Rmu_sc0011069.1_g000001

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011069.1
OG0000123
Physical Location & Seq
Reverse (-)
1752 .. 2881
1130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011069.1_g000001.1.cds

Sequence Viewer

Length: 696 bp
atgacagtggcgtcatctaggaggtcgttactggaaggagtggcagaggccgtaagcttgcttgggggctacgaagcaatccaggaccctttcttttacctgtgtggccactttctctctccgaagaaacccattgtgatcttgtcactcgcagtggtagtctctgggatatgggggcttaaggagcggatcttgatctgggaggagggagatagagtctttgtcttccagttcaaggatgaggacgtgaagaaccatgtccttaatggcagaccatggttttacaatagctcgatgttggtgctggcggattacgaaggtatcagttcgttggaggcagtgtctctccagcatctggaggtttgggtagcggtgaaggggctgcgaatggccatgaggaatgagcgtgctctaagcctcctcaaaaatgatttgggggtttttgttcgggtggatatgacggcggtgcagctcaaggattcggtccagagggtccaggtttccaaatccggaaacccacctttctctctcctctcccccgagctctctccctttcccttcggtcttcttcttcttcccctcaattcaccgcctttaggccaccaaccggtgtgtaaccgaccatcacaggagcgcctcttcctcctctacaccctagtgaccatgggttacggcgatttggctggtaaaccctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

231

Amino Acids

25.71

Weight (kDa)

6.91

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 10
AccB7I CCANNNNNTGG 1 cut(s) 355
AccBSI CCGCTC 1 cut(s) 187
AccIII TCCGGA 1 cut(s) 509
AciI CCGC 5 cut(s) 187, 308, 371, 464, 590
AclWI GGATC 1 cut(s) 197
AcoI YGGCCR 2 cut(s) 106, 390
AcyI GRCGYC 1 cut(s) 11
AfiI CCNNNNNNNGG 4 cut(s) 235, 355, 596, 607
AflII CTTAAG 1 cut(s) 179
AgeI ACCGGT 1 cut(s) 607
AgsI TTSAA 1 cut(s) 235
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 2 cut(s) 81, 495
AleI CACNNNNGTG 1 cut(s) 656
AluBI AGCT 4 cut(s) 57, 291, 472, 544
AluI AGCT 4 cut(s) 57, 291, 472, 544
Alw21I GWGCWC 2 cut(s) 412, 546
Alw26I GTCTC 2 cut(s) 166, 348
AlwI GGATC 1 cut(s) 197
AlwNI CAGNNNCTG 1 cut(s) 355
Ama87I CYCGRG 1 cut(s) 539
Aor13HI TCCGGA 1 cut(s) 509
AoxI GGCC 4 cut(s) 48, 106, 390, 598
ApeKI GCWGC 2 cut(s) 382, 469
AsiGI ACCGGT 1 cut(s) 607
AspLEI GCGC 1 cut(s) 636
AspS9I GGNCC 3 cut(s) 85, 484, 493
AsuHPI GGTGA 2 cut(s) 385, 579
AvaI CYCGRG 1 cut(s) 539
AvaII GGWCC 3 cut(s) 85, 484, 493
BaeI ACNNNNGTAYC 2 cut(s) 304, 337
BalI TGGCCA 2 cut(s) 108, 392
BanII GRGCYC 1 cut(s) 546
BbsI GAAGAC 2 cut(s) 217, 557
Bbv12I GWGCWC 2 cut(s) 412, 546
BbvI GCAGC 2 cut(s) 369, 481
BccI CCATC 1 cut(s) 631
BceAI ACGGC 3 cut(s) 35, 477, 688
BcgI CGANNNNNNTGC 2 cut(s) 283, 317
BciT130I CCWGG 2 cut(s) 83, 497
BcoDI GTCTC 2 cut(s) 166, 348
BfaI CTAG 2 cut(s) 18, 656
BfoI RGCGCY 1 cut(s) 637
BfrI CTTAAG 1 cut(s) 179
BisI GCNGC 2 cut(s) 383, 470
BlsI GCNGC 2 cut(s) 384, 471
Bme1390I CCNGG 2 cut(s) 83, 497
Bme18I GGWCC 3 cut(s) 85, 484, 493
BmeT110I CYCGRG 1 cut(s) 539
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 3 cut(s) 85, 484, 493
BmiI GGNNCC 2 cut(s) 87, 494
BmrFI CCNGG 2 cut(s) 83, 497
BmsI GCATC 1 cut(s) 361
BpiI GAAGAC 2 cut(s) 217, 557
BpmI CTGGAG 2 cut(s) 332, 377
BpuEI CTTGAG 1 cut(s) 458
BsaBI GATNNNNATC 1 cut(s) 194
BsaHI GRCGYC 1 cut(s) 11
BsaJI CCNNGG 2 cut(s) 275, 663
BsaWI WCCGGW 2 cut(s) 509, 607
BsaXI ACNNNNNCTCC 4 cut(s) 201, 231, 326, 356
Bsc4I CCNNNNNNNGG 4 cut(s) 235, 355, 596, 607
Bse118I RCCGGY 1 cut(s) 607
Bse1I ACTGG 2 cut(s) 36, 229
Bse8I GATNNNNATC 1 cut(s) 194
BseAI TCCGGA 1 cut(s) 509
BseBI CCWGG 2 cut(s) 83, 497
BseDI CCNNGG 2 cut(s) 275, 663
BseGI GGATG 1 cut(s) 244
BseJI GATNNNNATC 1 cut(s) 194
BseLI CCNNNNNNNGG 4 cut(s) 235, 355, 596, 607
BseNI ACTGG 2 cut(s) 36, 229
BseRI GAGGAG 4 cut(s) 218, 410, 521, 635
BseXI GCAGC 2 cut(s) 369, 481
BsgI GTGCAG 1 cut(s) 488
BshFI GGCC 4 cut(s) 50, 108, 392, 600
BshTI ACCGGT 1 cut(s) 607
BsiHKAI GWGCWC 2 cut(s) 412, 546
BsiHKCI CYCGRG 1 cut(s) 539
BsiSI CCGG 2 cut(s) 510, 608
BslI CCNNNNNNNGG 4 cut(s) 235, 355, 596, 607
BsmAI GTCTC 2 cut(s) 166, 348
BsnI GGCC 4 cut(s) 50, 108, 392, 600
BsoBI CYCGRG 1 cut(s) 539
Bsp1286I GDGCHC 2 cut(s) 412, 546
Bsp13I TCCGGA 1 cut(s) 509
Bsp143I GATC 3 cut(s) 138, 189, 195
Bsp19I CCATGG 2 cut(s) 275, 663
BspACI CCGC 5 cut(s) 187, 308, 371, 464, 590
BspANI GGCC 4 cut(s) 50, 108, 392, 600
BspEI TCCGGA 1 cut(s) 509
BspLI GGNNCC 2 cut(s) 87, 494
BspPI GGATC 1 cut(s) 197
BspTI CTTAAG 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 187
BsrFI RCCGGY 1 cut(s) 607
BsrI ACTGG 2 cut(s) 36, 229
BssAI RCCGGY 1 cut(s) 607
BssECI CCNNGG 2 cut(s) 275, 663
BssMI GATC 3 cut(s) 138, 189, 195
BssNI GRCGYC 1 cut(s) 11
BssT1I CCWWGG 2 cut(s) 275, 663
Bst2UI CCWGG 2 cut(s) 83, 497
Bst4CI ACNGT 1 cut(s) 7
Bst6I CTCTTC 1 cut(s) 644
BstACI GRCGYC 1 cut(s) 11
BstAFI CTTAAG 1 cut(s) 179
BstC8I GCNNGC 3 cut(s) 59, 306, 408
BstDEI CTNAG 1 cut(s) 413
BstDSI CCRYGG 2 cut(s) 275, 663
BstF5I GGATG 1 cut(s) 244
BstH2I RGCGCY 1 cut(s) 637
BstHHI GCGC 1 cut(s) 636
BstKTI GATC 3 cut(s) 141, 192, 198
BstMAI GTCTC 2 cut(s) 166, 348
BstMBI GATC 3 cut(s) 138, 189, 195
BstMWI GCNNNNNNNGC 1 cut(s) 184
BstNI CCWGG 2 cut(s) 83, 497
BstSCI CCNGG 2 cut(s) 81, 495
BstV1I GCAGC 2 cut(s) 369, 481
BstV2I GAAGAC 2 cut(s) 217, 557
BstX2I RGATCY 1 cut(s) 189
BstYI RGATCY 1 cut(s) 189
BsuRI GGCC 4 cut(s) 50, 108, 392, 600
BtgI CCRYGG 2 cut(s) 275, 663
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 1 cut(s) 244
BtsI GCAGTG 2 cut(s) 159, 345
BtsIMutI CAGTG 3 cut(s) 12, 159, 345
Cac8I GCNNGC 3 cut(s) 59, 306, 408
CaiI CAGNNNCTG 1 cut(s) 355
CfoI GCGC 1 cut(s) 636
Cfr10I RCCGGY 1 cut(s) 607
Cfr13I GGNCC 3 cut(s) 85, 484, 493
CspAI ACCGGT 1 cut(s) 607
CviAII CATG 4 cut(s) 257, 276, 394, 664
DdeI CTNAG 1 cut(s) 413
DpnI GATC 3 cut(s) 140, 191, 197
DpnII GATC 3 cut(s) 138, 189, 195
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 2 cut(s) 106, 390
Eam1104I CTCTTC 1 cut(s) 644
EarI CTCTTC 1 cut(s) 644
EciI GGCGGA 1 cut(s) 323
Ecl136II GAGCTC 1 cut(s) 544
Eco130I CCWWGG 2 cut(s) 275, 663
Eco24I GRGCYC 1 cut(s) 546
Eco47I GGWCC 3 cut(s) 85, 484, 493
Eco53kI GAGCTC 1 cut(s) 544
Eco88I CYCGRG 1 cut(s) 539
EcoICRI GAGCTC 1 cut(s) 544
EcoO109I RGGNCCY 1 cut(s) 85
EcoRII CCWGG 2 cut(s) 81, 495
EcoT14I CCWWGG 2 cut(s) 275, 663
EcoT38I GRGCYC 1 cut(s) 546
ErhI CCWWGG 2 cut(s) 275, 663
FaeI CATG 4 cut(s) 260, 279, 397, 667
FaiI YATR 6 cut(s) 172, 258, 277, 395, 458, 665
FatI CATG 4 cut(s) 256, 275, 393, 663
Fnu4HI GCNGC 2 cut(s) 383, 470
FokI GGATG 1 cut(s) 251
FriOI GRGCYC 1 cut(s) 546
Fsp4HI GCNGC 2 cut(s) 383, 470
FspBI CTAG 2 cut(s) 18, 656
GlaI GCGC 1 cut(s) 635
GluI GCNGC 2 cut(s) 383, 470
GsuI CTGGAG 2 cut(s) 332, 377
HaeII RGCGCY 1 cut(s) 637
HaeIII GGCC 4 cut(s) 50, 108, 392, 600
HapII CCGG 2 cut(s) 510, 608
HhaI GCGC 1 cut(s) 636
Hin1I GRCGYC 1 cut(s) 11
Hin1II CATG 4 cut(s) 260, 279, 397, 667
Hin6I GCGC 1 cut(s) 634
HinP1I GCGC 1 cut(s) 634
HindIII AAGCTT 1 cut(s) 55
HinfI GANTC 2 cut(s) 216, 479
HpaII CCGG 2 cut(s) 510, 608
HphI GGTGA 2 cut(s) 385, 579
Hpy166II GTNNAC 1 cut(s) 689
Hpy188I TCNGA 1 cut(s) 123
Hpy188III TCNNGA 4 cut(s) 193, 356, 487, 510
Hpy8I GTNNAC 1 cut(s) 689
HpyAV CCTTC 4 cut(s) 29, 311, 370, 568
HpyCH4III ACNGT 1 cut(s) 7
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 1 cut(s) 469
HpyF10VI GCNNNNNNNGC 1 cut(s) 184
HpyF3I CTNAG 1 cut(s) 413
HpySE526I ACGT 1 cut(s) 246
Hsp92I GRCGYC 1 cut(s) 11
Hsp92II CATG 4 cut(s) 260, 279, 397, 667
HspAI GCGC 1 cut(s) 634
Kpn2I TCCGGA 1 cut(s) 509
Kzo9I GATC 3 cut(s) 138, 189, 195
LmnI GCTCC 2 cut(s) 184, 631
Lsp1109I GCAGC 2 cut(s) 369, 481
LweI GCATC 1 cut(s) 361
MaeI CTAG 2 cut(s) 18, 656
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 5 cut(s) 27, 144, 614, 658, 668
MalI GATC 3 cut(s) 140, 191, 197
MbiI CCGCTC 1 cut(s) 187
MboI GATC 3 cut(s) 138, 189, 195
MboII GAAGA 8 cut(s) 136, 217, 262, 557, 560, 563, 566, 631
MflI RGATCY 1 cut(s) 189
MhlI GDGCHC 2 cut(s) 412, 546
MlsI TGGCCA 2 cut(s) 108, 392
MluCI AATT 1 cut(s) 583
MluNI TGGCCA 2 cut(s) 108, 392
MlyI GAGTC 1 cut(s) 225
MmeI TCCRAC 1 cut(s) 312
Mox20I TGGCCA 2 cut(s) 108, 392
MroI TCCGGA 1 cut(s) 509
MscI TGGCCA 2 cut(s) 108, 392
MseI TTAA 2 cut(s) 180, 264
MslI CAYNNNNRTG 1 cut(s) 656
Msp20I TGGCCA 2 cut(s) 108, 392
MspCI CTTAAG 1 cut(s) 179
MspI CCGG 2 cut(s) 510, 608
MspR9I CCNGG 2 cut(s) 83, 497
MvaI CCWGG 2 cut(s) 83, 497
MwoI GCNNNNNNNGC 1 cut(s) 184
NcoI CCATGG 2 cut(s) 275, 663
NdeII GATC 3 cut(s) 138, 189, 195
NlaIII CATG 4 cut(s) 260, 279, 397, 667
NlaIV GGNNCC 2 cut(s) 87, 494
NmuCI GTSAC 2 cut(s) 144, 658
OliI CACNNNNGTG 1 cut(s) 656
PfeI GAWTC 1 cut(s) 479
PflMI CCANNNNNTGG 1 cut(s) 355
PfoI TCCNGGA 1 cut(s) 81
PinAI ACCGGT 1 cut(s) 607
PkrI GCNGC 2 cut(s) 384, 471
PleI GAGTC 1 cut(s) 224
PpsI GAGTC 1 cut(s) 224
PpuMI RGGWCCY 1 cut(s) 85
Psp124BI GAGCTC 1 cut(s) 546
Psp5II RGGWCCY 1 cut(s) 85
Psp6I CCWGG 2 cut(s) 81, 495
PspGI CCWGG 2 cut(s) 81, 495
PspN4I GGNNCC 2 cut(s) 87, 494
PspPI GGNCC 3 cut(s) 85, 484, 493
PspPPI RGGWCCY 1 cut(s) 85
PstNI CAGNNNCTG 1 cut(s) 355
PsuI RGATCY 1 cut(s) 189
RseI CAYNNNNRTG 1 cut(s) 656
SacI GAGCTC 1 cut(s) 546
SaqAI TTAA 2 cut(s) 180, 264
SatI GCNGC 2 cut(s) 383, 470
Sau3AI GATC 3 cut(s) 138, 189, 195
Sau96I GGNCC 3 cut(s) 85, 484, 493
SchI GAGTC 1 cut(s) 225
ScrFI CCNGG 2 cut(s) 83, 497
SduI GDGCHC 2 cut(s) 412, 546
SfaNI GCATC 1 cut(s) 361
SinI GGWCC 3 cut(s) 85, 484, 493
SmiMI CAYNNNNRTG 1 cut(s) 656
SmlI CTYRAG 2 cut(s) 179, 473
SmoI CTYRAG 2 cut(s) 179, 473
Sse9I AATT 1 cut(s) 583
SsiI CCGC 5 cut(s) 187, 308, 371, 464, 590
SspMI CTAG 2 cut(s) 18, 656
SstI GAGCTC 1 cut(s) 546
StyD4I CCNGG 2 cut(s) 81, 495
StyI CCWWGG 2 cut(s) 275, 663
TaaI ACNGT 1 cut(s) 7
TaiI ACGT 1 cut(s) 249
TaqI TCGA 1 cut(s) 293
TaqII GACCGA 2 cut(s) 472, 551
TasI AATT 1 cut(s) 583
TfiI GAWTC 1 cut(s) 479
Tru1I TTAA 2 cut(s) 180, 264
Tru9I TTAA 2 cut(s) 180, 264
TscAI CASTG 3 cut(s) 12, 159, 345
TseFI GTSAC 2 cut(s) 144, 658
TseI GCWGC 2 cut(s) 382, 469
Tsp45I GTSAC 2 cut(s) 144, 658
TspRI CASTG 3 cut(s) 12, 159, 345
Van91I CCANNNNNTGG 1 cut(s) 355
Vha464I CTTAAG 1 cut(s) 179
VpaK11BI GGWCC 3 cut(s) 85, 484, 493
XcmI CCANNNNNNNNNTGG 1 cut(s) 263
XspI CTAG 2 cut(s) 18, 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.