Rmu_sc0010439.1_g000001

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010439.1
OG0000123
Physical Location & Seq
Forward (+)
1 .. 6488
6488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010439.1_g000001.1.cds

Sequence Viewer

Length: 2201 bp
ctgctgttgttgcaagtcagtccaccataacagcaactttttcactaatcaagcaggcgcttgcacttggctgtttcccaagggtcaaagttgtacatacatcaaagaagtaccgtcaccacatatatattccagaagttaattggcttgttatgattctctgcattgttgtaacagctggctttaaaaatcaaaaccaaattggtaacgcctccgggacggcggtttgtatagtcatgttggtaaccacattgcttatgattttggtcatgatattggtctggcgctgccatttgattcttgtcctcctcttcactggtttatcactactaatagagggcacttacttctctgctgtactcctcaaggtcaatcaaggtggctgggttcctcttgtgatctcagcagccttctttattgttatgtatgcttggcattatggtacagtaaaacgttacgagattgaagtccacagtaaggtctcgatggcatggattctcggacttggtcccagtttaggattggttcgtgtacctgggataggccttgtgtacactgagctagcaagtggagtgcctcgcatcttttctcacttgatcaccaacctacccgccatccataatgttgttgtctttgtctgtgtgaagtaccttcctgtctacacagtccaagaagaagaaaggttccttgtaaagcggattggcccaaagaatttccacatgtttcgctgcgttgcaagatatggctataaagacatccacacaaaagatgacgattttgagaaaaaactctttgccagtcttttcttgtttctcctggtagagtcattggcagagccatctactggctctgatatatctagtttaattggtcagcaaactaggcaatcaagaagtagcacgtccaatagtatcagcaacataccttactccactgcagacctgtcaattcagtcgaatgactcaatcgtcccgggtggttctccacttcatgaaaacaacactttgacatcctctgatattcagccaagcagccaggtggtcgaagacgagattgatgagactgagttcttgaacaactgtagagatgtaggggtggtgcacatacttggaaacactgtaaaaccggtggttatcccatccttcgtggcggcgatgtccggagtgtggaggctaaaggagagggttcggatccgtgaggaggaggtagggatcttcgtattccaatttaaggagcaggcagtgaagcatcgtgttcttcatggaggcccatggtattttagcaattcgatgcttttgttggctgactatgacggtgtagggactctggcggaggctcctttgcactttctggaggtgtgggtggcggtgacgggcctgagagtggctatgcatactgtgcagattctcaccttgcttggcaacatgttgggcactttcgtgaaggctgatcatgtagcgttgcaaaggaaggaggctactcagaggatctgtttggtccatgatgtgcgccaacgagtctgggctcggagaacgatctgtttctcgccggcggtttcggtagagctggagttccgatatgaaaagtgcctggggatctgcaaggggtgtggtttcttcacccatgttggaggggattgtgaccgaaagtttttacagaatgagatgttgccgtccaatggtaccgtggcaccgtcgtcgtctcttgatgtggtggaggcgctgcagactgggtcgacgattctggtaccggcgttgggctctggagccgtgcaagtgatggaggcagggcaggttgcggcggggacggagctgagccctcaaattgcagctccgagtttttcggcgggaacccctaatttcaaattagggttgaccgaagggctcgggttgacctcttgtgttgggccgggtattgggccagttggactgggatttgaaggctctgggcctattgctgatggtttccttggacacccatctgttttgggtgtgaggcggcttcgggaggaggactggcttgacgatgggaaacgattgaagttttctacaggcttcgtcgatgtcccaatcactgatgggaaagttccaaagaagaagggtcgaccacgtggtagtcggaataagcccaggtccactttagaggtgaaggttggggggccgtcttcggatgagctggacgtccttcctcaaggagactag

Protein Analysis

732

Amino Acids

79.94

Weight (kDa)

8.3

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 967
AatII GACGTC 1 cut(s) 2183
Acc36I ACCTGC 1 cut(s) 1782
Acc65I GGTACC 2 cut(s) 1681, 1746
AccB1I GGYRCC 3 cut(s) 1681, 1689, 1746
AccB7I CCANNNNNTGG 1 cut(s) 844
AccI GTMKAC 3 cut(s) 659, 1735, 2103
AccIII TCCGGA 1 cut(s) 1159
AclI AACGTT 1 cut(s) 453
AclWI GGATC 5 cut(s) 1185, 1198, 1219, 1495, 1603
AcsI RAATTY 1 cut(s) 711
AcvI CACGTG 1 cut(s) 2110
AcyI GRCGYC 1 cut(s) 2180
AfaI GTAC 9 cut(s) 95, 112, 359, 444, 533, 553, 649, 1683, 1748
AflIII ACRYGT 2 cut(s) 719, 1424
AgeI ACCGGT 1 cut(s) 1125
AgsI TTSAA 5 cut(s) 466, 1074, 1863, 1939, 2040
AjiI CACGTC 1 cut(s) 902
AjnI CCWGG 5 cut(s) 534, 815, 1034, 1589, 2128
AleI CACNNNNGTG 1 cut(s) 1438
AluBI AGCT 6 cut(s) 178, 561, 1566, 1812, 1831, 2175
AluI AGCT 6 cut(s) 178, 561, 1566, 1812, 1831, 2175
Alw21I GWGCWC 1 cut(s) 1103
Alw26I GTCTC 4 cut(s) 486, 1054, 1706, 2189
Alw44I GTGCAC 1 cut(s) 1099
AlwI GGATC 5 cut(s) 1185, 1198, 1219, 1495, 1603
Ama87I CYCGRG 2 cut(s) 972, 1885
Aor13HI TCCGGA 1 cut(s) 1159
AoxI GGCC 8 cut(s) 543, 702, 1266, 1374, 1906, 1918, 1948, 2158
ApaLI GTGCAC 1 cut(s) 1099
ApeKI GCWGC 6 cut(s) 287, 406, 728, 1031, 1722, 1828
ApoI RAATTY 1 cut(s) 711
AsiGI ACCGGT 1 cut(s) 1125
Asp718I GGTACC 2 cut(s) 1681, 1746
AspLEI GCGC 4 cut(s) 60, 287, 1511, 1722
AsuC2I CCSGG 4 cut(s) 216, 973, 974, 1910
AsuHPI GGTGA 6 cut(s) 109, 591, 1380, 1401, 1611, 2157
AsuNHI GCTAGC 1 cut(s) 561
AvaI CYCGRG 2 cut(s) 972, 1885
AvaII GGWCC 3 cut(s) 508, 1497, 2132
BaeGI GKGCMC 3 cut(s) 343, 1103, 1435
BaeI ACNNNNGTAYC 2 cut(s) 1738, 1771
BamHI GGATCC 1 cut(s) 1190
BanI GGYRCC 3 cut(s) 1681, 1689, 1746
BanII GRGCYC 4 cut(s) 1527, 1762, 1819, 1886
BbrPI CACGTG 1 cut(s) 2110
BbsI GAAGAC 2 cut(s) 1052, 2156
Bbv12I GWGCWC 1 cut(s) 1103
BbvI GCAGC 6 cut(s) 274, 418, 715, 1043, 1709, 1840
BccI CCATC 9 cut(s) 480, 622, 846, 1146, 1773, 1954, 1986, 2020, 2071
BceAI ACGGC 4 cut(s) 236, 1656, 1753, 2145
BcgI CGANNNNNNTGC 2 cut(s) 1679, 1713
BciT130I CCWGG 5 cut(s) 536, 817, 1036, 1591, 2130
BclI TGATCA 2 cut(s) 596, 1449
BcnI CCSGG 4 cut(s) 216, 973, 974, 1910
BcoDI GTCTC 4 cut(s) 486, 1054, 1706, 2189
BfaI CTAG 4 cut(s) 562, 860, 881, 2199
BfmI CTRYAG 4 cut(s) 935, 1080, 1723, 2048
BfoI RGCGCY 3 cut(s) 61, 288, 1723
BfuAI ACCTGC 1 cut(s) 1782
BisI GCNGC 9 cut(s) 288, 407, 729, 1032, 1151, 1723, 1799, 1829, 1999
BlpI GCTNAGC 1 cut(s) 1813
BlsI GCNGC 9 cut(s) 289, 408, 730, 1033, 1152, 1724, 1800, 1830, 2000
Bme1390I CCNGG 9 cut(s) 216, 536, 817, 973, 974, 1036, 1591, 1910, 2130
Bme18I GGWCC 3 cut(s) 508, 1497, 2132
BmeT110I CYCGRG 2 cut(s) 972, 1885
BmgBI CACGTC 1 cut(s) 902
BmrFI CCNGG 9 cut(s) 216, 536, 817, 973, 974, 1036, 1591, 1910, 2130
BmrI ACTGGG 3 cut(s) 506, 1739, 1939
BmsI GCATC 3 cut(s) 590, 1257, 1280
BmtI GCTAGC 1 cut(s) 565
BmuI ACTGGG 3 cut(s) 506, 1739, 1939
BpiI GAAGAC 2 cut(s) 1052, 2156
BpmI CTGGAG 3 cut(s) 1372, 1588, 1784
Bpu1102I GCTNAGC 1 cut(s) 1813
BpuEI CTTGAG 2 cut(s) 349, 2174
BpuMI CCSGG 4 cut(s) 216, 973, 974, 1910
BsaAI YACGTR 1 cut(s) 2110
BsaHI GRCGYC 1 cut(s) 2180
BsaI GGTCTC 1 cut(s) 486
BsaJI CCNNGG 8 cut(s) 79, 535, 972, 1270, 1590, 1685, 1968, 2128
BsaWI WCCGGW 2 cut(s) 1125, 1159
Bse118I RCCGGY 3 cut(s) 1125, 1548, 1749
Bse1I ACTGG 8 cut(s) 321, 512, 797, 849, 1734, 1921, 1934, 2020
Bse3DI GCAATG 1 cut(s) 250
BseAI TCCGGA 1 cut(s) 1159
BseBI CCWGG 5 cut(s) 536, 817, 1036, 1591, 2130
BseDI CCNNGG 8 cut(s) 79, 535, 972, 1270, 1590, 1685, 1968, 2128
BseGI GGATG 5 cut(s) 614, 755, 1009, 1138, 2175
BseMI GCAATG 1 cut(s) 250
BseMII CTCAG 6 cut(s) 416, 548, 1055, 1369, 1495, 1804
BseNI ACTGG 8 cut(s) 321, 512, 797, 849, 1734, 1921, 1934, 2020
BseRI GAGGAG 5 cut(s) 298, 352, 1213, 1216, 2023
BseSI GKGCMC 3 cut(s) 343, 1103, 1435
BseXI GCAGC 6 cut(s) 274, 418, 715, 1043, 1709, 1840
BseYI CCCAGC 1 cut(s) 383
BsgI GTGCAG 1 cut(s) 1420
BshFI GGCC 8 cut(s) 545, 704, 1268, 1376, 1908, 1920, 1950, 2160
BshNI GGYRCC 3 cut(s) 1681, 1689, 1746
BshTI ACCGGT 1 cut(s) 1125
BsiHKAI GWGCWC 1 cut(s) 1103
BsiHKCI CYCGRG 2 cut(s) 972, 1885
BsiSI CCGG 7 cut(s) 215, 973, 1126, 1160, 1549, 1750, 1909
BslFI GGGAC 6 cut(s) 231, 494, 955, 1335, 1818, 2050
BsmAI GTCTC 4 cut(s) 486, 1054, 1706, 2189
BsmBI CGTCTC 1 cut(s) 1706
BsmFI GGGAC 6 cut(s) 231, 494, 955, 1335, 1818, 2050
BsnI GGCC 8 cut(s) 545, 704, 1268, 1376, 1908, 1920, 1950, 2160
Bso31I GGTCTC 1 cut(s) 486
BsoBI CYCGRG 2 cut(s) 972, 1885
Bsp1286I GDGCHC 7 cut(s) 343, 1103, 1435, 1527, 1762, 1819, 1886
Bsp13I TCCGGA 1 cut(s) 1159
Bsp1407I TGTACA 2 cut(s) 93, 551
Bsp143I GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
Bsp1720I GCTNAGC 1 cut(s) 1813
Bsp19I CCATGG 1 cut(s) 1270
BspANI GGCC 8 cut(s) 545, 704, 1268, 1376, 1908, 1920, 1950, 2160
BspCNI CTCAG 6 cut(s) 415, 549, 1056, 1370, 1494, 1805
BspEI TCCGGA 1 cut(s) 1159
BspHI TCATGA 2 cut(s) 269, 990
BspMAI CTGCAG 2 cut(s) 939, 1727
BspMI ACCTGC 1 cut(s) 1782
BspOI GCTAGC 1 cut(s) 565
BspPI GGATC 5 cut(s) 1185, 1198, 1219, 1495, 1603
BspT107I GGYRCC 3 cut(s) 1681, 1689, 1746
BspTNI GGTCTC 1 cut(s) 486
BsrDI GCAATG 1 cut(s) 250
BsrFI RCCGGY 3 cut(s) 1125, 1548, 1749
BsrGI TGTACA 2 cut(s) 93, 551
BsrI ACTGG 8 cut(s) 321, 512, 797, 849, 1734, 1921, 1934, 2020
BssAI RCCGGY 3 cut(s) 1125, 1548, 1749
BssECI CCNNGG 8 cut(s) 79, 535, 972, 1270, 1590, 1685, 1968, 2128
BssMI GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
BssNI GRCGYC 1 cut(s) 2180
BssT1I CCWWGG 3 cut(s) 79, 1270, 1968
Bst2UI CCWGG 5 cut(s) 536, 817, 1036, 1591, 2130
Bst6I CTCTTC 1 cut(s) 316
BstACI GRCGYC 1 cut(s) 2180
BstAPI GCANNNNNTGC 1 cut(s) 1398
BstAUI TGTACA 2 cut(s) 93, 551
BstBAI YACGTR 1 cut(s) 2110
BstC8I GCNNGC 6 cut(s) 56, 62, 180, 563, 1238, 1550
BstDEI CTNAG 6 cut(s) 402, 557, 1064, 1378, 1481, 1813
BstDSI CCRYGG 2 cut(s) 1270, 1685
BstEII GGTNACC 1 cut(s) 243
BstENI CCTNNNNNAGG 1 cut(s) 539
BstF5I GGATG 5 cut(s) 614, 755, 1009, 1138, 2175
BstH2I RGCGCY 3 cut(s) 61, 288, 1723
BstHHI GCGC 4 cut(s) 60, 287, 1511, 1722
BstKTI GATC 8 cut(s) 401, 599, 1193, 1214, 1452, 1490, 1538, 1598
BstMAI GTCTC 4 cut(s) 486, 1054, 1706, 2189
BstMBI GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
BstMWI GCNNNNNNNGC 3 cut(s) 10, 882, 1398
BstNI CCWGG 5 cut(s) 536, 817, 1036, 1591, 2130
BstNSI RCATGY 2 cut(s) 723, 1428
BstPI GGTNACC 1 cut(s) 243
BstSCI CCNGG 9 cut(s) 214, 534, 815, 971, 972, 1034, 1589, 1908, 2128
BstSFI CTRYAG 4 cut(s) 935, 1080, 1723, 2048
BstSLI GKGCMC 3 cut(s) 343, 1103, 1435
BstV1I GCAGC 6 cut(s) 274, 418, 715, 1043, 1709, 1840
BstV2I GAAGAC 2 cut(s) 1052, 2156
BstX2I RGATCY 4 cut(s) 1190, 1211, 1487, 1595
BstYI RGATCY 4 cut(s) 1190, 1211, 1487, 1595
BsuRI GGCC 8 cut(s) 545, 704, 1268, 1376, 1908, 1920, 1950, 2160
BtgI CCRYGG 2 cut(s) 1270, 1685
BtgZI GCGATG 1 cut(s) 1168
BtrI CACGTC 1 cut(s) 902
BtsCI GGATG 5 cut(s) 614, 755, 1009, 1138, 2175
BtsI GCAGTG 2 cut(s) 932, 1247
BtsIMutI CAGTG 6 cut(s) 314, 554, 932, 1115, 1247, 2072
BveI ACCTGC 1 cut(s) 1782
Cac8I GCNNGC 6 cut(s) 56, 62, 180, 563, 1238, 1550
CciI TCATGA 2 cut(s) 269, 990
CfoI GCGC 4 cut(s) 60, 287, 1511, 1722
Cfr10I RCCGGY 3 cut(s) 1125, 1548, 1749
Cfr9I CCCGGG 1 cut(s) 972
Csp6I GTAC 9 cut(s) 94, 111, 358, 443, 532, 552, 648, 1682, 1747
CspAI ACCGGT 1 cut(s) 1125
CspCI CAANNNNNGTGG 4 cut(s) 360, 395, 1590, 1625
CviQI GTAC 9 cut(s) 94, 111, 358, 443, 532, 552, 648, 1682, 1747
DdeI CTNAG 6 cut(s) 402, 557, 1064, 1378, 1481, 1813
DpnI GATC 8 cut(s) 400, 598, 1192, 1213, 1451, 1489, 1537, 1597
DpnII GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
DraI TTTAAA 1 cut(s) 186
DrdI GACNNNNNNGTC 1 cut(s) 967
DseDI GACNNNNNNGTC 1 cut(s) 967
Eam1104I CTCTTC 1 cut(s) 316
EarI CTCTTC 1 cut(s) 316
EciI GGCGGA 1 cut(s) 1345
Eco130I CCWWGG 3 cut(s) 79, 1270, 1968
Eco147I AGGCCT 1 cut(s) 545
Eco24I GRGCYC 4 cut(s) 1527, 1762, 1819, 1886
Eco31I GGTCTC 1 cut(s) 486
Eco47I GGWCC 3 cut(s) 508, 1497, 2132
Eco72I CACGTG 1 cut(s) 2110
Eco88I CYCGRG 2 cut(s) 972, 1885
Eco91I GGTNACC 1 cut(s) 243
EcoNI CCTNNNNNAGG 1 cut(s) 539
EcoO65I GGTNACC 1 cut(s) 243
EcoRII CCWGG 5 cut(s) 534, 815, 1034, 1589, 2128
EcoT14I CCWWGG 3 cut(s) 79, 1270, 1968
EcoT22I ATGCAT 1 cut(s) 1394
EcoT38I GRGCYC 4 cut(s) 1527, 1762, 1819, 1886
ErhI CCWWGG 3 cut(s) 79, 1270, 1968
Esp3I CGTCTC 1 cut(s) 1706
FaqI GGGAC 6 cut(s) 231, 494, 955, 1335, 1818, 2050
FauI CCCGC 3 cut(s) 618, 1794, 1839
FbaI TGATCA 2 cut(s) 596, 1449
FblI GTMKAC 3 cut(s) 659, 1735, 2103
Fnu4HI GCNGC 9 cut(s) 288, 407, 729, 1032, 1151, 1723, 1799, 1829, 1999
FokI GGATG 5 cut(s) 601, 742, 996, 1125, 2182
FriOI GRGCYC 4 cut(s) 1527, 1762, 1819, 1886
Fsp4HI GCNGC 9 cut(s) 288, 407, 729, 1032, 1151, 1723, 1799, 1829, 1999
FspBI CTAG 4 cut(s) 562, 860, 881, 2199
GlaI GCGC 4 cut(s) 59, 286, 1510, 1721
GluI GCNGC 9 cut(s) 288, 407, 729, 1032, 1151, 1723, 1799, 1829, 1999
GsaI CCCAGC 1 cut(s) 387
GsuI CTGGAG 3 cut(s) 1372, 1588, 1784
HaeII RGCGCY 3 cut(s) 61, 288, 1723
HaeIII GGCC 8 cut(s) 545, 704, 1268, 1376, 1908, 1920, 1950, 2160
HapII CCGG 7 cut(s) 215, 973, 1126, 1160, 1549, 1750, 1909
HhaI GCGC 4 cut(s) 60, 287, 1511, 1722
Hin1I GRCGYC 1 cut(s) 2180
Hin6I GCGC 4 cut(s) 58, 285, 1509, 1720
HinP1I GCGC 4 cut(s) 58, 285, 1509, 1720
HincII GTYRAC 4 cut(s) 1736, 1874, 1892, 2104
HindII GTYRAC 4 cut(s) 1736, 1874, 1892, 2104
HinfI GANTC 9 cut(s) 156, 297, 495, 823, 961, 1323, 1404, 1517, 1740
HpaII CCGG 7 cut(s) 215, 973, 1126, 1160, 1549, 1750, 1909
HphI GGTGA 6 cut(s) 109, 591, 1380, 1401, 1611, 2157
Hpy99I CGWCG 4 cut(s) 1698, 1701, 1740, 2062
HpyCH4IV ACGT 4 cut(s) 453, 901, 2109, 2180
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 882, 1398
HpyF3I CTNAG 6 cut(s) 402, 557, 1064, 1378, 1481, 1813
HpySE526I ACGT 4 cut(s) 453, 901, 2109, 2180
Hsp92I GRCGYC 1 cut(s) 2180
HspAI GCGC 4 cut(s) 58, 285, 1509, 1720
Kpn2I TCCGGA 1 cut(s) 1159
KpnI GGTACC 2 cut(s) 1685, 1750
KroI GCCGGC 1 cut(s) 1548
KroNI GCCGGC 1 cut(s) 1550
Ksp22I TGATCA 2 cut(s) 596, 1449
Kzo9I GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
LmnI GCTCC 5 cut(s) 1233, 1341, 1765, 1809, 1836
Lsp1109I GCAGC 6 cut(s) 274, 418, 715, 1043, 1709, 1840
LweI GCATC 3 cut(s) 590, 1257, 1280
MaeI CTAG 4 cut(s) 562, 860, 881, 2199
MaeII ACGT 4 cut(s) 453, 901, 2109, 2180
MaeIII GTNAC 7 cut(s) 115, 171, 205, 243, 454, 1368, 1639
MalI GATC 8 cut(s) 400, 598, 1192, 1213, 1451, 1489, 1537, 1597
MboI GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
MboII GAAGA 9 cut(s) 303, 685, 688, 1057, 1206, 1249, 1608, 2106, 2156
MflI RGATCY 4 cut(s) 1190, 1211, 1487, 1595
MhlI GDGCHC 7 cut(s) 343, 1103, 1435, 1527, 1762, 1819, 1886
MlyI GAGTC 4 cut(s) 832, 955, 1317, 1526
MmeI TCCRAC 3 cut(s) 1608, 1905, 2098
Mph1103I ATGCAT 1 cut(s) 1394
MreI CGCCGGCG 1 cut(s) 1548
MroI TCCGGA 1 cut(s) 1159
MroNI GCCGGC 1 cut(s) 1548
MseI TTAA 4 cut(s) 140, 185, 865, 1229
MslI CAYNNNNRTG 1 cut(s) 1438
MspA1I CMGCKG 1 cut(s) 178
MspI CCGG 7 cut(s) 215, 973, 1126, 1160, 1549, 1750, 1909
MspR9I CCNGG 9 cut(s) 216, 536, 817, 973, 974, 1036, 1591, 1910, 2130
MvaI CCWGG 5 cut(s) 536, 817, 1036, 1591, 2130
MwoI GCNNNNNNNGC 3 cut(s) 10, 882, 1398
NaeI GCCGGC 1 cut(s) 1550
NciI CCSGG 4 cut(s) 216, 973, 974, 1910
NcoI CCATGG 1 cut(s) 1270
NdeII GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
NgoMIV GCCGGC 1 cut(s) 1548
NheI GCTAGC 1 cut(s) 561
NmuCI GTSAC 3 cut(s) 115, 1368, 1639
NsiI ATGCAT 1 cut(s) 1394
NspI RCATGY 2 cut(s) 723, 1428
OliI CACNNNNGTG 1 cut(s) 1438
PagI TCATGA 2 cut(s) 269, 990
PceI AGGCCT 1 cut(s) 545
PciI ACATGT 2 cut(s) 719, 1424
PdiI GCCGGC 1 cut(s) 1550
PfeI GAWTC 5 cut(s) 156, 297, 495, 1404, 1740
PflFI GACNNNGTC 2 cut(s) 506, 1731
PflMI CCANNNNNTGG 1 cut(s) 844
PfoI TCCNGGA 1 cut(s) 214
PinAI ACCGGT 1 cut(s) 1125
PkrI GCNGC 9 cut(s) 289, 408, 730, 1033, 1152, 1724, 1800, 1830, 2000
PleI GAGTC 4 cut(s) 831, 955, 1317, 1525
PmaCI CACGTG 1 cut(s) 2110
PmlI CACGTG 1 cut(s) 2110
PpsI GAGTC 4 cut(s) 831, 955, 1317, 1525
Ppu21I YACGTR 1 cut(s) 2110
PscI ACATGT 2 cut(s) 719, 1424
Psp1406I AACGTT 1 cut(s) 453
Psp6I CCWGG 5 cut(s) 534, 815, 1034, 1589, 2128
PspCI CACGTG 1 cut(s) 2110
PspEI GGTNACC 1 cut(s) 243
PspFI CCCAGC 1 cut(s) 383
PspGI CCWGG 5 cut(s) 534, 815, 1034, 1589, 2128
PstI CTGCAG 2 cut(s) 939, 1727
PsuI RGATCY 4 cut(s) 1190, 1211, 1487, 1595
PsyI GACNNNGTC 2 cut(s) 506, 1731
PvuII CAGCTG 1 cut(s) 178
RsaI GTAC 9 cut(s) 95, 112, 359, 444, 533, 553, 649, 1683, 1748
RsaNI GTAC 9 cut(s) 94, 111, 358, 443, 532, 552, 648, 1682, 1747
RseI CAYNNNNRTG 1 cut(s) 1438
SalI GTCGAC 2 cut(s) 1734, 2102
SaqAI TTAA 4 cut(s) 140, 185, 865, 1229
SatI GCNGC 9 cut(s) 288, 407, 729, 1032, 1151, 1723, 1799, 1829, 1999
Sau3AI GATC 8 cut(s) 398, 596, 1190, 1211, 1449, 1487, 1535, 1595
SchI GAGTC 4 cut(s) 832, 955, 1317, 1526
ScrFI CCNGG 9 cut(s) 216, 536, 817, 973, 974, 1036, 1591, 1910, 2130
SduI GDGCHC 7 cut(s) 343, 1103, 1435, 1527, 1762, 1819, 1886
SfaNI GCATC 3 cut(s) 590, 1257, 1280
SfcI CTRYAG 4 cut(s) 935, 1080, 1723, 2048
SgrAI CRCCGGYG 1 cut(s) 1548
SinI GGWCC 3 cut(s) 508, 1497, 2132
SmaI CCCGGG 1 cut(s) 974
SmiMI CAYNNNNRTG 1 cut(s) 1438
SmlI CTYRAG 2 cut(s) 364, 2189
SmoI CTYRAG 2 cut(s) 364, 2189
SseBI AGGCCT 1 cut(s) 545
SspMI CTAG 4 cut(s) 562, 860, 881, 2199
StuI AGGCCT 1 cut(s) 545
StyD4I CCNGG 9 cut(s) 214, 534, 815, 971, 972, 1034, 1589, 1908, 2128
StyI CCWWGG 3 cut(s) 79, 1270, 1968
TaiI ACGT 4 cut(s) 456, 904, 2112, 2183
TaqI TCGA 7 cut(s) 484, 955, 1043, 1288, 1735, 2060, 2103
TaqII GACCGA 2 cut(s) 1658, 1891
TatI WGTACW 3 cut(s) 93, 357, 551
TauI GCSGC 3 cut(s) 1153, 1801, 2001
TfiI GAWTC 5 cut(s) 156, 297, 495, 1404, 1740
Tru1I TTAA 4 cut(s) 140, 185, 865, 1229
Tru9I TTAA 4 cut(s) 140, 185, 865, 1229
TscAI CASTG 6 cut(s) 321, 561, 939, 1122, 1247, 2079
TseFI GTSAC 3 cut(s) 115, 1368, 1639
TseI GCWGC 6 cut(s) 287, 406, 728, 1031, 1722, 1828
Tsp45I GTSAC 3 cut(s) 115, 1368, 1639
TspDTI ATGAA 4 cut(s) 979, 1007, 1249, 1595
TspGWI ACGGA 2 cut(s) 1183, 1822
TspMI CCCGGG 1 cut(s) 972
TspRI CASTG 6 cut(s) 321, 561, 939, 1122, 1247, 2079
Tth111I GACNNNGTC 2 cut(s) 506, 1731
Van91I CCANNNNNTGG 1 cut(s) 844
VneI GTGCAC 1 cut(s) 1099
VpaK11BI GGWCC 3 cut(s) 508, 1497, 2132
XagI CCTNNNNNAGG 1 cut(s) 539
XapI RAATTY 1 cut(s) 711
XceI RCATGY 2 cut(s) 723, 1428
XcmI CCANNNNNNNNNTGG 3 cut(s) 140, 519, 1683
XmaI CCCGGG 1 cut(s) 972
XmiI GTMKAC 3 cut(s) 659, 1735, 2103
XspI CTAG 4 cut(s) 562, 860, 881, 2199
ZraI GACGTC 1 cut(s) 2181
Zsp2I ATGCAT 1 cut(s) 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.