Rmu_ssc0000391.1_g000030

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000391.1
OG0000123
Physical Location & Seq
Forward (+)
101539 .. 102653
1115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000391.1_g000030.1.cds

Sequence Viewer

Length: 960 bp
atgattcattcttataccttttgtggtcggtttttatccaagaagacagtggtgatcccgtcattctcggcggcgatctctaacgtttgggggttgaaggagagagttctgatccggcaggaggaggaggatatctttgtcttccaattcaaggatagtgaggtgaagaatcagattcccttaagcggtccatggttctacaacaactctatgttgctgctagcagactatgaccgcatttcagatctcggagcggctcagctacatttcctggaggtttgggtggcggtgaaggggttgtgcattgctatgcgcaacgagaaggccttaaccctaattagacgagcgttggattccttcgttcgggttgatcagggggcggtgcagcggaaggatccgattcagaggatccgtgtggtacaggacgttcggcggaggatttgggcgcgacgtgtcagaccgcgaggtggaagcaacccaagtgggttggcggcgtcggaagcggtggtttctgggttggttgctgggtcagagatgctggtgatggtgggactaggtgcgccagaggtttctagggtggcggaagtggctggaacactggtgctaggattgggttcgccagccacgaggagctctgtacgcgttcaggaaaattcggcggcaaaccctaattttgaattagggttgactggtgggttgactgggactgctcagtttggccttgggccggggctgcatgggactgggtcaaactactttgctgatggggctaatataaatggccttgttgttggggtaaattcagaaaaacatcttaccttgggtgtgaaaaagaagagttttcagcctaggttggctttcatacctccggaatttcaccttggtgagttggtggaggttccgatttctctagggacaattccaaagaaaaaaaggccgtcctgttggacgaaggaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

319

Amino Acids

34.78

Weight (kDa)

9.76

Isoelectric Point (pI)

32.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 314
AccBSI CCGCTC 1 cut(s) 254
AccII CGCG 3 cut(s) 448, 463, 642
AccIII TCCGGA 1 cut(s) 868
AclI AACGTT 1 cut(s) 84
AclWI GGATC 6 cut(s) 49, 106, 389, 402, 403, 416
AcsI RAATTY 3 cut(s) 652, 799, 872
AcyI GRCGYC 1 cut(s) 494
AfaI GTAC 2 cut(s) 420, 639
AfiI CCNNNNNNNGG 6 cut(s) 121, 151, 185, 363, 467, 727
AflII CTTAAG 1 cut(s) 181
AflIII ACRYGT 2 cut(s) 451, 640
AgsI TTSAA 3 cut(s) 97, 151, 677
AjiI CACGTC 1 cut(s) 452
AjnI CCWGG 1 cut(s) 270
AjuI GAANNNNNNNTTGG 2 cut(s) 864, 896
AleI CACNNNNGTG 1 cut(s) 882
AluBI AGCT 2 cut(s) 262, 633
AluI AGCT 2 cut(s) 262, 633
Alw21I GWGCWC 1 cut(s) 635
AlwI GGATC 6 cut(s) 49, 106, 389, 402, 403, 416
Aor13HI TCCGGA 1 cut(s) 868
AoxI GGCC 5 cut(s) 324, 718, 725, 781, 935
ApeKI GCWGC 3 cut(s) 217, 385, 733
ApoI RAATTY 3 cut(s) 652, 799, 872
AspA2I CCTAGG 1 cut(s) 848
AspLEI GCGC 3 cut(s) 315, 448, 562
AspS9I GGNCC 2 cut(s) 188, 725
AsuC2I CCSGG 1 cut(s) 729
AsuHPI GGTGA 6 cut(s) 64, 175, 301, 553, 869, 896
AsuNHI GCTAGC 1 cut(s) 220
AvaII GGWCC 1 cut(s) 188
AvrII CCTAGG 1 cut(s) 848
BamHI GGATCC 2 cut(s) 394, 408
BanII GRGCYC 1 cut(s) 635
BauI CACGAG 1 cut(s) 625
BbsI GAAGAC 2 cut(s) 50, 133
Bbv12I GWGCWC 1 cut(s) 635
BbvI GCAGC 3 cut(s) 204, 397, 720
BccI CCATC 2 cut(s) 538, 758
BceAI ACGGC 1 cut(s) 922
BciT130I CCWGG 1 cut(s) 272
BclI TGATCA 1 cut(s) 370
BcnI CCSGG 1 cut(s) 729
BfaI CTAG 6 cut(s) 221, 554, 573, 605, 849, 911
BfrI CTTAAG 1 cut(s) 181
BglII AGATCT 1 cut(s) 244
BisI GCNGC 7 cut(s) 72, 218, 255, 386, 492, 660, 734
BlnI CCTAGG 1 cut(s) 848
BlpI GCTNAGC 1 cut(s) 258
BlsI GCNGC 7 cut(s) 73, 219, 256, 387, 493, 661, 735
Bme1390I CCNGG 2 cut(s) 272, 729
Bme18I GGWCC 1 cut(s) 188
BmgBI CACGTC 1 cut(s) 452
BmgT120I GGNCC 2 cut(s) 188, 725
BmiI GGNNCC 3 cut(s) 396, 410, 900
BmrFI CCNGG 2 cut(s) 272, 729
BmrI ACTGGG 2 cut(s) 711, 753
BmsI GCATC 1 cut(s) 525
BmtI GCTAGC 1 cut(s) 224
BmuI ACTGGG 2 cut(s) 711, 753
BpiI GAAGAC 2 cut(s) 50, 133
BpmI CTGGAG 1 cut(s) 293
Bpu1102I GCTNAGC 1 cut(s) 258
BpuMI CCSGG 1 cut(s) 729
BsaHI GRCGYC 1 cut(s) 494
BsaJI CCNNGG 6 cut(s) 191, 721, 728, 819, 848, 880
BsaWI WCCGGW 1 cut(s) 868
Bsc4I CCNNNNNNNGG 6 cut(s) 121, 151, 185, 363, 467, 727
Bse1I ACTGG 4 cut(s) 603, 694, 706, 748
Bse3DI GCAATG 1 cut(s) 303
BseAI TCCGGA 1 cut(s) 868
BseBI CCWGG 1 cut(s) 272
BseDI CCNNGG 6 cut(s) 191, 721, 728, 819, 848, 880
BseLI CCNNNNNNNGG 6 cut(s) 121, 151, 185, 363, 467, 727
BseMI GCAATG 1 cut(s) 303
BseMII CTCAG 2 cut(s) 272, 725
BseNI ACTGG 4 cut(s) 603, 694, 706, 748
BseRI GAGGAG 3 cut(s) 137, 140, 643
BseXI GCAGC 3 cut(s) 204, 397, 720
BseYI CCCAGC 1 cut(s) 524
BsgI GTGCAG 1 cut(s) 404
Bsh1236I CGCG 3 cut(s) 448, 463, 642
BshFI GGCC 5 cut(s) 326, 720, 727, 783, 937
BsiHKAI GWGCWC 1 cut(s) 635
BsiSI CCGG 3 cut(s) 115, 728, 869
BslFI GGGAC 4 cut(s) 564, 718, 754, 928
BslI CCNNNNNNNGG 6 cut(s) 121, 151, 185, 363, 467, 727
BsmFI GGGAC 4 cut(s) 564, 718, 754, 928
BsnI GGCC 5 cut(s) 326, 720, 727, 783, 937
Bsp1286I GDGCHC 1 cut(s) 635
Bsp13I TCCGGA 1 cut(s) 868
Bsp143I GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
Bsp1720I GCTNAGC 1 cut(s) 258
Bsp19I CCATGG 1 cut(s) 191
BspANI GGCC 5 cut(s) 326, 720, 727, 783, 937
BspCNI CTCAG 2 cut(s) 271, 724
BspEI TCCGGA 1 cut(s) 868
BspFNI CGCG 3 cut(s) 448, 463, 642
BspLI GGNNCC 3 cut(s) 396, 410, 900
BspOI GCTAGC 1 cut(s) 224
BspPI GGATC 6 cut(s) 49, 106, 389, 402, 403, 416
BspTI CTTAAG 1 cut(s) 181
BsrBI CCGCTC 1 cut(s) 254
BsrDI GCAATG 1 cut(s) 303
BsrI ACTGG 4 cut(s) 603, 694, 706, 748
BssECI CCNNGG 6 cut(s) 191, 721, 728, 819, 848, 880
BssMI GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
BssNI GRCGYC 1 cut(s) 494
BssSI CACGAG 1 cut(s) 625
BssT1I CCWWGG 5 cut(s) 191, 721, 819, 848, 880
Bst2BI CACGAG 1 cut(s) 625
Bst2UI CCWGG 1 cut(s) 272
Bst4CI ACNGT 1 cut(s) 49
Bst6I CTCTTC 1 cut(s) 830
BstACI GRCGYC 1 cut(s) 494
BstAFI CTTAAG 1 cut(s) 181
BstC8I GCNNGC 2 cut(s) 222, 621
BstDEI CTNAG 2 cut(s) 258, 711
BstDSI CCRYGG 1 cut(s) 191
BstFNI CGCG 3 cut(s) 448, 463, 642
BstHHI GCGC 3 cut(s) 315, 448, 562
BstKTI GATC 7 cut(s) 57, 78, 114, 247, 373, 397, 411
BstMBI GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
BstMWI GCNNNNNNNGC 5 cut(s) 500, 587, 639, 733, 767
BstNI CCWGG 1 cut(s) 272
BstSCI CCNGG 2 cut(s) 270, 727
BstUI CGCG 3 cut(s) 448, 463, 642
BstV1I GCAGC 3 cut(s) 204, 397, 720
BstV2I GAAGAC 2 cut(s) 50, 133
BstX2I RGATCY 3 cut(s) 244, 394, 408
BstYI RGATCY 3 cut(s) 244, 394, 408
BsuRI GGCC 5 cut(s) 326, 720, 727, 783, 937
BtgI CCRYGG 1 cut(s) 191
BtrI CACGTC 1 cut(s) 452
BtsIMutI CAGTG 2 cut(s) 54, 596
Cac8I GCNNGC 2 cut(s) 222, 621
CfoI GCGC 3 cut(s) 315, 448, 562
Cfr13I GGNCC 2 cut(s) 188, 725
CseI GACGC 1 cut(s) 483
Csp6I GTAC 2 cut(s) 419, 638
CspCI CAANNNNNGTGG 2 cut(s) 463, 498
CviAII CATG 2 cut(s) 192, 737
CviQI GTAC 2 cut(s) 419, 638
DdeI CTNAG 2 cut(s) 258, 711
DpnI GATC 7 cut(s) 56, 77, 113, 246, 372, 396, 410
DpnII GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
Eam1104I CTCTTC 1 cut(s) 830
EarI CTCTTC 1 cut(s) 830
EciI GGCGGA 2 cut(s) 448, 596
Ecl136II GAGCTC 1 cut(s) 633
Eco130I CCWWGG 5 cut(s) 191, 721, 819, 848, 880
Eco147I AGGCCT 1 cut(s) 326
Eco24I GRGCYC 1 cut(s) 635
Eco32I GATATC 1 cut(s) 133
Eco47I GGWCC 1 cut(s) 188
Eco53kI GAGCTC 1 cut(s) 633
EcoICRI GAGCTC 1 cut(s) 633
EcoRII CCWGG 1 cut(s) 270
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 5 cut(s) 191, 721, 819, 848, 880
EcoT38I GRGCYC 1 cut(s) 635
ErhI CCWWGG 5 cut(s) 191, 721, 819, 848, 880
FaeI CATG 2 cut(s) 195, 740
FaiI YATR 8 cut(s) 15, 193, 212, 231, 311, 738, 776, 863
FaqI GGGAC 4 cut(s) 564, 718, 754, 928
FatI CATG 2 cut(s) 191, 736
FbaI TGATCA 1 cut(s) 370
Fnu4HI GCNGC 7 cut(s) 72, 218, 255, 386, 492, 660, 734
FriOI GRGCYC 1 cut(s) 635
Fsp4HI GCNGC 7 cut(s) 72, 218, 255, 386, 492, 660, 734
FspBI CTAG 6 cut(s) 221, 554, 573, 605, 849, 911
FspI TGCGCA 1 cut(s) 314
GlaI GCGC 3 cut(s) 314, 447, 561
GluI GCNGC 7 cut(s) 72, 218, 255, 386, 492, 660, 734
GsaI CCCAGC 1 cut(s) 528
GsuI CTGGAG 1 cut(s) 293
HaeIII GGCC 5 cut(s) 326, 720, 727, 783, 937
HapII CCGG 3 cut(s) 115, 728, 869
HgaI GACGC 1 cut(s) 483
HhaI GCGC 3 cut(s) 315, 448, 562
Hin1I GRCGYC 1 cut(s) 494
Hin1II CATG 2 cut(s) 195, 740
Hin6I GCGC 3 cut(s) 313, 446, 560
HinP1I GCGC 3 cut(s) 313, 446, 560
HincII GTYRAC 2 cut(s) 687, 699
HindII GTYRAC 2 cut(s) 687, 699
HinfI GANTC 5 cut(s) 4, 169, 175, 353, 400
HpaII CCGG 3 cut(s) 115, 728, 869
HphI GGTGA 6 cut(s) 64, 175, 301, 553, 869, 896
Hpy166II GTNNAC 2 cut(s) 687, 699
Hpy188III TCNNGA 2 cut(s) 647, 869
Hpy8I GTNNAC 2 cut(s) 687, 699
Hpy99I CGWCG 2 cut(s) 453, 499
HpyAV CCTTC 6 cut(s) 91, 286, 316, 367, 385, 946
HpyCH4III ACNGT 1 cut(s) 49
HpyCH4IV ACGT 3 cut(s) 84, 426, 451
HpyCH4V TGCA 3 cut(s) 303, 385, 736
HpyF10VI GCNNNNNNNGC 5 cut(s) 500, 587, 639, 733, 767
HpyF3I CTNAG 2 cut(s) 258, 711
HpySE526I ACGT 3 cut(s) 84, 426, 451
Hsp92I GRCGYC 1 cut(s) 494
Hsp92II CATG 2 cut(s) 195, 740
HspAI GCGC 3 cut(s) 313, 446, 560
Kpn2I TCCGGA 1 cut(s) 868
Ksp22I TGATCA 1 cut(s) 370
Kzo9I GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
LmnI GCTCC 2 cut(s) 251, 630
Lsp1109I GCAGC 3 cut(s) 204, 397, 720
LweI GCATC 1 cut(s) 525
MaeI CTAG 6 cut(s) 221, 554, 573, 605, 849, 911
MaeII ACGT 3 cut(s) 84, 426, 451
MalI GATC 7 cut(s) 56, 77, 113, 246, 372, 396, 410
MbiI CCGCTC 1 cut(s) 254
MboI GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
MboII GAAGA 4 cut(s) 55, 133, 178, 847
MflI RGATCY 3 cut(s) 244, 394, 408
MhlI GDGCHC 1 cut(s) 635
MluCI AATT 8 cut(s) 146, 336, 652, 670, 677, 799, 872, 918
MluI ACGCGT 1 cut(s) 640
MmeI TCCRAC 3 cut(s) 330, 477, 926
MroI TCCGGA 1 cut(s) 868
MseI TTAA 2 cut(s) 182, 329
MslI CAYNNNNRTG 2 cut(s) 308, 882
MspA1I CMGCKG 1 cut(s) 388
MspCI CTTAAG 1 cut(s) 181
MspI CCGG 3 cut(s) 115, 728, 869
MspR9I CCNGG 2 cut(s) 272, 729
MvaI CCWGG 1 cut(s) 272
MvnI CGCG 3 cut(s) 448, 463, 642
MwoI GCNNNNNNNGC 5 cut(s) 500, 587, 639, 733, 767
NciI CCSGG 1 cut(s) 729
NcoI CCATGG 1 cut(s) 191
NdeII GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
NheI GCTAGC 1 cut(s) 220
NlaIII CATG 2 cut(s) 195, 740
NlaIV GGNNCC 3 cut(s) 396, 410, 900
NmeAIII GCCGAG 1 cut(s) 47
NsbI TGCGCA 1 cut(s) 314
OliI CACNNNNGTG 1 cut(s) 882
PceI AGGCCT 1 cut(s) 326
PcsI WCGNNNNNNNCGW 1 cut(s) 623
PfeI GAWTC 5 cut(s) 4, 169, 175, 353, 400
PflFI GACNNNGTC 1 cut(s) 745
PfoI TCCNGGA 1 cut(s) 270
PkrI GCNGC 7 cut(s) 73, 219, 256, 387, 493, 661, 735
Psp124BI GAGCTC 1 cut(s) 635
Psp1406I AACGTT 1 cut(s) 84
Psp6I CCWGG 1 cut(s) 270
PspFI CCCAGC 1 cut(s) 524
PspGI CCWGG 1 cut(s) 270
PspN4I GGNNCC 3 cut(s) 396, 410, 900
PspPI GGNCC 2 cut(s) 188, 725
PsrI GAACNNNNNNTAC 2 cut(s) 411, 443
PsuI RGATCY 3 cut(s) 244, 394, 408
PsyI GACNNNGTC 1 cut(s) 745
RsaI GTAC 2 cut(s) 420, 639
RsaNI GTAC 2 cut(s) 419, 638
RseI CAYNNNNRTG 2 cut(s) 308, 882
SacI GAGCTC 1 cut(s) 635
SaqAI TTAA 2 cut(s) 182, 329
SatI GCNGC 7 cut(s) 72, 218, 255, 386, 492, 660, 734
Sau3AI GATC 7 cut(s) 54, 75, 111, 244, 370, 394, 408
Sau96I GGNCC 2 cut(s) 188, 725
ScrFI CCNGG 2 cut(s) 272, 729
SduI GDGCHC 1 cut(s) 635
SfaNI GCATC 1 cut(s) 525
SinI GGWCC 1 cut(s) 188
SmiMI CAYNNNNRTG 2 cut(s) 308, 882
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
Sse9I AATT 8 cut(s) 146, 336, 652, 670, 677, 799, 872, 918
SseBI AGGCCT 1 cut(s) 326
SspMI CTAG 6 cut(s) 221, 554, 573, 605, 849, 911
SstI GAGCTC 1 cut(s) 635
StuI AGGCCT 1 cut(s) 326
StyD4I CCNGG 2 cut(s) 270, 727
StyI CCWWGG 5 cut(s) 191, 721, 819, 848, 880
TaaI ACNGT 1 cut(s) 49
TaiI ACGT 3 cut(s) 87, 429, 454
TasI AATT 8 cut(s) 146, 336, 652, 670, 677, 799, 872, 918
TauI GCSGC 4 cut(s) 74, 257, 494, 662
TfiI GAWTC 5 cut(s) 4, 169, 175, 353, 400
Tru1I TTAA 2 cut(s) 182, 329
Tru9I TTAA 2 cut(s) 182, 329
TscAI CASTG 2 cut(s) 54, 603
TseI GCWGC 3 cut(s) 217, 385, 733
TspDTI ATGAA 1 cut(s) 850
TspGWI ACGGA 1 cut(s) 401
TspRI CASTG 2 cut(s) 54, 603
Tth111I GACNNNGTC 1 cut(s) 745
Vha464I CTTAAG 1 cut(s) 181
VpaK11BI GGWCC 1 cut(s) 188
XapI RAATTY 3 cut(s) 652, 799, 872
XcmI CCANNNNNNNNNTGG 1 cut(s) 46
XmaJI CCTAGG 1 cut(s) 848
XspI CTAG 6 cut(s) 221, 554, 573, 605, 849, 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.