Rmu_sc0004556.1_g000006

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004556.1
OG0000123
Physical Location & Seq
Reverse (-)
30355 .. 31626
1272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004556.1_g000006.1.cds

Sequence Viewer

Length: 1179 bp
atgatggcggaggagagagcaatggctcctcctacactatcagaggaggctattgtgagccttgttggaggagaagattttatccatgattcgttcttctacctatgtggctggcttttgtctaagaaggtggtggtgattccgtcgttctcagcggcgatctcgaacgtttggggtttaaaggagagagtcttgatcctgcaagaggaggatgacatctttgtcttccaattcaaggagcaggaggtgaagaatcgggtccttactgggggtccatggttttacaataactccatgttgctgctagccgattatgatggcatctctgatcttgatgcagcaccgttgcacctccttgaggtttgggtggcggtgaagggtttacgcattgctatgcgtaatgagaaagccttaacactaatcggacaagcgttgggagatgttgttcgagttaatcagggcgtggtgcagtggaaagacttggtcccgctgattcggtggcatggcctttgtggggcatgtgggttcttcgggcatggtggtgggctctgtgacaagcggctggaggcggaggtgacatcgttggagacaccgggccgagatgcagtgggctgtggtttggggctggaaactatacctagaatgcaggttgctgtggcgacggtcatggagaccgagatagggccagcgagaggtggtctatcggaggcggctgacatggctttggtggtggtggatgagtcgacgtcggctactgcaggggttgcaacgatggctgttccgaaaaaggcgggaaaccctaatttcaaattagggttgaccgcaggactgactgggctgccatctgggcagggctgcatgttaaacaaggaagggtctgctgggctttctactaggcctggatctgttggaaaatggtcaaagttgactttgggttctgaaaaaggcctaaagttggctttgggagtgaataagaagagcttcaagcctagtttggaaattatacctcaggaatttcaacttggcgagttggtggaggtcccgatctcgatagagccagcaccaaagaagaggggtcgtccttctagacgccgaattaaaactcctgaagcaaaaggtaatactgcaagtgtgggattaagctccaactcggatgggaatgagctgtttattgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

392

Amino Acids

41.9

Weight (kDa)

5.96

Isoelectric Point (pI)

37.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 221
AatII GACGTC 1 cut(s) 749
Acc36I ACCTGC 1 cut(s) 637
AccI GTMKAC 1 cut(s) 743
AciI CCGC 9 cut(s) 8, 155, 371, 488, 559, 569, 710, 791, 822
AclI AACGTT 1 cut(s) 168
AclWI GGATC 2 cut(s) 190, 910
AcsI RAATTY 1 cut(s) 1013
AcuI CTGAAG 1 cut(s) 1128
AcyI GRCGYC 2 cut(s) 746, 1090
AfiI CCNNNNNNNGG 8 cut(s) 205, 235, 268, 358, 514, 681, 692, 955
AgsI TTSAA 4 cut(s) 235, 808, 985, 1019
AjnI CCWGG 1 cut(s) 898
AjuI GAANNNNNNNTTGG 2 cut(s) 1005, 1037
AloI GAACNNNNNNTCC 2 cut(s) 429, 461
AluBI AGCT 3 cut(s) 981, 1143, 1165
AluI AGCT 3 cut(s) 981, 1143, 1165
Alw26I GTCTC 2 cut(s) 581, 665
AlwI GGATC 2 cut(s) 190, 910
AoxI GGCC 5 cut(s) 505, 595, 683, 896, 946
ApeKI GCWGC 4 cut(s) 301, 338, 838, 855
ApoI RAATTY 1 cut(s) 1013
Asp700I GAANNNNTTC 1 cut(s) 980
AspS9I GGNCC 6 cut(s) 259, 272, 484, 595, 683, 1039
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 4 cut(s) 148, 259, 385, 586
AsuNHI GCTAGC 1 cut(s) 304
AvaII GGWCC 4 cut(s) 259, 272, 484, 1039
AxyI CCTNAGG 1 cut(s) 1008
BanII GRGCYC 1 cut(s) 549
BbsI GAAGAC 1 cut(s) 217
BbvI GCAGC 4 cut(s) 288, 350, 825, 842
BccI CCATC 4 cut(s) 311, 766, 850, 1148
BciT130I CCWGG 1 cut(s) 900
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 2 cut(s) 581, 665
BfaI CTAG 5 cut(s) 305, 639, 894, 990, 1086
BfmI CTRYAG 1 cut(s) 756
BfuAI ACCTGC 1 cut(s) 637
BglI GCCNNNNNGGC 1 cut(s) 847
BisI GCNGC 7 cut(s) 156, 302, 339, 560, 711, 839, 856
BlsI GCNGC 7 cut(s) 157, 303, 340, 561, 712, 840, 857
Bme1390I CCNGG 2 cut(s) 594, 900
Bme18I GGWCC 4 cut(s) 259, 272, 484, 1039
BmgT120I GGNCC 6 cut(s) 259, 272, 484, 595, 683, 1039
BmiI GGNNCC 5 cut(s) 27, 260, 273, 486, 1041
BmrFI CCNGG 2 cut(s) 594, 900
BmrI ACTGGG 2 cut(s) 276, 843
BmsI GCATC 3 cut(s) 325, 330, 592
BmtI GCTAGC 1 cut(s) 308
BmuI ACTGGG 2 cut(s) 276, 843
BpiI GAAGAC 1 cut(s) 217
BpmI CTGGAG 1 cut(s) 584
BpuEI CTTGAG 1 cut(s) 377
BpuMI CCSGG 1 cut(s) 594
BsaHI GRCGYC 2 cut(s) 746, 1090
BsaI GGTCTC 1 cut(s) 665
BsaJI CCNNGG 1 cut(s) 275
BsaXI ACNNNNNCTCC 4 cut(s) 275, 305, 429, 459
Bsc4I CCNNNNNNNGG 8 cut(s) 205, 235, 268, 358, 514, 681, 692, 955
Bse1I ACTGG 2 cut(s) 271, 838
Bse21I CCTNAGG 1 cut(s) 1008
Bse3DI GCAATG 2 cut(s) 27, 387
BseBI CCWGG 1 cut(s) 900
BseDI CCNNGG 1 cut(s) 275
BseGI GGATG 3 cut(s) 217, 742, 1159
BseLI CCNNNNNNNGG 8 cut(s) 205, 235, 268, 358, 514, 681, 692, 955
BseMI GCAATG 2 cut(s) 27, 387
BseMII CTCAG 2 cut(s) 165, 1022
BseNI ACTGG 2 cut(s) 271, 838
BseRI GAGGAG 5 cut(s) 18, 26, 59, 84, 221
BseXI GCAGC 4 cut(s) 288, 350, 825, 842
BseYI CCCAGC 1 cut(s) 881
BsgI GTGCAG 1 cut(s) 488
BshFI GGCC 5 cut(s) 507, 597, 685, 898, 948
BsiSI CCGG 1 cut(s) 593
BslFI GGGAC 2 cut(s) 470, 1025
BslI CCNNNNNNNGG 8 cut(s) 205, 235, 268, 358, 514, 681, 692, 955
BsmAI GTCTC 2 cut(s) 581, 665
BsmFI GGGAC 2 cut(s) 470, 1025
BsmI GAATGC 1 cut(s) 648
BsnI GGCC 5 cut(s) 507, 597, 685, 898, 948
Bso31I GGTCTC 1 cut(s) 665
Bsp1286I GDGCHC 1 cut(s) 549
Bsp143I GATC 5 cut(s) 159, 195, 328, 902, 1044
Bsp19I CCATGG 1 cut(s) 275
BspACI CCGC 9 cut(s) 8, 155, 371, 488, 559, 569, 710, 791, 822
BspANI GGCC 5 cut(s) 507, 597, 685, 898, 948
BspCNI CTCAG 2 cut(s) 164, 1021
BspLI GGNNCC 5 cut(s) 27, 260, 273, 486, 1041
BspMAI CTGCAG 1 cut(s) 760
BspMI ACCTGC 1 cut(s) 637
BspOI GCTAGC 1 cut(s) 308
BspPI GGATC 2 cut(s) 190, 910
BspQI GCTCTTC 1 cut(s) 971
BspTNI GGTCTC 1 cut(s) 665
BsrDI GCAATG 2 cut(s) 27, 387
BsrI ACTGG 2 cut(s) 271, 838
BssECI CCNNGG 1 cut(s) 275
BssMI GATC 5 cut(s) 159, 195, 328, 902, 1044
BssNI GRCGYC 2 cut(s) 746, 1090
BssT1I CCWWGG 1 cut(s) 275
Bst2UI CCWGG 1 cut(s) 900
Bst4CI ACNGT 2 cut(s) 345, 664
Bst6I CTCTTC 2 cut(s) 971, 1064
BstACI GRCGYC 2 cut(s) 746, 1090
BstAPI GCANNNNNTGC 1 cut(s) 764
BstC8I GCNNGC 4 cut(s) 113, 306, 687, 1059
BstDEI CTNAG 3 cut(s) 123, 151, 1008
BstDSI CCRYGG 1 cut(s) 275
BstENI CCTNNNNNAGG 2 cut(s) 203, 356
BstF5I GGATG 3 cut(s) 217, 742, 1159
BstKTI GATC 5 cut(s) 162, 198, 331, 905, 1047
BstMAI GTCTC 2 cut(s) 581, 665
BstMBI GATC 5 cut(s) 159, 195, 328, 902, 1044
BstMWI GCNNNNNNNGC 4 cut(s) 719, 764, 773, 847
BstNI CCWGG 1 cut(s) 900
BstNSI RCATGY 2 cut(s) 522, 862
BstSCI CCNGG 2 cut(s) 592, 898
BstSFI CTRYAG 1 cut(s) 756
BstV1I GCAGC 4 cut(s) 288, 350, 825, 842
BstV2I GAAGAC 1 cut(s) 217
BstX2I RGATCY 1 cut(s) 902
BstYI RGATCY 1 cut(s) 902
Bsu36I CCTNAGG 1 cut(s) 1008
BsuRI GGCC 5 cut(s) 507, 597, 685, 898, 948
BtgI CCRYGG 1 cut(s) 275
BtsCI GGATG 3 cut(s) 217, 742, 1159
BtsI GCAGTG 2 cut(s) 476, 612
BtsIMutI CAGTG 2 cut(s) 476, 612
BveI ACCTGC 1 cut(s) 637
Cac8I GCNNGC 4 cut(s) 113, 306, 687, 1059
Cfr13I GGNCC 6 cut(s) 259, 272, 484, 595, 683, 1039
CseI GACGC 1 cut(s) 1098
CviAII CATG 9 cut(s) 86, 276, 295, 503, 519, 536, 667, 718, 859
DdeI CTNAG 3 cut(s) 123, 151, 1008
DpnI GATC 5 cut(s) 161, 197, 330, 904, 1046
DpnII GATC 5 cut(s) 159, 195, 328, 902, 1044
DraI TTTAAA 1 cut(s) 180
DrdI GACNNNNNNGTC 1 cut(s) 221
DseDI GACNNNNNNGTC 1 cut(s) 221
Eam1104I CTCTTC 2 cut(s) 971, 1064
EarI CTCTTC 2 cut(s) 971, 1064
EciI GGCGGA 2 cut(s) 23, 584
Eco130I CCWWGG 1 cut(s) 275
Eco147I AGGCCT 2 cut(s) 898, 948
Eco24I GRGCYC 1 cut(s) 549
Eco31I GGTCTC 1 cut(s) 665
Eco47I GGWCC 4 cut(s) 259, 272, 484, 1039
Eco57I CTGAAG 1 cut(s) 1128
Eco81I CCTNAGG 1 cut(s) 1008
EcoNI CCTNNNNNAGG 2 cut(s) 203, 356
EcoO109I RGGNCCY 2 cut(s) 259, 1039
EcoRII CCWGG 1 cut(s) 898
EcoT14I CCWWGG 1 cut(s) 275
EcoT38I GRGCYC 1 cut(s) 549
ErhI CCWWGG 1 cut(s) 275
FaeI CATG 9 cut(s) 89, 279, 298, 506, 522, 539, 670, 721, 862
FalI AAGNNNNNCTT 2 cut(s) 965, 997
FaqI GGGAC 2 cut(s) 470, 1025
FatI CATG 9 cut(s) 85, 275, 294, 502, 518, 535, 666, 717, 858
FauI CCCGC 2 cut(s) 495, 784
FblI GTMKAC 1 cut(s) 743
Fnu4HI GCNGC 7 cut(s) 156, 302, 339, 560, 711, 839, 856
FokI GGATG 3 cut(s) 224, 749, 1166
FriOI GRGCYC 1 cut(s) 549
Fsp4HI GCNGC 7 cut(s) 156, 302, 339, 560, 711, 839, 856
FspBI CTAG 5 cut(s) 305, 639, 894, 990, 1086
GluI GCNGC 7 cut(s) 156, 302, 339, 560, 711, 839, 856
GsaI CCCAGC 1 cut(s) 885
GsuI CTGGAG 1 cut(s) 584
HaeIII GGCC 5 cut(s) 507, 597, 685, 898, 948
HapII CCGG 1 cut(s) 593
HgaI GACGC 1 cut(s) 1098
Hin1I GRCGYC 2 cut(s) 746, 1090
Hin1II CATG 9 cut(s) 89, 279, 298, 506, 522, 539, 670, 721, 862
HincII GTYRAC 3 cut(s) 744, 819, 927
HindII GTYRAC 3 cut(s) 744, 819, 927
HinfI GANTC 6 cut(s) 89, 139, 189, 253, 493, 740
HpaII CCGG 1 cut(s) 593
HphI GGTGA 4 cut(s) 148, 259, 385, 586
Hpy166II GTNNAC 4 cut(s) 383, 744, 819, 927
Hpy188I TCNGA 7 cut(s) 43, 328, 425, 706, 783, 940, 1153
Hpy188III TCNNGA 8 cut(s) 163, 193, 332, 1010, 1042, 1048, 1086, 1106
Hpy8I GTNNAC 4 cut(s) 383, 744, 819, 927
Hpy99I CGWCG 4 cut(s) 148, 664, 748, 751
HpyAV CCTTC 4 cut(s) 121, 370, 866, 1092
HpyCH4III ACNGT 2 cut(s) 345, 664
HpyCH4IV ACGT 2 cut(s) 168, 746
HpyF10VI GCNNNNNNNGC 4 cut(s) 719, 764, 773, 847
HpyF3I CTNAG 3 cut(s) 123, 151, 1008
HpySE526I ACGT 2 cut(s) 168, 746
Hsp92I GRCGYC 2 cut(s) 746, 1090
Hsp92II CATG 9 cut(s) 89, 279, 298, 506, 522, 539, 670, 721, 862
Kzo9I GATC 5 cut(s) 159, 195, 328, 902, 1044
LguI GCTCTTC 1 cut(s) 971
LmnI GCTCC 3 cut(s) 31, 238, 1148
Lsp1109I GCAGC 4 cut(s) 288, 350, 825, 842
LweI GCATC 3 cut(s) 325, 330, 592
MaeI CTAG 5 cut(s) 305, 639, 894, 990, 1086
MaeII ACGT 2 cut(s) 168, 746
MaeIII GTNAC 2 cut(s) 551, 574
MalI GATC 5 cut(s) 161, 197, 330, 904, 1046
MboI GATC 5 cut(s) 159, 195, 328, 902, 1044
MboII GAAGA 7 cut(s) 86, 88, 217, 262, 520, 988, 1081
MflI RGATCY 1 cut(s) 902
MhlI GDGCHC 1 cut(s) 549
MluCI AATT 6 cut(s) 230, 802, 809, 999, 1013, 1095
MlyI GAGTC 2 cut(s) 198, 749
MmeI TCCRAC 4 cut(s) 46, 564, 889, 1170
MroXI GAANNNNTTC 1 cut(s) 980
MseI TTAA 6 cut(s) 179, 413, 453, 863, 1098, 1139
MslI CAYNNNNRTG 2 cut(s) 392, 540
MspA1I CMGCKG 2 cut(s) 155, 490
MspI CCGG 1 cut(s) 593
MspR9I CCNGG 2 cut(s) 594, 900
Mva1269I GAATGC 1 cut(s) 648
MvaI CCWGG 1 cut(s) 900
MwoI GCNNNNNNNGC 4 cut(s) 719, 764, 773, 847
NciI CCSGG 1 cut(s) 594
NcoI CCATGG 1 cut(s) 275
NdeII GATC 5 cut(s) 159, 195, 328, 902, 1044
NheI GCTAGC 1 cut(s) 304
NlaIII CATG 9 cut(s) 89, 279, 298, 506, 522, 539, 670, 721, 862
NlaIV GGNNCC 5 cut(s) 27, 260, 273, 486, 1041
NmeAIII GCCGAG 1 cut(s) 623
NmuCI GTSAC 2 cut(s) 551, 574
NspI RCATGY 2 cut(s) 522, 862
PceI AGGCCT 2 cut(s) 898, 948
PciSI GCTCTTC 1 cut(s) 971
PctI GAATGC 1 cut(s) 648
PdmI GAANNNNTTC 1 cut(s) 980
PfeI GAWTC 4 cut(s) 89, 139, 253, 493
PflFI GACNNNGTC 1 cut(s) 482
PkrI GCNGC 7 cut(s) 157, 303, 340, 561, 712, 840, 857
PleI GAGTC 2 cut(s) 197, 748
PpsI GAGTC 2 cut(s) 197, 748
PpuMI RGGWCCY 2 cut(s) 259, 1039
Psp1406I AACGTT 1 cut(s) 168
Psp5II RGGWCCY 2 cut(s) 259, 1039
Psp6I CCWGG 1 cut(s) 898
PspFI CCCAGC 1 cut(s) 881
PspGI CCWGG 1 cut(s) 898
PspN4I GGNNCC 5 cut(s) 27, 260, 273, 486, 1041
PspPI GGNCC 6 cut(s) 259, 272, 484, 595, 683, 1039
PspPPI RGGWCCY 2 cut(s) 259, 1039
PstI CTGCAG 1 cut(s) 760
PsuI RGATCY 1 cut(s) 902
PsyI GACNNNGTC 1 cut(s) 482
RseI CAYNNNNRTG 2 cut(s) 392, 540
SalI GTCGAC 1 cut(s) 742
SapI GCTCTTC 1 cut(s) 971
SaqAI TTAA 6 cut(s) 179, 413, 453, 863, 1098, 1139
SatI GCNGC 7 cut(s) 156, 302, 339, 560, 711, 839, 856
Sau3AI GATC 5 cut(s) 159, 195, 328, 902, 1044
Sau96I GGNCC 6 cut(s) 259, 272, 484, 595, 683, 1039
SchI GAGTC 2 cut(s) 198, 749
ScrFI CCNGG 2 cut(s) 594, 900
SduI GDGCHC 1 cut(s) 549
SfaNI GCATC 3 cut(s) 325, 330, 592
SfcI CTRYAG 1 cut(s) 756
SinI GGWCC 4 cut(s) 259, 272, 484, 1039
SmiMI CAYNNNNRTG 2 cut(s) 392, 540
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
Sse9I AATT 6 cut(s) 230, 802, 809, 999, 1013, 1095
SseBI AGGCCT 2 cut(s) 898, 948
SsiI CCGC 9 cut(s) 8, 155, 371, 488, 559, 569, 710, 791, 822
SspMI CTAG 5 cut(s) 305, 639, 894, 990, 1086
StuI AGGCCT 2 cut(s) 898, 948
StyD4I CCNGG 2 cut(s) 592, 898
StyI CCWWGG 1 cut(s) 275
TaaI ACNGT 2 cut(s) 345, 664
TaiI ACGT 2 cut(s) 171, 749
TaqI TCGA 4 cut(s) 164, 448, 743, 1049
TaqII GACCGA 1 cut(s) 689
TasI AATT 6 cut(s) 230, 802, 809, 999, 1013, 1095
TauI GCSGC 3 cut(s) 158, 562, 713
TfiI GAWTC 4 cut(s) 89, 139, 253, 493
Tru1I TTAA 6 cut(s) 179, 413, 453, 863, 1098, 1139
Tru9I TTAA 6 cut(s) 179, 413, 453, 863, 1098, 1139
TscAI CASTG 2 cut(s) 476, 612
TseFI GTSAC 2 cut(s) 551, 574
TseI GCWGC 4 cut(s) 301, 338, 838, 855
Tsp45I GTSAC 2 cut(s) 551, 574
TspGWI ACGGA 1 cut(s) 132
TspRI CASTG 2 cut(s) 476, 612
Tth111I GACNNNGTC 1 cut(s) 482
VpaK11BI GGWCC 4 cut(s) 259, 272, 484, 1039
XagI CCTNNNNNAGG 2 cut(s) 203, 356
XapI RAATTY 1 cut(s) 1013
XbaI TCTAGA 1 cut(s) 1085
XceI RCATGY 2 cut(s) 522, 862
XmiI GTMKAC 1 cut(s) 743
XmnI GAANNNNTTC 1 cut(s) 980
XspI CTAG 5 cut(s) 305, 639, 894, 990, 1086
ZraI GACGTC 1 cut(s) 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.