Rmu_sc0021886.1_g000001

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021886.1
OG0000123
Physical Location & Seq
Reverse (-)
1 .. 5961
5961 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021886.1_g000001.1.cds

Sequence Viewer

Length: 1021 bp
atggagatggaatcggcgatggcgttggggaagggtgccaccggagccgagcgagatgcggggaaattgatcgagcttcgaattgtgatggcggcggaggaggctatcgtgcacctagttgggggcgaggatgcaatccaagatccttttttctatgtatgtggccggttgctctcccaaaaacgggtgttgcttccgtcgttttcggcggctatttccggtatctggggtttgaaagagcgggttttgatccgtgaggaggaaggagggatctttgtctttcaattcaaggagcaggagacgaaggatcacgtcctcaacggcggtccttggttttttaacaattccatgcttctcttggcggactatgatggtctccgggatctgacagaggttccactgaattcaatggaggtttgggtggcggtgaaaggtctgcgcgtggctatgcgcaatgcccgtgccctaaccttacttgggaactccttggggcgctttgtcaggtacgaccaaggtgcgttgcagaggaaggatccagtgcaaaggctccgggttgtgcacgacgtacgtcgccgtgtatgggctcgacgtaagtactcgttttcggcagcgatggcggtggacttagagttgaggtacgagaaatgccatggtatctgtcggggctgcggcttttttgaccacgggctgggttgctgtgacaatgccttgacggcggtcatggagtcaggagacgggtcgggctacactcctccagcgttggcaacaacgttggtggctgttgatgtggccggaattgagtcgcccggccggtctgaggggctgctggacgttgggctgggtacggagggctggacggaggaagctagggcgactgggtcggtgacgacgggacctgttgtggagccagcggctgccctgggattttcggcgggaaacctaggtttgaagttaggatttcctgttgggccgggtggcagcgggcctgaaggggaagttgggctgacttggggcctgggtg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

340

Amino Acids

36.47

Weight (kDa)

5.43

Isoelectric Point (pI)

36.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 452
AccB1I GGYRCC 1 cut(s) 35
AccB7I CCANNNNNTGG 1 cut(s) 688
AccBSI CCGCTC 1 cut(s) 241
AccII CGCG 1 cut(s) 441
AclI AACGTT 1 cut(s) 770
AclWI GGATC 7 cut(s) 137, 244, 278, 315, 390, 527, 540
AcoI YGGCCR 3 cut(s) 163, 789, 808
AcsI RAATTY 1 cut(s) 403
AcuI CTGAAG 1 cut(s) 1008
AfaI GTAC 5 cut(s) 506, 567, 596, 638, 844
AfiI CCNNNNNNNGG 9 cut(s) 121, 183, 184, 225, 259, 477, 580, 688, 817
AgsI TTSAA 5 cut(s) 235, 284, 289, 408, 949
AjiI CACGTC 1 cut(s) 313
AjnI CCWGG 2 cut(s) 918, 1014
AjuI GAANNNNNNNTTGG 2 cut(s) 981, 1013
AluBI AGCT 2 cut(s) 76, 866
AluI AGCT 2 cut(s) 76, 866
Alw21I GWGCWC 2 cut(s) 114, 561
Alw26I GTCTC 3 cut(s) 293, 380, 726
Alw44I GTGCAC 2 cut(s) 110, 557
AlwI GGATC 7 cut(s) 137, 244, 278, 315, 390, 527, 540
AlwNI CAGNNNCTG 1 cut(s) 914
AoxI GGCC 6 cut(s) 163, 789, 808, 968, 983, 1012
ApaLI GTGCAC 2 cut(s) 110, 557
ApeKI GCWGC 5 cut(s) 608, 666, 823, 914, 978
ApoI RAATTY 1 cut(s) 403
AspA2I CCTAGG 1 cut(s) 940
AspLEI GCGC 3 cut(s) 441, 453, 495
AspS9I GGNCC 5 cut(s) 326, 893, 968, 983, 1012
AsuC2I CCSGG 4 cut(s) 380, 551, 807, 972
AsuHPI GGTGA 2 cut(s) 439, 895
AsuII TTCGAA 1 cut(s) 79
AvaII GGWCC 2 cut(s) 326, 893
AvrII CCTAGG 1 cut(s) 940
BaeGI GKGCMC 3 cut(s) 114, 466, 561
BamHI GGATCC 1 cut(s) 532
BanI GGYRCC 1 cut(s) 35
BanII GRGCYC 1 cut(s) 586
Bbv12I GWGCWC 2 cut(s) 114, 561
BbvI GCAGC 5 cut(s) 620, 653, 810, 901, 990
BccI CCATC 4 cut(s) 13, 82, 365, 607
BceAI ACGGC 3 cut(s) 337, 558, 729
BcgI CGANNNNNNTGC 4 cut(s) 38, 72, 497, 531
BciT130I CCWGG 2 cut(s) 920, 1016
BcnI CCSGG 4 cut(s) 380, 551, 807, 972
BcoDI GTCTC 3 cut(s) 293, 380, 726
BfaI CTAG 3 cut(s) 116, 867, 941
BfoI RGCGCY 1 cut(s) 496
BglI GCCNNNNNGGC 1 cut(s) 713
BisI GCNGC 9 cut(s) 93, 210, 609, 667, 670, 824, 912, 915, 979
BlnI CCTAGG 1 cut(s) 940
BlsI GCNGC 9 cut(s) 94, 211, 610, 668, 671, 825, 913, 916, 980
BmcAI AGTACT 1 cut(s) 596
Bme1390I CCNGG 6 cut(s) 380, 551, 807, 920, 972, 1016
Bme18I GGWCC 2 cut(s) 326, 893
BmgBI CACGTC 1 cut(s) 313
BmgT120I GGNCC 5 cut(s) 326, 893, 968, 983, 1012
BmiI GGNNCC 8 cut(s) 37, 46, 396, 534, 548, 894, 906, 1013
BmrFI CCNGG 6 cut(s) 380, 551, 807, 920, 972, 1016
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 2 cut(s) 46, 121
BmuI ACTGGG 1 cut(s) 885
BoxI GACNNNNGTC 2 cut(s) 567, 716
BpmI CTGGAG 1 cut(s) 738
Bpu14I TTCGAA 1 cut(s) 79
BpuMI CCSGG 4 cut(s) 380, 551, 807, 972
BsaI GGTCTC 1 cut(s) 380
BsaJI CCNNGG 9 cut(s) 329, 486, 511, 649, 682, 918, 919, 940, 1015
BsaWI WCCGGW 2 cut(s) 41, 218
Bsc4I CCNNNNNNNGG 9 cut(s) 121, 183, 184, 225, 259, 477, 580, 688, 817
Bse118I RCCGGY 2 cut(s) 165, 810
Bse1I ACTGG 2 cut(s) 536, 880
Bse3DI GCAATG 1 cut(s) 460
BseBI CCWGG 2 cut(s) 920, 1016
BseDI CCNNGG 9 cut(s) 329, 486, 511, 649, 682, 918, 919, 940, 1015
BseGI GGATG 1 cut(s) 136
BseLI CCNNNNNNNGG 9 cut(s) 121, 183, 184, 225, 259, 477, 580, 688, 817
BseMI GCAATG 1 cut(s) 460
BseMII CTCAG 1 cut(s) 807
BseNI ACTGG 2 cut(s) 536, 880
BseRI GAGGAG 3 cut(s) 113, 272, 741
BseSI GKGCMC 3 cut(s) 114, 466, 561
BseX3I CGGCCG 1 cut(s) 808
BseXI GCAGC 5 cut(s) 620, 653, 810, 901, 990
BseYI CCCAGC 2 cut(s) 688, 838
Bsh1236I CGCG 1 cut(s) 441
Bsh1285I CGRYCG 1 cut(s) 811
BshFI GGCC 6 cut(s) 165, 791, 810, 970, 985, 1014
BshNI GGYRCC 1 cut(s) 35
BsiEI CGRYCG 1 cut(s) 811
BsiHKAI GWGCWC 2 cut(s) 114, 561
BsiSI CCGG 9 cut(s) 42, 166, 219, 379, 550, 792, 807, 811, 971
BsiWI CGTACG 1 cut(s) 565
BslFI GGGAC 1 cut(s) 906
BslI CCNNNNNNNGG 9 cut(s) 121, 183, 184, 225, 259, 477, 580, 688, 817
BsmAI GTCTC 3 cut(s) 293, 380, 726
BsmBI CGTCTC 2 cut(s) 293, 726
BsmFI GGGAC 1 cut(s) 906
BsnI GGCC 6 cut(s) 165, 791, 810, 970, 985, 1014
Bso31I GGTCTC 1 cut(s) 380
Bsp119I TTCGAA 1 cut(s) 79
Bsp1286I GDGCHC 4 cut(s) 114, 466, 561, 586
Bsp143I GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
Bsp19I CCATGG 1 cut(s) 649
BspANI GGCC 6 cut(s) 165, 791, 810, 970, 985, 1014
BspCNI CTCAG 1 cut(s) 808
BspFNI CGCG 1 cut(s) 441
BspLI GGNNCC 8 cut(s) 37, 46, 396, 534, 548, 894, 906, 1013
BspPI GGATC 7 cut(s) 137, 244, 278, 315, 390, 527, 540
BspT104I TTCGAA 1 cut(s) 79
BspT107I GGYRCC 1 cut(s) 35
BspTNI GGTCTC 1 cut(s) 380
BsrBI CCGCTC 1 cut(s) 241
BsrDI GCAATG 1 cut(s) 460
BsrFI RCCGGY 2 cut(s) 165, 810
BsrI ACTGG 2 cut(s) 536, 880
BssAI RCCGGY 2 cut(s) 165, 810
BssECI CCNNGG 9 cut(s) 329, 486, 511, 649, 682, 918, 919, 940, 1015
BssMI GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
BssT1I CCWWGG 5 cut(s) 329, 486, 511, 649, 940
Bst2UI CCWGG 2 cut(s) 920, 1016
BstBI TTCGAA 1 cut(s) 79
BstC8I GCNNGC 2 cut(s) 909, 983
BstDEI CTNAG 2 cut(s) 625, 816
BstDSI CCRYGG 2 cut(s) 649, 682
BstF5I GGATG 1 cut(s) 136
BstFNI CGCG 1 cut(s) 441
BstH2I RGCGCY 1 cut(s) 496
BstHHI GCGC 3 cut(s) 441, 453, 495
BstKTI GATC 7 cut(s) 72, 145, 252, 273, 310, 385, 535
BstMAI GTCTC 3 cut(s) 293, 380, 726
BstMBI GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
BstMCI CGRYCG 1 cut(s) 811
BstMWI GCNNNNNNNGC 4 cut(s) 44, 101, 614, 713
BstNI CCWGG 2 cut(s) 920, 1016
BstPAI GACNNNNGTC 2 cut(s) 567, 716
BstSCI CCNGG 6 cut(s) 378, 549, 805, 918, 970, 1014
BstSLI GKGCMC 3 cut(s) 114, 466, 561
BstUI CGCG 1 cut(s) 441
BstV1I GCAGC 5 cut(s) 620, 653, 810, 901, 990
BstX2I RGATCY 4 cut(s) 142, 270, 382, 532
BstYI RGATCY 4 cut(s) 142, 270, 382, 532
BstZI CGGCCG 1 cut(s) 808
BsuRI GGCC 6 cut(s) 165, 791, 810, 970, 985, 1014
BtgI CCRYGG 2 cut(s) 649, 682
BtgZI GCGATG 2 cut(s) 32, 626
BtrI CACGTC 1 cut(s) 313
BtsCI GGATG 1 cut(s) 136
BtsIMutI CAGTG 2 cut(s) 398, 543
Cac8I GCNNGC 2 cut(s) 909, 983
CaiI CAGNNNCTG 1 cut(s) 914
CfoI GCGC 3 cut(s) 441, 453, 495
Cfr10I RCCGGY 2 cut(s) 165, 810
Cfr13I GGNCC 5 cut(s) 326, 893, 968, 983, 1012
Csp6I GTAC 5 cut(s) 505, 566, 595, 637, 843
CspCI CAANNNNNGTGG 2 cut(s) 756, 791
CviAII CATG 3 cut(s) 349, 650, 721
CviQI GTAC 5 cut(s) 505, 566, 595, 637, 843
DdeI CTNAG 2 cut(s) 625, 816
DpnI GATC 7 cut(s) 71, 144, 251, 272, 309, 384, 534
DpnII GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
EaeI YGGCCR 3 cut(s) 163, 789, 808
EagI CGGCCG 1 cut(s) 808
EciI GGCGGA 2 cut(s) 110, 377
EclXI CGGCCG 1 cut(s) 808
Eco130I CCWWGG 5 cut(s) 329, 486, 511, 649, 940
Eco24I GRGCYC 1 cut(s) 586
Eco31I GGTCTC 1 cut(s) 380
Eco47I GGWCC 2 cut(s) 326, 893
Eco52I CGGCCG 1 cut(s) 808
Eco57I CTGAAG 1 cut(s) 1008
EcoO109I RGGNCCY 2 cut(s) 893, 1012
EcoRI GAATTC 1 cut(s) 403
EcoRII CCWGG 2 cut(s) 918, 1014
EcoT14I CCWWGG 5 cut(s) 329, 486, 511, 649, 940
EcoT38I GRGCYC 1 cut(s) 586
ErhI CCWWGG 5 cut(s) 329, 486, 511, 649, 940
Esp3I CGTCTC 2 cut(s) 293, 726
FaeI CATG 3 cut(s) 352, 653, 724
FaiI YATR 8 cut(s) 156, 160, 350, 369, 449, 580, 651, 722
FaqI GGGAC 1 cut(s) 906
FatI CATG 3 cut(s) 348, 649, 720
FauI CCCGC 4 cut(s) 52, 234, 925, 974
Fnu4HI GCNGC 9 cut(s) 93, 210, 609, 667, 670, 824, 912, 915, 979
FokI GGATG 1 cut(s) 143
FriOI GRGCYC 1 cut(s) 586
Fsp4HI GCNGC 9 cut(s) 93, 210, 609, 667, 670, 824, 912, 915, 979
FspBI CTAG 3 cut(s) 116, 867, 941
FspI TGCGCA 1 cut(s) 452
GlaI GCGC 3 cut(s) 440, 452, 494
GluI GCNGC 9 cut(s) 93, 210, 609, 667, 670, 824, 912, 915, 979
GsaI CCCAGC 2 cut(s) 692, 842
GsuI CTGGAG 1 cut(s) 738
HaeII RGCGCY 1 cut(s) 496
HaeIII GGCC 6 cut(s) 165, 791, 810, 970, 985, 1014
HapII CCGG 9 cut(s) 42, 166, 219, 379, 550, 792, 807, 811, 971
HhaI GCGC 3 cut(s) 441, 453, 495
Hin1II CATG 3 cut(s) 352, 653, 724
Hin6I GCGC 3 cut(s) 439, 451, 493
HinP1I GCGC 3 cut(s) 439, 451, 493
HinfI GANTC 3 cut(s) 11, 725, 800
HpaII CCGG 9 cut(s) 42, 166, 219, 379, 550, 792, 807, 811, 971
HphI GGTGA 2 cut(s) 439, 895
Hpy166II GTNNAC 3 cut(s) 112, 559, 622
Hpy188I TCNGA 2 cut(s) 387, 817
Hpy188III TCNNGA 1 cut(s) 729
Hpy8I GTNNAC 3 cut(s) 112, 559, 622
Hpy99I CGWCG 5 cut(s) 202, 566, 573, 591, 892
HpyAV CCTTC 5 cut(s) 25, 257, 298, 523, 983
HpyCH4IV ACGT 6 cut(s) 312, 564, 568, 589, 770, 831
HpyCH4V TGCA 5 cut(s) 112, 134, 523, 541, 559
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 101, 614, 713
HpyF3I CTNAG 2 cut(s) 625, 816
HpySE526I ACGT 6 cut(s) 312, 564, 568, 589, 770, 831
Hsp92II CATG 3 cut(s) 352, 653, 724
HspAI GCGC 3 cut(s) 439, 451, 493
Kzo9I GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
LmnI GCTCC 4 cut(s) 44, 292, 552, 904
Lsp1109I GCAGC 5 cut(s) 620, 653, 810, 901, 990
LweI GCATC 2 cut(s) 46, 121
MaeI CTAG 3 cut(s) 116, 867, 941
MaeII ACGT 6 cut(s) 312, 564, 568, 589, 770, 831
MaeIII GTNAC 2 cut(s) 698, 883
MalI GATC 7 cut(s) 71, 144, 251, 272, 309, 384, 534
MbiI CCGCTC 1 cut(s) 241
MboI GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
MflI RGATCY 4 cut(s) 142, 270, 382, 532
MhlI GDGCHC 4 cut(s) 114, 466, 561, 586
MluCI AATT 6 cut(s) 65, 81, 284, 343, 403, 795
MlyI GAGTC 2 cut(s) 734, 809
MseI TTAA 1 cut(s) 339
MspA1I CMGCKG 2 cut(s) 911, 981
MspI CCGG 9 cut(s) 42, 166, 219, 379, 550, 792, 807, 811, 971
MspR9I CCNGG 6 cut(s) 380, 551, 807, 920, 972, 1016
MvaI CCWGG 2 cut(s) 920, 1016
MvnI CGCG 1 cut(s) 441
MwoI GCNNNNNNNGC 4 cut(s) 44, 101, 614, 713
NciI CCSGG 4 cut(s) 380, 551, 807, 972
NcoI CCATGG 1 cut(s) 649
NdeII GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
NlaIII CATG 3 cut(s) 352, 653, 724
NlaIV GGNNCC 8 cut(s) 37, 46, 396, 534, 548, 894, 906, 1013
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 2 cut(s) 698, 883
NsbI TGCGCA 1 cut(s) 452
NspV TTCGAA 1 cut(s) 79
PasI CCCWGGG 1 cut(s) 919
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PfeI GAWTC 1 cut(s) 11
Pfl23II CGTACG 1 cut(s) 565
PflFI GACNNNGTC 1 cut(s) 877
PflMI CCANNNNNTGG 1 cut(s) 688
PfoI TCCNGGA 1 cut(s) 378
PkrI GCNGC 9 cut(s) 94, 211, 610, 668, 671, 825, 913, 916, 980
PleI GAGTC 2 cut(s) 733, 808
PpsI GAGTC 2 cut(s) 733, 808
PpuMI RGGWCCY 1 cut(s) 893
PshAI GACNNNNGTC 2 cut(s) 567, 716
Psp1406I AACGTT 1 cut(s) 770
Psp5II RGGWCCY 1 cut(s) 893
Psp6I CCWGG 2 cut(s) 918, 1014
PspFI CCCAGC 2 cut(s) 688, 838
PspGI CCWGG 2 cut(s) 918, 1014
PspLI CGTACG 1 cut(s) 565
PspN4I GGNNCC 8 cut(s) 37, 46, 396, 534, 548, 894, 906, 1013
PspPI GGNCC 5 cut(s) 326, 893, 968, 983, 1012
PspPPI RGGWCCY 1 cut(s) 893
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 4 cut(s) 142, 270, 382, 532
PsyI GACNNNGTC 1 cut(s) 877
RsaI GTAC 5 cut(s) 506, 567, 596, 638, 844
RsaNI GTAC 5 cut(s) 505, 566, 595, 637, 843
SaqAI TTAA 1 cut(s) 339
SatI GCNGC 9 cut(s) 93, 210, 609, 667, 670, 824, 912, 915, 979
Sau3AI GATC 7 cut(s) 69, 142, 249, 270, 307, 382, 532
Sau96I GGNCC 5 cut(s) 326, 893, 968, 983, 1012
ScaI AGTACT 1 cut(s) 596
SchI GAGTC 2 cut(s) 734, 809
ScrFI CCNGG 6 cut(s) 380, 551, 807, 920, 972, 1016
SduI GDGCHC 4 cut(s) 114, 466, 561, 586
SfaNI GCATC 2 cut(s) 46, 121
SfuI TTCGAA 1 cut(s) 79
SinI GGWCC 2 cut(s) 326, 893
Sse9I AATT 6 cut(s) 65, 81, 284, 343, 403, 795
SspMI CTAG 3 cut(s) 116, 867, 941
StyD4I CCNGG 6 cut(s) 378, 549, 805, 918, 970, 1014
StyI CCWWGG 5 cut(s) 329, 486, 511, 649, 940
TaiI ACGT 6 cut(s) 315, 567, 571, 592, 773, 834
TaqI TCGA 3 cut(s) 72, 79, 586
TasI AATT 6 cut(s) 65, 81, 284, 343, 403, 795
TatI WGTACW 1 cut(s) 594
TauI GCSGC 4 cut(s) 95, 212, 672, 914
TfiI GAWTC 1 cut(s) 11
Tru1I TTAA 1 cut(s) 339
Tru9I TTAA 1 cut(s) 339
TscAI CASTG 2 cut(s) 405, 543
TseFI GTSAC 2 cut(s) 698, 883
TseI GCWGC 5 cut(s) 608, 666, 823, 914, 978
Tsp45I GTSAC 2 cut(s) 698, 883
TspGWI ACGGA 4 cut(s) 186, 242, 860, 872
TspRI CASTG 2 cut(s) 405, 543
Tth111I GACNNNGTC 1 cut(s) 877
Van91I CCANNNNNTGG 1 cut(s) 688
VneI GTGCAC 2 cut(s) 110, 557
VpaK11BI GGWCC 2 cut(s) 326, 893
XapI RAATTY 1 cut(s) 403
XcmI CCANNNNNNNNNTGG 1 cut(s) 355
XmaJI CCTAGG 1 cut(s) 940
XspI CTAG 3 cut(s) 116, 867, 941
ZrmI AGTACT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.