Rmu_sc0000894.1_g000054

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000894.1
OG0000123
Physical Location & Seq
Reverse (-)
249925 .. 251001
1077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000894.1_g000054.1.cds

Sequence Viewer

Length: 1077 bp
atggcggtgccgtcgtctaggccgtcgttgctggaaggagcggaagaggccgtgagcctgcttgggggcagcgaagcaatccaggaccccttcttttacctgtgtggccgctttctctctccgaagaaacccattgtgatcccgtcgctcacggcggcagtctctcggatatgggggcttaaggagcggatcttgatccgggaggaggaagatggagtttttgttttccagttcaaggacaaggagattaagcaccgtgtccttaatggcggaccatggttttacagcagttcgatgttggtgctggcggattacgatggtatcagttcattggcggcggtgtctctccatcatctagaggtttgggtagcagtgaaggggttgcgattcttgcgaatggccatgcggaatgagcgtgccctaaacctcctcgggaatgatatgggggtttttgttcgggctgacatcatggcggtgcagcgcaaggatctggttcagagggtccgagtgatccatgatgtgctccggagaatttgggcccgacatctatatagcttttcgccagaggtctcgtttcttttggatttccggtatgaaaagtgtcacagcatctgcctggagtgcgggttgtttggccatggaggtggggtttgcaataagggtttcgtggccatgggcgtgttgcagcctggtccggaacacgtagagcgcttgctagcaacggtggggacggtgccgattgggaaggtgcaggttcaggtgcagcatgggtttgagcagcatgggttggtgttgccgaaagcggagctggaggtgaggcaggccggcatggaggctattccagaggcgaccccgattttttcggcgggagaccctaaattcaatttagggttgacccttgggttgggtttggctggactgaaagaagttgggtcgggttctgtgaaggcttatgggcccattactgagggatggaacccaactactgcattgggtgtgcgcaagtctcgtgacgttgagctgatccaagatgagaagcgactctgtttggcgcctatttccagaggaatcttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

358

Amino Acids

39.42

Weight (kDa)

8.48

Isoelectric Point (pI)

37.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1001
Acc36I ACCTGC 1 cut(s) 742
AccB1I GGYRCC 3 cut(s) 7, 733, 1051
AccBSI CCGCTC 2 cut(s) 41, 187
AccIII TCCGGA 2 cut(s) 525, 694
AclWI GGATC 6 cut(s) 133, 190, 197, 495, 505, 1018
AcoI YGGCCR 4 cut(s) 106, 399, 634, 669
AcsI RAATTY 2 cut(s) 531, 878
AcyI GRCGYC 1 cut(s) 1052
AfeI AGCGCT 1 cut(s) 710
AfiI CCNNNNNNNGG 4 cut(s) 64, 205, 235, 904
AflII CTTAAG 1 cut(s) 179
AflIII ACRYGT 1 cut(s) 700
AgsI TTSAA 2 cut(s) 235, 883
AjnI CCWGG 3 cut(s) 81, 615, 688
AluBI AGCT 3 cut(s) 555, 808, 1021
AluI AGCT 3 cut(s) 555, 808, 1021
Alw21I GWGCWC 1 cut(s) 525
Alw26I GTCTC 5 cut(s) 166, 348, 574, 864, 1011
AlwI GGATC 6 cut(s) 133, 190, 197, 495, 505, 1018
AlwNI CAGNNNCTG 1 cut(s) 612
Ama87I CYCGRG 1 cut(s) 431
Aor13HI TCCGGA 2 cut(s) 525, 694
Aor51HI AGCGCT 1 cut(s) 710
AoxI GGCC 9 cut(s) 20, 48, 106, 399, 537, 634, 669, 822, 956
ApaI GGGCCC 2 cut(s) 541, 960
ApeKI GCWGC 5 cut(s) 69, 478, 685, 763, 778
ApoI RAATTY 2 cut(s) 531, 878
AspLEI GCGC 4 cut(s) 483, 711, 1002, 1054
AspS9I GGNCC 8 cut(s) 85, 272, 502, 537, 538, 692, 956, 957
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 1 cut(s) 826
AsuNHI GCTAGC 1 cut(s) 715
AvaI CYCGRG 1 cut(s) 431
AvaII GGWCC 4 cut(s) 85, 272, 502, 692
BaeGI GKGCMC 3 cut(s) 421, 541, 960
BaeI ACNNNNGTAYC 2 cut(s) 304, 337
BalI TGGCCA 3 cut(s) 401, 636, 671
BanI GGYRCC 3 cut(s) 7, 733, 1051
BanII GRGCYC 2 cut(s) 541, 960
BauI CACGAG 1 cut(s) 1008
Bbv12I GWGCWC 1 cut(s) 525
BbvI GCAGC 5 cut(s) 81, 490, 697, 775, 790
BccI CCATC 4 cut(s) 206, 311, 357, 966
BceAI ACGGC 3 cut(s) 7, 35, 168
BcgI CGANNNNNNTGC 2 cut(s) 283, 317
BciT130I CCWGG 3 cut(s) 83, 617, 690
BcnI CCSGG 1 cut(s) 200
BcoDI GTCTC 5 cut(s) 166, 348, 574, 864, 1011
BfaI CTAG 3 cut(s) 18, 356, 716
BfoI RGCGCY 2 cut(s) 712, 1055
BfrI CTTAAG 1 cut(s) 179
BfuAI ACCTGC 1 cut(s) 742
BisI GCNGC 8 cut(s) 70, 109, 156, 336, 479, 686, 764, 779
BlsI GCNGC 8 cut(s) 71, 110, 157, 337, 480, 687, 765, 780
Bme1390I CCNGG 4 cut(s) 83, 200, 617, 690
Bme18I GGWCC 4 cut(s) 85, 272, 502, 692
BmeT110I CYCGRG 1 cut(s) 431
BmgT120I GGNCC 8 cut(s) 85, 272, 502, 537, 538, 692, 956, 957
BmiI GGNNCC 8 cut(s) 9, 87, 503, 539, 735, 958, 977, 1053
BmrFI CCNGG 4 cut(s) 83, 200, 617, 690
BmsI GCATC 1 cut(s) 618
BmtI GCTAGC 1 cut(s) 719
BpmI CTGGAG 2 cut(s) 638, 830
BpuMI CCSGG 1 cut(s) 200
BsaAI YACGTR 1 cut(s) 703
BsaBI GATNNNNATC 1 cut(s) 194
BsaHI GRCGYC 1 cut(s) 1052
BsaI GGTCTC 2 cut(s) 574, 864
BsaJI CCNNGG 5 cut(s) 275, 430, 637, 672, 898
BsaWI WCCGGW 3 cut(s) 525, 588, 694
BsaXI ACNNNNNCTCC 6 cut(s) 207, 237, 611, 633, 641, 663
Bsc4I CCNNNNNNNGG 4 cut(s) 64, 205, 235, 904
Bse118I RCCGGY 1 cut(s) 824
Bse1I ACTGG 1 cut(s) 229
Bse8I GATNNNNATC 1 cut(s) 194
BseAI TCCGGA 2 cut(s) 525, 694
BseBI CCWGG 3 cut(s) 83, 617, 690
BseDI CCNNGG 5 cut(s) 275, 430, 637, 672, 898
BseGI GGATG 1 cut(s) 977
BseJI GATNNNNATC 1 cut(s) 194
BseLI CCNNNNNNNGG 4 cut(s) 64, 205, 235, 904
BseMII CTCAG 1 cut(s) 957
BseNI ACTGG 1 cut(s) 229
BseRI GAGGAG 2 cut(s) 218, 419
BseSI GKGCMC 3 cut(s) 421, 541, 960
BseXI GCAGC 5 cut(s) 81, 490, 697, 775, 790
BsgI GTGCAG 3 cut(s) 497, 770, 782
BshFI GGCC 9 cut(s) 22, 50, 108, 401, 539, 636, 671, 824, 958
BshNI GGYRCC 3 cut(s) 7, 733, 1051
BsiHKAI GWGCWC 1 cut(s) 525
BsiHKCI CYCGRG 1 cut(s) 431
BsiSI CCGG 5 cut(s) 199, 526, 589, 695, 825
BslFI GGGAC 1 cut(s) 742
BslI CCNNNNNNNGG 4 cut(s) 64, 205, 235, 904
BsmAI GTCTC 5 cut(s) 166, 348, 574, 864, 1011
BsmFI GGGAC 1 cut(s) 742
BsnI GGCC 9 cut(s) 22, 50, 108, 401, 539, 636, 671, 824, 958
Bso31I GGTCTC 2 cut(s) 574, 864
BsoBI CYCGRG 1 cut(s) 431
Bsp120I GGGCCC 2 cut(s) 537, 956
Bsp1286I GDGCHC 4 cut(s) 421, 525, 541, 960
Bsp13I TCCGGA 2 cut(s) 525, 694
Bsp143I GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
Bsp19I CCATGG 3 cut(s) 275, 637, 672
BspANI GGCC 9 cut(s) 22, 50, 108, 401, 539, 636, 671, 824, 958
BspCNI CTCAG 1 cut(s) 958
BspEI TCCGGA 2 cut(s) 525, 694
BspLI GGNNCC 8 cut(s) 9, 87, 503, 539, 735, 958, 977, 1053
BspMI ACCTGC 1 cut(s) 742
BspOI GCTAGC 1 cut(s) 719
BspPI GGATC 6 cut(s) 133, 190, 197, 495, 505, 1018
BspT107I GGYRCC 3 cut(s) 7, 733, 1051
BspTI CTTAAG 1 cut(s) 179
BspTNI GGTCTC 2 cut(s) 574, 864
BsrBI CCGCTC 2 cut(s) 41, 187
BsrFI RCCGGY 1 cut(s) 824
BsrI ACTGG 1 cut(s) 229
BssAI RCCGGY 1 cut(s) 824
BssECI CCNNGG 5 cut(s) 275, 430, 637, 672, 898
BssMI GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
BssNI GRCGYC 1 cut(s) 1052
BssSI CACGAG 1 cut(s) 1008
BssT1I CCWWGG 4 cut(s) 275, 637, 672, 898
Bst2BI CACGAG 1 cut(s) 1008
Bst2UI CCWGG 3 cut(s) 83, 617, 690
Bst4CI ACNGT 3 cut(s) 257, 724, 733
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 1 cut(s) 1052
BstAFI CTTAAG 1 cut(s) 179
BstBAI YACGTR 1 cut(s) 703
BstC8I GCNNGC 7 cut(s) 59, 306, 417, 713, 717, 822, 826
BstDEI CTNAG 1 cut(s) 966
BstDSI CCRYGG 3 cut(s) 275, 637, 672
BstF5I GGATG 1 cut(s) 977
BstH2I RGCGCY 2 cut(s) 712, 1055
BstHHI GCGC 4 cut(s) 483, 711, 1002, 1054
BstKTI GATC 6 cut(s) 141, 192, 198, 490, 513, 1026
BstMAI GTCTC 5 cut(s) 166, 348, 574, 864, 1011
BstMBI GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
BstMWI GCNNNNNNNGC 6 cut(s) 28, 47, 184, 391, 412, 621
BstNI CCWGG 3 cut(s) 83, 617, 690
BstSCI CCNGG 4 cut(s) 81, 198, 615, 688
BstSLI GKGCMC 3 cut(s) 421, 541, 960
BstV1I GCAGC 5 cut(s) 81, 490, 697, 775, 790
BstX2I RGATCY 2 cut(s) 189, 487
BstXI CCANNNNNNTGG 1 cut(s) 644
BstYI RGATCY 2 cut(s) 189, 487
BsuRI GGCC 9 cut(s) 22, 50, 108, 401, 539, 636, 671, 824, 958
BtgI CCRYGG 3 cut(s) 275, 637, 672
BtsCI GGATG 1 cut(s) 977
BtsI GCAGTG 1 cut(s) 378
BtsIMutI CAGTG 1 cut(s) 378
BveI ACCTGC 1 cut(s) 742
Cac8I GCNNGC 7 cut(s) 59, 306, 417, 713, 717, 822, 826
CaiI CAGNNNCTG 1 cut(s) 612
CfoI GCGC 4 cut(s) 483, 711, 1002, 1054
Cfr10I RCCGGY 1 cut(s) 824
Cfr13I GGNCC 8 cut(s) 85, 272, 502, 537, 538, 692, 956, 957
CviAII CATG 9 cut(s) 276, 403, 469, 515, 638, 673, 767, 782, 829
DdeI CTNAG 1 cut(s) 966
DinI GGCGCC 1 cut(s) 1053
DpnI GATC 6 cut(s) 140, 191, 197, 489, 512, 1025
DpnII GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
EaeI YGGCCR 4 cut(s) 106, 399, 634, 669
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
EciI GGCGGA 2 cut(s) 285, 323
Eco130I CCWWGG 4 cut(s) 275, 637, 672, 898
Eco24I GRGCYC 2 cut(s) 541, 960
Eco31I GGTCTC 2 cut(s) 574, 864
Eco47I GGWCC 4 cut(s) 85, 272, 502, 692
Eco47III AGCGCT 1 cut(s) 710
Eco88I CYCGRG 1 cut(s) 431
EcoO109I RGGNCCY 1 cut(s) 85
EcoRII CCWGG 3 cut(s) 81, 615, 688
EcoT14I CCWWGG 4 cut(s) 275, 637, 672, 898
EcoT38I GRGCYC 2 cut(s) 541, 960
EgeI GGCGCC 1 cut(s) 1053
EheI GGCGCC 1 cut(s) 1053
ErhI CCWWGG 4 cut(s) 275, 637, 672, 898
FaeI CATG 9 cut(s) 279, 406, 472, 518, 641, 676, 770, 785, 832
FaqI GGGAC 1 cut(s) 742
FatI CATG 9 cut(s) 275, 402, 468, 514, 637, 672, 766, 781, 828
FauI CCCGC 2 cut(s) 617, 859
Fnu4HI GCNGC 8 cut(s) 70, 109, 156, 336, 479, 686, 764, 779
FokI GGATG 1 cut(s) 984
FriOI GRGCYC 2 cut(s) 541, 960
Fsp4HI GCNGC 8 cut(s) 70, 109, 156, 336, 479, 686, 764, 779
FspBI CTAG 3 cut(s) 18, 356, 716
FspI TGCGCA 1 cut(s) 1001
GlaI GCGC 4 cut(s) 482, 710, 1001, 1053
GluI GCNGC 8 cut(s) 70, 109, 156, 336, 479, 686, 764, 779
GsuI CTGGAG 2 cut(s) 638, 830
HaeII RGCGCY 2 cut(s) 712, 1055
HaeIII GGCC 9 cut(s) 22, 50, 108, 401, 539, 636, 671, 824, 958
HapII CCGG 5 cut(s) 199, 526, 589, 695, 825
HhaI GCGC 4 cut(s) 483, 711, 1002, 1054
Hin1I GRCGYC 1 cut(s) 1052
Hin1II CATG 9 cut(s) 279, 406, 472, 518, 641, 676, 770, 785, 832
Hin6I GCGC 4 cut(s) 481, 709, 1000, 1052
HinP1I GCGC 4 cut(s) 481, 709, 1000, 1052
HincII GTYRAC 1 cut(s) 894
HindII GTYRAC 1 cut(s) 894
HinfI GANTC 3 cut(s) 387, 1041, 1068
HpaII CCGG 5 cut(s) 199, 526, 589, 695, 825
HphI GGTGA 1 cut(s) 826
Hpy166II GTNNAC 1 cut(s) 894
Hpy188I TCNGA 4 cut(s) 123, 168, 498, 506
Hpy188III TCNNGA 8 cut(s) 193, 356, 433, 526, 695, 842, 1010, 1062
Hpy8I GTNNAC 1 cut(s) 894
Hpy99I CGWCG 3 cut(s) 16, 28, 148
HpyAV CCTTC 5 cut(s) 29, 100, 370, 739, 940
HpyCH4III ACNGT 3 cut(s) 257, 724, 733
HpyCH4IV ACGT 2 cut(s) 702, 1014
HpyCH4V TGCA 6 cut(s) 478, 654, 685, 751, 763, 989
HpyF10VI GCNNNNNNNGC 6 cut(s) 28, 47, 184, 391, 412, 621
HpyF3I CTNAG 1 cut(s) 966
HpySE526I ACGT 2 cut(s) 702, 1014
Hsp92I GRCGYC 1 cut(s) 1052
Hsp92II CATG 9 cut(s) 279, 406, 472, 518, 641, 676, 770, 785, 832
HspAI GCGC 4 cut(s) 481, 709, 1000, 1052
KasI GGCGCC 1 cut(s) 1051
Kpn2I TCCGGA 2 cut(s) 525, 694
KroI GCCGGC 1 cut(s) 824
KroNI GCCGGC 1 cut(s) 826
Kzo9I GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
LmnI GCTCC 4 cut(s) 38, 184, 528, 805
Lsp1109I GCAGC 5 cut(s) 81, 490, 697, 775, 790
LweI GCATC 1 cut(s) 618
MaeI CTAG 3 cut(s) 18, 356, 716
MaeII ACGT 2 cut(s) 702, 1014
MaeIII GTNAC 2 cut(s) 602, 1010
MalI GATC 6 cut(s) 140, 191, 197, 489, 512, 1025
MbiI CCGCTC 2 cut(s) 41, 187
MboI GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
MboII GAAGA 3 cut(s) 56, 136, 221
MflI RGATCY 2 cut(s) 189, 487
MhlI GDGCHC 4 cut(s) 421, 525, 541, 960
MlsI TGGCCA 3 cut(s) 401, 636, 671
MluCI AATT 3 cut(s) 531, 878, 883
MluNI TGGCCA 3 cut(s) 401, 636, 671
Mly113I GGCGCC 1 cut(s) 1052
MlyI GAGTC 1 cut(s) 1035
Mox20I TGGCCA 3 cut(s) 401, 636, 671
MroI TCCGGA 2 cut(s) 525, 694
MroNI GCCGGC 1 cut(s) 824
MscI TGGCCA 3 cut(s) 401, 636, 671
MseI TTAA 3 cut(s) 180, 249, 264
MslI CAYNNNNRTG 3 cut(s) 473, 642, 677
Msp20I TGGCCA 3 cut(s) 401, 636, 671
MspCI CTTAAG 1 cut(s) 179
MspI CCGG 5 cut(s) 199, 526, 589, 695, 825
MspR9I CCNGG 4 cut(s) 83, 200, 617, 690
MvaI CCWGG 3 cut(s) 83, 617, 690
MwoI GCNNNNNNNGC 6 cut(s) 28, 47, 184, 391, 412, 621
NaeI GCCGGC 1 cut(s) 826
NarI GGCGCC 1 cut(s) 1052
NciI CCSGG 1 cut(s) 200
NcoI CCATGG 3 cut(s) 275, 637, 672
NdeII GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
NgoMIV GCCGGC 1 cut(s) 824
NheI GCTAGC 1 cut(s) 715
NlaIII CATG 9 cut(s) 279, 406, 472, 518, 641, 676, 770, 785, 832
NlaIV GGNNCC 8 cut(s) 9, 87, 503, 539, 735, 958, 977, 1053
NmuCI GTSAC 2 cut(s) 602, 1010
NsbI TGCGCA 1 cut(s) 1001
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PdiI GCCGGC 1 cut(s) 826
PfeI GAWTC 2 cut(s) 387, 1068
PfoI TCCNGGA 2 cut(s) 81, 198
PkrI GCNGC 8 cut(s) 71, 110, 157, 337, 480, 687, 765, 780
PleI GAGTC 1 cut(s) 1035
PluTI GGCGCC 1 cut(s) 1055
PpsI GAGTC 1 cut(s) 1035
Ppu21I YACGTR 1 cut(s) 703
PpuMI RGGWCCY 1 cut(s) 85
Psp5II RGGWCCY 1 cut(s) 85
Psp6I CCWGG 3 cut(s) 81, 615, 688
PspGI CCWGG 3 cut(s) 81, 615, 688
PspN4I GGNNCC 8 cut(s) 9, 87, 503, 539, 735, 958, 977, 1053
PspOMI GGGCCC 2 cut(s) 537, 956
PspPI GGNCC 8 cut(s) 85, 272, 502, 537, 538, 692, 956, 957
PspPPI RGGWCCY 1 cut(s) 85
PstNI CAGNNNCTG 1 cut(s) 612
PsuI RGATCY 2 cut(s) 189, 487
RseI CAYNNNNRTG 3 cut(s) 473, 642, 677
SaqAI TTAA 3 cut(s) 180, 249, 264
SatI GCNGC 8 cut(s) 70, 109, 156, 336, 479, 686, 764, 779
Sau3AI GATC 6 cut(s) 138, 189, 195, 487, 510, 1023
Sau96I GGNCC 8 cut(s) 85, 272, 502, 537, 538, 692, 956, 957
SchI GAGTC 1 cut(s) 1035
ScrFI CCNGG 4 cut(s) 83, 200, 617, 690
SduI GDGCHC 4 cut(s) 421, 525, 541, 960
SfaNI GCATC 1 cut(s) 618
SfoI GGCGCC 1 cut(s) 1053
SinI GGWCC 4 cut(s) 85, 272, 502, 692
SmiMI CAYNNNNRTG 3 cut(s) 473, 642, 677
SmlI CTYRAG 1 cut(s) 179
SmoI CTYRAG 1 cut(s) 179
Sse9I AATT 3 cut(s) 531, 878, 883
SspDI GGCGCC 1 cut(s) 1051
SspMI CTAG 3 cut(s) 18, 356, 716
StyD4I CCNGG 4 cut(s) 81, 198, 615, 688
StyI CCWWGG 4 cut(s) 275, 637, 672, 898
TaaI ACNGT 3 cut(s) 257, 724, 733
TaiI ACGT 2 cut(s) 705, 1017
TaqI TCGA 1 cut(s) 293
TasI AATT 3 cut(s) 531, 878, 883
TauI GCSGC 3 cut(s) 111, 158, 338
TfiI GAWTC 2 cut(s) 387, 1068
Tru1I TTAA 3 cut(s) 180, 249, 264
Tru9I TTAA 3 cut(s) 180, 249, 264
TscAI CASTG 1 cut(s) 378
TseFI GTSAC 2 cut(s) 602, 1010
TseI GCWGC 5 cut(s) 69, 478, 685, 763, 778
Tsp45I GTSAC 2 cut(s) 602, 1010
TspDTI ATGAA 2 cut(s) 318, 609
TspRI CASTG 1 cut(s) 378
Vha464I CTTAAG 1 cut(s) 179
VpaK11BI GGWCC 4 cut(s) 85, 272, 502, 692
XapI RAATTY 2 cut(s) 531, 878
XbaI TCTAGA 1 cut(s) 355
XspI CTAG 3 cut(s) 18, 356, 716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.