Rorug02G0156000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000123
Physical Location & Seq
Forward (+)
13905798 .. 13908324
2527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0156000.1

Sequence Viewer

Length: 1977 bp
ATGAGTTTCCATCCTCTCACTTCATCTATCATCATTCTCGCCAATTTTTGTTGCATTTCTGTGATCCTTGCTCAGCAGCCTTATGAAGGACAAGCCTTCACAGATTGTTACAATCCAAACGTGTCGAAATCCCTTTTTGGATACACCTGCAATGGCTTCAACAGAAGTTGCCAAACTTACCTCACCTTCAGATCACAGCCTCCTTACACCACTGTTTCTTCCATCGCCAATATGTTGGCTTCTGACCCATCTCAGCTTGCAGAAATCAACTCGGTTTCTGAGTCCGCAACATTTGCGACAAACCAGTTGGTGCTTGTTCCAGTCACCTGTTCTTGCTCAGGTCAGTACTATCAGCTAAACACATCTCATGTTGTTGTTCATGGTGATACATTTTTAGTAATTGGAAACAATACATTTCAAGGCCTCTCAACATGTCAAGCTATGATGCAGCAGAACAGTAATCTCACCACAAAGAATTTGTATACTGGTACTAGACTCAGTGTTCCCCTTAGATGTGCTTGTCCCACTAAGAACCAAACTGATATGGGAATCAATTATCTCATGAGTTACTTAGTAACAACTGGTGATTATGTTTCAAAGATTAGTGATAGATTTGATGCAGATACAGGAAGGACTCTTGAAGCCAATGAGCTTTCAGAGAAATTCCCTAACATTTATCCCTTCACCACACTCTTAGTTCCTTTAAAAAACCCTCCATCTAGTTCTCAAACCATAGAGCCACCTTCATCATCACCGCCATCACCTCCGGCTGTCCCTCCAGCTGCCTCGAAGAACTCAAAGAAAACATGGGTTTATGTAGTTGCTGGGGCTATTGGAGGAGGTGGTGTTGTTTTGGTAATAGGCTTCCTCATCTTCTTCACATTCTTCCGCAGAAGAAGTAAGAAGAAGGCTGATACAGTTGTTGTATCGGAAAGCTTTGAGGCGCTTGAGAAACCAGTACAGAAAATAGGGGATGAAAATTCTGAATCTCAGGACTTTTTAGAGTCTATATCTAGAGACATAGCTCACATGGCTCTATCCCTCAAAGTTTACAAATTTGAGGAACTGCAAAGTGCAACAGAGAACTTCAGCTCCAGTTGTTTGATCAAAGGATCTGTTTTTCGCGGCATATTTGATGGGGATGTGGCTGCAATCAAGAAAATGAATGGGAATGTGTCCAAAGAAATCAATTTGCTAAACAAAATCAACCATTCTAATCTGATTCGTCTCTCCGGGGTTTGCTTTAATGATGGTCATTGGTATCTGATATATGAGTACGCTGTCAATGGACCCTTGAGTAATTGGATTTATTTTGAAGACAATGATGGGAAGATTTTGAGTTGGACACAAAGAGTGCAGATTATGTTGGATGTGGCCTCAGGGCTTAATTATCTGCACAGCTTCACCACTCCTCCTCATGTCCACAAGGACATAAAGAGCAGTAACATTCTTCTTGACAGTGATTTCAGGGCCAAGATTGCGAATTTTGGTCTAGCAAGGTCAGCTGGTGCGCAAGACGGTCACTTTTCTTTGACGAATCACATTGTTGGAACGATAGGGTACATGGCTCCTGAGTACTTAGAAAATGGTTTGATCTCCACAAAGCTTGATGTCTACGCATTTGGAGCACTCATGTTGGAATTACTCACCGGAAAAGAGGCTGCGGTGCTTTTTGAACAAAATGTGCACTTGTCTGATATACTGAACTCTTTGCTTAACAATGACGATGGAGGACAGAGTTTGCGGCAGTTCATGGATCCTGCTTTGCAAGAGAATTATCCTCAAGAGTTTGCTATTTTTGTGATCAGGTTGATTGATAGTTGCTTGAAGAAAAACCCAGGATCTCGCCCAGACATGAATGAGATGGTGCAGTTTCTCTCAAGAACCATGAGTAATTCACTGACTTGGGAATTGTCAAGCAACACCTCAGGCTACCAAGGTTCAGCGGTAGTTCTTGATGGTACAGAAACTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

658

Amino Acids

72.4

Weight (kDa)

5.61

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LysM1_NFP_LYK PF23446 56 - 112 5.5e-20 NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5 PF23472 116 - 171 5.4e-22 LYK3/4/5 LysM2 domain
LysM3_LYK4_5 PF23473 186 - 235 2.3e-20 LYK4/5 LysM3 domain
Pkinase PF00069 386 - 624 1.1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 389 - 626 3.6e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 155
Acc16I TGCGCA 1 cut(s) 1512
Acc36I ACCTGC 1 cut(s) 155
AccI GTMKAC 2 cut(s) 482, 1614
AccII CGCG 1 cut(s) 1125
AciI CCGC 7 cut(s) 285, 755, 889, 1125, 1664, 1744, 1946
AclWI GGATC 5 cut(s) 58, 1120, 1751, 1764, 1849
AcsI RAATTY 5 cut(s) 475, 662, 979, 1055, 1483
AcuI CTGAAG 2 cut(s) 172, 1072
AfaI GTAC 7 cut(s) 347, 490, 960, 1277, 1562, 1577, 1963
AfiI CCNNNNNNNGG 1 cut(s) 86
AflIII ACRYGT 2 cut(s) 120, 431
AgsI TTSAA 7 cut(s) 160, 419, 597, 641, 1316, 1676, 1828
AjnI CCWGG 1 cut(s) 1837
AloI GAACNNNNNNTCC 2 cut(s) 1076, 1108
Alw21I GWGCWC 2 cut(s) 1630, 1689
Alw26I GTCTC 2 cut(s) 1011, 1232
Alw44I GTGCAC 1 cut(s) 1685
AlwI GGATC 5 cut(s) 58, 1120, 1751, 1764, 1849
AlwNI CAGNNNCTG 1 cut(s) 1970
AoxI GGCC 3 cut(s) 421, 1374, 1470
ApaLI GTGCAC 1 cut(s) 1685
ApeKI GCWGC 5 cut(s) 76, 448, 782, 1148, 1661
ApoI RAATTY 5 cut(s) 475, 662, 979, 1055, 1483
AspLEI GCGC 2 cut(s) 946, 1513
AspS9I GGNCC 2 cut(s) 1289, 1470
AsuC2I CCSGG 1 cut(s) 1234
AvaII GGWCC 1 cut(s) 1289
AxyI CCTNAGG 2 cut(s) 1378, 1927
BaeGI GKGCMC 1 cut(s) 1689
BaeI ACNNNNGTAYC 2 cut(s) 906, 939
BamHI GGATCC 1 cut(s) 1756
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 2 cut(s) 1630, 1689
BbvI GCAGC 5 cut(s) 88, 460, 769, 1135, 1648
BciT130I CCWGG 1 cut(s) 1839
BciVI GTATCC 1 cut(s) 134
BclI TGATCA 2 cut(s) 1104, 1803
BcnI CCSGG 1 cut(s) 1234
BcoDI GTCTC 2 cut(s) 1011, 1232
BfaI CTAG 4 cut(s) 492, 720, 1014, 1493
BfoI RGCGCY 1 cut(s) 947
BfuAI ACCTGC 1 cut(s) 155
BfuI GTATCC 1 cut(s) 134
BisI GCNGC 7 cut(s) 77, 449, 783, 1126, 1149, 1662, 1745
BlpI GCTNAGC 1 cut(s) 72
BlsI GCNGC 7 cut(s) 78, 450, 784, 1127, 1150, 1663, 1746
BmcAI AGTACT 2 cut(s) 347, 1577
Bme1390I CCNGG 2 cut(s) 1234, 1839
Bme18I GGWCC 1 cut(s) 1289
BmgT120I GGNCC 2 cut(s) 1289, 1470
BmiI GGNNCC 3 cut(s) 1291, 1569, 1758
BmrFI CCNGG 2 cut(s) 1234, 1839
BmsI GCATC 2 cut(s) 435, 607
BpiI GAAGAC 1 cut(s) 1323
BpmI CTGGAG 2 cut(s) 762, 1078
Bpu10I CCTNAGC 1 cut(s) 337
Bpu1102I GCTNAGC 1 cut(s) 72
BpuEI CTTGAG 4 cut(s) 968, 1315, 1767, 1864
BpuMI CCSGG 1 cut(s) 1234
BsaJI CCNNGG 3 cut(s) 1233, 1837, 1936
BsaWI WCCGGW 1 cut(s) 1649
BsaXI ACNNNNNCTCC 6 cut(s) 831, 861, 1076, 1106, 1396, 1426
Bsc4I CCNNNNNNNGG 1 cut(s) 86
Bse1I ACTGG 7 cut(s) 304, 320, 490, 586, 956, 1095, 1975
Bse21I CCTNAGG 2 cut(s) 1378, 1927
Bse3DI GCAATG 1 cut(s) 157
BseBI CCWGG 1 cut(s) 1839
BseDI CCNNGG 3 cut(s) 1233, 1837, 1936
BseGI GGATG 4 cut(s) 10, 979, 1147, 1375
BseLI CCNNNNNNNGG 1 cut(s) 86
BseMI GCAATG 1 cut(s) 157
BseMII CTCAG 9 cut(s) 86, 266, 270, 351, 511, 1004, 1392, 1563, 1941
BseNI ACTGG 7 cut(s) 304, 320, 490, 586, 956, 1095, 1975
BseRI GAGGAG 3 cut(s) 852, 1401, 1404
BseSI GKGCMC 1 cut(s) 1689
BseXI GCAGC 5 cut(s) 88, 460, 769, 1135, 1648
BseYI CCCAGC 1 cut(s) 824
BsgI GTGCAG 3 cut(s) 1376, 1379, 1889
Bsh1236I CGCG 1 cut(s) 1125
BshFI GGCC 3 cut(s) 423, 1376, 1472
BsiHKAI GWGCWC 2 cut(s) 1630, 1689
BsiSI CCGG 3 cut(s) 767, 1233, 1650
BslFI GGGAC 2 cut(s) 507, 758
BslI CCNNNNNNNGG 1 cut(s) 86
BsmAI GTCTC 2 cut(s) 1011, 1232
BsmBI CGTCTC 1 cut(s) 1232
BsmFI GGGAC 2 cut(s) 507, 758
BsnI GGCC 3 cut(s) 423, 1376, 1472
Bsp1286I GDGCHC 2 cut(s) 1630, 1689
Bsp143I GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
Bsp1720I GCTNAGC 1 cut(s) 72
BspACI CCGC 7 cut(s) 285, 755, 889, 1125, 1664, 1744, 1946
BspANI GGCC 3 cut(s) 423, 1376, 1472
BspCNI CTCAG 9 cut(s) 85, 265, 271, 350, 510, 1003, 1391, 1564, 1940
BspFNI CGCG 1 cut(s) 1125
BspHI TCATGA 1 cut(s) 561
BspLI GGNNCC 3 cut(s) 1291, 1569, 1758
BspMI ACCTGC 1 cut(s) 155
BspPI GGATC 5 cut(s) 58, 1120, 1751, 1764, 1849
BsrDI GCAATG 1 cut(s) 157
BsrI ACTGG 7 cut(s) 304, 320, 490, 586, 956, 1095, 1975
BssECI CCNNGG 3 cut(s) 1233, 1837, 1936
BssMI GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
BssNAI GTATAC 1 cut(s) 483
BssT1I CCWWGG 1 cut(s) 1936
Bst1107I GTATAC 1 cut(s) 483
Bst2UI CCWGG 1 cut(s) 1839
Bst4CI ACNGT 5 cut(s) 214, 458, 919, 1460, 1520
BstAPI GCANNNNNTGC 1 cut(s) 293
BstC8I GCNNGC 1 cut(s) 258
BstENI CCTNNNNNAGG 1 cut(s) 84
BstF5I GGATG 4 cut(s) 10, 979, 1147, 1375
BstFNI CGCG 1 cut(s) 1125
BstH2I RGCGCY 1 cut(s) 947
BstHHI GCGC 2 cut(s) 946, 1513
BstKTI GATC 8 cut(s) 66, 194, 1107, 1115, 1596, 1759, 1806, 1844
BstMAI GTCTC 2 cut(s) 1011, 1232
BstMBI GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
BstMWI GCNNNNNNNGC 5 cut(s) 293, 1031, 1478, 1502, 1625
BstNI CCWGG 1 cut(s) 1839
BstNSI RCATGY 1 cut(s) 435
BstSCI CCNGG 2 cut(s) 1232, 1837
BstSLI GKGCMC 1 cut(s) 1689
BstUI CGCG 1 cut(s) 1125
BstV1I GCAGC 5 cut(s) 88, 460, 769, 1135, 1648
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 3 cut(s) 1112, 1756, 1841
BstXI CCANNNNNNTGG 1 cut(s) 235
BstYI RGATCY 3 cut(s) 1112, 1756, 1841
BstZ17I GTATAC 1 cut(s) 483
Bsu36I CCTNAGG 2 cut(s) 1378, 1927
BsuI GTATCC 1 cut(s) 134
BsuRI GGCC 3 cut(s) 423, 1376, 1472
BtgZI GCGATG 1 cut(s) 208
BtsCI GGATG 4 cut(s) 10, 979, 1147, 1375
BtsIMutI CAGTG 4 cut(s) 210, 505, 1465, 1898
BveI ACCTGC 1 cut(s) 155
Cac8I GCNNGC 1 cut(s) 258
CaiI CAGNNNCTG 1 cut(s) 1970
CciI TCATGA 1 cut(s) 561
CfoI GCGC 2 cut(s) 946, 1513
Cfr13I GGNCC 2 cut(s) 1289, 1470
Csp6I GTAC 7 cut(s) 346, 489, 959, 1276, 1561, 1576, 1962
CspCI CAANNNNNGTGG 2 cut(s) 1588, 1623
CviQI GTAC 7 cut(s) 346, 489, 959, 1276, 1561, 1576, 1962
DpnI GATC 8 cut(s) 65, 193, 1106, 1114, 1595, 1758, 1805, 1843
DpnII GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
DraI TTTAAA 1 cut(s) 705
Eco130I CCWWGG 1 cut(s) 1936
Eco147I AGGCCT 1 cut(s) 423
Eco47I GGWCC 1 cut(s) 1289
Eco57I CTGAAG 2 cut(s) 172, 1072
Eco81I CCTNAGG 2 cut(s) 1378, 1927
EcoNI CCTNNNNNAGG 1 cut(s) 84
EcoRII CCWGG 1 cut(s) 1837
EcoT14I CCWWGG 1 cut(s) 1936
ErhI CCWWGG 1 cut(s) 1936
Esp3I CGTCTC 1 cut(s) 1232
FaqI GGGAC 2 cut(s) 507, 758
FbaI TGATCA 2 cut(s) 1104, 1803
FblI GTMKAC 2 cut(s) 482, 1614
Fnu4HI GCNGC 7 cut(s) 77, 449, 783, 1126, 1149, 1662, 1745
FokI GGATG 3 cut(s) 986, 1154, 1382
Fsp4HI GCNGC 7 cut(s) 77, 449, 783, 1126, 1149, 1662, 1745
FspBI CTAG 4 cut(s) 492, 720, 1014, 1493
FspI TGCGCA 1 cut(s) 1512
GlaI GCGC 2 cut(s) 945, 1512
GluI GCNGC 7 cut(s) 77, 449, 783, 1126, 1149, 1662, 1745
GsaI CCCAGC 1 cut(s) 828
GsuI CTGGAG 2 cut(s) 762, 1078
HaeII RGCGCY 1 cut(s) 947
HaeIII GGCC 3 cut(s) 423, 1376, 1472
HapII CCGG 3 cut(s) 767, 1233, 1650
HhaI GCGC 2 cut(s) 946, 1513
Hin6I GCGC 2 cut(s) 944, 1511
HinP1I GCGC 2 cut(s) 944, 1511
HindIII AAGCTT 2 cut(s) 934, 1604
HinfI GANTC 8 cut(s) 281, 495, 549, 634, 986, 1004, 1222, 1537
HpaII CCGG 3 cut(s) 767, 1233, 1650
Hpy166II GTNNAC 5 cut(s) 483, 1051, 1423, 1615, 1687
Hpy188I TCNGA 9 cut(s) 191, 244, 280, 658, 931, 985, 1221, 1266, 1696
Hpy8I GTNNAC 5 cut(s) 483, 1051, 1423, 1615, 1687
HpyAV CCTTC 7 cut(s) 80, 106, 196, 624, 691, 753, 901
HpyCH4III ACNGT 5 cut(s) 214, 458, 919, 1460, 1520
HpyCH4IV ACGT 1 cut(s) 120
HpyF10VI GCNNNNNNNGC 5 cut(s) 293, 1031, 1478, 1502, 1625
HpySE526I ACGT 1 cut(s) 120
HspAI GCGC 2 cut(s) 944, 1511
Ksp22I TGATCA 2 cut(s) 1104, 1803
Kzo9I GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
LmnI GCTCC 3 cut(s) 1097, 1573, 1625
Lsp1109I GCAGC 5 cut(s) 88, 460, 769, 1135, 1648
LweI GCATC 2 cut(s) 435, 607
MaeI CTAG 4 cut(s) 492, 720, 1014, 1493
MaeII ACGT 1 cut(s) 120
MaeIII GTNAC 6 cut(s) 107, 322, 566, 574, 1442, 1520
MalI GATC 8 cut(s) 65, 193, 1106, 1114, 1595, 1758, 1805, 1843
MboI GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
MflI RGATCY 3 cut(s) 1112, 1756, 1841
MhlI GDGCHC 2 cut(s) 1630, 1689
MlyI GAGTC 4 cut(s) 290, 489, 628, 1013
MmeI TCCRAC 4 cut(s) 1322, 1347, 1528, 1617
MseI TTAA 4 cut(s) 704, 1245, 1386, 1716
MslI CAYNNNNRTG 1 cut(s) 59
MspA1I CMGCKG 3 cut(s) 782, 1505, 1946
MspI CCGG 3 cut(s) 767, 1233, 1650
MspR9I CCNGG 2 cut(s) 1234, 1839
MvaI CCWGG 1 cut(s) 1839
MvnI CGCG 1 cut(s) 1125
MwoI GCNNNNNNNGC 5 cut(s) 293, 1031, 1478, 1502, 1625
NciI CCSGG 1 cut(s) 1234
NdeII GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
NlaIV GGNNCC 3 cut(s) 1291, 1569, 1758
NmuCI GTSAC 2 cut(s) 322, 1520
NsbI TGCGCA 1 cut(s) 1512
NspI RCATGY 1 cut(s) 435
PagI TCATGA 1 cut(s) 561
PaqCI CACCTGC 1 cut(s) 155
PceI AGGCCT 1 cut(s) 423
PciI ACATGT 1 cut(s) 431
PfeI GAWTC 4 cut(s) 549, 986, 1222, 1537
PkrI GCNGC 7 cut(s) 78, 450, 784, 1127, 1150, 1663, 1746
PleI GAGTC 4 cut(s) 289, 489, 628, 1012
PpsI GAGTC 4 cut(s) 289, 489, 628, 1012
PscI ACATGT 1 cut(s) 431
Psp6I CCWGG 1 cut(s) 1837
PspFI CCCAGC 1 cut(s) 824
PspGI CCWGG 1 cut(s) 1837
PspN4I GGNNCC 3 cut(s) 1291, 1569, 1758
PspPI GGNCC 2 cut(s) 1289, 1470
PstNI CAGNNNCTG 1 cut(s) 1970
PsuI RGATCY 3 cut(s) 1112, 1756, 1841
PvuII CAGCTG 2 cut(s) 782, 1505
RsaI GTAC 7 cut(s) 347, 490, 960, 1277, 1562, 1577, 1963
RsaNI GTAC 7 cut(s) 346, 489, 959, 1276, 1561, 1576, 1962
RseI CAYNNNNRTG 1 cut(s) 59
SaqAI TTAA 4 cut(s) 704, 1245, 1386, 1716
SatI GCNGC 7 cut(s) 77, 449, 783, 1126, 1149, 1662, 1745
Sau3AI GATC 8 cut(s) 63, 191, 1104, 1112, 1593, 1756, 1803, 1841
Sau96I GGNCC 2 cut(s) 1289, 1470
ScaI AGTACT 2 cut(s) 347, 1577
SchI GAGTC 4 cut(s) 290, 489, 628, 1013
ScrFI CCNGG 2 cut(s) 1234, 1839
SduI GDGCHC 2 cut(s) 1630, 1689
SfaNI GCATC 2 cut(s) 435, 607
SinI GGWCC 1 cut(s) 1289
SmiMI CAYNNNNRTG 1 cut(s) 59
SmlI CTYRAG 4 cut(s) 947, 1294, 1782, 1879
SmoI CTYRAG 4 cut(s) 947, 1294, 1782, 1879
SseBI AGGCCT 1 cut(s) 423
SsiI CCGC 7 cut(s) 285, 755, 889, 1125, 1664, 1744, 1946
SspMI CTAG 4 cut(s) 492, 720, 1014, 1493
StuI AGGCCT 1 cut(s) 423
StyD4I CCNGG 2 cut(s) 1232, 1837
StyI CCWWGG 1 cut(s) 1936
TaaI ACNGT 5 cut(s) 214, 458, 919, 1460, 1520
TaiI ACGT 1 cut(s) 123
TaqI TCGA 2 cut(s) 125, 788
TatI WGTACW 3 cut(s) 345, 958, 1575
TauI GCSGC 2 cut(s) 1128, 1747
TfiI GAWTC 4 cut(s) 549, 986, 1222, 1537
Tru1I TTAA 4 cut(s) 704, 1245, 1386, 1716
Tru9I TTAA 4 cut(s) 704, 1245, 1386, 1716
TscAI CASTG 4 cut(s) 217, 505, 1465, 1905
TseFI GTSAC 2 cut(s) 322, 1520
TseI GCWGC 5 cut(s) 76, 448, 782, 1148, 1661
Tsp45I GTSAC 2 cut(s) 322, 1520
TspDTI ATGAA 8 cut(s) 12, 99, 368, 735, 990, 1178, 1741, 1871
TspRI CASTG 4 cut(s) 217, 505, 1465, 1905
VneI GTGCAC 1 cut(s) 1685
VpaK11BI GGWCC 1 cut(s) 1289
XagI CCTNNNNNAGG 1 cut(s) 84
XapI RAATTY 5 cut(s) 475, 662, 979, 1055, 1483
XbaI TCTAGA 1 cut(s) 1013
XceI RCATGY 1 cut(s) 435
XmiI GTMKAC 2 cut(s) 482, 1614
XspI CTAG 4 cut(s) 492, 720, 1014, 1493
ZrmI AGTACT 2 cut(s) 347, 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.