 351, 407 |
| SatI | GCNGC | 4 cut(s) | 107, 333, 600, 665 |
| Sau3AI | GATC | 8 cut(s) | 153, 189, 322, 414, 448, 516, 694, 710 |
| Sau96I | GGNCC | 4 cut(s) | 266, 432, 472, 487 |
| ScrFI | CCNGG | 1 cut(s) | 476 |
| SduI | GDGCHC | 2 cut(s) | 135, 570 |
| SfaNI | GCATC | 3 cut(s) | 61, 66, 390 |
| SfcI | CTRYAG | 1 cut(s) | 277 |
| SinI | GGWCC | 4 cut(s) | 266, 432, 472, 487 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 386 |
| SmlI | CTYRAG | 2 cut(s) | 326, 350 |
| SmoI | CTYRAG | 2 cut(s) | 326, 350 |
| Sse9I | AATT | 2 cut(s) | 224, 283 |
| SsiI | CCGC | 5 cut(s) | 106, 333, 458, 624, 665 |
| SstI | GAGCTC | 1 cut(s) | 570 |
| StyD4I | CCNGG | 1 cut(s) | 474 |
| StyI | CCWWGG | 2 cut(s) | 269, 586 |
| TaaI | ACNGT | 3 cut(s) | 16, 114, 683 |
| TaqI | TCGA | 2 cut(s) | 146, 713 |
| TasI | AATT | 2 cut(s) | 224, 283 |
| TauI | GCSGC | 3 cut(s) | 109, 335, 667 |
| TfiI | GAWTC | 2 cut(s) | 83, 253 |
| Tru1I | TTAA | 2 cut(s) | 351, 407 |
| Tru9I | TTAA | 2 cut(s) | 351, 407 |
| TscAI | CASTG | 2 cut(s) | 666, 678 |
| TseI | GCWGC | 1 cut(s) | 599 |
| TspGWI | ACGGA | 1 cut(s) | 479 |
| TspRI | CASTG | 2 cut(s) | 666, 678 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 165 |
| Vha464I | CTTAAG | 1 cut(s) | 350 |
| VpaK11BI | GGWCC | 4 cut(s) | 266, 432, 472, 487 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 295 |
| Zsp2I | ATGCAT | 1 cut(s) | 81 |