Zinc knuckle
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 395 |
| AciI | CCGC | 4 cut(s) | 5, 69, 152, 479 |
| AclI | AACGTT | 1 cut(s) | 426 |
| AclWI | GGATC | 2 cut(s) | 73, 187 |
| AfaI | GTAC | 1 cut(s) | 278 |
| AfeI | AGCGCT | 1 cut(s) | 325 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| AgeI | ACCGGT | 1 cut(s) | 127 |
| AgsI | TTSAA | 2 cut(s) | 178, 232 |
| AjnI | CCWGG | 2 cut(s) | 161, 252 |
| Alw26I | GTCTC | 1 cut(s) | 329 |
| AlwI | GGATC | 2 cut(s) | 73, 187 |
| Aor51HI | AGCGCT | 1 cut(s) | 325 |
| AoxI | GGCC | 1 cut(s) | 268 |
| AsiGI | ACCGGT | 1 cut(s) | 127 |
| AspLEI | GCGC | 2 cut(s) | 326, 396 |
| AspS9I | GGNCC | 2 cut(s) | 269, 481 |
| AsuHPI | GGTGA | 3 cut(s) | 142, 166, 256 |
| AvaII | GGWCC | 1 cut(s) | 481 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 268, 301 |
| BccI | CCATC | 3 cut(s) | 8, 13, 308 |
| BciT130I | CCWGG | 2 cut(s) | 163, 254 |
| BclI | TGATCA | 2 cut(s) | 132, 400 |
| BcoDI | GTCTC | 1 cut(s) | 329 |
| BfmI | CTRYAG | 1 cut(s) | 280 |
| BfoI | RGCGCY | 1 cut(s) | 327 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 2 cut(s) | 163, 254 |
| Bme18I | GGWCC | 1 cut(s) | 481 |
| BmgT120I | GGNCC | 2 cut(s) | 269, 481 |
| BmiI | GGNNCC | 1 cut(s) | 224 |
| BmrFI | CCNGG | 2 cut(s) | 163, 254 |
| BmsI | GCATC | 3 cut(s) | 31, 282, 466 |
| BsaI | GGTCTC | 1 cut(s) | 329 |
| BsaJI | CCNNGG | 1 cut(s) | 272 |
| BsaWI | WCCGGW | 1 cut(s) | 127 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| Bse118I | RCCGGY | 1 cut(s) | 127 |
| Bse1I | ACTGG | 1 cut(s) | 484 |
| Bse3DI | GCAATG | 1 cut(s) | 403 |
| BseBI | CCWGG | 2 cut(s) | 163, 254 |
| BseDI | CCNNGG | 1 cut(s) | 272 |
| BseGI | GGATG | 3 cut(s) | 24, 46, 481 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| BseMI | GCAATG | 1 cut(s) | 403 |
| BseMII | CTCAG | 1 cut(s) | 371 |
| BseNI | ACTGG | 1 cut(s) | 484 |
| BseRI | GAGGAG | 2 cut(s) | 215, 484 |
| BsgI | GTGCAG | 1 cut(s) | 329 |
| BshFI | GGCC | 1 cut(s) | 270 |
| BshTI | ACCGGT | 1 cut(s) | 127 |
| BsiSI | CCGG | 2 cut(s) | 128, 332 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 64, 168, 202, 232 |
| BsmAI | GTCTC | 1 cut(s) | 329 |
| BsnI | GGCC | 1 cut(s) | 270 |
| Bso31I | GGTCTC | 1 cut(s) | 329 |
| Bsp143I | GATC | 4 cut(s) | 78, 132, 192, 400 |
| BspACI | CCGC | 4 cut(s) | 5, 69, 152, 479 |
| BspANI | GGCC | 1 cut(s) | 270 |
| BspCNI | CTCAG | 1 cut(s) | 372 |
| BspLI | GGNNCC | 1 cut(s) | 224 |
| BspPI | GGATC | 2 cut(s) | 73, 187 |
| BspTNI | GGTCTC | 1 cut(s) | 329 |
| BsrDI | GCAATG | 1 cut(s) | 403 |
| BsrFI | RCCGGY | 1 cut(s) | 127 |
| BsrI | ACTGG | 1 cut(s) | 484 |
| BssAI | RCCGGY | 1 cut(s) | 127 |
| BssECI | CCNNGG | 1 cut(s) | 272 |
| BssMI | GATC | 4 cut(s) | 78, 132, 192, 400 |
| BssT1I | CCWWGG | 1 cut(s) | 272 |
| Bst2UI | CCWGG | 2 cut(s) | 163, 254 |
| Bst4CI | ACNGT | 1 cut(s) | 284 |
| BstDEI | CTNAG | 1 cut(s) | 380 |
| BstF5I | GGATG | 3 cut(s) | 24, 46, 481 |
| BstH2I | RGCGCY | 1 cut(s) | 327 |
| BstHHI | GCGC | 2 cut(s) | 326, 396 |
| BstKTI | GATC | 4 cut(s) | 81, 135, 195, 403 |
| BstMAI | GTCTC | 1 cut(s) | 329 |
| BstMBI | GATC | 4 cut(s) | 78, 132, 192, 400 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 29 |
| BstNI | CCWGG | 2 cut(s) | 163, 254 |
| BstSCI | CCNGG | 2 cut(s) | 161, 252 |
| BstSFI | CTRYAG | 1 cut(s) | 280 |
| BsuRI | GGCC | 1 cut(s) | 270 |
| BtsCI | GGATG | 3 cut(s) | 24, 46, 481 |
| CfoI | GCGC | 2 cut(s) | 326, 396 |
| Cfr10I | RCCGGY | 1 cut(s) | 127 |
| Cfr13I | GGNCC | 2 cut(s) | 269, 481 |
| CsiI | ACCWGGT | 1 cut(s) | 252 |
| Csp6I | GTAC | 1 cut(s) | 277 |
| CspAI | ACCGGT | 1 cut(s) | 127 |
| CviAII | CATG | 2 cut(s) | 263, 391 |
| CviJI | RGCY | 5 cut(s) | 57, 142, 270, 407, 449 |
| CviKI_1 | RGCY | 5 cut(s) | 57, 142, 270, 407, 449 |
| CviQI | GTAC | 1 cut(s) | 277 |
| DdeI | CTNAG | 1 cut(s) | 380 |
| DpnI | GATC | 4 cut(s) | 80, 134, 194, 402 |
| DpnII | GATC | 4 cut(s) | 78, 132, 192, 400 |
| EciI | GGCGGA | 1 cut(s) | 84 |
| Eco130I | CCWWGG | 1 cut(s) | 272 |
| Eco31I | GGTCTC | 1 cut(s) | 329 |
| Eco47I | GGWCC | 1 cut(s) | 481 |
| Eco47III | AGCGCT | 1 cut(s) | 325 |
| EcoRII | CCWGG | 2 cut(s) | 161, 252 |
| EcoT14I | CCWWGG | 1 cut(s) | 272 |
| ErhI | CCWWGG | 1 cut(s) | 272 |
| FaeI | CATG | 2 cut(s) | 266, 394 |
| FaiI | YATR | 4 cut(s) | 105, 169, 264, 392 |
| FatI | CATG | 2 cut(s) | 262, 390 |
| FbaI | TGATCA | 2 cut(s) | 132, 400 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| FokI | GGATG | 2 cut(s) | 31, 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| FspI | TGCGCA | 1 cut(s) | 395 |
| GlaI | GCGC | 2 cut(s) | 325, 395 |
| GluI | GCNGC | 1 cut(s) | 6 |
| HaeII | RGCGCY | 1 cut(s) | 327 |
| HaeIII | GGCC | 1 cut(s) | 270 |
| HapII | CCGG | 2 cut(s) | 128, 332 |
| HhaI | GCGC | 2 cut(s) | 326, 396 |
| Hin1II | CATG | 2 cut(s) | 266, 394 |
| Hin6I | GCGC | 2 cut(s) | 324, 394 |
| HinP1I | GCGC | 2 cut(s) | 324, 394 |
| HinfI | GANTC | 1 cut(s) | 25 |
| HpaII | CCGG | 2 cut(s) | 128, 332 |
| HphI | GGTGA | 3 cut(s) | 142, 166, 256 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 381, 417 |
| HpyAV | CCTTC | 2 cut(s) | 172, 367 |
| HpyCH4III | ACNGT | 1 cut(s) | 284 |
| HpyCH4IV | ACGT | 1 cut(s) | 426 |
| HpyCH4V | TGCA | 3 cut(s) | 44, 346, 466 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 29 |
| HpyF3I | CTNAG | 1 cut(s) | 380 |
| HpySE526I | ACGT | 1 cut(s) | 426 |
| Hsp92II | CATG | 2 cut(s) | 266, 394 |
| HspAI | GCGC | 2 cut(s) | 324, 394 |
| Ksp22I | TGATCA | 2 cut(s) | 132, 400 |
| Kzo9I | GATC | 4 cut(s) | 78, 132, 192, 400 |
| LpnPI | CCDG | 8 cut(s) | 141, 148, 175, 224, 239, 266, 345, 389 |
| LweI | GCATC | 3 cut(s) | 31, 282, 466 |
| MabI | ACCWGGT | 1 cut(s) | 252 |
| MaeII | ACGT | 1 cut(s) | 426 |
| MaeIII | GTNAC | 1 cut(s) | 284 |
| MalI | GATC | 4 cut(s) | 80, 134, 194, 402 |
| MboI | GATC | 4 cut(s) | 78, 132, 192, 400 |
| MboII | GAAGA | 2 cut(s) | 23, 251 |
| MluCI | AATT | 2 cut(s) | 227, 456 |
| MlyI | GAGTC | 1 cut(s) | 19 |
| MmeI | TCCRAC | 1 cut(s) | 18 |
| MseI | TTAA | 2 cut(s) | 410, 444 |
| MspI | CCGG | 2 cut(s) | 128, 332 |
| MspR9I | CCNGG | 2 cut(s) | 163, 254 |
| MvaI | CCWGG | 2 cut(s) | 163, 254 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 29 |
| NdeII | GATC | 4 cut(s) | 78, 132, 192, 400 |
| NlaIII | CATG | 2 cut(s) | 266, 394 |
| NlaIV | GGNNCC | 1 cut(s) | 224 |
| NsbI | TGCGCA | 1 cut(s) | 395 |
| PfoI | TCCNGGA | 1 cut(s) | 161 |
| PinAI | ACCGGT | 1 cut(s) | 127 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| Psp1406I | AACGTT | 1 cut(s) | 426 |
| Psp6I | CCWGG | 2 cut(s) | 161, 252 |
| PspGI | CCWGG | 2 cut(s) | 161, 252 |
| PspN4I | GGNNCC | 1 cut(s) | 224 |
| PspPI | GGNCC | 2 cut(s) | 269, 481 |
| RsaI | GTAC | 1 cut(s) | 278 |
| RsaNI | GTAC | 1 cut(s) | 277 |
| SaqAI | TTAA | 2 cut(s) | 410, 444 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 4 cut(s) | 78, 132, 192, 400 |
| Sau96I | GGNCC | 2 cut(s) | 269, 481 |
| SchI | GAGTC | 1 cut(s) | 19 |
| ScrFI | CCNGG | 2 cut(s) | 163, 254 |
| SetI | ASST | 5 cut(s) | 102, 246, 258, 360, 429 |
| SexAI | ACCWGGT | 1 cut(s) | 252 |
| SfaNI | GCATC | 3 cut(s) | 31, 282, 466 |
| SfcI | CTRYAG | 1 cut(s) | 280 |
| SinI | GGWCC | 1 cut(s) | 481 |
| Sse9I | AATT | 2 cut(s) | 227, 456 |
| SsiI | CCGC | 4 cut(s) | 5, 69, 152, 479 |
| StyD4I | CCNGG | 2 cut(s) | 161, 252 |
| StyI | CCWWGG | 1 cut(s) | 272 |
| TaaI | ACNGT | 1 cut(s) | 284 |
| TaiI | ACGT | 1 cut(s) | 429 |
| TaqI | TCGA | 1 cut(s) | 290 |
| TasI | AATT | 2 cut(s) | 227, 456 |
| TauI | GCSGC | 1 cut(s) | 8 |
| Tru1I | TTAA | 2 cut(s) | 410, 444 |
| Tru9I | TTAA | 2 cut(s) | 410, 444 |
| TspDTI | ATGAA | 1 cut(s) | 251 |
| TspGWI | ACGGA | 1 cut(s) | 185 |
| VpaK11BI | GGWCC | 1 cut(s) | 481 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 260 |