Rmu_sc0001673.1_g000030

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001673.1
OG0000123
Physical Location & Seq
Forward (+)
150337 .. 151149
813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001673.1_g000030.1.cds

Sequence Viewer

Length: 753 bp
atgcttctgttggcggactacaacagtgttggtttgttggttgagatcccgctgcactccctcgatgtatgggtcgtggtgaagggcctgcgcatttctatgcacaacgtgcgagctctgacccgtattgggaatgtgctgggaagctttgttagggtcgatttggtggcgctgcagaggaaagacgttgttcaacgtataaggctgattcacgatgtgaggcggcgggtttgggctcggagggaggtccggttctcgtcggatctgtctgtggagctggagtttcattatgagaggtgccatggtatttgcagggcctgtggttacttctaccatggtagggcagaatgtgacaagggattgttgtcaacggtggttgatgcaccggtgcaggtggactcggatgtgggaaccagtttgccggtgggttcggtggtggtagaggcgtctggggtcttgccggatgaagatgggctgcttgtagtggttaggcagcgtggaacggaggcggcaaaccctaattttgaattagggttgaccgatgggtcgggtttgaccaatgtcggggttagtggactggctgttgggccatttgggcctgaaggtgggggctatttttcatttggacacccatctaaggttttgggtgtgcgacggctcctcgaggaggattgggttgaggatgggaaacgtctgaagcttgttgatggcttgattgaggtcctggggaaggttcccaagaaaaagggctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

250

Amino Acids

27.33

Weight (kDa)

7.06

Isoelectric Point (pI)

37.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000123)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38140
fragaria_vesca FvH4_1g20041 FvH4_1g21262 FvH4_1g25072 FvH4_2g16250 FvH4_2g17190 FvH4_3g04330 FvH4_3g20250 FvH4_3g22272 FvH4_3g26421 FvH4_3g35981 FvH4_4g01621 FvH4_4g07081 FvH4_4g13902 FvH4_4g18461 FvH4_5g15851 FvH4_6g06531 FvH4_6g22500 FvH4_6g23161 FvH4_6g26861 FvH4_6g28682 FvH4_6g33163 FvH4_6g33591 FvH4_6g38140 FvH4_7g00272
malus_domestica MD05G1145500.v1.1 MD10G1144900.v1.1
prunus_persica Prupe.8G183300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0109311 RchiOBHm_Chr2g0109451 RchiOBHm_Chr2g0164071 RchiOBHm_Chr3g0469891 RchiOBHm_Chr3g0477271 RchiOBHm_Chr6g0281681
rosa_laevigata RLG00000007350 RLG00000011905 RLG00000012951 RLG00000030154
rosa_multiflora Rmu_co8029630.1_g000001 Rmu_co8038194.1_g000001 Rmu_co8114330.1_g000001 Rmu_co8138832.1_g000001 Rmu_co8166524.1_g000001 Rmu_co8169592.1_g000001 Rmu_co8214120.1_g000001 Rmu_co8224140.1_g000001 Rmu_co8242461.1_g000001 Rmu_co8314423.1_g000002 Rmu_co8333117.1_g000001 Rmu_co8348539.1_g000002 Rmu_co8348927.1_g000001 Rmu_co8416111.1_g000001 Rmu_co8444475.1_g000001 Rmu_co8503525.1_g000001 Rmu_sc0000047.1_g000017 Rmu_sc0000076.1_g000047 Rmu_sc0000116.1_g000002 Rmu_sc0000146.1_g000004 Rmu_sc0000239.1_g000065 Rmu_sc0000335.1_g000105 Rmu_sc0000424.1_g000035 Rmu_sc0000517.1_g000021 Rmu_sc0000611.1_g000003 Rmu_sc0000770.1_g000050 Rmu_sc0000808.1_g000032 Rmu_sc0000811.1_g000026 Rmu_sc0000894.1_g000054 Rmu_sc0000898.1_g000082 Rmu_sc0000898.1_g000083 Rmu_sc0001350.1_g000029 Rmu_sc0001374.1_g000062 Rmu_sc0001405.1_g000018 Rmu_sc0001474.1_g000014 Rmu_sc0001526.1_g000021 Rmu_sc0001551.1_g000029 Rmu_sc0001557.1_g000004 Rmu_sc0001650.1_g000005 Rmu_sc0001650.1_g000013 Rmu_sc0001662.1_g000001 Rmu_sc0001673.1_g000030 Rmu_sc0001701.1_g000021 Rmu_sc0001814.1_g000019 Rmu_sc0002038.1_g000007 Rmu_sc0002179.1_g000011 Rmu_sc0002285.1_g000020 Rmu_sc0002575.1_g000023 Rmu_sc0002731.1_g000001 Rmu_sc0002944.1_g000021 Rmu_sc0003023.1_g000002 Rmu_sc0003129.1_g000006 Rmu_sc0003144.1_g000013 Rmu_sc0003156.1_g000010 Rmu_sc0003369.1_g000015 Rmu_sc0003410.1_g000028 Rmu_sc0003410.1_g000029 Rmu_sc0003507.1_g000033 Rmu_sc0003548.1_g000013 Rmu_sc0003605.1_g000027 Rmu_sc0003710.1_g000010 Rmu_sc0003863.1_g000009 Rmu_sc0003909.1_g000006 Rmu_sc0003916.1_g000023 Rmu_sc0003916.1_g000024 Rmu_sc0003930.1_g000009 Rmu_sc0004030.1_g000006 Rmu_sc0004046.1_g000018 Rmu_sc0004154.1_g000010 Rmu_sc0004191.1_g000011 Rmu_sc0004205.1_g000007 Rmu_sc0004556.1_g000006 Rmu_sc0004975.1_g000008 Rmu_sc0005038.1_g000028 Rmu_sc0005083.1_g000005 Rmu_sc0005220.1_g000016 Rmu_sc0005274.1_g000011 Rmu_sc0005378.1_g000023 Rmu_sc0005385.1_g000016 Rmu_sc0005424.1_g000023 Rmu_sc0005738.1_g000009 Rmu_sc0005798.1_g000015 Rmu_sc0005834.1_g000008 Rmu_sc0006128.1_g000007 Rmu_sc0006865.1_g000015 Rmu_sc0006925.1_g000001 Rmu_sc0007005.1_g000002 Rmu_sc0007025.1_g000017 Rmu_sc0007518.1_g000004 Rmu_sc0007813.1_g000002 Rmu_sc0008730.1_g000003 Rmu_sc0008861.1_g000008 Rmu_sc0008861.1_g000009 Rmu_sc0009624.1_g000009 Rmu_sc0010439.1_g000001 Rmu_sc0010719.1_g000003 Rmu_sc0011069.1_g000001 Rmu_sc0013102.1_g000007 Rmu_sc0013803.1_g000022 Rmu_sc0013860.1_g000004 Rmu_sc0014885.1_g000001 Rmu_sc0017338.1_g000001 Rmu_sc0017964.1_g000006 Rmu_sc0019100.1_g000002 Rmu_sc0020554.1_g000001 Rmu_sc0020928.1_g000001 Rmu_sc0021886.1_g000001 Rmu_sc0022276.1_g000001 Rmu_sc0022942.1_g000001 Rmu_sc0022945.1_g000001 Rmu_sc0023180.1_g000002 Rmu_sc0024149.1_g000001 Rmu_sc0024149.1_g000002 Rmu_sc0026250.1_g000001 Rmu_sc0029882.1_g000003 Rmu_sc0035589.1_g000001 Rmu_sc0035888.1_g000003 Rmu_sc0036257.1_g000001 Rmu_sc0036258.1_g000001 Rmu_sc0040283.1_g000002 Rmu_sc0042169.1_g000001 Rmu_ssc0000126.1_g000076 Rmu_ssc0000357.1_g000017 Rmu_ssc0000372.1_g000063 Rmu_ssc0000391.1_g000030 Rmu_ssc0000432.1_g000006 Rmu_ssc0000480.1_g000008
rosa_roxburghii Rroxscaffold_1G00047150 Rroxscaffold_2G00124620 Rroxscaffold_2G00130500 Rroxscaffold_2G00146610 Rroxscaffold_3G00260760 Rroxscaffold_3G00270900 Rroxscaffold_4G00282170 Rroxscaffold_6G00418750 Rroxscaffold_7G00186930
rosa_rugosa Rorug01G0267800 Rorug02G0132500 Rorug02G0156000 Rorug02G0163300 Rorug02G0282900 Rorug02G0283000 Rorug02G0439400 Rorug02G0488800 Rorug02G0488900 Rorug02G0556100 Rorug03G0101100 Rorug03G0101200 Rorug03G0130200 Rorug03G0223700 Rorug04G0015200 Rorug04G0032400 Rorug04G0043600 Rorug04G0049700 Rorug04G0137000 Rorug04G0178300 Rorug04G0198500 Rorug05G0298400 Rorug05G0438000 Rorug05G0499300 Rorug06G0025400 Rorug06G0142400 Rorug07G0108200 Rorug07G0111200
rosa_samantha Rh1CG412100 Rh2AG574700 Rh2BG495100 Rh2CG255400 Rh2CG263700 Rh2CG548300 Rh3BG288300 Rh3DG068500 Rh5CG272200 Rh5DG249700 Rh5DG397400 Rh6AG255100 Rh6BG258500 Rh6CG257300 Rh6DG249500 Rh6DG268300 Rh6DG381800 Rh7BG282800 Rh7BG372100
rosa_wichuraiana Rw4G024160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 382
AasI GACNNNNNNGTC 1 cut(s) 544
AbsI CCTCGAGG 1 cut(s) 662
Acc16I TGCGCA 1 cut(s) 92
Acc36I ACCTGC 1 cut(s) 382
AccB1I GGYRCC 1 cut(s) 297
AciI CCGC 5 cut(s) 14, 50, 223, 226, 509
AclWI GGATC 2 cut(s) 40, 270
AcuI CTGAAG 2 cut(s) 621, 716
AcyI GRCGYC 1 cut(s) 446
AdeI CACNNNGTG 2 cut(s) 109, 217
AfiI CCNNNNNNNGG 7 cut(s) 129, 340, 564, 605, 637, 667, 730
AgeI ACCGGT 1 cut(s) 385
AgsI TTSAA 2 cut(s) 194, 527
AjnI CCWGG 1 cut(s) 723
AloI GAACNNNNNNTCC 2 cut(s) 236, 268
AluBI AGCT 4 cut(s) 116, 147, 277, 700
AluI AGCT 4 cut(s) 116, 147, 277, 700
Alw21I GWGCWC 1 cut(s) 118
AlwI GGATC 2 cut(s) 40, 270
AlwNI CAGNNNCTG 1 cut(s) 318
Ama87I CYCGRG 1 cut(s) 662
AoxI GGCC 4 cut(s) 85, 315, 587, 596
ApeKI GCWGC 4 cut(s) 52, 172, 475, 493
AsiGI ACCGGT 1 cut(s) 385
AspLEI GCGC 2 cut(s) 93, 172
AspS9I GGNCC 6 cut(s) 85, 247, 315, 587, 596, 721
AsuHPI GGTGA 1 cut(s) 91
AvaI CYCGRG 1 cut(s) 662
AvaII GGWCC 2 cut(s) 247, 721
BanI GGYRCC 1 cut(s) 297
BanII GRGCYC 2 cut(s) 118, 238
Bbv12I GWGCWC 1 cut(s) 118
BbvI GCAGC 4 cut(s) 39, 159, 462, 505
BccI CCATC 5 cut(s) 464, 536, 640, 677, 701
BceAI ACGGC 1 cut(s) 671
BciT130I CCWGG 1 cut(s) 725
BfmI CTRYAG 1 cut(s) 173
BfoI RGCGCY 1 cut(s) 173
BfuAI ACCTGC 1 cut(s) 382
BglI GCCNNNNNGGC 1 cut(s) 595
BisI GCNGC 6 cut(s) 53, 173, 224, 476, 494, 510
BlsI GCNGC 6 cut(s) 54, 174, 225, 477, 495, 511
Bme1390I CCNGG 1 cut(s) 725
Bme18I GGWCC 2 cut(s) 247, 721
BmeT110I CYCGRG 1 cut(s) 662
BmgT120I GGNCC 6 cut(s) 85, 247, 315, 587, 596, 721
BmiI GGNNCC 4 cut(s) 299, 412, 659, 735
BmrFI CCNGG 1 cut(s) 725
BmsI GCATC 1 cut(s) 370
BoxI GACNNNNGTC 1 cut(s) 560
BpmI CTGGAG 1 cut(s) 299
BsaHI GRCGYC 1 cut(s) 446
BsaJI CCNNGG 3 cut(s) 301, 334, 724
BsaWI WCCGGW 2 cut(s) 249, 385
BsaXI ACNNNNNCTCC 4 cut(s) 236, 266, 266, 296
Bsc4I CCNNNNNNNGG 7 cut(s) 129, 340, 564, 605, 637, 667, 730
Bse118I RCCGGY 2 cut(s) 385, 421
Bse1I ACTGG 2 cut(s) 414, 582
BseBI CCWGG 1 cut(s) 725
BseDI CCNNGG 3 cut(s) 301, 334, 724
BseGI GGATG 3 cut(s) 409, 469, 688
BseLI CCNNNNNNNGG 7 cut(s) 129, 340, 564, 605, 637, 667, 730
BseNI ACTGG 2 cut(s) 414, 582
BseRI GAGGAG 2 cut(s) 650, 680
BseXI GCAGC 4 cut(s) 39, 159, 462, 505
BseYI CCCAGC 1 cut(s) 139
BsgI GTGCAG 2 cut(s) 38, 410
BshFI GGCC 4 cut(s) 87, 317, 589, 598
BshNI GGYRCC 1 cut(s) 297
BshTI ACCGGT 1 cut(s) 385
BsiHKAI GWGCWC 1 cut(s) 118
BsiHKCI CYCGRG 1 cut(s) 662
BsiSI CCGG 4 cut(s) 250, 386, 422, 461
BslI CCNNNNNNNGG 7 cut(s) 129, 340, 564, 605, 637, 667, 730
BsnI GGCC 4 cut(s) 87, 317, 589, 598
BsoBI CYCGRG 1 cut(s) 662
Bsp1286I GDGCHC 2 cut(s) 118, 238
Bsp143I GATC 2 cut(s) 45, 262
Bsp19I CCATGG 2 cut(s) 301, 334
BspACI CCGC 5 cut(s) 14, 50, 223, 226, 509
BspANI GGCC 4 cut(s) 87, 317, 589, 598
BspLI GGNNCC 4 cut(s) 299, 412, 659, 735
BspMAI CTGCAG 1 cut(s) 177
BspMI ACCTGC 1 cut(s) 382
BspPI GGATC 2 cut(s) 40, 270
BspT107I GGYRCC 1 cut(s) 297
BsrFI RCCGGY 2 cut(s) 385, 421
BsrI ACTGG 2 cut(s) 414, 582
BssAI RCCGGY 2 cut(s) 385, 421
BssECI CCNNGG 3 cut(s) 301, 334, 724
BssMI GATC 2 cut(s) 45, 262
BssNI GRCGYC 1 cut(s) 446
BssT1I CCWWGG 2 cut(s) 301, 334
Bst2UI CCWGG 1 cut(s) 725
Bst4CI ACNGT 2 cut(s) 26, 373
BstACI GRCGYC 1 cut(s) 446
BstAPI GCANNNNNTGC 1 cut(s) 109
BstC8I GCNNGC 2 cut(s) 89, 114
BstDEI CTNAG 1 cut(s) 636
BstDSI CCRYGG 2 cut(s) 301, 334
BstENI CCTNNNNNAGG 2 cut(s) 665, 728
BstF5I GGATG 3 cut(s) 409, 469, 688
BstH2I RGCGCY 1 cut(s) 173
BstHHI GCGC 2 cut(s) 93, 172
BstKTI GATC 2 cut(s) 48, 265
BstMBI GATC 2 cut(s) 45, 262
BstMWI GCNNNNNNNGC 2 cut(s) 109, 595
BstNI CCWGG 1 cut(s) 725
BstPAI GACNNNNGTC 1 cut(s) 560
BstSCI CCNGG 1 cut(s) 723
BstSFI CTRYAG 1 cut(s) 173
BstV1I GCAGC 4 cut(s) 39, 159, 462, 505
BstX2I RGATCY 2 cut(s) 45, 262
BstYI RGATCY 2 cut(s) 45, 262
BsuRI GGCC 4 cut(s) 87, 317, 589, 598
BtgI CCRYGG 2 cut(s) 301, 334
BtsCI GGATG 3 cut(s) 409, 469, 688
BtsIMutI CAGTG 1 cut(s) 31
BveI ACCTGC 1 cut(s) 382
Cac8I GCNNGC 2 cut(s) 89, 114
CaiI CAGNNNCTG 1 cut(s) 318
CfoI GCGC 2 cut(s) 93, 172
Cfr10I RCCGGY 2 cut(s) 385, 421
Cfr13I GGNCC 6 cut(s) 85, 247, 315, 587, 596, 721
CseI GACGC 1 cut(s) 435
CspAI ACCGGT 1 cut(s) 385
CviAII CATG 2 cut(s) 302, 335
DdeI CTNAG 1 cut(s) 636
DpnI GATC 2 cut(s) 47, 264
DpnII GATC 2 cut(s) 45, 262
DraIII CACNNNGTG 2 cut(s) 109, 217
DrdI GACNNNNNNGTC 1 cut(s) 544
DseDI GACNNNNNNGTC 1 cut(s) 544
EciI GGCGGA 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 116
Eco130I CCWWGG 2 cut(s) 301, 334
Eco24I GRGCYC 2 cut(s) 118, 238
Eco47I GGWCC 2 cut(s) 247, 721
Eco53kI GAGCTC 1 cut(s) 116
Eco57I CTGAAG 2 cut(s) 621, 716
Eco88I CYCGRG 1 cut(s) 662
EcoICRI GAGCTC 1 cut(s) 116
EcoNI CCTNNNNNAGG 2 cut(s) 665, 728
EcoO109I RGGNCCY 3 cut(s) 85, 315, 721
EcoRII CCWGG 1 cut(s) 723
EcoT14I CCWWGG 2 cut(s) 301, 334
EcoT38I GRGCYC 2 cut(s) 118, 238
ErhI CCWWGG 2 cut(s) 301, 334
FaeI CATG 2 cut(s) 305, 338
FaiI YATR 6 cut(s) 70, 101, 200, 291, 303, 336
FatI CATG 2 cut(s) 301, 334
FauI CCCGC 2 cut(s) 57, 219
Fnu4HI GCNGC 6 cut(s) 53, 173, 224, 476, 494, 510
FokI GGATG 3 cut(s) 416, 476, 695
FriOI GRGCYC 2 cut(s) 118, 238
Fsp4HI GCNGC 6 cut(s) 53, 173, 224, 476, 494, 510
FspI TGCGCA 1 cut(s) 92
GlaI GCGC 2 cut(s) 92, 171
GluI GCNGC 6 cut(s) 53, 173, 224, 476, 494, 510
GsaI CCCAGC 1 cut(s) 143
GsuI CTGGAG 1 cut(s) 299
HaeII RGCGCY 1 cut(s) 173
HaeIII GGCC 4 cut(s) 87, 317, 589, 598
HapII CCGG 4 cut(s) 250, 386, 422, 461
HgaI GACGC 1 cut(s) 435
HhaI GCGC 2 cut(s) 93, 172
Hin1I GRCGYC 1 cut(s) 446
Hin1II CATG 2 cut(s) 305, 338
Hin6I GCGC 2 cut(s) 91, 170
HinP1I GCGC 2 cut(s) 91, 170
HincII GTYRAC 2 cut(s) 369, 537
HindII GTYRAC 2 cut(s) 369, 537
HindIII AAGCTT 2 cut(s) 145, 698
HinfI GANTC 2 cut(s) 208, 398
HpaII CCGG 4 cut(s) 250, 386, 422, 461
HphI GGTGA 1 cut(s) 91
Hpy166II GTNNAC 4 cut(s) 369, 397, 537, 575
Hpy188I TCNGA 5 cut(s) 120, 240, 262, 403, 696
Hpy188III TCNNGA 1 cut(s) 212
Hpy8I GTNNAC 4 cut(s) 369, 397, 537, 575
Hpy99I CGWCG 2 cut(s) 262, 657
HpyAV CCTTC 3 cut(s) 76, 596, 724
HpyCH4III ACNGT 2 cut(s) 26, 373
HpyCH4IV ACGT 4 cut(s) 108, 186, 196, 691
HpyCH4V TGCA 6 cut(s) 55, 103, 175, 312, 383, 391
HpyF10VI GCNNNNNNNGC 2 cut(s) 109, 595
HpyF3I CTNAG 1 cut(s) 636
HpySE526I ACGT 4 cut(s) 108, 186, 196, 691
Hsp92I GRCGYC 1 cut(s) 446
Hsp92II CATG 2 cut(s) 305, 338
HspAI GCGC 2 cut(s) 91, 170
Kzo9I GATC 2 cut(s) 45, 262
LmnI GCTCC 2 cut(s) 274, 663
Lsp1109I GCAGC 4 cut(s) 39, 159, 462, 505
LweI GCATC 1 cut(s) 370
MaeII ACGT 4 cut(s) 108, 186, 196, 691
MaeIII GTNAC 2 cut(s) 323, 350
MalI GATC 2 cut(s) 47, 264
MboI GATC 2 cut(s) 45, 262
MboII GAAGA 1 cut(s) 479
MflI RGATCY 2 cut(s) 45, 262
MhlI GDGCHC 2 cut(s) 118, 238
MluCI AATT 2 cut(s) 520, 527
MlyI GAGTC 1 cut(s) 392
MmeI TCCRAC 1 cut(s) 240
MslI CAYNNNNRTG 1 cut(s) 98
MspA1I CMGCKG 1 cut(s) 52
MspI CCGG 4 cut(s) 250, 386, 422, 461
MspR9I CCNGG 1 cut(s) 725
MvaI CCWGG 1 cut(s) 725
MwoI GCNNNNNNNGC 2 cut(s) 109, 595
NcoI CCATGG 2 cut(s) 301, 334
NdeII GATC 2 cut(s) 45, 262
NlaIII CATG 2 cut(s) 305, 338
NlaIV GGNNCC 4 cut(s) 299, 412, 659, 735
NmuCI GTSAC 1 cut(s) 350
NsbI TGCGCA 1 cut(s) 92
PaeR7I CTCGAG 1 cut(s) 662
PaqCI CACCTGC 1 cut(s) 382
PfeI GAWTC 1 cut(s) 208
PinAI ACCGGT 1 cut(s) 385
PkrI GCNGC 6 cut(s) 54, 174, 225, 477, 495, 511
PleI GAGTC 1 cut(s) 392
PpsI GAGTC 1 cut(s) 392
PpuMI RGGWCCY 1 cut(s) 721
PshAI GACNNNNGTC 1 cut(s) 560
Psp124BI GAGCTC 1 cut(s) 118
Psp5II RGGWCCY 1 cut(s) 721
Psp6I CCWGG 1 cut(s) 723
PspFI CCCAGC 1 cut(s) 139
PspGI CCWGG 1 cut(s) 723
PspN4I GGNNCC 4 cut(s) 299, 412, 659, 735
PspPI GGNCC 6 cut(s) 85, 247, 315, 587, 596, 721
PspPPI RGGWCCY 1 cut(s) 721
PspXI VCTCGAGB 1 cut(s) 662
PstI CTGCAG 1 cut(s) 177
PstNI CAGNNNCTG 1 cut(s) 318
PsuI RGATCY 2 cut(s) 45, 262
RseI CAYNNNNRTG 1 cut(s) 98
SacI GAGCTC 1 cut(s) 118
SatI GCNGC 6 cut(s) 53, 173, 224, 476, 494, 510
Sau3AI GATC 2 cut(s) 45, 262
Sau96I GGNCC 6 cut(s) 85, 247, 315, 587, 596, 721
SchI GAGTC 1 cut(s) 392
ScrFI CCNGG 1 cut(s) 725
SduI GDGCHC 2 cut(s) 118, 238
SfaNI GCATC 1 cut(s) 370
SfcI CTRYAG 1 cut(s) 173
SfiI GGCCNNNNNGGCC 1 cut(s) 595
Sfr274I CTCGAG 1 cut(s) 662
SgrAI CRCCGGYG 1 cut(s) 385
SinI GGWCC 2 cut(s) 247, 721
SlaI CTCGAG 1 cut(s) 662
SmiMI CAYNNNNRTG 1 cut(s) 98
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 2 cut(s) 520, 527
SsiI CCGC 5 cut(s) 14, 50, 223, 226, 509
SstI GAGCTC 1 cut(s) 118
StyD4I CCNGG 1 cut(s) 723
StyI CCWWGG 2 cut(s) 301, 334
TaaI ACNGT 2 cut(s) 26, 373
TaiI ACGT 4 cut(s) 111, 189, 199, 694
TaqI TCGA 3 cut(s) 63, 159, 663
TaqII GACCGA 1 cut(s) 554
TasI AATT 2 cut(s) 520, 527
TauI GCSGC 2 cut(s) 226, 512
TfiI GAWTC 1 cut(s) 208
TscAI CASTG 1 cut(s) 31
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 4 cut(s) 52, 172, 475, 493
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 3 cut(s) 275, 480, 609
TspGWI ACGGA 1 cut(s) 518
TspRI CASTG 1 cut(s) 31
VpaK11BI GGWCC 2 cut(s) 247, 721
XagI CCTNNNNNAGG 2 cut(s) 665, 728
XcmI CCANNNNNNNNNTGG 1 cut(s) 421
XhoI CTCGAG 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.