Rmu_sc0020554.1_g000001

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020554.1
OG0000123
Physical Location & Seq
Forward (+)
1796 .. 2958
1163 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020554.1_g000001.1.cds

Sequence Viewer

Length: 1088 bp
atggtggcggaggaggctatcgtgcacctagttgggggcaaggatgcaatccaagatccttttttctatgtatgtggccggttgctctcccaaaaacgggtgctgcttccgtcgtttttggcagctatttccggcatttggggtttgaaagagcgggttttgatccgtgaggaggaaggagggatctttgtctttcaattcaaggagcaggagacgaaagatcacgtccttaatggcagcctttggttttttaacaactccatgcttctcttggcggactatgacggtctctgggatctgacagaggttccgctgaattcaatggaggtttgggtggcggtgaaaggtctgcgcgtggctatgcgcaatgcccgtgccctgaccttacttgggaactccttggggcgctttgtcaggtacgaccaaggtacgtactcgtttttggcagagatggcggtggtcttggagttgagatatgagaaacgccatgtcatttgtcggggctgcggcttctttgaccacgggctaggttgctgtgacaacgccttgacggcggtcatggcgtcaggagatgggtcgggctgcactcctccagcgttggtggctattgatgtggccagaattgagtcgcccggccggtctgaggggttgctggaggttgggctaggtccggagggctggacggaggaagctatggcgactgggtgggtgacgtcgggatctactgttgagcctgcgtctgccccgggattttcggcgggaaacctagatttgaagttagggtttgttattgggccgggtggcagcaggcctgaaggggaggttgggttgactttgggcataggtggtgagtgtgacggcctgatgggtgagagtgtgggcgggccgactgcacaggggccagctgtacataggctagttgcaaatgggccagggactgatgctgtttatcccaaaattttggggactcgcaaatggtgccatggtgagtggcatatggagaagcagcaaaaaccaaccttggcggagataccccatgagtttcatcttggtgaacttgtggaggtcccggtgactattgggaagac
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

363

Amino Acids

39.01

Weight (kDa)

5.14

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 716
Acc16I TGCGCA 1 cut(s) 365
AccB1I GGYRCC 1 cut(s) 978
AccBSI CCGCTC 1 cut(s) 154
AccII CGCG 1 cut(s) 354
AccIII TCCGGA 1 cut(s) 670
AclWI GGATC 5 cut(s) 50, 157, 191, 303, 727
AcoI YGGCCR 3 cut(s) 76, 615, 634
AcsI RAATTY 2 cut(s) 316, 957
AcuI CTGAAG 1 cut(s) 834
AcyI GRCGYC 2 cut(s) 563, 713
AfaI GTAC 4 cut(s) 419, 430, 434, 909
AfiI CCNNNNNNNGG 7 cut(s) 34, 96, 97, 138, 172, 390, 643
AgsI TTSAA 5 cut(s) 148, 197, 202, 321, 775
AjiI CACGTC 1 cut(s) 226
AjnI CCWGG 1 cut(s) 931
AjuI GAANNNNNNNTTGG 2 cut(s) 807, 839
AluBI AGCT 3 cut(s) 125, 692, 905
AluI AGCT 3 cut(s) 125, 692, 905
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 2 cut(s) 206, 293
Alw44I GTGCAC 1 cut(s) 23
AlwI GGATC 5 cut(s) 50, 157, 191, 303, 727
AlwNI CAGNNNCTG 1 cut(s) 938
Ama87I CYCGRG 1 cut(s) 745
Aor13HI TCCGGA 1 cut(s) 670
AoxI GGCC 9 cut(s) 76, 615, 634, 794, 809, 859, 884, 899, 929
ApaLI GTGCAC 1 cut(s) 23
ApeKI GCWGC 7 cut(s) 103, 122, 237, 504, 582, 804, 1006
ApoI RAATTY 2 cut(s) 316, 957
AspLEI GCGC 3 cut(s) 354, 366, 408
AspS9I GGNCC 6 cut(s) 668, 794, 884, 899, 929, 1066
AsuC2I CCSGG 5 cut(s) 633, 746, 747, 798, 1070
AsuHPI GGTGA 7 cut(s) 352, 721, 860, 881, 998, 1064, 1084
AvaI CYCGRG 1 cut(s) 745
AvaII GGWCC 2 cut(s) 668, 1066
BaeGI GKGCMC 2 cut(s) 27, 379
BalI TGGCCA 1 cut(s) 617
BanI GGYRCC 1 cut(s) 978
Bbv12I GWGCWC 1 cut(s) 27
BbvI GCAGC 7 cut(s) 90, 134, 249, 491, 569, 816, 1018
BccI CCATC 3 cut(s) 445, 566, 859
BceAI ACGGC 2 cut(s) 567, 874
BciT130I CCWGG 1 cut(s) 933
BcnI CCSGG 5 cut(s) 633, 746, 747, 798, 1070
BcoDI GTCTC 2 cut(s) 206, 293
BfaI CTAG 5 cut(s) 29, 527, 665, 767, 917
BfoI RGCGCY 1 cut(s) 409
BglI GCCNNNNNGGC 1 cut(s) 551
BisI GCNGC 8 cut(s) 104, 123, 238, 505, 508, 583, 805, 1007
BlsI GCNGC 8 cut(s) 105, 124, 239, 506, 509, 584, 806, 1008
Bme1390I CCNGG 6 cut(s) 633, 746, 747, 798, 933, 1070
Bme18I GGWCC 2 cut(s) 668, 1066
BmeT110I CYCGRG 1 cut(s) 745
BmgBI CACGTC 1 cut(s) 226
BmgT120I GGNCC 6 cut(s) 668, 794, 884, 899, 929, 1066
BmiI GGNNCC 4 cut(s) 309, 900, 980, 1068
BmrFI CCNGG 6 cut(s) 633, 746, 747, 798, 933, 1070
BmrI ACTGGG 1 cut(s) 711
BmsI GCATC 2 cut(s) 34, 931
BmuI ACTGGG 1 cut(s) 711
BoxI GACNNNNGTC 1 cut(s) 554
BpmI CTGGAG 2 cut(s) 576, 674
BpuMI CCSGG 5 cut(s) 633, 746, 747, 798, 1070
BsaAI YACGTR 1 cut(s) 432
BsaHI GRCGYC 2 cut(s) 563, 713
BsaI GGTCTC 1 cut(s) 293
BsaJI CCNNGG 8 cut(s) 399, 424, 520, 744, 745, 932, 982, 1020
BsaWI WCCGGW 1 cut(s) 670
BsaXI ACNNNNNCTCC 2 cut(s) 812, 842
Bsc4I CCNNNNNNNGG 7 cut(s) 34, 96, 97, 138, 172, 390, 643
Bse118I RCCGGY 2 cut(s) 78, 636
Bse1I ACTGG 1 cut(s) 706
Bse3DI GCAATG 1 cut(s) 373
BseAI TCCGGA 1 cut(s) 670
BseBI CCWGG 1 cut(s) 933
BseDI CCNNGG 8 cut(s) 399, 424, 520, 744, 745, 932, 982, 1020
BseGI GGATG 1 cut(s) 49
BseLI CCNNNNNNNGG 7 cut(s) 34, 96, 97, 138, 172, 390, 643
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 1 cut(s) 633
BseNI ACTGG 1 cut(s) 706
BseRI GAGGAG 3 cut(s) 26, 185, 579
BseSI GKGCMC 2 cut(s) 27, 379
BseX3I CGGCCG 1 cut(s) 634
BseXI GCAGC 7 cut(s) 90, 134, 249, 491, 569, 816, 1018
BsgI GTGCAG 2 cut(s) 568, 876
Bsh1236I CGCG 1 cut(s) 354
Bsh1285I CGRYCG 1 cut(s) 637
BshFI GGCC 9 cut(s) 78, 617, 636, 796, 811, 861, 886, 901, 931
BshNI GGYRCC 1 cut(s) 978
BsiEI CGRYCG 1 cut(s) 637
BsiHKAI GWGCWC 1 cut(s) 27
BsiHKCI CYCGRG 1 cut(s) 745
BsiSI CCGG 8 cut(s) 79, 132, 633, 637, 671, 746, 797, 1070
BslFI GGGAC 3 cut(s) 949, 979, 1052
BslI CCNNNNNNNGG 7 cut(s) 34, 96, 97, 138, 172, 390, 643
BsmAI GTCTC 2 cut(s) 206, 293
BsmBI CGTCTC 1 cut(s) 206
BsmFI GGGAC 3 cut(s) 949, 979, 1052
BsnI GGCC 9 cut(s) 78, 617, 636, 796, 811, 861, 886, 901, 931
Bso31I GGTCTC 1 cut(s) 293
BsoBI CYCGRG 1 cut(s) 745
Bsp1286I GDGCHC 2 cut(s) 27, 379
Bsp13I TCCGGA 1 cut(s) 670
Bsp1407I TGTACA 1 cut(s) 907
Bsp143I GATC 6 cut(s) 55, 162, 183, 220, 295, 719
Bsp19I CCATGG 1 cut(s) 982
BspANI GGCC 9 cut(s) 78, 617, 636, 796, 811, 861, 886, 901, 931
BspCNI CTCAG 1 cut(s) 634
BspEI TCCGGA 1 cut(s) 670
BspFNI CGCG 1 cut(s) 354
BspLI GGNNCC 4 cut(s) 309, 900, 980, 1068
BspPI GGATC 5 cut(s) 50, 157, 191, 303, 727
BspT107I GGYRCC 1 cut(s) 978
BspTNI GGTCTC 1 cut(s) 293
BsrBI CCGCTC 1 cut(s) 154
BsrDI GCAATG 1 cut(s) 373
BsrFI RCCGGY 2 cut(s) 78, 636
BsrGI TGTACA 1 cut(s) 907
BsrI ACTGG 1 cut(s) 706
BssAI RCCGGY 2 cut(s) 78, 636
BssECI CCNNGG 8 cut(s) 399, 424, 520, 744, 745, 932, 982, 1020
BssMI GATC 6 cut(s) 55, 162, 183, 220, 295, 719
BssNI GRCGYC 2 cut(s) 563, 713
BssT1I CCWWGG 4 cut(s) 399, 424, 982, 1020
Bst2UI CCWGG 1 cut(s) 933
Bst4CI ACNGT 2 cut(s) 287, 727
BstACI GRCGYC 2 cut(s) 563, 713
BstAPI GCANNNNNTGC 1 cut(s) 978
BstAUI TGTACA 1 cut(s) 907
BstBAI YACGTR 1 cut(s) 432
BstC8I GCNNGC 4 cut(s) 735, 809, 884, 903
BstDEI CTNAG 1 cut(s) 642
BstDSI CCRYGG 2 cut(s) 520, 982
BstF5I GGATG 1 cut(s) 49
BstFNI CGCG 1 cut(s) 354
BstH2I RGCGCY 1 cut(s) 409
BstHHI GCGC 3 cut(s) 354, 366, 408
BstKTI GATC 6 cut(s) 58, 165, 186, 223, 298, 722
BstMAI GTCTC 2 cut(s) 206, 293
BstMBI GATC 6 cut(s) 55, 162, 183, 220, 295, 719
BstMCI CGRYCG 1 cut(s) 637
BstMWI GCNNNNNNNGC 6 cut(s) 14, 452, 551, 560, 602, 978
BstNI CCWGG 1 cut(s) 933
BstPAI GACNNNNGTC 1 cut(s) 554
BstSCI CCNGG 6 cut(s) 631, 744, 745, 796, 931, 1068
BstSLI GKGCMC 2 cut(s) 27, 379
BstSNI TACGTA 1 cut(s) 432
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 7 cut(s) 90, 134, 249, 491, 569, 816, 1018
BstX2I RGATCY 4 cut(s) 55, 183, 295, 719
BstXI CCANNNNNNTGG 1 cut(s) 961
BstYI RGATCY 4 cut(s) 55, 183, 295, 719
BstZI CGGCCG 1 cut(s) 634
BsuRI GGCC 9 cut(s) 78, 617, 636, 796, 811, 861, 886, 901, 931
BtgI CCRYGG 2 cut(s) 520, 982
BtrI CACGTC 1 cut(s) 226
BtsCI GGATG 1 cut(s) 49
Cac8I GCNNGC 4 cut(s) 735, 809, 884, 903
CaiI CAGNNNCTG 1 cut(s) 938
CfoI GCGC 3 cut(s) 354, 366, 408
Cfr10I RCCGGY 2 cut(s) 78, 636
Cfr13I GGNCC 6 cut(s) 668, 794, 884, 899, 929, 1066
Cfr9I CCCGGG 1 cut(s) 745
CseI GACGC 2 cut(s) 552, 726
Csp6I GTAC 4 cut(s) 418, 429, 433, 908
CviAII CATG 5 cut(s) 262, 488, 559, 983, 1037
CviQI GTAC 4 cut(s) 418, 429, 433, 908
DdeI CTNAG 1 cut(s) 642
DpnI GATC 6 cut(s) 57, 164, 185, 222, 297, 721
DpnII GATC 6 cut(s) 55, 162, 183, 220, 295, 719
EaeI YGGCCR 3 cut(s) 76, 615, 634
EagI CGGCCG 1 cut(s) 634
EciI GGCGGA 3 cut(s) 23, 290, 1040
EclXI CGGCCG 1 cut(s) 634
Eco105I TACGTA 1 cut(s) 432
Eco130I CCWWGG 4 cut(s) 399, 424, 982, 1020
Eco147I AGGCCT 1 cut(s) 811
Eco31I GGTCTC 1 cut(s) 293
Eco47I GGWCC 2 cut(s) 668, 1066
Eco52I CGGCCG 1 cut(s) 634
Eco57I CTGAAG 1 cut(s) 834
Eco88I CYCGRG 1 cut(s) 745
EcoO109I RGGNCCY 1 cut(s) 1066
EcoRI GAATTC 1 cut(s) 316
EcoRII CCWGG 1 cut(s) 931
EcoT14I CCWWGG 4 cut(s) 399, 424, 982, 1020
ErhI CCWWGG 4 cut(s) 399, 424, 982, 1020
Esp3I CGTCTC 1 cut(s) 206
FaeI CATG 5 cut(s) 265, 491, 562, 986, 1040
FaqI GGGAC 3 cut(s) 949, 979, 1052
FatI CATG 5 cut(s) 261, 487, 558, 982, 1036
FauI CCCGC 3 cut(s) 147, 751, 875
FauNDI CATATG 1 cut(s) 996
Fnu4HI GCNGC 8 cut(s) 104, 123, 238, 505, 508, 583, 805, 1007
FokI GGATG 1 cut(s) 56
Fsp4HI GCNGC 8 cut(s) 104, 123, 238, 505, 508, 583, 805, 1007
FspBI CTAG 5 cut(s) 29, 527, 665, 767, 917
FspI TGCGCA 1 cut(s) 365
GlaI GCGC 3 cut(s) 353, 365, 407
GluI GCNGC 8 cut(s) 104, 123, 238, 505, 508, 583, 805, 1007
GsuI CTGGAG 2 cut(s) 576, 674
HaeII RGCGCY 1 cut(s) 409
HaeIII GGCC 9 cut(s) 78, 617, 636, 796, 811, 861, 886, 901, 931
HapII CCGG 8 cut(s) 79, 132, 633, 637, 671, 746, 797, 1070
HgaI GACGC 2 cut(s) 552, 726
HhaI GCGC 3 cut(s) 354, 366, 408
Hin1I GRCGYC 2 cut(s) 563, 713
Hin1II CATG 5 cut(s) 265, 491, 562, 986, 1040
Hin6I GCGC 3 cut(s) 352, 364, 406
HinP1I GCGC 3 cut(s) 352, 364, 406
HincII GTYRAC 1 cut(s) 831
HindII GTYRAC 1 cut(s) 831
HinfI GANTC 2 cut(s) 626, 967
HpaII CCGG 8 cut(s) 79, 132, 633, 637, 671, 746, 797, 1070
HphI GGTGA 7 cut(s) 352, 721, 860, 881, 998, 1064, 1084
Hpy166II GTNNAC 3 cut(s) 25, 831, 1055
Hpy188I TCNGA 2 cut(s) 300, 643
Hpy188III TCNNGA 3 cut(s) 567, 671, 717
Hpy8I GTNNAC 3 cut(s) 25, 831, 1055
Hpy99I CGWCG 2 cut(s) 115, 718
HpyAV CCTTC 2 cut(s) 170, 809
HpyCH4III ACNGT 2 cut(s) 287, 727
HpyCH4IV ACGT 3 cut(s) 225, 431, 713
HpyCH4V TGCA 5 cut(s) 25, 47, 585, 893, 923
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 452, 551, 560, 602, 978
HpyF3I CTNAG 1 cut(s) 642
HpySE526I ACGT 3 cut(s) 225, 431, 713
Hsp92I GRCGYC 2 cut(s) 563, 713
Hsp92II CATG 5 cut(s) 265, 491, 562, 986, 1040
HspAI GCGC 3 cut(s) 352, 364, 406
Kpn2I TCCGGA 1 cut(s) 670
Kzo9I GATC 6 cut(s) 55, 162, 183, 220, 295, 719
LmnI GCTCC 1 cut(s) 205
Lsp1109I GCAGC 7 cut(s) 90, 134, 249, 491, 569, 816, 1018
LweI GCATC 2 cut(s) 34, 931
MaeI CTAG 5 cut(s) 29, 527, 665, 767, 917
MaeII ACGT 3 cut(s) 225, 431, 713
MaeIII GTNAC 4 cut(s) 536, 709, 854, 1072
MalI GATC 6 cut(s) 57, 164, 185, 222, 297, 721
MbiI CCGCTC 1 cut(s) 154
MboI GATC 6 cut(s) 55, 162, 183, 220, 295, 719
MflI RGATCY 4 cut(s) 55, 183, 295, 719
MhlI GDGCHC 2 cut(s) 27, 379
MlsI TGGCCA 1 cut(s) 617
MluCI AATT 4 cut(s) 197, 316, 621, 957
MluNI TGGCCA 1 cut(s) 617
MlyI GAGTC 2 cut(s) 635, 961
Mox20I TGGCCA 1 cut(s) 617
MroI TCCGGA 1 cut(s) 670
MscI TGGCCA 1 cut(s) 617
MseI TTAA 2 cut(s) 231, 252
MslI CAYNNNNRTG 1 cut(s) 1050
Msp20I TGGCCA 1 cut(s) 617
MspA1I CMGCKG 2 cut(s) 313, 905
MspI CCGG 8 cut(s) 79, 132, 633, 637, 671, 746, 797, 1070
MspR9I CCNGG 6 cut(s) 633, 746, 747, 798, 933, 1070
MvaI CCWGG 1 cut(s) 933
MvnI CGCG 1 cut(s) 354
MwoI GCNNNNNNNGC 6 cut(s) 14, 452, 551, 560, 602, 978
NciI CCSGG 5 cut(s) 633, 746, 747, 798, 1070
NcoI CCATGG 1 cut(s) 982
NdeI CATATG 1 cut(s) 996
NdeII GATC 6 cut(s) 55, 162, 183, 220, 295, 719
NlaIII CATG 5 cut(s) 265, 491, 562, 986, 1040
NlaIV GGNNCC 4 cut(s) 309, 900, 980, 1068
NmuCI GTSAC 4 cut(s) 536, 709, 854, 1072
NsbI TGCGCA 1 cut(s) 365
PceI AGGCCT 1 cut(s) 811
PkrI GCNGC 8 cut(s) 105, 124, 239, 506, 509, 584, 806, 1008
PleI GAGTC 2 cut(s) 634, 961
PpsI GAGTC 2 cut(s) 634, 961
Ppu21I YACGTR 1 cut(s) 432
PpuMI RGGWCCY 1 cut(s) 1066
PshAI GACNNNNGTC 1 cut(s) 554
Psp5II RGGWCCY 1 cut(s) 1066
Psp6I CCWGG 1 cut(s) 931
PspGI CCWGG 1 cut(s) 931
PspN4I GGNNCC 4 cut(s) 309, 900, 980, 1068
PspPI GGNCC 6 cut(s) 668, 794, 884, 899, 929, 1066
PspPPI RGGWCCY 1 cut(s) 1066
PstNI CAGNNNCTG 1 cut(s) 938
PsuI RGATCY 4 cut(s) 55, 183, 295, 719
PvuII CAGCTG 1 cut(s) 905
RsaI GTAC 4 cut(s) 419, 430, 434, 909
RsaNI GTAC 4 cut(s) 418, 429, 433, 908
RseI CAYNNNNRTG 1 cut(s) 1050
SaqAI TTAA 2 cut(s) 231, 252
SatI GCNGC 8 cut(s) 104, 123, 238, 505, 508, 583, 805, 1007
Sau3AI GATC 6 cut(s) 55, 162, 183, 220, 295, 719
Sau96I GGNCC 6 cut(s) 668, 794, 884, 899, 929, 1066
SchI GAGTC 2 cut(s) 635, 961
ScrFI CCNGG 6 cut(s) 633, 746, 747, 798, 933, 1070
SduI GDGCHC 2 cut(s) 27, 379
SfaNI GCATC 2 cut(s) 34, 931
SinI GGWCC 2 cut(s) 668, 1066
SmaI CCCGGG 1 cut(s) 747
SmiMI CAYNNNNRTG 1 cut(s) 1050
SnaBI TACGTA 1 cut(s) 432
Sse9I AATT 4 cut(s) 197, 316, 621, 957
SseBI AGGCCT 1 cut(s) 811
SspMI CTAG 5 cut(s) 29, 527, 665, 767, 917
StuI AGGCCT 1 cut(s) 811
StyD4I CCNGG 6 cut(s) 631, 744, 745, 796, 931, 1068
StyI CCWWGG 4 cut(s) 399, 424, 982, 1020
TaaI ACNGT 2 cut(s) 287, 727
TaiI ACGT 3 cut(s) 228, 434, 716
TasI AATT 4 cut(s) 197, 316, 621, 957
TatI WGTACW 1 cut(s) 907
TauI GCSGC 1 cut(s) 510
Tru1I TTAA 2 cut(s) 231, 252
Tru9I TTAA 2 cut(s) 231, 252
TseFI GTSAC 4 cut(s) 536, 709, 854, 1072
TseI GCWGC 7 cut(s) 103, 122, 237, 504, 582, 804, 1006
Tsp45I GTSAC 4 cut(s) 536, 709, 854, 1072
TspDTI ATGAA 1 cut(s) 1034
TspGWI ACGGA 3 cut(s) 99, 155, 698
TspMI CCCGGG 1 cut(s) 745
VneI GTGCAC 1 cut(s) 23
VpaK11BI GGWCC 2 cut(s) 668, 1066
XapI RAATTY 2 cut(s) 316, 957
XcmI CCANNNNNNNNNTGG 1 cut(s) 268
XmaI CCCGGG 1 cut(s) 745
XspI CTAG 5 cut(s) 29, 527, 665, 767, 917
ZraI GACGTC 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.