FvH4_2g16250

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000123
Physical Location & Seq
Reverse (-)
14195917 .. 14197751
1835 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g16250.t1

Sequence Viewer

Length: 987 bp
ATGACGGCGCTTCCTATGAGATCGGAGGAGGCGGCGGTGACTTTTGAAGGGGGAATGGATCTCATCCGAGATTCAGGCTTCTATTTGTGTGGCCGGCTCTTGTCTGATCAGGCGGTGTCAGCATTGGCTATGTGGACGGCCATGACAGAGGAGAAGGAACATGCCCTCCACGGCGGACCTTGGTTCTACAACAACTCCATACTTCTCTTGGCTGACTACAATGGAGTTGGTGATTTGCAGAGATGCTCTTTGAATATGTTGGAAGTATGGATCTCAATGCGAGGTCTTCGAGTTGCCATGCGTAACGAGAAGGTATTATCTCTGGTTGAAAACGTGTTGGGTTCGTATATACGAGCAGAGCCTTCAGCGTTGCAGATTCCGATTCAAAAGATTCGGATTGTTCATGGTGTACGAATCGAGGTAATTCTTAGAGTGGCAGACTCTCTCCTTCTCATCGGAGGTGTCGGTGATGCTCCATCTGAAGCTAGAGAAGGGCCGAGGGCTATGTCGCTGGATGTGGCTTTGGAGATTGATCCCGTGGTGGTGGTGGTGGTGGAAGCACAAACGCCCATCTCGACGGAGACCTCCATATGGCTATTCCAGCAGCAACCTTGCTTTGGTTGTCGTTTGGGCATCACTGACGCCTGGCTTCGCTATCGGATTGGAGTTCTCTATGCCTTTTTAGTCTGTTGTAGGACCTTGGCGGAAAGACAGACGAAAGATTCAAATCTGTTGGTGTGTGCTGGTGTGGGAGTGGTTGTTGTTGTTTCTGTTGTTCAGATCTACGTACGGCGACCGGGTCATCAGATGATCAGGTATGCGGCATGTCTCGGCTATGGGTGGCGGCCTTGTGGCGCTTTGTCGAGCATGGTCGACTTCGACGTGGGCGTGCCGGAGGCTTTTGTCATGCCTCATGGAGGTTTGGCGTGGCTGTTGACTTGCCGGTTGATCAGCGACGCACGCCATAAGTTGGAGATGATGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

329

Amino Acids

36.23

Weight (kDa)

5.76

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 970
AccI GTMKAC 1 cut(s) 873
AciI CCGC 7 cut(s) 32, 35, 113, 174, 704, 821, 844
AclWI GGATC 3 cut(s) 66, 278, 527
AcoI YGGCCR 2 cut(s) 91, 138
AcuI CTGAAG 2 cut(s) 348, 501
AcyI GRCGYC 1 cut(s) 642
AfaI GTAC 2 cut(s) 411, 789
AfiI CCNNNNNNNGG 4 cut(s) 591, 617, 917, 970
AflIII ACRYGT 1 cut(s) 333
AgsI TTSAA 5 cut(s) 47, 253, 329, 386, 726
AjiI CACGTC 1 cut(s) 883
AjnI CCWGG 1 cut(s) 644
AloI GAACNNNNNNTCC 2 cut(s) 150, 182
AluBI AGCT 1 cut(s) 485
AluI AGCT 1 cut(s) 485
Alw26I GTCTC 2 cut(s) 575, 833
AlwI GGATC 3 cut(s) 66, 278, 527
AoxI GGCC 4 cut(s) 91, 138, 494, 845
ApeKI GCWGC 1 cut(s) 604
AspLEI GCGC 2 cut(s) 10, 857
AspS9I GGNCC 3 cut(s) 176, 494, 696
AsuC2I CCSGG 1 cut(s) 798
AsuHPI GGTGA 3 cut(s) 49, 242, 479
AvaII GGWCC 2 cut(s) 176, 696
BbsI GAAGAC 1 cut(s) 278
BbvI GCAGC 1 cut(s) 616
BccI CCATC 3 cut(s) 484, 578, 973
BceAI ACGGC 4 cut(s) 21, 153, 187, 806
BciT130I CCWGG 1 cut(s) 646
BclI TGATCA 3 cut(s) 106, 810, 948
BcnI CCSGG 1 cut(s) 798
BcoDI GTCTC 2 cut(s) 575, 833
BfaI CTAG 1 cut(s) 486
BfoI RGCGCY 2 cut(s) 11, 858
BglII AGATCT 1 cut(s) 780
BisI GCNGC 4 cut(s) 33, 605, 822, 845
BlsI GCNGC 4 cut(s) 34, 606, 823, 846
Bme1390I CCNGG 2 cut(s) 646, 798
Bme18I GGWCC 2 cut(s) 176, 696
BmgBI CACGTC 1 cut(s) 883
BmgT120I GGNCC 3 cut(s) 176, 494, 696
BmrFI CCNGG 2 cut(s) 646, 798
BmsI GCATC 3 cut(s) 233, 460, 642
BpiI GAAGAC 1 cut(s) 278
BpuMI CCSGG 1 cut(s) 798
BsaAI YACGTR 1 cut(s) 787
BsaBI GATNNNNATC 1 cut(s) 726
BsaHI GRCGYC 1 cut(s) 642
BsaI GGTCTC 1 cut(s) 575
BsaJI CCNNGG 5 cut(s) 169, 179, 497, 537, 699
BsaXI ACNNNNNCTCC 6 cut(s) 150, 179, 180, 209, 744, 774
Bsc4I CCNNNNNNNGG 4 cut(s) 591, 617, 917, 970
Bse118I RCCGGY 2 cut(s) 93, 942
Bse8I GATNNNNATC 1 cut(s) 726
BseBI CCWGG 1 cut(s) 646
BseDI CCNNGG 5 cut(s) 169, 179, 497, 537, 699
BseGI GGATG 2 cut(s) 63, 520
BseJI GATNNNNATC 1 cut(s) 726
BseLI CCNNNNNNNGG 4 cut(s) 591, 617, 917, 970
BseRI GAGGAG 2 cut(s) 41, 164
BseXI GCAGC 1 cut(s) 616
Bsh1285I CGRYCG 1 cut(s) 797
BshFI GGCC 4 cut(s) 93, 140, 496, 847
BsiEI CGRYCG 1 cut(s) 797
BsiSI CCGG 4 cut(s) 94, 797, 893, 943
BsiWI CGTACG 1 cut(s) 787
BslI CCNNNNNNNGG 4 cut(s) 591, 617, 917, 970
BsmAI GTCTC 2 cut(s) 575, 833
BsnI GGCC 4 cut(s) 93, 140, 496, 847
Bso31I GGTCTC 1 cut(s) 575
Bsp143I GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
BspACI CCGC 7 cut(s) 32, 35, 113, 174, 704, 821, 844
BspANI GGCC 4 cut(s) 93, 140, 496, 847
BspPI GGATC 3 cut(s) 66, 278, 527
BspTNI GGTCTC 1 cut(s) 575
BsrFI RCCGGY 2 cut(s) 93, 942
BssAI RCCGGY 2 cut(s) 93, 942
BssECI CCNNGG 5 cut(s) 169, 179, 497, 537, 699
BssMI GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
BssNI GRCGYC 1 cut(s) 642
BssT1I CCWWGG 2 cut(s) 179, 699
Bst2UI CCWGG 1 cut(s) 646
BstACI GRCGYC 1 cut(s) 642
BstBAI YACGTR 1 cut(s) 787
BstC8I GCNNGC 3 cut(s) 95, 890, 961
BstDEI CTNAG 1 cut(s) 428
BstDSI CCRYGG 2 cut(s) 169, 537
BstENI CCTNNNNNAGG 1 cut(s) 915
BstF5I GGATG 2 cut(s) 63, 520
BstH2I RGCGCY 2 cut(s) 11, 858
BstHHI GCGC 2 cut(s) 10, 857
BstKTI GATC 8 cut(s) 23, 61, 109, 273, 535, 783, 813, 951
BstMAI GTCTC 2 cut(s) 575, 833
BstMBI GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
BstMCI CGRYCG 1 cut(s) 797
BstMWI GCNNNNNNNGC 3 cut(s) 119, 601, 960
BstNI CCWGG 1 cut(s) 646
BstNSI RCATGY 2 cut(s) 164, 828
BstSCI CCNGG 2 cut(s) 644, 796
BstSNI TACGTA 1 cut(s) 787
BstV1I GCAGC 1 cut(s) 616
BstV2I GAAGAC 1 cut(s) 278
BstX2I RGATCY 3 cut(s) 58, 270, 780
BstYI RGATCY 3 cut(s) 58, 270, 780
BsuRI GGCC 4 cut(s) 93, 140, 496, 847
BtgI CCRYGG 2 cut(s) 169, 537
BtrI CACGTC 1 cut(s) 883
BtsCI GGATG 2 cut(s) 63, 520
BtsIMutI CAGTG 1 cut(s) 636
Cac8I GCNNGC 3 cut(s) 95, 890, 961
CfoI GCGC 2 cut(s) 10, 857
Cfr10I RCCGGY 2 cut(s) 93, 942
Cfr13I GGNCC 3 cut(s) 176, 494, 696
CseI GACGC 2 cut(s) 650, 965
Csp6I GTAC 2 cut(s) 410, 788
CviAII CATG 8 cut(s) 142, 161, 298, 404, 825, 868, 907, 914
CviQI GTAC 2 cut(s) 410, 788
DdeI CTNAG 1 cut(s) 428
DpnI GATC 8 cut(s) 22, 60, 108, 272, 534, 782, 812, 950
DpnII GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
EaeI YGGCCR 2 cut(s) 91, 138
EciI GGCGGA 2 cut(s) 189, 719
Eco105I TACGTA 1 cut(s) 787
Eco130I CCWWGG 2 cut(s) 179, 699
Eco31I GGTCTC 1 cut(s) 575
Eco47I GGWCC 2 cut(s) 176, 696
Eco57I CTGAAG 2 cut(s) 348, 501
EcoNI CCTNNNNNAGG 1 cut(s) 915
EcoO109I RGGNCCY 1 cut(s) 696
EcoRII CCWGG 1 cut(s) 644
EcoT14I CCWWGG 2 cut(s) 179, 699
ErhI CCWWGG 2 cut(s) 179, 699
FaeI CATG 8 cut(s) 145, 164, 301, 407, 828, 871, 910, 917
FatI CATG 8 cut(s) 141, 160, 297, 403, 824, 867, 906, 913
FauNDI CATATG 1 cut(s) 590
FbaI TGATCA 3 cut(s) 106, 810, 948
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 4 cut(s) 33, 605, 822, 845
FokI GGATG 2 cut(s) 50, 527
Fsp4HI GCNGC 4 cut(s) 33, 605, 822, 845
FspBI CTAG 1 cut(s) 486
GlaI GCGC 2 cut(s) 9, 856
GluI GCNGC 4 cut(s) 33, 605, 822, 845
HaeII RGCGCY 2 cut(s) 11, 858
HaeIII GGCC 4 cut(s) 93, 140, 496, 847
HapII CCGG 4 cut(s) 94, 797, 893, 943
HgaI GACGC 2 cut(s) 650, 965
HhaI GCGC 2 cut(s) 10, 857
Hin1I GRCGYC 1 cut(s) 642
Hin1II CATG 8 cut(s) 145, 164, 301, 407, 828, 871, 910, 917
Hin6I GCGC 2 cut(s) 8, 855
HinP1I GCGC 2 cut(s) 8, 855
HincII GTYRAC 2 cut(s) 874, 936
HindII GTYRAC 2 cut(s) 874, 936
HinfI GANTC 7 cut(s) 71, 376, 382, 391, 414, 440, 722
HpaII CCGG 4 cut(s) 94, 797, 893, 943
HphI GGTGA 3 cut(s) 49, 242, 479
Hpy166II GTNNAC 4 cut(s) 135, 410, 874, 936
Hpy188III TCNNGA 1 cut(s) 574
Hpy8I GTNNAC 4 cut(s) 135, 410, 874, 936
Hpy99I CGWCG 3 cut(s) 580, 884, 959
HpyAV CCTTC 6 cut(s) 41, 148, 304, 372, 458, 485
HpyCH4IV ACGT 3 cut(s) 333, 786, 882
HpyCH4V TGCA 2 cut(s) 238, 373
HpyF10VI GCNNNNNNNGC 3 cut(s) 119, 601, 960
HpyF3I CTNAG 1 cut(s) 428
HpySE526I ACGT 3 cut(s) 333, 786, 882
Hsp92I GRCGYC 1 cut(s) 642
Hsp92II CATG 8 cut(s) 145, 164, 301, 407, 828, 871, 910, 917
HspAI GCGC 2 cut(s) 8, 855
KroI GCCGGC 1 cut(s) 93
KroNI GCCGGC 1 cut(s) 95
Ksp22I TGATCA 3 cut(s) 106, 810, 948
Kzo9I GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
LmnI GCTCC 1 cut(s) 478
Lsp1109I GCAGC 1 cut(s) 616
LweI GCATC 3 cut(s) 233, 460, 642
MaeI CTAG 1 cut(s) 486
MaeII ACGT 3 cut(s) 333, 786, 882
MaeIII GTNAC 2 cut(s) 37, 302
MalI GATC 8 cut(s) 22, 60, 108, 272, 534, 782, 812, 950
MboI GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
MboII GAAGA 1 cut(s) 278
MflI RGATCY 3 cut(s) 58, 270, 780
MluCI AATT 1 cut(s) 423
MlyI GAGTC 1 cut(s) 434
MmeI TCCRAC 2 cut(s) 240, 951
MroNI GCCGGC 1 cut(s) 93
MspI CCGG 4 cut(s) 94, 797, 893, 943
MspR9I CCNGG 2 cut(s) 646, 798
MvaI CCWGG 1 cut(s) 646
MwoI GCNNNNNNNGC 3 cut(s) 119, 601, 960
NaeI GCCGGC 1 cut(s) 95
NciI CCSGG 1 cut(s) 798
NdeI CATATG 1 cut(s) 590
NdeII GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
NgoMIV GCCGGC 1 cut(s) 93
NlaIII CATG 8 cut(s) 145, 164, 301, 407, 828, 871, 910, 917
NmeAIII GCCGAG 2 cut(s) 522, 810
NmuCI GTSAC 1 cut(s) 37
NspI RCATGY 2 cut(s) 164, 828
PcsI WCGNNNNNNNCGW 3 cut(s) 572, 879, 885
PdiI GCCGGC 1 cut(s) 95
PfeI GAWTC 6 cut(s) 71, 376, 382, 391, 414, 722
Pfl23II CGTACG 1 cut(s) 787
PflFI GACNNNGTC 1 cut(s) 798
PflMI CCANNNNNTGG 1 cut(s) 970
PkrI GCNGC 4 cut(s) 34, 606, 823, 846
PleI GAGTC 1 cut(s) 434
PpsI GAGTC 1 cut(s) 434
Ppu21I YACGTR 1 cut(s) 787
PpuMI RGGWCCY 1 cut(s) 696
Psp5II RGGWCCY 1 cut(s) 696
Psp6I CCWGG 1 cut(s) 644
PspGI CCWGG 1 cut(s) 644
PspLI CGTACG 1 cut(s) 787
PspPI GGNCC 3 cut(s) 176, 494, 696
PspPPI RGGWCCY 1 cut(s) 696
PsuI RGATCY 3 cut(s) 58, 270, 780
PsyI GACNNNGTC 1 cut(s) 798
RsaI GTAC 2 cut(s) 411, 789
RsaNI GTAC 2 cut(s) 410, 788
SalI GTCGAC 1 cut(s) 872
SatI GCNGC 4 cut(s) 33, 605, 822, 845
Sau3AI GATC 8 cut(s) 20, 58, 106, 270, 532, 780, 810, 948
Sau96I GGNCC 3 cut(s) 176, 494, 696
SchI GAGTC 1 cut(s) 434
ScrFI CCNGG 2 cut(s) 646, 798
SfaNI GCATC 3 cut(s) 233, 460, 642
SinI GGWCC 2 cut(s) 176, 696
SnaBI TACGTA 1 cut(s) 787
Sse9I AATT 1 cut(s) 423
SsiI CCGC 7 cut(s) 32, 35, 113, 174, 704, 821, 844
SspMI CTAG 1 cut(s) 486
StyD4I CCNGG 2 cut(s) 644, 796
StyI CCWWGG 2 cut(s) 179, 699
TaiI ACGT 3 cut(s) 336, 789, 885
TaqI TCGA 6 cut(s) 289, 417, 575, 863, 873, 879
TasI AATT 1 cut(s) 423
TauI GCSGC 3 cut(s) 35, 824, 847
TfiI GAWTC 6 cut(s) 71, 376, 382, 391, 414, 722
TscAI CASTG 1 cut(s) 643
TseFI GTSAC 1 cut(s) 37
TseI GCWGC 1 cut(s) 604
Tsp45I GTSAC 1 cut(s) 37
TspDTI ATGAA 1 cut(s) 392
TspGWI ACGGA 1 cut(s) 593
TspRI CASTG 1 cut(s) 643
Tth111I GACNNNGTC 1 cut(s) 798
Van91I CCANNNNNTGG 1 cut(s) 970
VpaK11BI GGWCC 2 cut(s) 176, 696
XagI CCTNNNNNAGG 1 cut(s) 915
XceI RCATGY 2 cut(s) 164, 828
XcmI CCANNNNNNNNNTGG 1 cut(s) 205
XmiI GTMKAC 1 cut(s) 873
XspI CTAG 1 cut(s) 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.