Rmu_sc0013803.1_g000022

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013803.1
OG0000123
Physical Location & Seq
Forward (+)
59004 .. 60297
1294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013803.1_g000022.1.cds

Sequence Viewer

Length: 999 bp
atgggggacgagaacacggtggctccttctgcactttctgaggaggccattgtgagccttgttggaggagaggatgcaatccatgattcattcttctacctttgtggtcggcttttatccaagaagacagtggatagcgaggtgaagaatcagattctctcaagcggtccatggttctacaacaactctatgttgctgctagcagactatgacggcttttcagatctcggggcagctctgctgcatctcctggaggtttgggtggcagtgaaggggttgcgcattggtatgcgcaacgagaaggccttaaccctaattggacgagcgttgggttccttcgttcgggttgatcagggggcggtgcagcggaaggatccgattcagatgatctatgtgctgtgtcgaacagcgcggtggaaggcgtcggaagcagctgtttctgggtcggttgctgggttagagatgttagtgacggttggactaagtgagccagaggtttctggggtggcggaagtggctggaacactggtgttgggatcaggttggcaggccgcgaggagctctgtatgtgttcctgaaaattcggcggcaaaccctaattttgaattagggttgacgggtgggttggttgggactgctcagcatggccttgggctggggttgcatgggattggaccggggctgcatgggactgggccggactactttactgatggggccaatataaatagccttgctgttgggctaaattcagaaaaacatcttaccttgggtgtgaaaaagaagagttttaagcctaggttggctttcatacctctggaatttcaccttgatgagttggtggaggttccgatttcgctagggacagctccaaagaaaaaaggccgtcctgttggacgaaggaataagcgtactttgaggaatgagaaagatgaaggtaacaatgatggtgcaaatattagctccaactcgccaaggaaggagctggctattgtttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

332

Amino Acids

35.22

Weight (kDa)

6.67

Isoelectric Point (pI)

29.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 281, 293
AccII CGCG 2 cut(s) 412, 554
AciI CCGC 7 cut(s) 165, 359, 367, 412, 509, 552, 587
AclWI GGATC 3 cut(s) 368, 381, 544
AcsI RAATTY 3 cut(s) 580, 748, 821
AcyI GRCGYC 1 cut(s) 422
AfaI GTAC 1 cut(s) 913
AfiI CCNNNNNNNGG 2 cut(s) 342, 655
AgsI TTSAA 1 cut(s) 605
AjnI CCWGG 1 cut(s) 249
AluBI AGCT 6 cut(s) 236, 434, 561, 869, 963, 985
AluI AGCT 6 cut(s) 236, 434, 561, 869, 963, 985
Alw21I GWGCWC 1 cut(s) 563
AlwI GGATC 3 cut(s) 368, 381, 544
Ama87I CYCGRG 1 cut(s) 227
AoxI GGCC 7 cut(s) 45, 303, 549, 646, 695, 717, 883
ApeKI GCWGC 6 cut(s) 196, 233, 241, 364, 431, 682
ApoI RAATTY 3 cut(s) 580, 748, 821
AspA2I CCTAGG 1 cut(s) 797
AspLEI GCGC 3 cut(s) 282, 294, 412
AspS9I GGNCC 4 cut(s) 167, 674, 695, 717
AsuC2I CCSGG 1 cut(s) 678
AsuHPI GGTGA 2 cut(s) 154, 818
AsuNHI GCTAGC 1 cut(s) 199
AvaI CYCGRG 1 cut(s) 227
AvaII GGWCC 2 cut(s) 167, 674
AvrII CCTAGG 1 cut(s) 797
BamHI GGATCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 563
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 1 cut(s) 563
BbvI GCAGC 6 cut(s) 183, 228, 245, 376, 443, 669
BccI CCATC 2 cut(s) 707, 941
BceAI ACGGC 2 cut(s) 229, 870
BciT130I CCWGG 1 cut(s) 251
BclI TGATCA 1 cut(s) 349
BcnI CCSGG 1 cut(s) 678
BfaI CTAG 3 cut(s) 200, 798, 860
BglII AGATCT 1 cut(s) 223
BisI GCNGC 8 cut(s) 197, 234, 242, 365, 432, 552, 588, 683
BlnI CCTAGG 1 cut(s) 797
BlpI GCTNAGC 1 cut(s) 639
BlsI GCNGC 8 cut(s) 198, 235, 243, 366, 433, 553, 589, 684
Bme1390I CCNGG 2 cut(s) 251, 678
Bme18I GGWCC 2 cut(s) 167, 674
BmeT110I CYCGRG 1 cut(s) 227
BmgT120I GGNCC 4 cut(s) 167, 674, 695, 717
BmiI GGNNCC 5 cut(s) 24, 334, 375, 718, 849
BmrFI CCNGG 2 cut(s) 251, 678
BmrI ACTGGG 1 cut(s) 702
BmsI GCATC 2 cut(s) 64, 253
BmtI GCTAGC 1 cut(s) 203
BmuI ACTGGG 1 cut(s) 702
BpiI GAAGAC 1 cut(s) 131
BpmI CTGGAG 1 cut(s) 272
Bpu1102I GCTNAGC 1 cut(s) 639
BpuEI CTTGAG 1 cut(s) 145
BpuMI CCSGG 1 cut(s) 678
BsaHI GRCGYC 1 cut(s) 422
BsaJI CCNNGG 6 cut(s) 170, 649, 677, 768, 797, 974
BsaXI ACNNNNNCTCC 2 cut(s) 7, 37
Bsc4I CCNNNNNNNGG 2 cut(s) 342, 655
Bse1I ACTGG 2 cut(s) 531, 697
BseBI CCWGG 1 cut(s) 251
BseDI CCNNGG 6 cut(s) 170, 649, 677, 768, 797, 974
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 2 cut(s) 342, 655
BseMII CTCAG 2 cut(s) 30, 653
BseNI ACTGG 2 cut(s) 531, 697
BseRI GAGGAG 3 cut(s) 56, 81, 571
BseXI GCAGC 6 cut(s) 183, 228, 245, 376, 443, 669
BseYI CCCAGC 2 cut(s) 452, 655
BsgI GTGCAG 2 cut(s) 15, 383
Bsh1236I CGCG 2 cut(s) 412, 554
BshFI GGCC 7 cut(s) 47, 305, 551, 648, 697, 719, 885
BsiHKAI GWGCWC 1 cut(s) 563
BsiHKCI CYCGRG 1 cut(s) 227
BsiSI CCGG 2 cut(s) 677, 698
BslFI GGGAC 4 cut(s) 20, 646, 703, 877
BslI CCNNNNNNNGG 2 cut(s) 342, 655
BsmFI GGGAC 4 cut(s) 20, 646, 703, 877
BsnI GGCC 7 cut(s) 47, 305, 551, 648, 697, 719, 885
BsoBI CYCGRG 1 cut(s) 227
Bsp1286I GDGCHC 1 cut(s) 563
Bsp143I GATC 5 cut(s) 223, 349, 373, 387, 536
Bsp1720I GCTNAGC 1 cut(s) 639
Bsp19I CCATGG 1 cut(s) 170
BspACI CCGC 7 cut(s) 165, 359, 367, 412, 509, 552, 587
BspANI GGCC 7 cut(s) 47, 305, 551, 648, 697, 719, 885
BspCNI CTCAG 2 cut(s) 31, 652
BspFNI CGCG 2 cut(s) 412, 554
BspLI GGNNCC 5 cut(s) 24, 334, 375, 718, 849
BspOI GCTAGC 1 cut(s) 203
BspPI GGATC 3 cut(s) 368, 381, 544
BsrI ACTGG 2 cut(s) 531, 697
BssECI CCNNGG 6 cut(s) 170, 649, 677, 768, 797, 974
BssMI GATC 5 cut(s) 223, 349, 373, 387, 536
BssNI GRCGYC 1 cut(s) 422
BssT1I CCWWGG 5 cut(s) 170, 649, 768, 797, 974
Bst2UI CCWGG 1 cut(s) 251
Bst4CI ACNGT 3 cut(s) 19, 130, 475
Bst6I CTCTTC 1 cut(s) 779
BstACI GRCGYC 1 cut(s) 422
BstC8I GCNNGC 3 cut(s) 201, 549, 987
BstDEI CTNAG 3 cut(s) 39, 482, 639
BstDSI CCRYGG 1 cut(s) 170
BstF5I GGATG 1 cut(s) 79
BstFNI CGCG 2 cut(s) 412, 554
BstHHI GCGC 3 cut(s) 282, 294, 412
BstKTI GATC 5 cut(s) 226, 352, 376, 390, 539
BstMBI GATC 5 cut(s) 223, 349, 373, 387, 536
BstMWI GCNNNNNNNGC 4 cut(s) 29, 428, 515, 661
BstNI CCWGG 1 cut(s) 251
BstSCI CCNGG 2 cut(s) 249, 676
BstUI CGCG 2 cut(s) 412, 554
BstV1I GCAGC 6 cut(s) 183, 228, 245, 376, 443, 669
BstV2I GAAGAC 1 cut(s) 131
BstX2I RGATCY 2 cut(s) 223, 373
BstYI RGATCY 2 cut(s) 223, 373
BsuRI GGCC 7 cut(s) 47, 305, 551, 648, 697, 719, 885
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 3 cut(s) 135, 273, 524
Cac8I GCNNGC 3 cut(s) 201, 549, 987
CfoI GCGC 3 cut(s) 282, 294, 412
Cfr13I GGNCC 4 cut(s) 167, 674, 695, 717
CseI GACGC 1 cut(s) 411
Csp6I GTAC 1 cut(s) 912
CviAII CATG 5 cut(s) 83, 171, 644, 665, 686
CviQI GTAC 1 cut(s) 912
DdeI CTNAG 3 cut(s) 39, 482, 639
DpnI GATC 5 cut(s) 225, 351, 375, 389, 538
DpnII GATC 5 cut(s) 223, 349, 373, 387, 536
Eam1104I CTCTTC 1 cut(s) 779
EarI CTCTTC 1 cut(s) 779
EciI GGCGGA 1 cut(s) 524
Ecl136II GAGCTC 1 cut(s) 561
Eco130I CCWWGG 5 cut(s) 170, 649, 768, 797, 974
Eco147I AGGCCT 1 cut(s) 305
Eco24I GRGCYC 1 cut(s) 563
Eco47I GGWCC 2 cut(s) 167, 674
Eco53kI GAGCTC 1 cut(s) 561
Eco88I CYCGRG 1 cut(s) 227
EcoICRI GAGCTC 1 cut(s) 561
EcoRII CCWGG 1 cut(s) 249
EcoT14I CCWWGG 5 cut(s) 170, 649, 768, 797, 974
EcoT38I GRGCYC 1 cut(s) 563
ErhI CCWWGG 5 cut(s) 170, 649, 768, 797, 974
FaeI CATG 5 cut(s) 86, 174, 647, 668, 689
FaqI GGGAC 4 cut(s) 20, 646, 703, 877
FatI CATG 5 cut(s) 82, 170, 643, 664, 685
FbaI TGATCA 1 cut(s) 349
Fnu4HI GCNGC 8 cut(s) 197, 234, 242, 365, 432, 552, 588, 683
FokI GGATG 1 cut(s) 86
FriOI GRGCYC 1 cut(s) 563
Fsp4HI GCNGC 8 cut(s) 197, 234, 242, 365, 432, 552, 588, 683
FspBI CTAG 3 cut(s) 200, 798, 860
FspI TGCGCA 2 cut(s) 281, 293
GlaI GCGC 3 cut(s) 281, 293, 411
GluI GCNGC 8 cut(s) 197, 234, 242, 365, 432, 552, 588, 683
GsaI CCCAGC 2 cut(s) 456, 659
GsuI CTGGAG 1 cut(s) 272
HaeIII GGCC 7 cut(s) 47, 305, 551, 648, 697, 719, 885
HapII CCGG 2 cut(s) 677, 698
HgaI GACGC 1 cut(s) 411
HhaI GCGC 3 cut(s) 282, 294, 412
Hin1I GRCGYC 1 cut(s) 422
Hin1II CATG 5 cut(s) 86, 174, 647, 668, 689
Hin6I GCGC 3 cut(s) 280, 292, 410
HinP1I GCGC 3 cut(s) 280, 292, 410
HincII GTYRAC 1 cut(s) 615
HindII GTYRAC 1 cut(s) 615
HinfI GANTC 4 cut(s) 86, 148, 154, 379
HpaII CCGG 2 cut(s) 677, 698
HphI GGTGA 2 cut(s) 154, 818
Hpy166II GTNNAC 1 cut(s) 615
Hpy188I TCNGA 8 cut(s) 40, 153, 223, 378, 384, 427, 754, 852
Hpy188III TCNNGA 2 cut(s) 575, 818
Hpy8I GTNNAC 1 cut(s) 615
Hpy99I CGWCG 1 cut(s) 427
HpyAV CCTTC 9 cut(s) 36, 265, 295, 346, 364, 412, 894, 929, 973
HpyCH4III ACNGT 3 cut(s) 19, 130, 475
HpyCH4V TGCA 7 cut(s) 32, 77, 244, 364, 664, 685, 953
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 428, 515, 661
HpyF3I CTNAG 3 cut(s) 39, 482, 639
Hsp92I GRCGYC 1 cut(s) 422
Hsp92II CATG 5 cut(s) 86, 174, 647, 668, 689
HspAI GCGC 3 cut(s) 280, 292, 410
Ksp22I TGATCA 1 cut(s) 349
Kzo9I GATC 5 cut(s) 223, 349, 373, 387, 536
LmnI GCTCC 5 cut(s) 28, 558, 874, 968, 982
Lsp1109I GCAGC 6 cut(s) 183, 228, 245, 376, 443, 669
LweI GCATC 2 cut(s) 64, 253
MaeI CTAG 3 cut(s) 200, 798, 860
MaeIII GTNAC 2 cut(s) 469, 938
MalI GATC 5 cut(s) 225, 351, 375, 389, 538
MboI GATC 5 cut(s) 223, 349, 373, 387, 536
MboII GAAGA 4 cut(s) 85, 136, 157, 796
MflI RGATCY 2 cut(s) 223, 373
MhlI GDGCHC 1 cut(s) 563
MluCI AATT 6 cut(s) 315, 580, 598, 605, 748, 821
MmeI TCCRAC 5 cut(s) 43, 405, 457, 874, 990
MseI TTAA 3 cut(s) 308, 792, 997
MslI CAYNNNNRTG 2 cut(s) 287, 831
MspA1I CMGCKG 2 cut(s) 367, 434
MspI CCGG 2 cut(s) 677, 698
MspR9I CCNGG 2 cut(s) 251, 678
MvaI CCWGG 1 cut(s) 251
MvnI CGCG 2 cut(s) 412, 554
MwoI GCNNNNNNNGC 4 cut(s) 29, 428, 515, 661
NciI CCSGG 1 cut(s) 678
NcoI CCATGG 1 cut(s) 170
NdeII GATC 5 cut(s) 223, 349, 373, 387, 536
NheI GCTAGC 1 cut(s) 199
NlaIII CATG 5 cut(s) 86, 174, 647, 668, 689
NlaIV GGNNCC 5 cut(s) 24, 334, 375, 718, 849
NmuCI GTSAC 1 cut(s) 469
NsbI TGCGCA 2 cut(s) 281, 293
PceI AGGCCT 1 cut(s) 305
PfeI GAWTC 4 cut(s) 86, 148, 154, 379
PfoI TCCNGGA 1 cut(s) 249
PkrI GCNGC 8 cut(s) 198, 235, 243, 366, 433, 553, 589, 684
Psp124BI GAGCTC 1 cut(s) 563
Psp6I CCWGG 1 cut(s) 249
PspFI CCCAGC 2 cut(s) 452, 655
PspGI CCWGG 1 cut(s) 249
PspN4I GGNNCC 5 cut(s) 24, 334, 375, 718, 849
PspPI GGNCC 4 cut(s) 167, 674, 695, 717
PsuI RGATCY 2 cut(s) 223, 373
PvuII CAGCTG 1 cut(s) 434
RsaI GTAC 1 cut(s) 913
RsaNI GTAC 1 cut(s) 912
RseI CAYNNNNRTG 2 cut(s) 287, 831
SacI GAGCTC 1 cut(s) 563
SaqAI TTAA 3 cut(s) 308, 792, 997
SatI GCNGC 8 cut(s) 197, 234, 242, 365, 432, 552, 588, 683
Sau3AI GATC 5 cut(s) 223, 349, 373, 387, 536
Sau96I GGNCC 4 cut(s) 167, 674, 695, 717
ScrFI CCNGG 2 cut(s) 251, 678
SduI GDGCHC 1 cut(s) 563
SfaNI GCATC 2 cut(s) 64, 253
SinI GGWCC 2 cut(s) 167, 674
SmiMI CAYNNNNRTG 2 cut(s) 287, 831
SmlI CTYRAG 1 cut(s) 160
SmoI CTYRAG 1 cut(s) 160
Sse9I AATT 6 cut(s) 315, 580, 598, 605, 748, 821
SseBI AGGCCT 1 cut(s) 305
SsiI CCGC 7 cut(s) 165, 359, 367, 412, 509, 552, 587
SspI AATATT 1 cut(s) 958
SspMI CTAG 3 cut(s) 200, 798, 860
SstI GAGCTC 1 cut(s) 563
StuI AGGCCT 1 cut(s) 305
StyD4I CCNGG 2 cut(s) 249, 676
StyI CCWWGG 5 cut(s) 170, 649, 768, 797, 974
TaaI ACNGT 3 cut(s) 19, 130, 475
TaqI TCGA 1 cut(s) 403
TasI AATT 6 cut(s) 315, 580, 598, 605, 748, 821
TauI GCSGC 2 cut(s) 554, 590
TfiI GAWTC 4 cut(s) 86, 148, 154, 379
Tru1I TTAA 3 cut(s) 308, 792, 997
Tru9I TTAA 3 cut(s) 308, 792, 997
TscAI CASTG 3 cut(s) 135, 273, 531
TseFI GTSAC 1 cut(s) 469
TseI GCWGC 6 cut(s) 196, 233, 241, 364, 431, 682
Tsp45I GTSAC 1 cut(s) 469
TspDTI ATGAA 3 cut(s) 78, 799, 948
TspRI CASTG 3 cut(s) 135, 273, 531
VpaK11BI GGWCC 2 cut(s) 167, 674
XapI RAATTY 3 cut(s) 580, 748, 821
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XmaJI CCTAGG 1 cut(s) 797
XspI CTAG 3 cut(s) 200, 798, 860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.