Rmu_sc0000335.1_g000105

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000335.1
OG0000123
Physical Location & Seq
Forward (+)
474385 .. 475572
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000335.1_g000105.1.cds

Sequence Viewer

Length: 1110 bp
atggcggcgaaagatgggacggggactcttgccttgtcgaatgcggccgtagtgagcctggttgggggcggagacttaatccacgaccctttcttttacctctgtgatcgtttgcttaacaagaaaccggtgatcattcagtcgttgtcgacggcgatctccgggatatggcggttgaatgagaaggtactgatccgtgaggaggagggggggatcttcgtgttccaattcaaggaacaggaggtgaaagaccgagttctacacggaggcccttggtactacagtaactcgatgctgttgttggcagactacgacggggctagcgctctgccggagattcctctgcactgtttggaggtttgggtggcggtgaagggtctgagagtttccatgcgcaatgatcgggctttaactcggattggcaatgttttgggaacttttgttagggttgaccaacttgtgttgcggaggaaggaggctgtccaaagaatctggctgatccatgacgttcgccggcgggtctgggttaagcgtgatttctttactcatgccggaaaagactgcgacaaaggcgtgctgctgggggaggccgagatcgatgcaggtttgtcgccggatgttgctactacgccatcgacagcacctgcgttgaaggaggtcgtggtttctaggtctgtggtgccggaggttggaagtggactggttgcaggcatggctgtgcaggcggaggttaaactgggtccgaggttttcgacgggaaatcctgattatgaattagggttgactgttgagtctgggttgaccaaggaaagggccagtgggccatctgttgggctatttgggtctgagggttgtggtctgttttcatttggacacccatctaaagtgttgggtgtgcgacgacttcatgaggaggattgggtcgaggacggaaaacgcatgaagcttgctgatggcttagttgaggttcctgttactgatgggaagattccgaagaagaagggtaggccccgtggtcatagaaataaacctaagcctgctcctgcttcggctgtagtgggctcggttgaggaggtaatggagaagaccaccctaccccaagagggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

369

Amino Acids

40.14

Weight (kDa)

8.55

Isoelectric Point (pI)

37.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 652
AasI GACNNNNNNGTC 1 cut(s) 790
Acc16I TGCGCA 1 cut(s) 395
Acc36I ACCTGC 2 cut(s) 593, 652
AccB1I GGYRCC 1 cut(s) 679
AccB7I CCANNNNNTGG 1 cut(s) 830
AccI GTMKAC 1 cut(s) 149
AciI CCGC 8 cut(s) 5, 44, 69, 172, 368, 466, 517, 725
AclWI GGATC 3 cut(s) 187, 221, 493
AcoI YGGCCR 1 cut(s) 45
AfaI GTAC 2 cut(s) 189, 278
AfeI AGCGCT 1 cut(s) 325
AfiI CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 689, 810, 830, 1103
AgeI ACCGGT 1 cut(s) 127
AgsI TTSAA 3 cut(s) 178, 232, 652
AjnI CCWGG 1 cut(s) 57
AluBI AGCT 1 cut(s) 946
AluI AGCT 1 cut(s) 946
Alw26I GTCTC 1 cut(s) 66
AlwI GGATC 3 cut(s) 187, 221, 493
AlwNI CAGNNNCTG 1 cut(s) 644
Aor51HI AGCGCT 1 cut(s) 325
AoxI GGCC 6 cut(s) 45, 268, 588, 813, 821, 1007
ApeKI GCWGC 1 cut(s) 577
AsiGI ACCGGT 1 cut(s) 127
AspLEI GCGC 2 cut(s) 326, 396
AspS9I GGNCC 5 cut(s) 269, 740, 813, 821, 1008
AsuC2I CCSGG 1 cut(s) 163
AsuHPI GGTGA 3 cut(s) 142, 256, 382
AsuNHI GCTAGC 1 cut(s) 320
AvaII GGWCC 1 cut(s) 740
BaeI ACNNNNGTAYC 2 cut(s) 268, 301
BanI GGYRCC 1 cut(s) 679
BanII GRGCYC 1 cut(s) 1064
BbsI GAAGAC 1 cut(s) 1091
BbvI GCAGC 1 cut(s) 564
BccI CCATC 6 cut(s) 8, 640, 832, 886, 947, 974
BceAI ACGGC 2 cut(s) 32, 168
BcgI CGANNNNNNTGC 4 cut(s) 581, 591, 615, 625
BciT130I CCWGG 1 cut(s) 59
BclI TGATCA 1 cut(s) 132
BcnI CCSGG 1 cut(s) 163
BcoDI GTCTC 1 cut(s) 66
BfaI CTAG 2 cut(s) 321, 669
BfmI CTRYAG 2 cut(s) 280, 1053
BfoI RGCGCY 1 cut(s) 327
BfuAI ACCTGC 2 cut(s) 593, 652
BisI GCNGC 3 cut(s) 6, 45, 578
BlsI GCNGC 3 cut(s) 7, 46, 579
Bme1390I CCNGG 2 cut(s) 59, 163
Bme18I GGWCC 1 cut(s) 740
BmgT120I GGNCC 5 cut(s) 269, 740, 813, 821, 1008
BmiI GGNNCC 4 cut(s) 681, 741, 969, 1010
BmrFI CCNGG 2 cut(s) 59, 163
BmrI ACTGGG 1 cut(s) 746
BmsI GCATC 2 cut(s) 282, 589
BmtI GCTAGC 1 cut(s) 324
BmuI ACTGGG 1 cut(s) 746
BpiI GAAGAC 1 cut(s) 1091
Bpu10I CCTNAGC 1 cut(s) 1032
BpuMI CCSGG 1 cut(s) 163
Bsa29I ATCGAT 1 cut(s) 597
BsaJI CCNNGG 4 cut(s) 272, 743, 804, 1012
BsaWI WCCGGW 1 cut(s) 127
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 689, 810, 830, 1103
Bse118I RCCGGY 2 cut(s) 127, 513
Bse1I ACTGG 3 cut(s) 705, 741, 816
Bse3DI GCAATG 2 cut(s) 403, 430
BseBI CCWGG 1 cut(s) 59
BseCI ATCGAT 1 cut(s) 597
BseDI CCNNGG 4 cut(s) 272, 743, 804, 1012
BseGI GGATG 1 cut(s) 622
BseLI CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 689, 810, 830, 1103
BseMI GCAATG 2 cut(s) 403, 430
BseMII CTCAG 2 cut(s) 371, 837
BseNI ACTGG 3 cut(s) 705, 741, 816
BseRI GAGGAG 4 cut(s) 215, 218, 926, 1085
BseX3I CGGCCG 1 cut(s) 45
BseXI GCAGC 1 cut(s) 564
BseYI CCCAGC 1 cut(s) 580
BsgI GTGCAG 2 cut(s) 329, 740
Bsh1285I CGRYCG 1 cut(s) 48
BshFI GGCC 6 cut(s) 47, 270, 590, 815, 823, 1009
BshNI GGYRCC 1 cut(s) 679
BshTI ACCGGT 1 cut(s) 127
BshVI ATCGAT 1 cut(s) 597
BsiEI CGRYCG 1 cut(s) 48
BsiSI CCGG 7 cut(s) 128, 162, 332, 514, 552, 614, 683
BslFI GGGAC 2 cut(s) 31, 37
BslI CCNNNNNNNGG 8 cut(s) 64, 168, 202, 232, 689, 810, 830, 1103
BsmAI GTCTC 1 cut(s) 66
BsmFI GGGAC 2 cut(s) 31, 37
BsmI GAATGC 1 cut(s) 46
BsnI GGCC 6 cut(s) 47, 270, 590, 815, 823, 1009
Bsp1286I GDGCHC 1 cut(s) 1064
Bsp143I GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
BspACI CCGC 8 cut(s) 5, 44, 69, 172, 368, 466, 517, 725
BspANI GGCC 6 cut(s) 47, 270, 590, 815, 823, 1009
BspCNI CTCAG 2 cut(s) 372, 838
BspDI ATCGAT 1 cut(s) 597
BspHI TCATGA 1 cut(s) 907
BspLI GGNNCC 4 cut(s) 681, 741, 969, 1010
BspMI ACCTGC 2 cut(s) 593, 652
BspOI GCTAGC 1 cut(s) 324
BspPI GGATC 3 cut(s) 187, 221, 493
BspT107I GGYRCC 1 cut(s) 679
BsrDI GCAATG 2 cut(s) 403, 430
BsrFI RCCGGY 2 cut(s) 127, 513
BsrI ACTGG 3 cut(s) 705, 741, 816
BssAI RCCGGY 2 cut(s) 127, 513
BssECI CCNNGG 4 cut(s) 272, 743, 804, 1012
BssMI GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
BssT1I CCWWGG 2 cut(s) 272, 804
Bst2UI CCWGG 1 cut(s) 59
Bst4CI ACNGT 3 cut(s) 284, 350, 787
BstC8I GCNNGC 7 cut(s) 322, 515, 575, 709, 723, 948, 1038
BstDEI CTNAG 4 cut(s) 380, 846, 958, 1032
BstDSI CCRYGG 1 cut(s) 1012
BstF5I GGATG 1 cut(s) 622
BstH2I RGCGCY 1 cut(s) 327
BstHHI GCGC 2 cut(s) 326, 396
BstKTI GATC 8 cut(s) 109, 135, 159, 195, 216, 403, 501, 597
BstMAI GTCTC 1 cut(s) 66
BstMBI GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
BstMCI CGRYCG 1 cut(s) 48
BstMWI GCNNNNNNNGC 3 cut(s) 570, 713, 722
BstNI CCWGG 1 cut(s) 59
BstSCI CCNGG 2 cut(s) 57, 161
BstSFI CTRYAG 2 cut(s) 280, 1053
BstV1I GCAGC 1 cut(s) 564
BstV2I GAAGAC 1 cut(s) 1091
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
BstZI CGGCCG 1 cut(s) 45
Bsu15I ATCGAT 1 cut(s) 597
BsuRI GGCC 6 cut(s) 47, 270, 590, 815, 823, 1009
BsuTUI ATCGAT 1 cut(s) 597
BtgI CCRYGG 1 cut(s) 1012
BtsCI GGATG 1 cut(s) 622
BtsIMutI CAGTG 2 cut(s) 346, 823
BveI ACCTGC 2 cut(s) 593, 652
Cac8I GCNNGC 7 cut(s) 322, 515, 575, 709, 723, 948, 1038
CaiI CAGNNNCTG 1 cut(s) 644
CciI TCATGA 1 cut(s) 907
CfoI GCGC 2 cut(s) 326, 396
Cfr10I RCCGGY 2 cut(s) 127, 513
Cfr13I GGNCC 5 cut(s) 269, 740, 813, 821, 1008
ClaI ATCGAT 1 cut(s) 597
Csp6I GTAC 2 cut(s) 188, 277
CspAI ACCGGT 1 cut(s) 127
CviAII CATG 6 cut(s) 391, 503, 548, 712, 908, 940
CviQI GTAC 2 cut(s) 188, 277
DdeI CTNAG 4 cut(s) 380, 846, 958, 1032
DpnI GATC 8 cut(s) 108, 134, 158, 194, 215, 402, 500, 596
DpnII GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
DrdI GACNNNNNNGTC 1 cut(s) 790
DseDI GACNNNNNNGTC 1 cut(s) 790
EaeI YGGCCR 1 cut(s) 45
EagI CGGCCG 1 cut(s) 45
EciI GGCGGA 2 cut(s) 84, 740
EclXI CGGCCG 1 cut(s) 45
Eco130I CCWWGG 2 cut(s) 272, 804
Eco24I GRGCYC 1 cut(s) 1064
Eco47I GGWCC 1 cut(s) 740
Eco47III AGCGCT 1 cut(s) 325
Eco52I CGGCCG 1 cut(s) 45
EcoO109I RGGNCCY 2 cut(s) 269, 1008
EcoRII CCWGG 1 cut(s) 57
EcoT14I CCWWGG 2 cut(s) 272, 804
EcoT38I GRGCYC 1 cut(s) 1064
ErhI CCWWGG 2 cut(s) 272, 804
FaeI CATG 6 cut(s) 394, 506, 551, 715, 911, 943
FaiI YATR 9 cut(s) 169, 392, 504, 549, 713, 771, 909, 941, 1020
FaqI GGGAC 2 cut(s) 31, 37
FatI CATG 6 cut(s) 390, 502, 547, 711, 907, 939
FauI CCCGC 1 cut(s) 510
FbaI TGATCA 1 cut(s) 132
FblI GTMKAC 1 cut(s) 149
Fnu4HI GCNGC 3 cut(s) 6, 45, 578
FokI GGATG 1 cut(s) 629
FriOI GRGCYC 1 cut(s) 1064
Fsp4HI GCNGC 3 cut(s) 6, 45, 578
FspBI CTAG 2 cut(s) 321, 669
FspI TGCGCA 1 cut(s) 395
GlaI GCGC 2 cut(s) 325, 395
GluI GCNGC 3 cut(s) 6, 45, 578
GsaI CCCAGC 1 cut(s) 584
HaeII RGCGCY 1 cut(s) 327
HaeIII GGCC 6 cut(s) 47, 270, 590, 815, 823, 1009
HapII CCGG 7 cut(s) 128, 162, 332, 514, 552, 614, 683
HhaI GCGC 2 cut(s) 326, 396
Hin1II CATG 6 cut(s) 394, 506, 551, 715, 911, 943
Hin6I GCGC 2 cut(s) 324, 394
HinP1I GCGC 2 cut(s) 324, 394
HincII GTYRAC 4 cut(s) 150, 451, 783, 801
HindII GTYRAC 4 cut(s) 150, 451, 783, 801
HindIII AAGCTT 1 cut(s) 944
HinfI GANTC 5 cut(s) 25, 337, 489, 791, 988
HpaII CCGG 7 cut(s) 128, 162, 332, 514, 552, 614, 683
HphI GGTGA 3 cut(s) 142, 256, 382
Hpy166II GTNNAC 5 cut(s) 150, 451, 698, 783, 801
Hpy188I TCNGA 5 cut(s) 381, 417, 744, 847, 993
Hpy188III TCNNGA 2 cut(s) 764, 908
Hpy8I GTNNAC 5 cut(s) 150, 451, 698, 783, 801
Hpy99I CGWCG 4 cut(s) 154, 317, 757, 903
HpyAV CCTTC 5 cut(s) 178, 367, 466, 646, 994
HpyCH4III ACNGT 3 cut(s) 284, 350, 787
HpyCH4IV ACGT 1 cut(s) 507
HpyCH4V TGCA 4 cut(s) 346, 602, 707, 721
HpyF10VI GCNNNNNNNGC 3 cut(s) 570, 713, 722
HpyF3I CTNAG 4 cut(s) 380, 846, 958, 1032
HpySE526I ACGT 1 cut(s) 507
Hsp92II CATG 6 cut(s) 394, 506, 551, 715, 911, 943
HspAI GCGC 2 cut(s) 324, 394
KroI GCCGGC 1 cut(s) 513
KroNI GCCGGC 1 cut(s) 515
Ksp22I TGATCA 1 cut(s) 132
Kzo9I GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
LmnI GCTCC 1 cut(s) 1045
Lsp1109I GCAGC 1 cut(s) 564
LweI GCATC 2 cut(s) 282, 589
MaeI CTAG 2 cut(s) 321, 669
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 2 cut(s) 284, 973
MalI GATC 8 cut(s) 108, 134, 158, 194, 215, 402, 500, 596
MboI GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
MboII GAAGA 5 cut(s) 208, 997, 1006, 1009, 1096
MflI RGATCY 1 cut(s) 213
MhlI GDGCHC 1 cut(s) 1064
MluCI AATT 2 cut(s) 227, 773
MlyI GAGTC 2 cut(s) 19, 800
MmeI TCCRAC 1 cut(s) 670
MreI CGCCGGCG 1 cut(s) 513
MroNI GCCGGC 1 cut(s) 513
MseI TTAA 5 cut(s) 77, 117, 410, 528, 732
MslI CAYNNNNRTG 1 cut(s) 716
MspI CCGG 7 cut(s) 128, 162, 332, 514, 552, 614, 683
MspR9I CCNGG 2 cut(s) 59, 163
Mva1269I GAATGC 1 cut(s) 46
MvaI CCWGG 1 cut(s) 59
MwoI GCNNNNNNNGC 3 cut(s) 570, 713, 722
NaeI GCCGGC 1 cut(s) 515
NciI CCSGG 1 cut(s) 163
NdeII GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
NgoMIV GCCGGC 1 cut(s) 513
NheI GCTAGC 1 cut(s) 320
NlaIII CATG 6 cut(s) 394, 506, 551, 715, 911, 943
NlaIV GGNNCC 4 cut(s) 681, 741, 969, 1010
NmeAIII GCCGAG 1 cut(s) 616
NsbI TGCGCA 1 cut(s) 395
PagI TCATGA 1 cut(s) 907
PaqCI CACCTGC 1 cut(s) 652
PctI GAATGC 1 cut(s) 46
PdiI GCCGGC 1 cut(s) 515
PfeI GAWTC 3 cut(s) 337, 489, 988
PflMI CCANNNNNTGG 1 cut(s) 830
PfoI TCCNGGA 1 cut(s) 161
PinAI ACCGGT 1 cut(s) 127
PkrI GCNGC 3 cut(s) 7, 46, 579
PleI GAGTC 2 cut(s) 19, 799
PpsI GAGTC 2 cut(s) 19, 799
Psp6I CCWGG 1 cut(s) 57
PspFI CCCAGC 1 cut(s) 580
PspGI CCWGG 1 cut(s) 57
PspN4I GGNNCC 4 cut(s) 681, 741, 969, 1010
PspPI GGNCC 5 cut(s) 269, 740, 813, 821, 1008
PstNI CAGNNNCTG 1 cut(s) 644
PsuI RGATCY 1 cut(s) 213
RsaI GTAC 2 cut(s) 189, 278
RsaNI GTAC 2 cut(s) 188, 277
RseI CAYNNNNRTG 1 cut(s) 716
SalI GTCGAC 1 cut(s) 148
SaqAI TTAA 5 cut(s) 77, 117, 410, 528, 732
SatI GCNGC 3 cut(s) 6, 45, 578
Sau3AI GATC 8 cut(s) 106, 132, 156, 192, 213, 400, 498, 594
Sau96I GGNCC 5 cut(s) 269, 740, 813, 821, 1008
SchI GAGTC 2 cut(s) 19, 800
ScrFI CCNGG 2 cut(s) 59, 163
SduI GDGCHC 1 cut(s) 1064
SfaNI GCATC 2 cut(s) 282, 589
SfcI CTRYAG 2 cut(s) 280, 1053
SgrAI CRCCGGYG 1 cut(s) 513
SinI GGWCC 1 cut(s) 740
SmiMI CAYNNNNRTG 1 cut(s) 716
Sse9I AATT 2 cut(s) 227, 773
SsiI CCGC 8 cut(s) 5, 44, 69, 172, 368, 466, 517, 725
SspMI CTAG 2 cut(s) 321, 669
StyD4I CCNGG 2 cut(s) 57, 161
StyI CCWWGG 2 cut(s) 272, 804
TaaI ACNGT 3 cut(s) 284, 350, 787
TaiI ACGT 1 cut(s) 510
TaqI TCGA 7 cut(s) 38, 149, 290, 597, 635, 752, 924
TaqII GACCGA 1 cut(s) 267
TasI AATT 2 cut(s) 227, 773
TauI GCSGC 2 cut(s) 8, 47
TfiI GAWTC 3 cut(s) 337, 489, 988
Tru1I TTAA 5 cut(s) 77, 117, 410, 528, 732
Tru9I TTAA 5 cut(s) 77, 117, 410, 528, 732
TscAI CASTG 2 cut(s) 353, 823
TseI GCWGC 1 cut(s) 577
TspDTI ATGAA 4 cut(s) 786, 855, 896, 956
TspGWI ACGGA 3 cut(s) 185, 279, 945
TspRI CASTG 2 cut(s) 353, 823
Van91I CCANNNNNTGG 1 cut(s) 830
VpaK11BI GGWCC 1 cut(s) 740
XmiI GTMKAC 1 cut(s) 149
XspI CTAG 2 cut(s) 321, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.