Rmu_sc0022945.1_g000001

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022945.1
OG0000123
Physical Location & Seq
Reverse (-)
444 .. 1516
1073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022945.1_g000001.1.cds

Sequence Viewer

Length: 786 bp
atggaggcggcttctagcctgtcgttgttggagggtgtggaagaggctgtgagcctggagagggtcttgatccgtgaggaggctgcgggagtttttgtcttccagttcaaggatcatgaggagaagaaccgtgttcttaatggagggtcgtggttctacagtggctccatgctggtgttggtagactacgacggaatcaggtcggtggaggcgatgcctttgcattacttggagatctgggtggcggtgaaggggttgcgaattgccatgcgcaatgagcgagctttaactctacttgggaatgcgttggggacttttgttcggcttgatgtggcggcgttgcaacggaaagatcatgtccaaaggatccgtctgatccatgacgtccgccgacggaaattccacggcatctgcccgacatgtggcttttttggtcacggtggaggtagttgtgataaagggttgatggcggaggcttcagcgttgttggcgtcggtcacagagcctgagatgactggaacaatagcggagcatgctgggctggtgtcggaaactagtgcagaaactagggttgaggaaaatgagccgagccttactcatagcactgttggatccaaggttggtattgggccttctcttcctttctttggagagccagctaaggttttgggtaatcgacgaccacgtgaagctgcttcgctggaggttggcaagcgtcctaagctagcatttcctctggatgtgcagccagaagctttagtggacgtcccggttgcttttatttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

261

Amino Acids

28.43

Weight (kDa)

5.94

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 387, 768
Acc16I TGCGCA 1 cut(s) 272
AccI GTMKAC 1 cut(s) 183
AciI CCGC 7 cut(s) 8, 86, 245, 335, 388, 470, 527
AclWI GGATC 7 cut(s) 64, 120, 361, 370, 374, 606, 619
AcsI RAATTY 1 cut(s) 398
AcuI CTGAAG 1 cut(s) 462
AcvI CACGTG 1 cut(s) 686
AcyI GRCGYC 3 cut(s) 384, 491, 765
AfiI CCNNNNNNNGG 5 cut(s) 61, 79, 109, 422, 647
AflIII ACRYGT 1 cut(s) 419
AgsI TTSAA 1 cut(s) 109
AhlI ACTAGT 1 cut(s) 554
AjnI CCWGG 1 cut(s) 54
AluBI AGCT 5 cut(s) 284, 659, 692, 724, 755
AluI AGCT 5 cut(s) 284, 659, 692, 724, 755
AlwI GGATC 7 cut(s) 64, 120, 361, 370, 374, 606, 619
AlwNI CAGNNNCTG 1 cut(s) 506
AoxI GGCC 1 cut(s) 629
ApeKI GCWGC 3 cut(s) 83, 692, 745
ApoI RAATTY 1 cut(s) 398
ArsI GACNNNNNNTTYG 2 cut(s) 355, 387
AspLEI GCGC 1 cut(s) 273
AspS9I GGNCC 1 cut(s) 629
AsuC2I CCSGG 1 cut(s) 770
AsuHPI GGTGA 1 cut(s) 259
AsuNHI GCTAGC 1 cut(s) 724
BamHI GGATCC 2 cut(s) 366, 611
BarI GAAGNNNNNNTAC 2 cut(s) 616, 648
BbrPI CACGTG 1 cut(s) 686
BbsI GAAGAC 1 cut(s) 91
BbvI GCAGC 3 cut(s) 70, 679, 757
BccI CCATC 1 cut(s) 460
BceAI ACGGC 1 cut(s) 421
BcgI CGANNNNNNTGC 2 cut(s) 202, 236
BciT130I CCWGG 1 cut(s) 56
BcnI CCSGG 1 cut(s) 770
BcuI ACTAGT 1 cut(s) 554
BfaI CTAG 4 cut(s) 15, 555, 567, 725
BfmI CTRYAG 1 cut(s) 157
BglII AGATCT 1 cut(s) 234
BisI GCNGC 5 cut(s) 9, 84, 336, 693, 746
BlsI GCNGC 5 cut(s) 10, 85, 337, 694, 747
Bme1390I CCNGG 2 cut(s) 56, 770
BmgT120I GGNCC 1 cut(s) 629
BmiI GGNNCC 3 cut(s) 166, 368, 613
BmrFI CCNGG 2 cut(s) 56, 770
BmsI GCATC 2 cut(s) 204, 417
BmtI GCTAGC 1 cut(s) 728
BpiI GAAGAC 1 cut(s) 91
BplI GAGNNNNNCTC 2 cut(s) 580, 612
BpmI CTGGAG 2 cut(s) 77, 722
Bpu10I CCTNAGC 2 cut(s) 660, 720
BpuMI CCSGG 1 cut(s) 770
BsaAI YACGTR 1 cut(s) 686
BsaHI GRCGYC 3 cut(s) 384, 491, 765
BsaJI CCNNGG 2 cut(s) 403, 615
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 149, 179
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 79, 109, 422, 647
Bse1I ACTGG 2 cut(s) 103, 520
Bse3DI GCAATG 1 cut(s) 280
BseBI CCWGG 1 cut(s) 56
BseDI CCNNGG 2 cut(s) 403, 615
BseGI GGATG 1 cut(s) 745
BseLI CCNNNNNNNGG 5 cut(s) 61, 79, 109, 422, 647
BseMI GCAATG 1 cut(s) 280
BseMII CTCAG 1 cut(s) 498
BseNI ACTGG 2 cut(s) 103, 520
BseRI GAGGAG 2 cut(s) 92, 134
BseXI GCAGC 3 cut(s) 70, 679, 757
BseYI CCCAGC 1 cut(s) 536
BsgI GTGCAG 2 cut(s) 579, 764
BshFI GGCC 1 cut(s) 631
BsiSI CCGG 1 cut(s) 770
BslFI GGGAC 2 cut(s) 325, 752
BslI CCNNNNNNNGG 5 cut(s) 61, 79, 109, 422, 647
BsmFI GGGAC 2 cut(s) 325, 752
BsmI GAATGC 1 cut(s) 307
BsnI GGCC 1 cut(s) 631
Bsp143I GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
BspACI CCGC 7 cut(s) 8, 86, 245, 335, 388, 470, 527
BspANI GGCC 1 cut(s) 631
BspCNI CTCAG 1 cut(s) 499
BspHI TCATGA 1 cut(s) 115
BspLI GGNNCC 3 cut(s) 166, 368, 613
BspOI GCTAGC 1 cut(s) 728
BspPI GGATC 7 cut(s) 64, 120, 361, 370, 374, 606, 619
BsrDI GCAATG 1 cut(s) 280
BsrI ACTGG 2 cut(s) 103, 520
BssECI CCNNGG 2 cut(s) 403, 615
BssMI GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
BssNI GRCGYC 3 cut(s) 384, 491, 765
BssT1I CCWWGG 1 cut(s) 615
Bst2UI CCWGG 1 cut(s) 56
Bst4CI ACNGT 4 cut(s) 131, 161, 440, 607
Bst6I CTCTTC 2 cut(s) 36, 642
BstACI GRCGYC 3 cut(s) 384, 491, 765
BstBAI YACGTR 1 cut(s) 686
BstC8I GCNNGC 5 cut(s) 282, 534, 657, 713, 726
BstDEI CTNAG 3 cut(s) 507, 660, 720
BstDSI CCRYGG 1 cut(s) 403
BstF5I GGATG 1 cut(s) 745
BstHHI GCGC 1 cut(s) 273
BstKTI GATC 7 cut(s) 72, 115, 237, 355, 369, 378, 614
BstMBI GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
BstMWI GCNNNNNNNGC 5 cut(s) 277, 488, 533, 538, 721
BstNI CCWGG 1 cut(s) 56
BstNSI RCATGY 2 cut(s) 423, 536
BstSCI CCNGG 2 cut(s) 54, 768
BstSFI CTRYAG 1 cut(s) 157
BstV1I GCAGC 3 cut(s) 70, 679, 757
BstV2I GAAGAC 1 cut(s) 91
BstX2I RGATCY 3 cut(s) 234, 366, 611
BstYI RGATCY 3 cut(s) 234, 366, 611
BsuRI GGCC 1 cut(s) 631
BtgI CCRYGG 1 cut(s) 403
BtgZI GCGATG 1 cut(s) 227
BtsCI GGATG 1 cut(s) 745
BtsIMutI CAGTG 2 cut(s) 166, 603
Cac8I GCNNGC 5 cut(s) 282, 534, 657, 713, 726
CaiI CAGNNNCTG 1 cut(s) 506
CciI TCATGA 1 cut(s) 115
CfoI GCGC 1 cut(s) 273
Cfr13I GGNCC 1 cut(s) 629
CseI GACGC 2 cut(s) 480, 704
CviAII CATG 7 cut(s) 116, 169, 268, 356, 380, 420, 533
DdeI CTNAG 3 cut(s) 507, 660, 720
DpnI GATC 7 cut(s) 71, 114, 236, 354, 368, 377, 613
DpnII GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
Eam1104I CTCTTC 2 cut(s) 36, 642
EarI CTCTTC 2 cut(s) 36, 642
EciI GGCGGA 2 cut(s) 377, 485
Eco130I CCWWGG 1 cut(s) 615
Eco57I CTGAAG 1 cut(s) 462
Eco72I CACGTG 1 cut(s) 686
EcoRII CCWGG 1 cut(s) 54
EcoT14I CCWWGG 1 cut(s) 615
ErhI CCWWGG 1 cut(s) 615
FaeI CATG 7 cut(s) 119, 172, 271, 359, 383, 423, 536
FaiI YATR 8 cut(s) 117, 170, 269, 357, 381, 421, 534, 600
FaqI GGGAC 2 cut(s) 325, 752
FatI CATG 7 cut(s) 115, 168, 267, 355, 379, 419, 532
FauI CCCGC 1 cut(s) 79
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 5 cut(s) 9, 84, 336, 693, 746
FokI GGATG 1 cut(s) 752
Fsp4HI GCNGC 5 cut(s) 9, 84, 336, 693, 746
FspBI CTAG 4 cut(s) 15, 555, 567, 725
FspI TGCGCA 1 cut(s) 272
GlaI GCGC 1 cut(s) 272
GluI GCNGC 5 cut(s) 9, 84, 336, 693, 746
GsaI CCCAGC 1 cut(s) 540
GsuI CTGGAG 2 cut(s) 77, 722
HaeIII GGCC 1 cut(s) 631
HapII CCGG 1 cut(s) 770
HgaI GACGC 2 cut(s) 480, 704
HhaI GCGC 1 cut(s) 273
Hin1I GRCGYC 3 cut(s) 384, 491, 765
Hin1II CATG 7 cut(s) 119, 172, 271, 359, 383, 423, 536
Hin6I GCGC 1 cut(s) 271
HinP1I GCGC 1 cut(s) 271
HindIII AAGCTT 1 cut(s) 753
HinfI GANTC 1 cut(s) 195
HpaII CCGG 1 cut(s) 770
HphI GGTGA 1 cut(s) 259
Hpy166II GTNNAC 2 cut(s) 184, 763
Hpy188I TCNGA 2 cut(s) 375, 550
Hpy188III TCNNGA 3 cut(s) 67, 116, 737
Hpy8I GTNNAC 2 cut(s) 184, 763
Hpy99I CGWCG 4 cut(s) 194, 396, 496, 681
HpyAV CCTTC 2 cut(s) 244, 642
HpyCH4III ACNGT 4 cut(s) 131, 161, 440, 607
HpyCH4IV ACGT 3 cut(s) 384, 685, 765
HpyCH4V TGCA 4 cut(s) 223, 343, 560, 745
HpyF10VI GCNNNNNNNGC 5 cut(s) 277, 488, 533, 538, 721
HpyF3I CTNAG 3 cut(s) 507, 660, 720
HpySE526I ACGT 3 cut(s) 384, 685, 765
Hsp92I GRCGYC 3 cut(s) 384, 491, 765
Hsp92II CATG 7 cut(s) 119, 172, 271, 359, 383, 423, 536
HspAI GCGC 1 cut(s) 271
Kzo9I GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
LmnI GCTCC 2 cut(s) 170, 529
Lsp1109I GCAGC 3 cut(s) 70, 679, 757
LweI GCATC 2 cut(s) 204, 417
MaeI CTAG 4 cut(s) 15, 555, 567, 725
MaeII ACGT 3 cut(s) 384, 685, 765
MaeIII GTNAC 2 cut(s) 434, 496
MalI GATC 7 cut(s) 71, 114, 236, 354, 368, 377, 613
MboI GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
MboII GAAGA 4 cut(s) 53, 91, 136, 629
MflI RGATCY 3 cut(s) 234, 366, 611
MluCI AATT 2 cut(s) 261, 398
MmeI TCCRAC 3 cut(s) 9, 528, 589
MseI TTAA 2 cut(s) 138, 287
MslI CAYNNNNRTG 1 cut(s) 173
MspI CCGG 1 cut(s) 770
MspR9I CCNGG 2 cut(s) 56, 770
Mva1269I GAATGC 1 cut(s) 307
MvaI CCWGG 1 cut(s) 56
MwoI GCNNNNNNNGC 5 cut(s) 277, 488, 533, 538, 721
NciI CCSGG 1 cut(s) 770
NdeII GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
NheI GCTAGC 1 cut(s) 724
NlaIII CATG 7 cut(s) 119, 172, 271, 359, 383, 423, 536
NlaIV GGNNCC 3 cut(s) 166, 368, 613
NmeAIII GCCGAG 1 cut(s) 612
NmuCI GTSAC 2 cut(s) 434, 496
NsbI TGCGCA 1 cut(s) 272
NspI RCATGY 2 cut(s) 423, 536
PaeI GCATGC 1 cut(s) 536
PagI TCATGA 1 cut(s) 115
PciI ACATGT 1 cut(s) 419
PcsI WCGNNNNNNNCGW 2 cut(s) 209, 682
PctI GAATGC 1 cut(s) 307
PfeI GAWTC 1 cut(s) 195
PkrI GCNGC 5 cut(s) 10, 85, 337, 694, 747
PmaCI CACGTG 1 cut(s) 686
PmlI CACGTG 1 cut(s) 686
Ppu21I YACGTR 1 cut(s) 686
PscI ACATGT 1 cut(s) 419
Psp6I CCWGG 1 cut(s) 54
PspCI CACGTG 1 cut(s) 686
PspFI CCCAGC 1 cut(s) 536
PspGI CCWGG 1 cut(s) 54
PspN4I GGNNCC 3 cut(s) 166, 368, 613
PspPI GGNCC 1 cut(s) 629
PstNI CAGNNNCTG 1 cut(s) 506
PsuI RGATCY 3 cut(s) 234, 366, 611
RseI CAYNNNNRTG 1 cut(s) 173
SaqAI TTAA 2 cut(s) 138, 287
SatI GCNGC 5 cut(s) 9, 84, 336, 693, 746
Sau3AI GATC 7 cut(s) 69, 112, 234, 352, 366, 375, 611
Sau96I GGNCC 1 cut(s) 629
ScrFI CCNGG 2 cut(s) 56, 770
SfaNI GCATC 2 cut(s) 204, 417
SfcI CTRYAG 1 cut(s) 157
SmiMI CAYNNNNRTG 1 cut(s) 173
SpeI ACTAGT 1 cut(s) 554
SphI GCATGC 1 cut(s) 536
Sse9I AATT 2 cut(s) 261, 398
SsiI CCGC 7 cut(s) 8, 86, 245, 335, 388, 470, 527
SspMI CTAG 4 cut(s) 15, 555, 567, 725
StyD4I CCNGG 2 cut(s) 54, 768
StyI CCWWGG 1 cut(s) 615
TaaI ACNGT 4 cut(s) 131, 161, 440, 607
TaiI ACGT 3 cut(s) 387, 688, 768
TaqI TCGA 1 cut(s) 676
TaqII GACCGA 1 cut(s) 484
TasI AATT 2 cut(s) 261, 398
TauI GCSGC 2 cut(s) 11, 338
TfiI GAWTC 1 cut(s) 195
Tru1I TTAA 2 cut(s) 138, 287
Tru9I TTAA 2 cut(s) 138, 287
TscAI CASTG 2 cut(s) 166, 610
TseFI GTSAC 2 cut(s) 434, 496
TseI GCWGC 3 cut(s) 83, 692, 745
Tsp45I GTSAC 2 cut(s) 434, 496
TspGWI ACGGA 5 cut(s) 62, 207, 359, 361, 409
TspRI CASTG 2 cut(s) 166, 610
XapI RAATTY 1 cut(s) 398
XceI RCATGY 2 cut(s) 423, 536
XcmI CCANNNNNNNNNTGG 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 183
XspI CTAG 4 cut(s) 15, 555, 567, 725
ZraI GACGTC 2 cut(s) 385, 766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.